BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G58520.2 Length=3613 Score E Sequences producing significant alignments: (Bits) Value Ahg925155 jgi|Araly1|925155|scaffold_200716.1 2876 0.0 Ahg471124 jgi|Araly1|471124|fgenesh2_kg.1__1078__AT1G10090.1 1528 0.0 Ahg475383 jgi|Araly1|475383|fgenesh2_kg.2__513__AT1G59406.1 1393 0.0 Ahg907559 jgi|Araly1|907559|Al_scaffold_0002_640 1356 0.0 > Ahg925155 jgi|Araly1|925155|scaffold_200716.1 Length=2335 Score = 2876 bits (1557), Expect = 0.0 Identities = 1744/1830 (95%), Gaps = 30/1830 (2%) Strand=Plus/Plus Query 1380 GTATAGCACCATAGCTAAAATGAGGCTTGGGCATATTACTGGATGTGCCTCAAAGCCAAG 1439 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 515 GTATAGGACCATAGCTAAAATGAGGCTTGGACATATTACTGGATGTGCCTCAAAGCCAAG 574 Query 1440 TCAATTTACCGTTCTTATCCGTGCTATTCCATGGTCTCCTGAGCAATCTTACAGCGACAC 1499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 575 TCAATTTACCGTTCTTATCCGTGCTATTCCATGGTCTCCTGAGCAATCTTACAGCGACAC 634 Query 1500 GCTGAGCAAATTCTTCACAAACTACTACTCGTCCAGCTACGTGTCCCACCAAATGGTCTA 1559 |||||||||||||||||||| ||||| || || ||||| |||||||||||||||||||| Sbjct 635 ACTGAGCAAATTCTTCACAAATTACTATTCATCAAGCTATGTGTCCCACCAAATGGTCTA 694 Query 1560 CCATAATGGCATCATTCAGAGACTGCTGCGTGATGCGGAGAGGATGTGCCAGACTCTAAA 1619 ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 695 CCATAATGGTATCATTCAGAGACTGTTGCGTGAGGCGGAGAGGATGTGCCAGACTCTAAA 754 Query 1620 ACACGTTTCTCCTGAAATCAATTGTAAACCGAGTTT-AAGGCCATGCACCTTTTGTGGAG 1678 |||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| Sbjct 755 ACACGTTTCTCCTGAAATCAATTGTAAACCAAGTTTGAA-GCCATGCATCTTTTGTGGAG 813 Query 1679 GACCTACAGCCACAAGTTCTTTTCATATCCTATCGAATGAGGCAGACAGTGTGAAAGGAA 1738 ||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| Sbjct 814 GACCTACAGCCACAAATTCTTTTCATATCCTATCTAATGAGGCGGACAGTGTGAAAGGAA 873 Query 1739 TGGAGCTTGGTGAGTTGACTATGACTACGACTACGACAGAGCAAGAACGTTCAGCTGCTT 1798 ||||||||||||||||||| | | | |||||||||||||||||||||| ||||||||| Sbjct 874 TGGAGCTTGGTGAGTTGAC--T-A-T--GACTACGACAGAGCAAGAACGTCCAGCTGCTT 927 Query 1799 TTGTGTTTTTTAAGACTCGCTATGATGCTCTTGTTGTTTCGGAGGTTCTACAATCATCAA 1858 |||||||||| || || ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 928 TTGTGTTTTTCAAAACACGCTATGATGCTCTTGTTGTTTCAGAGGTTCTACAATCATCAA 987 Query 1859 ATCCTATGTTATGGGTGACAGACTTAGCCCCAGAACCTCATGATGTGTACTGGAAGAATC 1918 |||||||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct 988 ATCCTATGCTATGGGTGACAGACTTAGCTCCAGAACCTCACGATGTGTATTGGAAGAATC 1047 Query 1919 TCAACATTCCTTATCGACAACTTTGGATACGGAAAATAGCAACCCTTGTTGGTGCAGTTG 1978 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1048 TCAACATTCCTTATCGACAACTTTGGATACGGAAAATAGCAACCCTTGTTGGTGCAGTTG 