BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G60170.1 Length=1819 Score E Sequences producing significant alignments: (Bits) Value Ahg475301 jgi|Araly1|475301|fgenesh2_kg.2__431__AT1G60170.1 2468 0.0 Ahg342933 jgi|Araly1|342933|fgenesh1_pg.C_scaffold_3002696 880 0.0 Ahg331322 jgi|Araly1|331322|fgenesh1_pm.C_scaffold_8000665 878 0.0 Ahg316028 jgi|Araly1|316028|fgenesh1_pm.C_scaffold_2001061 342 5e-93 Ahg339268 jgi|Araly1|339268|fgenesh1_pg.C_scaffold_2001367 333 3e-90 > Ahg475301 jgi|Araly1|475301|fgenesh2_kg.2__431__AT1G60170.1 Length=1771 Score = 2468 bits (1336), Expect = 0.0 Identities = 1584/1698 (93%), Gaps = 39/1698 (2%) Strand=Plus/Plus Query 139 ATGGCAACTCTTGAAGATTCTTTCCTTGCTGAT-TTGGACGAGTTATCTGACAATGAAGC 197 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 96 ATGGCAACTCTTGAAGATTCTTTCCTTGCTGATCTT-GACGAGTTATCTGACAATGAAGC 154 Query 198 AGAATTGGACGAGAATGATGGTGATGTTGGAAAGGAAGAAGAAGATGTTGATATGGATAT 257 ||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| Sbjct 155 AGAATTGGACGAGAACGATGGTGATGTTGGCAAGGAGGAAGAAGATGTTGACATGGATAT 214 Query 258 GGCTGATTTAGAGACACTTAACTATGATGATCTCGATAATGTTTCTAAGCTGCAGAAGAG 317 ||| |||||||||||||||||||| ||||||||||||| |||||||||||| ||||| || Sbjct 215 GGCGGATTTAGAGACACTTAACTACGATGATCTCGATAGTGTTTCTAAGCTTCAGAAAAG 274 Query 318 TCAGAGATATGCTGATATTATGCATAAAGTAGAGGAGGCTCTTGGGAAAGATTCTGATGG 377 |||||||||| ||||||||||||| |||||||||||||||||| | ||| Sbjct 275 TCAGAGATATACTGATATTATGCAAAAAGTAGAGGAGGCTCTT------G-----GAT-- 321 Query 378 AGCTGAGAAAGGAACTGTCTTGGAAGATGATCCTGAGTATAAGCTTATTGTGGATTGTAA 437 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 322 --CTGAGAAAGGAACTGTGTTGGAAGATGATCCTGAGTACAAGCTTATTGTGGATTGTAA 379 Query 438 TCAGCTTTCGGTCGATATTGAGAATGAAATCGTTATTGTCCACAACTTTATCAAAGACAA 497 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 380 TCAGCTCTCTGTTGATATTGAGAATGAAATCGTTATTGTCCACAACTTTATCAAAGACAA 439 Query 498 GTACAAGCTTAAGTTTCAAGAGCTTGAGTCGTTGGTTCATCACCCTATTGACTATGCATG 557 ||||||||||||||||||||||||||||||||||||| ||||||| ||||| || || || Sbjct 440 GTACAAGCTTAAGTTTCAAGAGCTTGAGTCGTTGGTTAATCACCCAATTGATTACGCCTG 499 Query 558 TGTTGTGAAGAAGATTGGGAATGAGACGGATTTGGCTCTTGTTGATCTCGCTGACCTTCT 617 ||||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||||| Sbjct 500 TGTTGTGAAAAAGATTGGCAATGAGACGGATTTGACTCTTGTTGATCTTGCTGACCTTCT 559 Query 618 