BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G53310.1
Length=3204
Score E
Sequences producing significant alignments: (Bits) Value
Ahg474459 jgi|Araly1|474459|fgenesh2_kg.1__4413__AT1G53310.2 5038 0.0
Ahg478917 jgi|Araly1|478917|fgenesh2_kg.3__1618__AT3G14940.1 3037 0.0
Ahg935146 jgi|Araly1|935146|scaffold_403134.1 1650 0.0
> Ahg474459 jgi|Araly1|474459|fgenesh2_kg.1__4413__AT1G53310.2
Length=3192
Score = 5038 bits (2728), Expect = 0.0
Identities = 3006/3140 (96%), Gaps = 19/3140 (1%)
Strand=Plus/Plus
Query 64 AAAATGGCGAATCGGAAGTTAGAGAAGATGGCATCGATTGATGTTCATCTTCGTCAACTG 123
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 72 AAAATGGCGTATCGGAAGTTAGAGAAGATGGCATCAATTGATGTTCATCTTCGTCAACTG 131
Query 124 GTTCCTGGCAAAGTTAGTGAAGACGACAAGCTTGTTGAGTATGATGCTTTGCTTCTAGAT 183
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 GTTCCTGGTAAAGTTAGTGAAGACGACAAGCTTGTTGAGTATGATGCTTTGCTTCTAGAT 191
Query 184 CGGTTTCTCGATATCCTCCAGGATTTGCACGGTGAAGATCTCCGTGAAACTGTTCAAGAG 243
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 192 CGGTTTCTCGATATTCTCCAGGATTTGCACGGTGAAGATCTCCGTGAAACTGTTCAAGAG 251
Query 244 CTTTATGAGCATTCTGCAGAATACGAAGGGAAGCATGAACCTAAGAAGCTAGAGGAGCTA 303
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 252 CTTTATGAGCATTCTGCAGAATATGAAGGAAAGCATGAACCTAAGAAGCTAGAGGAGCTA 311
Query 304 GGGAGTGTGCTAACGAGTTTAGATCCAGGAGATTCCATTGTTATCGCTAAAGCTTTCTCT 363
|| | | ||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 312 GGAAATTTGCTAACGAGTTTAGATCCAGGAGACTCCATTGTTATCGCTAAAGCTTTTTCT 371
Query 364 CATATGCTTAACTTAGCCAATTTGGCTGAGGAAGTGCAGATTGCTTATCGCCGTAGGATC 423
|| ||||||||||||||||||||||| |||||||||||||||||||| || |||||||||
Sbjct 372 CACATGCTTAACTTAGCCAATTTGGCCGAGGAAGTGCAGATTGCTTACCGTCGTAGGATC 431
Query 424 AAGAAGCTGAAGAAAGGTGATTTTGTTGATGAGAGCTCTGCTACTACTGAATCTGATCTT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 432 AAGAAGCTGAAGAAAGGTGATTTTGTTGATGAGAGCTCTGCTACTACTGAATCTGATCTT 491
Query 484 GAAGAAACTTTCAAGAAGCTTGTTGGAGATCTGAACAAGTCTCCTGAAGAGATCTTTGAT 543
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 492 GAAGAAACTTTCAAGAAGCTTGTTGGAGATCTGAATAAGTCTCCTCAAGAGATCTTTGAT 551
Query 544 GCTCTCAAGAATCAGACTGTGGATTTGGTTTTGACTGCTCATCCTACTCAGTCTGTGAGA 603
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 552 GCTCTGAAGAATCAGACTGTGGATTTGGTTTTGACTGCTCATCCTACTCAGTCTGTGAGA 611
Query 604 AGATCATTGCTTCAGAAACATGGGAGGATAAGAGACTGTCTGGCTCAACTATATGCTAAG 663
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 612 AGATCATTGCTTCAGAAACATGGGAGGATAAGAGACTGTCTGGCTCAACTTTATGCCAAG 671
Query 664 GATATTACTCCTGATGACAAGCAAGAGCTCGATGAGGCTCTTCAGAGAGAGATTCAAGCT 723
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 672 GATATTACTCCTGATGACAAGCAAGAGCTCGATGAGGCTCTTCAGAGAGAGATTCAAGCG 731
Query 724 GCATTCCGAACAGATGAAATCAAAAGAACACCACCTACTCCTCAAGATGAGATGAGAGCG 783
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 732 GCATTCCGAACAGATGAAATCAAAAGAACACCACCGACTCCTCAAGATGAGATGAGAGCA 791
Query 784 GGAATGAGTTATTTCCATGAAACTATCTGGAAAGGTGTTCCTAAGTTTCTGCGCCGTGTT 843
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 792 GGAATGAGTTATTTCCATGAAACTATCTGGAAAGGTGTTCCTAAGTTTCTTCGCCGTGTA 851
Query 844 GACACGGCTTTGAAAAACATAGGGATCGAAGAACGTGTTCCATATAATGCTCCATTGATT 903
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 852 GACACAGCTTTGAAAAACATAGGGATTGAAGAACGTGTTCCATATAATGCTCCATTGATT 911
Query 904 CAGTTCTCTTCTTGGATGGGTGGTGATCGTGACGGTAACCCAAGGGTTACACCTGAAGTC 963
|| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 912 CAATTCTCTTCTTGGATGGGTGGTGATCGTGATGGTAATCCAAGGGTTACACCTGAAGTC 971
Query 964 ACCAGAGATGTTTGCTTGTTAGCTAGAATGATGGCTGCTACTATGTACTTTAACCAAATC 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 972 ACCAGAGATGTTTGCTTGTTAGCTAGAATGATGGCTGCTACTATGTACTTTAACCAAATC 1031
Query 1024 GAAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGACGAGCTGCGTGCGCGAGCT 1083
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1032 GAAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGACGAGCTGCGTGTGCGAGCT 1091
Query 1084 GATGAAGTTCATGCAAATTCGAGGAAAGATGCTGCAAAACATTACATAGAATTCTGGAAG 1143