1107 Query 1979 CTTTCATGTTTGTGTTTCTTATTCCCGTTACCTTCATTCAAGGGCTGACTCAACTAGTGC 2038 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct 1108 CTTTCATGTTTGTGTTTCTTATTCCCGTGACCTTCATTCAAGGGCTGACTCAACTAGAGC 1167 Query 2039 AGCTGTCTCACGCATTTCCTTTTCTAAGAGGCATCTTGAGCAAGAACTTTATAAACCAGG 2098 |||||||||||||||||||||||||||||||||||||||| ||| | ||||||| ||||| Sbjct 1168 AGCTGTCTCACGCATTTCCTTTTCTAAGAGGCATCTTGAGGAAGCAGTTTATAAGCCAGG 1227 Query 2099 TCATCACAGGGTACTTACCCAGTGTGATCTTGATTCTATTTTTCTATGCCGTTCCACCAT 2158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1228 TCATCACAGGGTACTTACCCAGTGTGATCTTGATTCTATTTTTCTATGCCGTTCCACCAT 1287 Query 2159 TGATGATGTATTTTTCGGCCTTGGAGGGATGTATTTCACGGAGTATAAGGAAGAAGAGTG 2218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1288 TGATGATGTATTTTTCGGCCTTGGAGGGATGTATTTCACGGAGTATAAGGAAGAAGAGTG 1347 Query 2219 CTTGCATCAAAGTCTTATATTTTACCATTTGGAATGTGTTCTTCGTGAATATATTATCAG 2278 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1348 CTTGCATCAAAGTCTTATATTTTACCATTTGGAATGTGTTCTTCGTGAATATTTTATCGG 1407 Query 2279 GGTCTGTTATCAGGCAACTGAATGTCTTTTCTAGTGTCAGAGACATACCTGCACAACTTG 2338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1408 GGTCTGTTATCAGGCAACTGAATGTCTTTTCTAGTGTCAGAGACATACCTGCACAACTTG 1467 Query 2339 CTAGAGCAGTGCCAACACAGGCTGGCTTCTTCATGACCTATTGTTTCACATCTGGTTGGG 2398 | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1468 CAAGATCAGTGCCAACACAGGCTGGCTTCTTCATGACCTATTGTTTCACATCTGGTTGGG 1527 Query 2399 CCAGTTTGGCTTGTGAAATAATGCAGCCTATGGCTCTTATCTGGAATCTGGTAGCAAAAG 2458 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1528 CGAGTTTGGCTTGTGAAATAATGCAGCCTATGGCTCTTATCTGGAATCTGGTAGCAAAAG 1587 Query 2459 TTGTTACCAAGAACGAGGATGAGTCATATGAAACACTTAGGTTCCCATACCACACCGAAA 2518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1588 TTGTTACCAAGAACGAGGATGAGTCATATGAAACACTTAGGTTCCCATACCACACCGAAA 1647 Query 2519 TTCCTCGGCTGCTTTTGTTTGGGCTCCTGGGTTTCACCAATTCAGTCATAGCACCACTGA 2578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1648 TTCCTCGGCTGCTTTTGTTTGGGCTCCTGGGTTTCACCAATTCAGTCATAGCACCACTGA 1707 Query 2579 TACTGCCGTTTTTGCTGATATACTTTTTCCTTGCATATCTCATATACAAAAATCAAATAC 2638 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1708 TACTGCCGTTTTTGCTGATATACTTTTTCCTTGCATATCTCATATACAAAAATCAGATAC 1767 Query 2639 TCAACGTGTATATTACGAAGTACGAAAGCGGTGGACAATACTGGCCTATTTTCCACAACA 2698 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1768 TCAACGTGTATATTACAAAGTACGAAAGCGGTGGACAATACTGGCCTATTTTCCACAACA 1827 Query 2699 CAACAATCTTTTCACTGATCTTGACACAGATTATAGCTTTGGGGTTT-TTCGGATTAAAG 2757 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1828 