TCCTTCAGCTATTATCATGGTTGTTTCAGTTACTGCTTTAACTACGAAAGGGAG-TGCAC 676 ||| || ||||||||||||||| ||||||||||||||| ||| ||||||||||| | || Sbjct 560 TCCATCTGCTATTATCATGGTTATTTCAGTTACTGCTTCAACCACGAAAGGGAGCT-CAT 618 Query 677 TGCCAGAGGATGTTTTGCAAAAGGTGTTAGAGGCTTGTGATCGGGCT-TTAGATCTTGAT 735 ||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||||| Sbjct 619 TGCCAGAGGATGTCCTGCAAAAGGTGTTAGAGGCTTGTGACCGGGCTCTT-GATCTTGAT 677 Query 736 TCCGCAAGGAAGAAGGTCCTTGAGTTTGTTGAAAGTAAGATGGGATCTATTGCACCTAAT 795 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 678 TCTGCAAGGAAGAAGGTCCTTGAGTTTGTTGAAAGTAAGATGGGATCTATCGCACCTAAT 737 Query 796 CTTTCTGCTATTGTTGGGAGTGCTGTTGCAGCCAAACTCATGGGGACTGCTGGAGGTTTG 855 ||||| | ||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 738 CTTTCCACCATTGTTGGGAGTGCTGTTGCAGCGAAGCTCATGGGGACTGCTGGAGGTTTG 797 Query 856 TCAGCACTTGCTAAAATGCCTGCGTGTAATGTTCAAGTTCTTGGCCACAAGAGGAAGAAC 915 ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 798 TCAGCACTTGCTAAAATGCCTGCCTGTAATGTTCAAGTTCTTGGCCTCAAGAGGAAGAAT 857 Query 916 CTTGCTGGGTTTTCTTCTGCAACGTCTCAGTCCCGTGTGGGTTATCTGGAGCAGACAGAG 975 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 858 CTTGCTGGGTTCTCGTCTGCAACGTCACAGTCCCGTGTGGGTTATCTGGAGCAGACAGAG 917 Query 976 ATTTACCAAAGCACGCCTCCTGGACTTCAGGCTCGCGCTGGCAGGCTCGTGGCTGCAAAA 1035 |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct 918 ATTTTTCAAAGCACGCCTCCTGGACTTCGGGCTCGCGCTAGCAGGCTCGTGGCTGCAAAA 977 Query 1036 TCAACTTTGGCAGCAAGAGTTGATGCTACTAGAGGGGATCCGTTAGGGATAAGTGGAAAA 1095 || ||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||| Sbjct 978 TCGACTTTGGCAGCAAGAGTTGATGCTACTAGAGGGGACCCGACAGGGACAAGTGGAAAA 1037 Query 1096 GCTTTCAGGGAGGAGATCCGTAAGAAGATTGAGAAATGGCAAGAACCTCCTCCTGCAAGA 1155 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1038 GCTTTCAGGGAGGAGATCCGTAAGAAGATTGAGAAGTGGCAAGAACCTCCTCCTGCAAGG 1097 Query 1156 CAGCCTAAGCCACTTCCTGTTCCTGATTCTGAACCGAAGAAAAGAAGGGGTGGTCGCCGT 1215 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1098 CAGCCTAAGCCGCTTCCTGTTCCTGATTCTGAGCCGAAGAAAAGAAGGGGTGGTCGCCGT 1157 Query 1216 CTAAGAAAAATGAAAGAAAGGTAT-CAAGTAACAGATATGAGGAAGCTGGCCAACAGAAT 1274 |||||||||||||||||||||||| || |||||||| |||||||||||||||||||| || Sbjct 1158 CTAAGAAAAATGAAAGAAAGGTATGCA-GTAACAGACATGAGGAAGCTGGCCAACAGGAT 1216 Query 1275 GGCGTTTGGTACACCTGAAGAGAGCTCCCTCGGTGATGGACTAGGAGAAGGTTATGGAAT 1334 