|||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1092 GATGAACTTCACGCAAATTCGAGAAAAGATGCTGCGAAACATTACATAGAATTCTGGAAG 1151
Query 1144 TCAATTCCTACAACTGAGCCATACCGTGTGATTCTTGGCGATGTAAGGGACAAGCTTTAT 1203
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152 TCAATTCCTACAACCGAGCCATACCGTGTGATTCTTGGCGATGTAAGGGACAAGCTTTAT 1211
Query 1204 CACACACGTGAACGCGCTCATCAACTGCTCAGCAATGGACACTCTGATGTCCCTGTAGAG 1263
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1212 CACACACGTGAACGCGCTCATCAATTGCTCAGCAATGGACACTCTGATGTCCCTGTAGAG 1271
Query 1264 GCTACTTTCATTAACTTGGAACAGTTCTTGGAACCTCTTGAGCTCTGTTACCGATCTCTG 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1272 GCTACTTTCATTAACTTGGAACAGTTCTTGGAACCTCTTGAGCTCTGTTACCGATCTCTG 1331
Query 1324 TGTTCATGTGGTGATCGTCCAATAGCAGATGGAAGCCTTCTTGATTTCTTGAGGCAAGTC 1383
||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1332 TGTTCATGTGGCGACCGTCCAATAGCAGATGGAAGCCTTCTTGATTTTTTGAGGCAAGTC 1391
Query 1384 TCAACCTTTGGGCTCTCTCTTGTGAGACTTGACATAAGGCAAGAATCTGACCGCCACACT 1443
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1392 TCAACCTTTGGGCTCTCTCTTGTGAGACTTGACATAAGGCAAGAATCTGACCGCCACACC 1451
Query 1444 GATGTATTGGATGCTATCACCACGCATTTAGATATCGGATCCTACAGAGAGTGGTCTGAA 1503
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1452 GATGTATTGGATGCTATCACCACACATTTAGATATCGGATCCTACAGAGAATGGTCTGAA 1511
Query 1504 GAACGCCGCCAAGAATGGCTTTTATCTGAGCTAAGTGGCAAACGTCCGCTTTTCGGTTCT 1563
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1512 GAACGTCGCCAAGAATGGCTTTTATCTGAGCTAAGTGGCAAACGTCCGCTTTTCGGTTCT 1571
Query 1564 GATCTTCCTAAAACCGAAGAAATAGCTGATGTTCTGGACACGTTTCATGTCATAGCCGAG 1623
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1572 GATCTTCCTAAAACCGAAGAAATAGCTGATGTTCTGGACACGTTTCATGTCATAGCAGAG 1631
Query 1624 CTACCAGCAGATAGCTTTGGTGCTTACATTATCTCTATGGCAACTGCACCTTCTGATGTA 1683
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1632 CTACCAGCAGACAGCTTTGGTGCTTACATTATCTCTATGGCAACTGCACCCTCTGATGTA 1691
Query 1684 TTAGCTGTTGAGCTTTTACAGCGTGAATGCCGAGTGAAACAGCCTTTGAGAGTTGTTCCG 1743
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1692 TTAGCTGTTGAGCTTTTACAGCGTGAATGCCGTGTGAAACAGCCTTTGAGAGTTGTTCCG 1751
Query 1744 CTCTTTGAGAAGCTAGCAGATCTGGAAGCAGCTCCTGCTGCAGTTGCTAGGCTCTTTTCT 1803
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1752 CTCTTTGAGAAGCTAGCGGATCTGGAAGCAGCTCCTGCTGCAGTTGCTAGGCTCTTTTCT 1811
Query 1804 GTTGATTGGTACAAAAACCGAATTAACGGTAAGCAAGAGGTTATGATTGGTTATTCGGAT 1863
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1812 GTTGATTGGTACAAGAACCGTATTAACGGTAAGCAAGAGGTTATGATTGGTTATTCGGAT 1871
Query 1864 TCAGGAAAAGATGCTGGACGGTTATCTGCTGCTTGGCAGTTATACAAAGCTCAAGAAGAG 1923
||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1872 TCAGGGAAAGACGCTGGACGGTTATCCGCTGCTTGGCAGTTATACAAAGCTCAAGAAGAG 1931
Query 1924 CTTGTGAAGGTTGCTAAAGAGTACGGTGTGAAGCTAACAATGTTTCACGGTCGTGGTGGC 1983
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1932 CTTGTGAAGGTTGCTAAAGAGTACGGTGTGAAGCTAACAATGTTTCACGGTCGTGGTGGT 1991
Query 1984 ACGGTCGGAAGAGGAGGTGGACCAACCCATCTTGCTATATTGTCTCAGCCTCCGGATACT 2043
||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1992 ACGGTTGGAAGAGGAGGCGGACCGACCCATCTTGCTATATTGTCTCAGCCTCCGGATACT 2051
Query 2044 ATTAACGGTTCCCTCCGTGTCACAGTTCAAGGTGAAGTCATCGAGCAATCGTTTGGTGAA 2103
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2052 ATTAACGGTTCGCTCCGTGTCACGGTTCAAGGTGAAGTCATCGAGCAATCGTTTGGTGAA 2111
Query 2104 GAGCACTTATGCTTTAGAACACTTCAGCGTTTCACAGCTGCTACACTCGAGCACGGTATG 2163
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2112 GAGCATTTATGCTTTAGAACACTTCAGCGTTTCACCGCTGCTACACTCGAGCACGGTATG 2171
Query 2164 CGTCCTCCAATTTCGCCTAAACCAGAATGGCGCGCTTTGCTGGATGAAATGGCGGTTGTT 2223
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 2172 CGTCCTCCAATTTCGCCTAAACCAGAATGGCGCGCTTTGCTTGATGAAATGGCGGTCGTT 2231
Query 2224 GCAACCGAGGAGTATCGCTCAGTTGTGTTCCAAGAACCTCGGTTTGTCGAGTACTTCCGC 2283
||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 2232 GCAACAGAGGAGTATCGTTCTGTTGTGTTCCAAGAACCTCGGTTTGTCGAGTACTTCCGC 2291
Query 2284 CTCGCTACACCGGAACTGGAGTATGGACGTATGAATATCGGAAGCAGACCTTCGAAGCGT 2343
|| |||||||||||||| |||||||| |||||||| || |||||||||||||||||||||
Sbjct 2292 CTTGCTACACCGGAACTAGAGTATGGTCGTATGAACATTGGAAGCAGACCTTCGAAGCGT 2351