CAACAATCTTTTCACTGATCTTGACACAGATTATAGCTTTGGG-TTTCTTCGGATTAAAG 1886 Query 2758 CTATCAACAGTTGCTTCGGGTTTCACCATACCGTTAATTCTTCTCACGTTACTTTTTAGT 2817 |||||||| ||||||||||||||||| ||||| || ||||||||||| || ||||||||| Sbjct 1887 CTATCAACGGTTGCTTCGGGTTTCACTATACCATTGATTCTTCTCACTTTGCTTTTTAGT 1946 Query 2818 GAGTATTGTCGGCAGAGGTTTGCGCCCATTTTCAACAAAAATCCTGCCCAGGTTCTCATA 2877 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1947 GAGTATTGTCGGCAGAGGTTTGCGCCCATTTTCAACAAAAATCCTGCCCAGGTTCTCATA 2006 Query 2878 GATATGGACAGAGCTGATGAAATATCAGGAAAGATGGAAGAGTTACATAAAAAATTGCAT 2937 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2007 GATATGGACAGGGCTGATGAAATCTCAGGAAAGATGGAAGAGTTACATAAAAAATTGCAT 2066 Query 2938 AATGTATACTCGCAGATACCATTACACTCTCAGAAATCATCGAGTAAAGCTGAATGTAGT 2997 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct 2067 AATGTATACTCGCAGATACCATTACACTCTGAGAAATCATCGAGTAAAGCTGAATGCAGT 2126 Query 2998 AATCCTTTCAAAAAGCAGGAGTTACCAGATCCTGAAAAATTGAAGCCAGAGGAGGGGGAT 3057 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2127 AATCCTTTCAAAAATCAGGAGTTACCAGATCCTGAAAAATTGAAGCCAGAGGAAGGGGAT 2186 Query 3058 GCGATAGCTAAAGAGTTATGGGGAT-TCCAAGGCAATGAATCTGGTCAAGAACATGACAC 3116 |||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| | Sbjct 2187 GCGATAGCGAAAGAGTTATGGGGATATC-AAGGCAATGAATCTGGTCAAGAACATGACGC 2245 Query 3117 TAAGTCCTG----AG--C---A--------TCTTTCTCCAAAGAAGATCGAACTTCACAA 3159 ||||||||| || | | ||||||||||||| ||||||||||||||| Sbjct 2246 TAAGTCCTGTCCCAGTGCTTCACCAGAGCATCTTTCTCCAAAGCTGATCGAACTTCACAA 2305 Query 3160 ACGGAACTAGACAGATGTTTTT-ACTAGTG 3188 ||||||||||||||| ||||| ||||||| Sbjct 2306 ACGGAACTAGACAGACATTTTTTACTAGTG 2335 Score = 669 bits (362), Expect = 0.0 Identities = 396/413 (96%), Gaps = 0/413 (0%) Strand=Plus/Plus Query 909 TAGGAAACAGCCAGCCAATTACTGTGTATATTTTGGCCGAAGGCTTGTTTGTGGTGGTGC 968 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 101 TAGGAAACAACCATCCAATTACTGTGTATATTTTGGCCGAAGGCTTGTTTGTGGTGGGGC 160 Query 969 TAGACGTTATGATCCTTTTTGGTATGAGAGGTTTGTGCCGTCTCCAAGTTGGCTTGTGAA 1028 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || Sbjct 161 TAGACGTTATGATCCGTTTTGGTATGAGAGGTTTGTGCCGTCTCCAAGTTGGCTGGTTAA 220 Query 1029 AGCATGGGAGACTAGTGAAGACGAGTTATTAGCTGCTGCTGGTCTTGATGCTGTCGTCTT 1088 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 221 AGCATGGGAAACTAGTGAAGATGAGTTATTAGCTGCTGCTGGTCTTGATGCTGTTGTCTT 280 Query 1089 CCTTAGGATGGTCATTTTCAGCATTCGTATTTTCTTTATAGTTGCTGTTATTTGCATTGC 1148 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 281 CCTTAGGATGGTCCTTTTCAGCATTCGTATTTTCTTTATAGTTGCTGTTATTTGCATTGC 340 Query 1149 CTTTGTGCTGCCTGTTAATTATTATGGGCAACCGATGGTGCATAAGGAAATCCATTTGGA 