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1217 GGCGTTTGGTACACCTGAAGAGAGCTCCCTAGGTGATGGACTAGGAGAAGGTTATGGAAT 1276 Query 1335 GCTTGGCCAGGCAGGAAGCAACAGGCTGCGAGTATCCAGTGTTCCGAGCAAGCTTAAGAT 1394 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 1277 GCTTGGCCAGGCAGGTAGCAACAGGCTGCGAGTATCCAGTGTTCCGAGCAAGCTTAAAAT 1336 Query 1395 TAATGCTAAGGTCGCCAAAAAGCTTAAAGAAAGGCAGTATGCGGGTGGTGCGACTACCTC 1454 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1337 TAATGCTAAGGTCGCGAAAAAGCTTAAAGAAAGGCAGTATGCAGGTGGTGCGACTACCTC 1396 Query 1455 TGGTTTGACATCGAGCCTGGCTTTCACTCCTGTGCAGGGAATAGAGTTGTGCAATCCTCA 1514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1397 TGGTTTGACATCGAGCCTGGCTTTCACTCCTGTGCAGGGAATAGAGTTGTGCAATCCTCA 1456 Query 1515 GCAGGCTTTAGGATTAGGAAGTGGGACTCAAAGCACTTACTTCTCAGAGTCAGGAACCTT 1574 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1457 GCAAGCTTTAGGATTAGGCAGTGGGACTCAAAGCACTTACTTCTCAGAGTCAGGAACCTT 1516 Query 1575 CTCGAAGCTGAAGAAGATCTAAAATATGGAAGACAGAGATACAAG-TCTTGAAAAGCCGA 1633 |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| Sbjct 1517 CTCGAAGCTGAAGAAGATCTAAAATATGCAAGACAGAGATACAAGCTGTTGAAAAGCCGA 1576 Query 1634 GCACTA-AA-A----G-TGTAAAAATGAAACAAAGGTGGAAAGAAACTGCTTTCTCTATC 1686 |||||| || | | |||| |||||||||||||||||||||||||||||||||||||| Sbjct 1577 GCACTAGAAGATAATGGTGTATAAATGAAACAAAGGTGGAAAGAAACTGCTTTCTCTATC 1636 Query 1687 TCATGTCTGTTTTAAGGTTTCTT-CGGTCACTTAAGAGACAAAAGGCATTGTTTTGATCA 1745 || ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| Sbjct 1637 TC--GTCTGTTTTAAGGTTTCTTTCG-TCACTAAAGAGACAAAAGGCATTGTTTTGATCA 1693 Query 1746 CTCTTTGGAAACGTTTTATAAATTTTATTTTTGTATTAGAGCCATAC---C-TAAAGATC 1801 ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| Sbjct 1694 CTCTTTGGAAACGTTTTATAAATTTTATTTTTGTACTAGAGCCATACATACCTAAAGATC 1753 Query 1802 CATCTTCTTATTACCATC 1819 ||||||||||| |||||| Sbjct 1754 CATCTTCTTATCACCATC 1771 Score = 145 bits (78), Expect = 1e-33 Identities = 92/98 (94%), Gaps = 3/98 (3%) Strand=Plus/Plus Query 1 ATTCCTCTTCGCCTTCCTAAGGAAAAAACACTAGTCGCTCGCTGCTCTTCAATTTTCTTC 60 ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||| Sbjct 1 ATTCCTCTTCGCCTTCCAAAGG--AAAACACTAGTCGCTCGCTGCTCTTCAATTT-CTTC 57 Query 61 TCGAATCTAATCGATTGATTTCTCCTTCGATTCTTCAG 98 |||||||| |||||||||||||||||||||||||||| Sbjct 58 TCGAATCTGGTCGATTGATTTCTCCTTCGATTCTTCAG 95 > Ahg342933 