Query 2344 AAACCAAGCGGTGGCATTGAATCTCTCCGTGCAATTCCATGGATCTTCGCTTGGACTCAA 2403
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2352 AAACCAAGTGGTGGCATTGAATCTCTCCGTGCTATTCCATGGATCTTCGCTTGGACTCAA 2411
Query 2404 ACAAGATTCCATCTTCCTGTATGGCTTGGATTCGGATCAGCAATTAGACATGTGATCGAA 2463
|||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct 2412 ACAAGATTCCATCTCCCTGTATGGCTTGGATTTGGATCAGCGATTAGACACGTGATCGAA 2471
Query 2464 AAAGACGTCAGGAACCTCCATATGCTCCAAGATATGTACCAACACTGGCCTTTCTTTAGA 2523
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2472 AAAGATGTCAAGAACCTCCATATGCTCCAAGATATGTACCAACACTGGCCTTTCTTTAGA 2531
Query 2524 GTCACCATTGATCTAATCGAAATGGTGTTCGCTAAAGGAGATCCTGGTATTGCTGCTTTG 2583
|||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||
Sbjct 2532 GTCACCATTGATCTCATTGAAATGGTGTTCGCTAAAGGAGATCCCGGGATTGCTGCTTTG 2591
Query 2584 TACGATAAGCTTCTTGTTTCAGAGGAACTCTGGCCTTTTGGTGAGAAACTCAGAGCTAAC 2643
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2592 TACGATAAGCTTCTTGTTTCAGAGGAACTCTGGCCTTTTGGTGAGAAACTCAGAGCTAAT 2651
Query 2644 TTCGAAGAAACCAAGAAACTCATCCTCCAGACCGCTGGACACAAAGATCTTCTTGAAGGT 2703
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2652 TTCGAAGAAACCAAGAAACTCATCCTGCAGACCGCTGGACACAAAGATCTTCTTGAAGGA 2711
Query 2704 GATCCTTACTTGAAACAGAGACTGAGACTTCGTGATTCTTACATTACAACTCTCAATGTC 2763
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 2712 GATCCTTACTTGAAACAGAGACTGAGACTCCGTGATTCTTACATTACGACTCTCAATGTC 2771
Query 2764 TGTCAAGCTTACACATTGAAGAGAATCCGTGATCCGAGTTACCATGTGACTCTGCGACCA 2823
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2772 TGTCAAGCTTACACATTGAAGAGAATCCGTGATCCAAGTTACCATGTGACTCTGCGACCT 2831
Query 2824 CACATTTCTAAGGAGATAGCGGAATCGAGCAAACCAGCAAAAGAACTCATCGAGCTTAAC 2883
||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2832 CACATCTGTAAGGAGATAGCGGAATCGAGCAAACCAGCACAAGAACTCATCGAGCTTAAC 2891
Query 2884 CCGACTAGCGAATACGCGCCAGGACTTGAAGATACACTCATCTTGACGATGAAGGGTATT 2943
||||| |||||||| || || |||||||||||||| ||||||||||| ||||||||||||
Sbjct 2892 CCGACGAGCGAATATGCACCTGGACTTGAAGATACTCTCATCTTGACCATGAAGGGTATT 2951
Query 2944 GCTGCTGGTCTACAAAACACCGGTTAAGCTACAAAGAGATGGTTAAACAAACTTTGAAtc 3003
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct 2952 GCTGCTGGTCTACAAAACACCGGTTAAGTTACAAAGAGATGATTAAACAAACTTTGAGTC 3011
Query 3004 tctctttctctctcaagtctctcCtttttttAACTACAGATTTGGAAAATAAGGTTGGAT 3063
|||| || | || | | | ||| |||||| ||||||||||||||||||||||
Sbjct 3012 TCTC---CT-T-TC---T-T-T--TTT----AACTACGGATTTGGAAAATAAGGTTGGAT 3055
Query 3064 TCTGGTTTATTTTATGTATCCACCGTCAAAATGTTGATTTTCGTGTACGAGTACTTCGAG 3123
|||||||||||| ||||||||||||||||| ||||||||||| | ||||| | ||| |||
Sbjct 3056 TCTGGTTTATTT-ATGTATCCACCGTCAAA-TGTTGATTTTCTTTTACGAATCCTTGGAG 3113
Query 3124 ATCATTGAACACATGCTCTGtttttttCTCAAGTTTAATAAAACAGAACAAGAGAATCTT 3183
|| || | |||| |||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 3114 ATTAT-GCACACCTGCTCTGTTTTTTTCTTAAGTGTAATAAAACAGAACAAGAGAATCTT 3172
Query 3184 TTCTTGTTTATTTTCTTATC 3203
||||||||| ||||||||||
Sbjct 3173 TTCTTGTTTCTTTTCTTATC 3192
> Ahg478917 jgi|Araly1|478917|fgenesh2_kg.3__1618__AT3G14940.1
Length=3200
Score = 3037 bits (1644), Expect = 0.0
Identities = 2513/2934 (86%), Gaps = 53/2934 (2%)
Strand=Plus/Plus
Query 66 AATGGCGAATCGGAAGTTAGAGAAGATGGCATCGATTGATGTTCATCTTCGTCAACTGGT 125
||||||| |||||| |||||||||||||||| ||||||| ||| ||||| ||||| ||
Sbjct 44 AATGGCGGGTCGGAACATAGAGAAGATGGCATCAATTGATGCTCAGCTTCGGCAACTCGT 103
Query 126 TCCTGGC-AAAGTTAGTGAAGACGACAAGCTTGTTGAGTATGATGCT-TTGCTTCTAGAT 183
|||| || ||||| ||||||||||| |||||||||||||| |||||| || || || |||
Sbjct 104 TCCT-GCTAAAGTCAGTGAAGACGATAAGCTTGTTGAGTACGATGCTCTT-CTCCTCGAT 161
Query 184 CGGTTTCTCGATATCCTCCAGGATTTGCACGGTGAAGATCTCCGTGAAACTGTTCAAGAG 243
|| |||||||| || ||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct 162 CGCTTTCTCGACATTCTCCAGGATTTACACGGCGAGGATCTCCGTGAAACCGTTCAAGAG 221
Query 244 CTTTATGAGCATTCTGCAGAATACGAAGGGAAGCATGAACCTAAGAAGCTAGAGGAGCTA 303
|| || |||| |||||| || || |||||||||| ||| ||| ||||||| |||||||||
Sbjct 222 CTATACGAGCTTTCTGCTGAGTATGAAGGGAAGCGTGAGCCTGAGAAGCTTGAGGAGCTA 281