1208 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 341 CTTTGTACTGCCTGTTAATTATTATGGGCAACCGATGGTGCATAAGGAAATCCATTTGGA 400 Query 1209 GTCATCCGAAGTGTTTACAATTGAAAATCTTAAAGAAGGCTCAAAATGGCTGTGGGTTCA 1268 ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 401 GTCATCCGAAGTGTTCACAATCGAAAATCTTAAAGAAGGCTCCAAATGGCTGTGGGTTCA 460 Query 1269 TTGTCTTGCACTGTACATTATAACCTCAGCGGCATGTCTTCTGCTCTACTTTG 1321 |||||||||||||||||||||||||||||||||||||||||| || || |||| Sbjct 461 TTGTCTTGCACTGTACATTATAACCTCAGCGGCATGTCTTCTTCTTTATTTTG 513 > Ahg471124 jgi|Araly1|471124|fgenesh2_kg.1__1078__AT1G10090.1 Length=2802 Score = 1528 bits (827), Expect = 0.0 Identities = 1411/1686 (84%), Gaps = 67/1686 (4%) Strand=Plus/Plus Query 1389 CATAGCTAAAATGAGGCTTGGGCATATTACTGGATGTGCCTCAAAGCCAAGTCAATTTAC 1448 |||||| |||| |||||||| ||||||||||||| | ||||||||| |||||| ||||| Sbjct 793 CATAGCCAAAAGGAGGCTTGCCCATATTACTGGATCTACCTCAAAGCAAAGTCATTTTAC 852 Query 1449 CGTTCTTATCCGTGCTATTCCAT-GGTCTCCTGAGCAATCTTACAGCGACACGCTGAGCA 1507 |||||||| ||||||||||| | ||||||||| || || |||||||| ||| |||||| Sbjct 853 TGTTCTTATTCGTGCTATTCC-TCAGTCTCCTGACCAGTCCTACAGCGAGACGGTGAGCA 911 Query 1508 AATTCTTCACAAACTACTACTCG-TCC-AGCTACGTGTCCCACCAAATGGTCTACCATAA 1565 ||| ||||||||| ||||| | | || ||||| ||||| |||| ||||||||||| | | Sbjct 912 AATACTTCACAAATTACTA-T-GCACCAAGCTATGTGTCGCACCTAATGGTCTACCGTGA 969 Query 1566 TGGCATCATTCAGAGACTGCTGCGTGATG-CGGAGAGGATGTGCCAGACTCTAAAACACG 1624 |||| ||||||| |||||| || ||| | ||||||||||||| ||| || ||||||| | Sbjct 970 TGGCTTCATTCACAGACTGATGAATGA-GACGGAGAGGATGTGTCAGGCTATAAAACATG 1028 Query 1625 TTTCTCCTGAAATCAA-TTGTAAACCGAGTTT-AAGGCCATGCACCTTTTGTGGAGGACC 1682 ||||||||| | | || |||||| |||||||| || | |||| || ||||| ||||| Sbjct 1029 TTTCTCCTG-ATTTAAGTTGTAATCCGAGTTTGAA-GTCATGTGCCCTTTGT---GGACC 1083 Query 1683 TACAGCCACAAGTTCTTTTCATATCCTATCGAATGAGGCAGACAGTGTGAAAGGAATGGA 1742 | ||||||||| ||||||||| ||||| ||||| ||| |||||||||| ||||| | | Sbjct 1084 TGCAGCCACAAATTCTTTTCAAATCCTCTCGAACGAGACAGACAGTGTCAAAGG-A--CA 1140 Query 1743 GCTTGGTGAGTTGACTATGACTACGACTACGACAGAGCAAGAACGTTCAGCTGCTTTTGT 1802 |||||||||||||||| | | ||||||||||||| |||||||| | | ||||||||| Sbjct 1141 GCTTGGTGAGTTGACT-T---T--GACTACGACAGAGGAAGAACGTCCCGTTGCTTTTGT 1194 Query 1803 GTTTTTTAAGACTCGCTATGATGCTCTTGTTGTTTCGGAGGTTCTACAATCATCAAATCC 1862 |||||| |||| ||| |||||||||||||||||||| |||||||| ||| || ||||||| Sbjct 1195 GTTTTTCAAGAGTCGTTATGATGCTCTTGTTGTTTCAGAGGTTCTTCAAACACCAAATCC 1254 Query 1863 TATGTTATGGGTGACAGACTTAGCCCCAGAACCTCATGATGTGT-ACTGGAAGAATCTCA 1921 ||||||||||||| ||||||| || ||||| ||||||||||| | |||||| |||||||| Sbjct 1255 TATGTTATGGGTGGCAGACTTGGCGCCAGAGCCTCATGATGT-TCACTGGAGGAATCTCA 