Query 304 GGGAGTGTGCTAACGAGTTTAGATCCAGGAGATTCCATTGTTATCGCTAAAGCTTTCTCT 363
|||||||| ||||||||||| ||||| || || |||||||||||| | || |||||||||
Sbjct 282 GGGAGTGTCCTAACGAGTTTGGATCCTGGTGACTCCATTGTTATCTCCAAGGCTTTCTCT 341
Query 364 CATATGCTTAACTTAGCCAATTTGGCTGAGGAAGTGCAGATTGCTTATCGCCGTAGGATC 423
|| ||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||
Sbjct 342 CACATGCTTAACTTAGCCAATTTGGCCGAGGAAGTGCAGATTGCTCACCGCCGCAGGATC 401
Query 424 AAGAAGCTGAAGAAAGGTGATTTTGTTGATGAGAGCTCTGCTACTACTGAATCTGATCTT 483
|||||| ||||||| |||||||| ||||||||||| ||||| ||||||||||| ||| |
Sbjct 402 AAGAAGTTGAAGAAGGGTGATTTCGTTGATGAGAGTTCTGCAACTACTGAATCCGATATC 461
Query 484 GAAGAAACTTTCAAGAAG-CTTG-TTGGAGATC-TGAACAAGTCTCCTGAAGAGATCTTT 540
||||| ||||| ||| || || | || | |||| || |||||||||||||||||||||
Sbjct 462 GAAGAGACTTTTAAG-AGACTCGTTTCG-GATCTTG-GTAAGTCTCCTGAAGAGATCTTT 518
Query 541 GATG-CTCTCAAGAATCAGACTGTGGATTTGGTTTTGACTGCTCATCCTACTCAGTCTGT 599
|||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATGCCT-TGAAGAATCAGACTGTGGATTTGGTTTTGACTGCTCATCCTACTCAGTCTGT 577
Query 600 GAGAAGATCATTGCTTCAGAAACATGGGAGGATAAGAGACTGTCTGGCTCAACTATATGC 659
| | ||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||
Sbjct 578 GCGTAGATCATTGCTTCAGAAGCATGGGAGGATAAGGGACTGTCTTGCTCAACTGTATGC 637
Query 660 TAAGGATATTACTCCTGATGACAAGCAAGAGCTCGATGAGGCTCTTCAGAGAGAGATTCA 719
||||| |||||||||||||||||||| |||||||||||| |||| || |||||||||||
Sbjct 638 AAAGGACATTACTCCTGATGACAAGCAGGAGCTCGATGAGTCTCTGCAAAGAGAGATTCA 697
Query 720 AGCTGCATTCCGAACAGATGAAATCAAAAGAACACCACCTACTCCTCAAGATGAGATGAG 779
||||||||||||||||||||| || | ||||||||| || || || |||||||| |||||
Sbjct 698 AGCTGCATTCCGAACAGATGAGATTAGAAGAACACCTCCAACCCCGCAAGATGAAATGAG 757
Query 780 AGCGGGAATGAGTTATTTCCATGAAACTATCTGGAAAGGTGTTCCTAAGTTTCT-GCGCC 838
||| ||||||||||||||||| || || |||||||||||||| || ||||| || |||||
Sbjct 758 AGCTGGAATGAGTTATTTCCACGAGACAATCTGGAAAGGTGTCCCCAAGTT-CTTGCGCC 816
Query 839 GTGTTGACACGGCTTTGAAAAACATAGGGATCGAAGAACGTGTTCCATATAATGCTCCAT 898
|||| ||||| ||| |||||||||| ||||| || ||||||||||| || ||||| ||||
Sbjct 817 GTGTGGACACAGCTCTGAAAAACATCGGGATTGATGAACGTGTTCCTTACAATGCCCCAT 876
Query 899 TGATTCAGTTCTCTTCTTGGATGGGTGGTGATCGTGACGGTAACCCAAGGGTTACACCTG 958
||||||| |||||||| |||||||| ||||||||||| ||||| || ||||| |||||||
Sbjct 877 TGATTCAATTCTCTTCATGGATGGGCGGTGATCGTGATGGTAATCCGAGGGTCACACCTG 936
Query 959 AAGTCACCAGAGATGTTTGCTTGTTAGCTAGAATGATGGCTGCTACTATGTACTTTAACC 1018
| ||||| |||||||| |||||| | ||||||||||||||||| | | | |||| |||||
Sbjct 937 AGGTCACTAGAGATGTGTGCTTGCTGGCTAGAATGATGGCTGCCAATCTCTACTATAACC 996
Query 1019 AAATCGAAGA-TCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGACGAGCTGCGTG-C 1076
||||||| || ||| ||||||||| |||||||||||||||||| ||| ||| | |||| |
Sbjct 997 AAATCGA-GAATCTGATGTTTGAGTTGTCTATGTGGCGTTGCACTGATGAGTTCCGTGTC 1055
Query 1077 GCGAGCTGATGAAGTTCAT-GCAAATTCGAGGAAAGATGCTGCAAAACATTACATAGAAT 1135
|| || |||||| | || | || | | |||||||||||||||||||||||||||||||
Sbjct 1056 -CGGGCGGATGAACTCCACAGGAACT-CAAGGAAAGATGCTGCAAAACATTACATAGAAT 1113
Query 1136 TCTGGAAGTCAATTCCTACAACTGAGCCATACCGTGTGATTCTTGGCGATGTAAGGGACA 1195
| |||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||| |
Sbjct 1114 TTTGGAAGACAATTCCTCCAACTGAGCCATACCGTGTGATTCTTGGTGATGTGAGGGATA 1173
Query 1196 AGCTTTATCACACACGTGAACGCGCTCATCAACTGCTCAGCAATGGACA-CTCTGATGTC 1254
|||| |||||||||||||| || ||| |||| |||| || || ||| | ||| || ||
Sbjct 1174 AGCTGTATCACACACGTGAGCGTTCTCGTCAATTGCTGAGTAACGGA-ATCTCGGACATC 1232
Query 1255 CCTGTAGAGGCTACTTTCATTAACT-TGGAACAGTTCTTGGAACCTCTTGAGCTCTGTTA 1313
|| | ||| || ||||||| || | |||||||||||||||| |||||||||||||||||
Sbjct 1233 CCCGAAGAAGCAACTTTCACCAA-TGTGGAACAGTTCTTGGAGCCTCTTGAGCTCTGTTA 1291
Query 1314 CCGATCTCTGTGTTCATGTGGTGATCGTCCAATAGCAGATGGAAGCCTTCTTGATTTCTT 1373
|||||| || |||||||||||||| || || ||||| |||||||||||||||||||||||
Sbjct 1292 CCGATCGCTATGTTCATGTGGTGACCGCCCGATAGCTGATGGAAGCCTTCTTGATTTCTT 1351
Query 1374 GAGGCAAGTCTCAACCTTTGGGCTCTCTCTTGTGAGACTTGACATAAGGCAAGAATCTGA 1433
|||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| |||||
Sbjct 1352 GAGGCAAGTCTCTACCTTTGGACTCTCCCTTGTGAGACTTGACATCAGGCAAGAGTCTGA 1411
Query 1434 CCGCCACACTGATGTATTGGATGCTATCACCACGCATTTAGATATCGGATCCTAC-AGAG 1492
|||||||| ||||| |||||||||||||||| ||| || || ||||| |||| | | ||
Sbjct 1412 ACGCCACACAGATGTCTTGGATGCTATCACCAAGCACTTGGACATCGGTTCCTCCTATAG 1471
Query 1493 AG--TGGTCTGAAGAACGCCGCCAAGAATGGCTTTTATCTGAGCTAAGTGGCAAACGTCC 1550
|| |||||||||||| | || || ||||||||| | |||| ||||| ||||| |||||
Sbjct 1472 AGACTGGTCTGAAGAAGGTCGACAGGAATGGCTTCTGGCTGAACTAAGCGGCAAGCGTCC 1531
Query 1551 GCTTTTCGGTTCTGATCTTCCTAAAACCGAAGAAATAGCTGATGTTCTGGACACGTTTCA 1610
|||||||| |||||||||| |||||||||||||| ||||||| |||||||| || ||
Sbjct 1532 ACTTTTCGGACCTGATCTTCCCAAAACCGAAGAAATTTCTGATGTCCTGGACACATT-CA 1590
Query 1611 T-GTCATAGCCGAGCTACCAGCAGATAGCTTTGGTGCTTACATTATCTCTATGGCAACTG 1669
|| ||| | ||||| || ||||| | ||||| ||||||||||||||||||||||||
Sbjct 1591 AAGTTATATCTGAGCTGCCTTCAGATTGTTTTGGAGCTTACATTATCTCTATGGCAACTT 1650
Query 1670 CACCTTCTGATGTA-TTAGCTGTTGAGCTTTTACAGCGTGAATGCCGA-GTGAAACAGCC 1727
||||| |||||| || || ||||||||||||||||||||||||| | |||||| | ||
Sbjct 1651 CACCTAGTGATGTGCTT-GCGGTTGAGCTTTTACAGCGTGAATGCC-ATGTGAAAAATCC 1708
Query 1728 TTTGAGAGTTGTTCCGCTCTTTGAGAAGCTAGCAGATCTGGAAGCAGCTCCTGCTGCAGT 1787
| ||||||||||| ||||||||||||||||| ||||| |||||||||||||| || ||
Sbjct 1709 ACTAAGAGTTGTTCCACTCTTTGAGAAGCTAGCTGATCTTGAAGCAGCTCCTGCCGCTGT 1768
Query 1788 TGCTAGGCTCTTTTCTGTTGATTGGTACAAAAACCGAATTAACGGTAAGCAAGAGGTTAT 1847
||| || ||||||||| | || |||||||||||||| ||||||||||| |||||||||||
Sbjct 1769 TGCAAGACTCTTTTCTATAGACTGGTACAAAAACCGTATTAACGGTAAACAAGAGGTTAT 1828
Query 1848 GATTGGTTATTCGGATTCAGGAAAAGATGCTGGACGG-TTATCTGCTGCTTGGCAG-TTA 1905
||||||||| || |||||||| ||||||||||| || || || ||||||||| || ||
Sbjct 1829 GATTGGTTACTCAGATTCAGGGAAAGATGCTGGGCGTCTT-TCAGCTGCTTGGGAGCTT- 1886
Query 1906 TACAAAGCTCAAGAAGAGCTTGTGAAGGTTGCTAAAGAGTACGGTGTGAAGCTAACAATG 1965
||||||||||||||||||||||||||||||||||| || || || ||||||||||| |||
Sbjct 1887 TACAAAGCTCAAGAAGAGCTTGTGAAGGTTGCTAAGGAATATGGAGTGAAGCTAACTATG 1946
Query 1966 TTTCACGGTCGTGGTGGCACGGTCGGAAGAGGAGGTGGACCAACCCATCTTGCTATATTG 2025
|| || || ||||||||||| ||||||||||||||||| || || |||||||||||||||
Sbjct 1947 TTCCATGGCCGTGGTGGCACAGTCGGAAGAGGAGGTGGTCCCACTCATCTTGCTATATTG 2006
Query 2026 TCTCAGCCTCCGGATACTA-TTAACGGTTCCCTCCGTGTCACAGTTCAAGGTGAAGTCAT 2084
|||||||| |||||||| | |||| || || || || ||||| ||||| |||||||||||
Sbjct 2007 TCTCAGCCACCGGATAC-AGTTAATGGCTCTCTTCGAGTCACGGTTCAGGGTGAAGTCAT 2065
Query 2085 CGAGCAATCGTTTGGTGAAG-AGCACTTATGCTTTAGAACACTTCAGCGTTTCACAGCTG 2143
|||||||| ||||| || | | ||||||||||||||||||||||||||||||||||| |
Sbjct 2066 TGAGCAATCATTTGGAGAGGCA-CACTTATGCTTTAGAACACTTCAGCGTTTCACAGCAG 2124
Query 2144 CTACACTCGAGCACGGTATGCGTCCTCCAATTTCGCCTAAACCAGAATGGCGCGCTTTGC 2203
|||| || |||||||| ||| ||||| ||||| || ||||| || ||||| |||||||
Sbjct 2125 CTACTCTAGAGCACGGAATGAACCCTCCGATTTCACCAAAACCCGAGTGGCGTGCTTTGC 2184
Query 2204 TGGATGAAATGGCGGTTGTTGCAACCGAGGAGTATCGCTCAGTTGTGTTCCAAGAACCTC 2263
| ||||||||||| ||||||||||| ||||| || || || || || |||||||||||||
Sbjct 2185 TTGATGAAATGGCTGTTGTTGCAACTGAGGAATACCGATCTGTCGTTTTCCAAGAACCTC 2244
Query 2264 GGTTTGTCGAGTACTTCCGCCTCGCTACACCGGAACTGGAGTATGGACGTATGAATATCG 2323
| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 2245 GATTTGTCGAGTATTTCCGCCTCGCTACTCCGGAGCTGGAGTATGGACGTATGAATATCG 2304
Query 2324 GAAGCAGACCTTCGAAGCGTAAACCAAGCGGTGGCATTGAATCTCTCCGTGCAATTCCAT 2383
|||| |||||||| ||||| ||||| |||||||| || ||||||||||||||||| ||||
Sbjct 2305 GAAGTAGACCTTCAAAGCGAAAACCGAGCGGTGGGATCGAATCTCTCCGTGCAATCCCAT 2364
Query 2384 GGATCTTCGCTTGGACTCAAACAAGATTCCATCTTCCTGTATGGCTT-GGATTCGGATCA 2442
||||||| |||||||| || |||||||||||||||||||||||| || || |||||| ||
Sbjct 2365 GGATCTTTGCTTGGACGCAGACAAGATTCCATCTTCCTGTATGG-TTAGGTTTCGGAGCA 2423
Query 2443 GCAATTAGACATGTGATCGAAAAAG-ACGTCAGGAACCTCCATATGCTCCAAGATATGTA 2501
||| |||| ||| |||| || ||| | || || |||||||| ||||| |||||||||||
Sbjct 2424 GCATTTAGGTATGCGATC-AAGAAGGATGTGAGAAACCTCCACATGCTGCAAGATATGTA 2482
Query 2502 CCAACACTGGCCTTTCTTTA-GAGTCACCATTGATCTAATCGAAATGGTGTTCGCTAAAG 2560
|||| ||||| || ||| |||||||||| |||||||| |||||||||||||| || |
Sbjct 2483 TAAACAATGGCCCTT-TTTCCGAGTCACCATCGATCTAATTGAAATGGTGTTCGCCAAGG 2541
Query 2561 GAGATCCTGGTATTGCTGCTTTGTACGATAAGCTTCTTGTTTCAGAGGAACTCTGGCCTT 2620