1313 Query 1922 -ACATTCCTTATCGACAACTTTGGATACGGAA-AATAGCAACCCTTGTTGGTGCAGTTGC 1979 | || |||||||| ||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct 1314 GA-ATACCTTATCGGCAACTTTGGATGC-GAAGAATAGCAACCCTTGTTGGTGCAGTTGC 1371 Query 1980 TTTCATGTTTGTGTTTCTTATTCCC-GTTACCTTCATTCAAGGGCTGACTCAACTAGTGC 2038 |||||||||||||||||| ||||| ||| |||| |||||||||||||||| ||| Sbjct 1372 CTTCATGTTTGTGTTTCTT-TTCCCTGTTGCCTTTGTTCAAGGGCTGACTCAGCTA-CAA 1429 Query 2039 A-GCTGTCTCACGCA-TTTCCTTTTCTAAGAGGCATCTTG-AGCAAGAACTTTATAAACC 2095 | ||| || || | | |||||||||||||||| | ||||| | |||| ||||| || | Sbjct 1430 ACGCTATC-CAAGAATTTTCCTTTTCTAAGAGACCTCTTGCA-CAAGGGGTTTATGAAGC 1487 Query 2096 AGGTCATCACAGGGTACTTACCCAGTGTGATCTTGATTCTATT-TTTCTATGCCGTTCCA 2154 |||||||||||||||||||||| |||||||| ||| ||||||| ||| ||||||||||| Sbjct 1488 AGGTCATCACAGGGTACTTACCAAGTGTGATTTTGGTTCTATTCTTT-TATGCCGTTCCG 1546 Query 2155 CCATTGATGATGTATTTTTCGGCCTTGGAGGGATGTATTTCACGGAGTATAAGGAAGAAG 2214 |||||||||||||| ||||| |||||||||||||| |||| |||||| |||| ||||| Sbjct 1547 CCATTGATGATGTACTTTTCAACCTTGGAGGGATGTGTTTCTCGGAGTCTAAGAAAGAAA 1606 Query 2215 AGTGCTTGCATCAAAGTCTTATATTTTACCATTTGGAATGTGTTCTTCGTGAATATAT-T 2273 ||||| || |||||| | ||||| |||||||| ||||||||||||||||| ||||| | | Sbjct 1607 AGTGCATGTATCAAAATTTTATACTTTACCATCTGGAATGTGTTCTTCGTCAATAT-TCT 1665 Query 2274 ATCAGGGTCTGTTATCAGGCAACTGAATGTCTTTTCTAGTGTCAGAGACATACCTGCACA 2333 |||||| |||||||||||||| ||| ||||| |||||||| || |||||||||||||| Sbjct 1666 ATCAGGCTCTGTTATCAGGCAGTTGAGCGTCTTGTCTAGTGTGAGGGACATACCTGCACA 1725 Query 2334 ACTTGCTAGAGCAGTGCCAACACAGGCTGGCTTCTTCATGACCTATTGTTTCACATCTGG 2393 |||||| | || ||| ||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 1726 ACTTGCGAAAGTAGTTCCAGCACAGGTTGGCTTCTTCATGACCTATTGTTTCACATCTGG 1785 Query 2394 TTGGGCCAGTTTGGCTTGTGAAATAATGCAGCCT--ATGGCTCTTATCTGGAATCTGGTA 2451 ||||||| ||||||| |||||||| ||||| ||| ||| |||||||||||||||| || Sbjct 1786 TTGGGCCGGTTTGGCATGTGAAATCATGCAACCTGTATG--TCTTATCTGGAATCTGATA 1843 Query 2452 GCAAAAGTTGTTACCAAGAACGAGGATGAGTCATATGAAACACTTAGGTTCCCATACCAC 2511 ||||||||| || ||||||| |||| || |||||||||||||||||||| || ||||| Sbjct 1844 GCAAAAGTTATTGTCAAGAACAAGGAGGACTCATATGAAACACTTAGGTTTCCGTACCAT 1903 Query 2512 ACCGAAATTCCTCGGCTGCTTTTGTTTGGGCTCCTGGGTTTCACCAATTCAGTCATAGCA 2571 || ||||||||||| || |||||||| |||||||| |||||||| |||||||||||||| Sbjct 1904 ACAGAAATTCCTCGACTACTTTTGTTCGGGCTCCTAGGTTTCACAAATTCAGTCATAGCG 1963 Query 2572 CCACTGATACTGCCGTTTTTGCTGATATACTTTTTCCTT-GCATATCTCATATACAAAAA 2630 || || |||||||||||| ||||||| ||||||||| || |||||||| ||||||||||| Sbjct 1964 CCTCTAATACTGCCGTTTCTGCTGATCTACTTTTTC-TTCGCATATCTTATATACAAAAA 2022 Query 2631 TCAAATACTCAACGTGTATATTACGAAGTACGAAAGCGGTGGACAATACTGGCCTATTTT 2690 ||| ||| ||||||| |||||||| || || ||||||||||||||||| |||||| |||| Sbjct 2023 TCAGATAATCAACGTCTATATTACAAAATATGAAAGCGGTGGACAATATTGGCCTGTTTT 2082 Query 2691 CCACAACACAACAATCTTTTCACTGATCTTGACACAGATTATAGCTTTGGGGTTTTTCGG 2750 |||||||| ||||||||||||||||||||| | || |||||||| | || |||||||| Sbjct 2083 TCACAACACGACAATCTTTTCACTGATCTTGTCGCAAATTATAGCGCTAGGCTTTTTCGG 2142 Query 2751 ATTAAAGCTATCAACAGTTGCTTCGGGTTTCACCATACCGTTAATTCTTC-TCACG-TTA 2808 |||||||||||||| |||||||| ||||||||||| ||||||||| ||| | || || Sbjct 2143 TTTAAAGCTATCAACGGTTGCTTCAGGTTTCACCATCCCGTTAATT-TTCCTTACTCTT- 2200 Query 2809 CTTTTTAGTGAGTATTGTCGGCAGAGGTTTGCGCCCATTTTCAACAAAAATCCTGCCCAG 2868 || |||||||||||||| ||||| || ||||| ||||| ||||| ||| |||| ||| || Sbjct 2201 CTATTTAGTGAGTATTGCCGGCAAAGATTTGCACCCATATTCAAGAAATATCCAGCCGAG 2260 Query 2869 GTTCTCATAGATATGGACAGAGCTGATGAAAT-ATCAGGAAAGATGGAAGAGTTACATAA 2927 |||| || | |||||||||||| ||||| || | ||||||||||||||||| ||||||| Sbjct 2261 ATTCTTATCGCTATGGACAGAGCAGATGAGATGA-CAGGAAAGATGGAAGAGATACATAA 2319 Query 2928 AAAATTGCATAA--TGTATACTCGCAGATACCATTACAC-T-CTCAGAAATCATCGAGTA 2983 || ||| | || || |||||| ||||||||| || | || || |||| ||| | Sbjct 2320 CAACTTG-A-AAGCTGCATACTCTCAGATACCA--ACGTGTTCTGAGGAATC---GAGCA 2372 Query 2984 AAGCTGAATGT-AGTAATCCTTTCAAAAAGCAGGAGTTACCAGATCCTGAAAAATTGAAG 3042 |||||| | | | | ||||| | | | ||||||||||||||| ||||| | ||||| Sbjct 2373 AAGCTGGTT-TCACTTCTCCTTGCTCAGATCAGGAGTTACCAGATTCTGAACAGTTGAAA 2431 Query 3043 CCAGAG 3048 || ||| Sbjct 2432 CCTGAG 2437 > Ahg475383 jgi|Araly1|475383|fgenesh2_kg.2__513__AT1G59406.1 Length=1053 Score = 1393 bits (754), Expect = 0.0 Identities = 824/858 (96%), Gaps = 4/858 (0%) Strand=Plus/Plus Query 1 ATGAAGCTTCAAATTCTATTGCTTGCTTTGGTTTTAATCGCT-GTTGAAGCGAATGCAGT 59 ||||||||||||||||||| ||| |||||||||||||||| | |||||||| |||||||| Sbjct 4 ATGAAGCTTCAAATTCTATGGCTCGCTTTGGTTTTAATCG-TCGTTGAAGCTAATGCAGT 62 Query 60 CAAGCAAGGGATAAACGCAACGATCCCAGCGCTAATAGTTTTTGGAGATTCAATAATGGA 119 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 63 CAAGCAAGGGATAAACGCAACGATCCCGGCGCTAATAGTTTTTGGAGATTCAATAATGGA 122 Query 120 TACAGGAAATAACAATAATCTTCCGACTCTTCTTAAATGTAACTTTCCTCCATATGGTAA 179 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 123 TACAGGAAATAACAATAATCTTCCCACTCTTCTTAAATGTAACTTCCCTCCATATGGTAA 182 Query 180 AGATTATCCTGGAGGCGACGCCACTGGAAGATTTTCTGATGGAAGAGTTCCTTCTGATCT 239 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 183 AGATTATCCTGGAGGCTTTGCCACTGGAAGATTTTCTGATGGAAGAGTTCCTTCTGATCT 242 Query 240 TATTGCGGAAAAGTTGGGATTGGCTAAGACATTACCAGCATATATGAATTCATATTTGAA 299 |||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 243 TATTGCCGAAAAGTTGGGATTGTCTAAGACATTACCAGCATATATGAATCCATATTTGAA 302 Query 300 GCCTGAGGATCTTCTTAAAGGTGTAACATTTGCATCTCGAGGAACTGGTTATGATCCATT 359 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 303 GCCTGAGGATCTTCTTAAAGGTGTAACATTTGCATCTGGAGGAACTGGTTATGATCCTTT 362 Query 360 GACAGCAAAAATTATGTCAGTGATATCGGTATGGGATCAACTCATATATTTCAAAGAATA 419 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 363 GACAGCTAAAATTATGTCAGTGATATCGGTGTGGGATCAACTCATATATTTCAAAGAATA 422 Query 420 TATATCAAAGATCAAGAGGCATTTCGGAGAAGAAAAAGCCAAAGATATCTTGGAACATAG 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 423 TATATCAAAGATCAAGAGGCATTTCGGAGAAGAAAAAGCCAAAGAAATCTTGGAACATAG 482 Query 480 TTTCTTTCTTGTGGTGTCTAGTAGCAATGACCTTGCTCACACTTATTTAGCTCAAGCTCA 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 483 TTTCTTTCTTGTGGTGTCTAGTAGCAATGACCTTGCTCACACTTATTTAGCTCAAGCTCA 542 Query 540 TAGATATGACCGTACCTCTTATGCCAATTTCTTGGCTGACTCTGCTGTCCATTTCGTGAG 599 ||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 543 TAGATATGATCGTATCTCTTACGCCAATTTCTTGGCTGATTCTGCTGTCCATTTCGTGAA 602 Query 600 AGAATTACATAAGCTTGGAGCTCGAAAAATTGGAGTGTTTAGTGCAGTCCCCGTTGGTTG 659 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 603 AGAATTACATAAGCTTGGAGCTCGGAAAATTGGAGTGTTTAGTGCAGTCCCCGTTGGTTG 662 Query 660 TGTTCCA-TTACAAAGAACAGTTTTTGGAGGtttttttACAAGAGGATGTAATGAACCTC 718 |||||| || |||||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct 663 TGTTCCTCTT-CAAAGAACAGTTTTTGGAGGGTTTTTTACAAGAGGATGTAATCAACCTC 721 Query 719 TAAACAACATGGCAAAACAATTCAACGCAAGACTTTCTCCAGCATTAGATTCTTTAGATA 778 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 722 TAAACAACATGGCAAAACAATTCAACGCAAGACTTTCTCCGGCACTAGATTCTTTAGATA 781 Query 779 AAGAGTTGGATGGTGTTATCCTTTACATTAATGTTTATGATACTCTTTTTGACATGATCC 838 |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 782 AAGAGTTGGATGGTGTCATCCTTTACATTAATGTTTATGATACTCTTTTCGACATGATCC 841 Query 839 AACACCCTAAAAAATACG 856 |||||||||||||||||| Sbjct 842 AACACCCTAAAAAATACG 859 > Ahg907559 jgi|Araly1|907559|Al_scaffold_0002_640 Length=1050 Score = 1356 bits (734), Expect = 0.0 Identities = 819/859 (95%), Gaps = 10/859 (1%) Strand=Plus/Plus Query 1 ATGAAGCTTCAAATTCTATTG-CTTGCTTTGGTTTTAATCGCTGTTGAAGCGAATGCAGT 59 |||||||||||||||||| || || ||||||||||||||||| ||||||| ||||||| Sbjct 1 ATGAAGCTTCAAATTCTA-TGTCTCGCTTTGGTTTTAATCGCCATTGAAGCTAATGCAGC 59 Query 60 CAAGCAAGGGATAAACGCAACGATCCCAGCGCTAATAGTTTTTGGAGATTCAATAATGGA 119 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 60 CAAGCAAGGGATAAACGCAACGATCCCGGCACTAATAGTTTTTGGAGATTCAATAATGGA 119 Query 120 TACAGGAAATAACAATAATCTTC-CGACTCTTCTTAAATGTAACTTTCCTCCATATGGTA 