|||| || || || ||| |||||||||| || |||||||| ||||| || | ||| |||
Sbjct 2542 GAGACCCCGGGATCGCTACTTTGTACGACAAACTTCTTGTCTCAGAAGATTTATGGGCTT 2601
Query 2621 TTGGTGAGAAACTCAGAGCTAACTTCGAAGAAACCAAGAAACTCATCCTCCAGACCGCTG 2680
|||| |||||||||||||| ||||| || ||||||||||| ||| |||||||||| ||||
Sbjct 2602 TTGGAGAGAAACTCAGAGCCAACTTTGATGAAACCAAGAACCTCGTCCTCCAGACTGCTG 2661
Query 2681 GACACAAAGATCTTCTTGAAGGTGATCCTTACTTGAAACAGAGACTGAGACTTCGTGATT 2740
|||||||||| ||||||||||| ||||||||||||||||||||||| || || ||||| |
Sbjct 2662 GACACAAAGACCTTCTTGAAGGAGATCCTTACTTGAAACAGAGACTAAGGCTACGTGACT 2721
Query 2741 CTTACATTACAACTCTCAATGTCTGTCAAGCTTACACATTGAAGAGAATCCGTGATCCGA 2800
|||||||||| || ||||| || || ||||| ||||||||||| || ||||||||| | |
Sbjct 2722 CTTACATTACGACCCTCAACGTTTGCCAAGCCTACACATTGAAAAGGATCCGTGATTCAA 2781
Query 2801 GTTACCATGTGACTCTGCGACCACACATTTCTAAGGAGAT-A-GCGGAATCGAGCAAACC 2858
||| ||||||||||||||||||||||||| || ||||| | || |||| |||||| |
Sbjct 2782 ACTACAATGTGACTCTGCGACCACACATTTCCAAAGAGATCATGC--AATCAAGCAAATC 2839
Query 2859 AGCAAAAGAACTCATCGAGCTTAACCCGACTAGCGAATACGCGCCAGGACTTGAAGATAC 2918
|||| |||||||| || |||||||||| || || ||||||||||| |||||||| || ||
Sbjct 2840 AGCACAAGAACTCGTCAAGCTTAACCCCACGAGTGAATACGCGCCTGGACTTGAGGACAC 2899
Query 2919 ACTCATCTTGACGATGAAGGGTATTGCTGCTGG-TCTACAAAACACCGGTTAAG 2971
||| ||||| || |||||||| ||||| || || | | ||||||||||||||||
Sbjct 2900 ACTTATCTTAACCATGAAGGGAATTGCCGCAGGAT-TGCAAAACACCGGTTAAG 2952
> Ahg935146 jgi|Araly1|935146|scaffold_403134.1
Length=2939
Score = 1650 bits (893), Expect = 0.0
Identities = 2292/2955 (78%), Gaps = 146/2955 (5%)
Strand=Plus/Plus
Query 85 GAGAAGATGGCATCGATTGATGTTCATCTTC-GTCAACTGGTTCCTGGCAAAGTTAGTGA 143
||||||||||| || ||||||| ||| | || | | || | ||||||||| ||| |||
Sbjct 46 GAGAAGATGGCTTCAATTGATGCTCAGC-TCAGGCTTCTTGCTCCTGGCAAGGTTTCTGA 104
Query 144 AGACGACAAGCTTGTTGAGTATGATGCTTTGCTT-CTAGATCGGTTTCTCGATATCCTCC 202
||||||||||||| | ||||| |||||| | ||| | ||||| ||||||||||| || |
Sbjct 105 AGACGACAAGCTTATCGAGTACGATGCTCT-CTTGTTGGATCGATTTCTCGATATTCTTC 163
Query 203 AGGATTTGCACGGTGAAGATCTCCGTGAAACT-GTTCAAG-A-GCTTTATGAGCATT-CT 258
|||||||||| || || ||| || | | || | ||||||| | || || ||| || |
Sbjct 164 AGGATTTGCATGGCGAGGATGTCAGAG-AATTCGTTCAAGAATGC--TACGAG-GTTGCG 219
Query 259 GCAGAATACGAAGGGAAGCATG-AAC-CTAAGAAGCTAGAGGAGCTAGGGAGTGTGCTAA 316
|| || ||||| || || | | ||| || | |||||||||||||| || | | |||| |
Sbjct 220 GCTGATTACGATGGTAA-C-CGCAACACTGATAAGCTAGAGGAGCTTGGAAATATGCTGA 277
Query 317 CGAGTTTAGATCCAGGAGATTCCATTGTTATCGCTAAAGC-TTTCTCTC-ATATGCTTAA 374
||||||| |||||||| ||||| |||||| || | ||| | ||| || | | |||||||
Sbjct 278 CGAGTTTGGATCCAGGGGATTCGATTGTTGTCACAAAATCATTT-TC-CAACATGCTTAG 335
Query 375 CTTAGCCAATTTGGCTGAGGAAGTGCAGATTGCTTATCGCCGTAGGATCAAGAAGCTGAA 434
||| || ||| ||||||||||||| ||||||||||| || |||||||| ||||| || ||
Sbjct 336 CTTGGCTAATCTGGCTGAGGAAGTCCAGATTGCTTACCGGCGTAGGATTAAGAAACTCAA 395
Query 435 GAAAGGTGATTTTGTTGATGAGAG-CTCTGCTACTACTGAATCTGATC-TTGAAGAAACT 492
|||||||||||| | ||||||| | |||||| || || |||||||| | ||||||| |||
Sbjct 396 GAAAGGTGATTTCGCTGATGAG-GCCTCTGCAACGACGGAATCTGA-CATTGAAGAGACT 453
Query 493 TTCAAGAAGCTTGTTGGAGATCTGAACAAGTCTCCTGAAGAGATCTTTGATGCTCTCAAG 552
|||||| |||| ||| || || |||||| ||||||||||| |||||||||||||||||
Sbjct 454 CTCAAGAGGCTT-TTGCAG--CTTAACAAGACTCCTGAAGAGGTCTTTGATGCTCTCAAG 510
Query 553 AATCAGACTGTGGATTTGGTTTTGACTGCTCATCCTACTCAGTCTGTGAGAAGATCATTG 612
||||||||||| || |||||||| ||||||||||| ||||| ||||| | | || |||
Sbjct 511 AATCAGACTGTTGACTTGGTTTTAACTGCTCATCCCACTCAATCTGTTCGTCGGTCTTTG 570
Query 613 CTTCAGAAA-CATGGGAGGATAAGAGACTGTCTGGCTCAACTATATGCTAAGGATATTAC 671
|| || ||| ||| ||||| | |||||| || | || ||||||| ||||| |||||
Sbjct 571 CTCCA-AAAGTTTGGAAGGATTCGTGACTGTTTGACGCAGTTATATGCAAAGGACATTAC 629
Query 672 TCCTGATGACAAGCAAGAGCTCGATGAGGCTCTTCAGA-GAGAGATTCAAGCTGCATTCC 730
||||||||| || ||||| || ||||| ||||| || | |||||||||||||||| || |
Sbjct 630 TCCTGATGATAAACAAGAACTTGATGAAGCTCTGCA-ACGAGAGATTCAAGCTGCTTTTC 688
Query 731 GAACAGATGAAATCAAAAGAACACCACCTACTCCTCAAGATGAGATGAGAGC-GGGAATG 789
| || |||||||||| |||||| || || || || || ||||| |||||||| ||| |||
Sbjct 689 GCACTGATGAAATCAGAAGAACTCCTCCAACACCGCAGGATGAAATGAGAGCAGGG-ATG 747
Query 790 AGTTATTTCCATGAAACTATCTGGAAAGGTGTTCCTAAGTTTC-TGCGCCGTGTTGACAC 848
|| || |||||||| || ||||||||||| ||||||||| ||| || | |||||||||||
Sbjct 748 AGCTACTTCCATGAGACAATCTGGAAAGGAGTTCCTAAG-TTCTTGAGACGTGTTGACAC 806
Query 849 GGCTTTGAAA-AACATAGGGATCGAA-GAACGTGTTCCATATAATGCTCCAT-TGATTCA 905
|||||| ||| ||||| || ||| || || |||||||| || ||||| || | | |||||
Sbjct 807 GGCTTT-AAAGAACATTGGAATC-AACGAGCGTGTTCCTTACAATGCGCC-TCTCATTCA 863
Query 906 GTTCTCTTCTTGGATGGGTGGTGATCGTGACGGTAACCCAAGGGTTACACCTGAAGTCAC 965
|||||||||||||||||| || || ||||| || ||||| | || || |||||||| ||
Sbjct 864 GTTCTCTTCTTGGATGGGCGGAGACCGTGATGGAAACCCGCGAGTAACTCCTGAAGTTAC 923
Query 966 CAGAGATGTTTGCTTGTTAGCTAGAATGATGGCTGCTACTATGTACTT-TAACCAAATCG 1024
|||||||| ||||| |||||||||||||||||||||| | | ||||| | ||| || |
Sbjct 924 AAGAGATGTATGCTTATTAGCTAGAATGATGGCTGCTAATCTCTACTTCT-CCCAGATAG 982
Query 1025 AAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGACGAGCTGCGTG-CGCGAGCT 1083
|||||||||||||||||||||||||||||||||||||||| || || |||| | || ||
Sbjct 983 AAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGAGGAACTTCGTGTC-CGTGC- 1040
Query 1084 GATGAA-GTTCATGCAAAT-T-CGAGGAAAGATGCTGCAAAACATTACATAGAATTCTGG 1140
| ||| || || | | | | ||| |||| | ||||||||| || |||||||| |||
Sbjct 1041 -A-GAACGT-CAA-CGA-TGTGCGA--AAAGG-GATGCAAAACACTATATAGAATTTTGG 1092
Query 1141 AAGTCAATTCC-TAC-AACTGAGCCATACCGTG-TGATTCTTGGCGATGTAAGGGACAAG 1197
|| ||| ||| | | || |||||||||||| | | |||||||| |||||||||||||||
Sbjct 1093 AAA-CAAATCCCTGCGAA-TGAGCCATACCGAGCT-ATTCTTGGAGATGTAAGGGACAAG 1149
Query 1198 CTTTATCA-CACACGTGAACGCGCTCATCA---ACTGCTCA-GCAATGGACACTCTGATG 1252
|| || || |||||||||||| || | ||| | || ||| || ||| || || |
Sbjct 1150 CTGTA-CAACACACGTGAACGTGCACGTCAGTTATTG-TCAAGC---GGAGTTTCAGACG 1204
Query 1253 T-CCCTGTAGAGGCTACTTTCATTAACT-TGGAACAGTTCTTGGAACCTCTTGAGCTCTG 1310
| ||| | ||| ||| ||||| || | |||| ||||| ||||| || |||||||| ||
Sbjct 1205 TTCCC-GAAGAAGCTGTTTTCAC-AAGTGTGGATCAGTTTTTGGAGCCACTTGAGCTTTG 1262
Query 1311 TTACCGATCTCTGTGTTCAT-GTGGTGATC-GTCCAATAGCAGATGGAAGCCTTCTTGAT 1368
|||| | || || ||| || | ||||| | | || || || ||||||||||| || |||
Sbjct 1263 TTACAGGTCGCTCTGTG-ATTGCGGTGA-CAGACCTATTGCTGATGGAAGCCTGCTCGAT 1320
Query 1369 TTCTTGAGGC-AAGTCTCAACCTTTGGGCTCT-CTCTTGTGAGACTTGACATAAGGCAAG 1426
||||| | || |||| ||||| |||||||| | | ||||| | |||||| || | ||||
Sbjct 1321 TTCTT-ACGCCAAGTGTCAACATTTGGGCT-TGCGCTTGTTAAACTTGATATCCGTCAAG 1378
Query 1427 AATCTGACCGCCACACTGATGTATTGGATGCTATCACCACGCATTTAGATATCGGATCCT 1486
|||||||| | ||||| ||||| |||||||||||||| ||||| |||| ||| || || |
Sbjct 1379 AATCTGACAGACACACCGATGTCTTGGATGCTATCACGACGCACTTAGGTATTGGTTCTT 1438
Query 1487 ACAGAGAGTGGTCTGAAGA-ACGCCGCCAAGAATGGCTTTTATCTGAGCTAAGTGGCAAA 1545
||| ||||||||| || || | | ||||||||||| |||||||||||||| || |||
Sbjct 1439 ACAAAGAGTGGTCGGAGGATAAAA-GACAAGAATGGCTGTTATCTGAGCTAAGCGGGAAA 1497
Query 1546 CGTCCGCT-TTTCGGTTCTGATCTTCCTAAAACCGAAGAAATAGCTGATGT-TCTGGACA 1603
|| || || ||| || | |||||||| ||||| ||||| | || ||||| | ||||||
Sbjct 1498 CGCCCTCTCTTT-GGACCGGATCTTCCCAAAACTGAAGAGGTTGCAGATGTGT-TGGACA 1555
Query 1604 CGTTTCAT-GTCATAGCCGAGCTACCAGCAGATAGCTTTGGTGCTTACATTATCTCTATG 1662
| ||||| ||||| | ||||| || | ||||| ||||||||||| || ||||| |||
Sbjct 1556 C-TTTCAAAGTCATTTCTGAGCTTCCTTCGGATAGTTTTGGTGCTTATATAATCTCAATG 1614
Query 1663 GCAACTGCACCTTCTGATGTATTAGCTGTTGAGCTTTTACAGCGTGAATGCCG-AGTGAA 1721
|| ||||| || || ||||| | ||||||||||| || || || ||||| | | | |
Sbjct 1615 GCCACTGCTCCATCAGATGTGCTCGCTGTTGAGCTCTTGCAACGCGAATGTGGCA-TCAC 1673
Query 1722 -ACAGCCTTTGAGAGTTGTTCCGCTCTTTGAGAAGCTAGCAGATCTGGAAGCAGCTCCTG 1780
| | ||| |||||||||| ||| | || ||||||||||| ||| | ||| | || ||||
Sbjct 1674 TA-ATCCTCTGAGAGTTGTCCCGTTGTTCGAGAAGCTAGCGGATTTAGAATCTGCGCCTG 1732
Query 1781 CTGCAGTTGCTAGGCTCTTTTCTGTTGATTGGTACAAAAACCGAATTAACGGTAAGCAAG 1840
|| |||| || | ||||| || | || ||||||| |||||| || || || |||||||
Sbjct 1733 CTTCAGTCGCCCGTCTCTTCTCCATAGAATGGTACAGAAACCGGATCAATGGAAAGCAAG 1792
Query 1841 AGGTTATGATTGGTTATTCGGATTCAGGAAAAGATGCTGGACGGTTATCTGCTGCTTGGC 1900
| || ||||| || ||||| || || || ||||||||||| || |||||||| |||||||