178 ||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||| Sbjct 120 TACAGGAAATAACAATAATCTTCAC-ACTCTTCTTAAATGTAACTTCCCTCCATATGGTA 178 Query 179 AAGATTATCCTGGAGGCGACGCCACTGGAAGATTTTCTGATGGAAGAGTTCCTTCTGATC 238 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 179 AAGATTATCCTGGAGGCTTCGCCACTGGAAGATTTTCTGATGGAAGAGTTCCTTCTGATC 238 Query 239 TTATTGCGGAAAAGTTGGGATTGGCTAAGACATTACCAGCATATATGAATTC-ATATTTG 297 ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| Sbjct 239 TTATTGCGGAAAAGTTGGGATTGGCTAAGACATTACCAGCATATATGAAC-CGAAATTTG 297 Query 298 AAGCCTGAGGATCTTCTTAAAGGTGTAACATTTGCATCTCGAGGAACTGGTTATGATCCA 357 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 298 AAGCCTGAGGATCTTCTTAAAGGTGTAACATTTGCATCTGGAGGAACTGGTTATGATCCT 357 Query 358 TTGACAGCAAAAATTATGTCAGTGATATCGGTATGGGATCAACTCATATATTTCAAAGAA 417 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 358 TTGACAGCTAAAATTATGTCAGTGATATCGGTGTGGGATCAACTCATATATTTCAAAGAA 417 Query 418 TATATATCAAAGATCAAGAGGCA-TTTCGGAGAAGAAAAAGCCAAAGATATCTTGGAACA 476 ||||||||||||||||||| ||| ||| |||||||||||||||||||| ||||||||||| Sbjct 418 TATATATCAAAGATCAAGAAGCACTTT-GGAGAAGAAAAAGCCAAAGAAATCTTGGAACA 476 Query 477 TAGTTTCTTTCTTGTGGTGTCTAGTAGCAATGACCTTGCTCACACTTATTTAGCTCAAGC 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 477 TAGTTTCTTTCTTGTGGTGTCTAGTAGCAATGACCTTGCTCACACTTATTTAGCTCAAGC 536 Query 537 TCATAGATATGACCGTACCTCTTATGCCAATTTCTTGGCTGACTCTGCTGTCCATTTCGT 596 |||| ||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||| Sbjct 537 TCATCGATATGATCGTACTTCTTACGCCAATTTCCTGGCTGACTCTGCTGTCCATTTCGT 596 Query 597 GAGAGAATTACATAAGCTTGGAGCTCGAAAAATTGGAGTGTTTAGTGCAGTCCCCGTTGG 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 597 GAGAGAATTACATAAGCTTGGAGCTCGAAAAATTGGAGTGTTTAGTGCAGTCCCTGTTGG 656 Query 657 TTGTGTTCCATTACAAAGAACAGTTTTTGGAGGtttttttACAAGAGGATGTAATGAACC 716 |||||||||| | ||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 657 TTGTGTTCCACTCCAAAGAACAGTTTTTGGAGGTTTTTTTACAAGAAGATGTAACCAACC 716 Query 717 TCTAAACAACATGGCAAAACAATTCAACGCAAGACTTTCTCCAGCAT-TAGATTCTTTAG 775 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 717 TCTAAACAACATGGCAAAACAATTCAACGCAAGACTTTCTCCAGC-TCTAGATTCTTTAG 775 Query 776 ATAAAGAGTTGGATGGTGTTATCCTTTACATTAATGTTTATGATACTCTTTTTGACATGA 835 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 776 ATAAAGAGTTGGATGGTGTTATTCTTTACATTAATGTTTATGATACTCTTTTTGACATGA 835 Query 836 TCCAACACCCTAAAAAATA 854 ||||||||||||||||||| Sbjct 836 TCCAACACCCTAAAAAATA 854 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 136474456778 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5