Sbjct 1793 AAGTCATGATCGGGTATTCTGACTCGGGCAAAGATGCTGGTCGTTTATCTGCGGCTTGGC 1852
Query 1901 AGTTATACAA-AGCTCAAGAAGAGCTTGTGAAGGTTGCTAAAGAGTACGGTGTGAAGCTA 1959
|| ||||||| | |||| |||||||| |||||||| || ||||| ||||| || |||||
Sbjct 1853 AGCTATACAAGA-CTCAGGAAGAGCTCGTGAAGGTGGCAAAAGAATACGGAGTTAAGCTC 1911
Query 1960 ACAATGTTTCACGGTCGTGGTGGCACGGTCGGAAGAGGAGGTGGACCAACCCATCTTGCT 2019
|| ||||| ||||| | ||||| || || ||| ||||||||||||||||||||||||||
Sbjct 1912 ACTATGTTCCACGGAAGAGGTGGGACTGTAGGACGAGGAGGTGGACCAACCCATCTTGCT 1971
Query 2020 ATATTGTCTCAGCCTCCGGATACTATTAACGGTTCCCTCC-GTGTCACAGTTCAAGGTGA 2078
|| |||||||||||||| ||||| ||| | || | | | || || |||||||||||
Sbjct 1972 ATTTTGTCTCAGCCTCCAGATACCATTCATGGG-CAATTAAGGGTAACCGTTCAAGGTGA 2030
Query 2079 AGTCATCGAGCAATCGTTT-GGTGAAGAGCACTTATGCTTTAGAACACTTCAGCGTTTCA 2137
||| || || || || ||| || |||||||||||||||||||| || |||||||||||||
Sbjct 2031 AGTTATTGAACAGTC-TTTCGGAGAAGAGCACTTATGCTTTAGGACTCTTCAGCGTTTCA 2089
Query 2138 CAGCTGCTACACTCGAGCACGGTATGCGTCCTCCAATTTCGCCTAAACCAGAATGGCGCG 2197
| ||||| ||||| ||||| || |||| ||| || |||| ||||| || || |||||||
Sbjct 2090 CGGCTGCAACACTTGAGCATGGAATGCATCCACCGGTTTCCCCTAAGCCCGAGTGGCGCG 2149
Query 2198 -CTTTGCTGGATGAAATGGCGGTTGTTGCAACCGAGGAGTATCGCTCAGTTGTGTTCCAA 2256
| | ||||||||||||| | |||| || || || || || || || || ||| ||
Sbjct 2150 TCCTCA-TGGATGAAATGGCTATAATTGCCACTGAAGAATACCGTTCTGTCGTCTTC-AA 2207
Query 2257 GAA-CCTCGGTTTGTCGAGTACTTCCGCCTCGCTACACCGGAACTGGAGTATGGACGTAT 2315
| | || || ||||| ||||||||||| || || |||||||| || ||||||||| | ||
Sbjct 2208 GGAGCCCCGTTTTGTTGAGTACTTCCGTCTGGCGACACCGGAGCTTGAGTATGGAAGGAT 2267
Query 2316 GAATATCGGAAGCAGACCTTCGAAGCGTAAACCAAGCGGTGGCATTGAATCTCTCCGTGC 2375
||| || |||||| |||| ||||| |||||||| ||||| || || || || || |||||
Sbjct 2268 GAACATAGGAAGCCGACCATCGAAACGTAAACCGAGCGGAGGAATCGAGTCGCTGCGTGC 2327
Query 2376 AATTCCATGGATCTTCGCTTGGACTCAAACAAGATTCCATCTT-CCTGTATGGCTTGGAT 2434
|| || |||||||| || |||||||| || || || || ||| || || ||||| || |
Sbjct 2328 GATCCCGTGGATCTTTGCATGGACTCAGACGAGGTTTCA-CTTACCCGTGTGGCTAGGCT 2386
Query 2435 TCGGATCAGCAATT-AGACATGTGATCGAAAAAGACG-TCAGGAACCTCCATATGCTCCA 2492
| ||| ||| || | || |||||| | || ||| | || || ||| | |||||| |
Sbjct 2387 TTGGAGGGGCA-TTCAAACGCGTGATCCAGAAGGACAATAAG-AATCTCAACATGCTCAA 2444
Query 2493 AGATATGTACCAAC-ACTGGCCTTTCTTTAGAGTCACCATTGATCTAATCGAAATGGTGT 2551
||| |||||| ||| | ||||||||||| | ||||| |||||||| |||||||||| |
Sbjct 2445 AGAGATGTAC-AACCAATGGCCTTTCTTCCGTGTCACAATTGATCTGGTCGAAATGGTTT 2503
Query 2552 TCGCTAAAGGAGATCCTGGTATTGCTGCTTTGTACGATAAGCTTCTT-GTTTCAGAGGAA 2610
|||| ||||||||||| || || || ||| ||||||| || || | || || || |||
Sbjct 2504 TCGCCAAAGGAGATCCAGGAATCGCGGCTCTGTACGACC-GCCTCCTCGTCTCTGAAGAA 2562
Query 2611 CT-CTGGCCTTTTGGTGAGA-AACT-CAGAGCTAACTTCGAAGAAACCAAGAAAC-TCAT 2666
|| | || || ||||| | |||| | ||| ||||| | |||| |||| || | || |
Sbjct 2563 CTTCAA-CCATTCGGTGA-ACAACTTC-GAGTTAACTACCAAGAGACCA-GACGCCTCCT 2618
Query 2667 CCTCCAGACCGCTGGACACAAAGATC-TTCTTGAAGGTGATCCTTACTTGAAA-CAGAGA 2724
||||||| || || |||||||| | |||| |||||||| |||||||| || || ||
Sbjct 2619 CCTCCAGGTTGCAGGTCACAAAGA-CATTCTAGAAGGTGACCCTTACTT-AAGGCAAAGG 2676
Query 2725 CTG-AGACTTCGTGATTCTTACATTACAAC-TCTCAATGTCTGTCAAGCTTACACATTGA 2782
||| || || ||||| | ||||| || || | | || || || ||||| |||||| | |
Sbjct 2677 CTGCAG-CTACGTGACCCATACATCACGACAT-TGAACGTGTGCCAAGCCTACACACTCA 2734
Query 2783 AG-AGAATCCGTGATCCGAG-TTACCATGTGACTCTGCGACCACA-CATTTCTAAGGAG- 2838
|| ||| ||||||| || || || ||| || | | || ||||| | | ||||||||
Sbjct 2735 AGCAGA-TCCGTGACCCAAGCTT-CCACGTCAAAGTCCGGCCACATC-TATCTAAGGACT 2791
Query 2839 ATAGCGGAATCGAGCAAACCAGCAAAAGAACTCATCGAGCTTAACCCGACTAGCGAATAC 2898
| | ||| || || |||||| || || | |||| || || | |||||||||
Sbjct 2792 ACAT-GGAGTCTAGT---CCAGCAGCTGAGCTTGTAAAGCTCAATCCAAAGAGCGAATAC 2847
Query 2899 GCGCCAGGACTTGAAGATACAC-TCATCTTGACGATGAAGGGTATTGCTGCTGGTCTACA 2957
|| || |||||||||||||| | ||||| | || ||||||||||||||||| ||| | ||
Sbjct 2848 GCACCGGGACTTGAAGATAC-CGTCATCCTCACTATGAAGGGTATTGCTGCCGGTATGCA 2906
Query 2958 AAACACCGGTTAAGC 2972
|||||||||||||||
Sbjct 2907 AAACACCGGTTAAGC 2921
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121050798610
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5