jgi|Araly1|342933|fgenesh1_pg.C_scaffold_3002696 Length=1335 Score = 880 bits (476), Expect = 0.0 Identities = 809/964 (84%), Gaps = 46/964 (5%) Strand=Plus/Plus Query 647 TTACTGCTTTAACTACGAAAGGGAGTGCACTGCCAGAGGATGT-T-TTGCAAAAGGTGTT 704 ||||||||||||| || ||||||| |||| ||||| | || | | | |||| ||| Sbjct 404 TTACTGCTTTAACCACAAAAGGGAAACCACTTCCAGA-TA-GTATCCTACGAAAGACGTT 461 Query 705 AGAGGCTTGTGATCGGGCT-TTAGATCTTGATTCCGCAAGGAAGAAGGTCCTTGAGTTTG 763 ||| |||||||||| ||| || ||||||||||| |||||||| ||||| |||||||||| Sbjct 462 AGACGCTTGTGATCACGCTATT-GATCTTGATTCGGCAAGGAAAAAGGTTCTTGAGTTTG 520 Query 764 TTGAAAGTAAGATGGGATCTATTGCACCTAATCTTTCTGCTATTGTTGGGAGTGCTGTTG 823 ||||||| |||||||||||||| ||||| ||||| ||||||||||| ||||||||||||| Sbjct 521 TTGAAAGAAAGATGGGATCTATCGCACCAAATCTCTCTGCTATTGTCGGGAGTGCTGTTG 580 Query 824 CAGCCAAACTCATGGGGACTGCTGGAGGTTTGTCAGCACTTGCTAAAATGCCTGCGTGTA 883 ||||||| || |||| |||||||||||||| || |||||||| || |||||||| |||| Sbjct 581 CAGCCAAGCTTTTGGGAACTGCTGGAGGTTTATCGGCACTTGCGAACATGCCTGCTTGTA 640 Query 884 ATGTTCAAGTTCTTGGCCACAAGAGGAAGAACCTTGCT-GGGTTTTCTTCTGCAACGTCT 942 || ||| ||||||||||||||| |||||||||| || | || || ||| |||||| ||| Sbjct 641 ATCTTCTAGTTCTTGGCCACAACAGGAAGAACCATG-TCGGATTCTCTACTGCAATGTCA 699 Query 943 CAGTCCCGTGTGGGTTATCTGGAGCAGACAGAGATTTACCAAAGCACGCCTCCTGG-ACT 1001 ||||| |||| ||||||| |||||||||||||||||| ||||||||||||||| || ||| Sbjct 700 CAGTCTCGTGCGGGTTATTTGGAGCAGACAGAGATTTTCCAAAGCACGCCTCC-GGAACT 758 Query 1002 TCAGGCT-CGCGCTGGCAGGCTCGTGGCTGCAAAATCAACTTTGGCAGCAAGAGTTGATG 1060 ||| | |||||| |||| ||| ||||| ||||||| |||||||||||||||||||| | Sbjct 759 TCA-AATGCGCGCTAGCAGACTCTTGGCTTCAAAATCGACTTTGGCAGCAAGAGTTGACG 817 Query 1061 CTACTAGAGGGGATCCGT-TAGGGATAAGTGGAAAAGCTTTCAGGGAGGAGATCCGTAAG 1119 |||||||||| ||||| | | || | || || |||||||| |||||||| ||||| ||| Sbjct 818 CTACTAGAGGAGATCCATCT-GGAACAAACGGGAAAGCTTTGAGGGAGGAAATCCGCAAG 876 Query 1120 AAGATTGAGAAATGGCAAGAACCTCCTCCTGCAAGACAGCCTAAGCCACTTCCTGTTCCT 1179 || ||||| || |||||||||||||| |||||||| || | ||||||||||| ||||||| Sbjct 877 AATATTGACAAGTGGCAAGAACCTCCACCTGCAAGGCAACGTAAGCCACTTCATGTTCCT 936 Query 1180 GATTCTGAACCGAAGAAA-AGAAGGGGTGGTCGCCGTCTAAGAAAAATGAAAGAAAGGTA 1238 ||||||| || || ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 937 TATTCTGAGCCTAA-AAAGAGAAGGGGTGGTCGCCGTCTAAGAAAAATGAAAGAAAGGTA 995 Query 1239 TCAAGTAACAGATATGAGGAAGCTGGCCAACAGAATGGCGTTTGGTACACCTGAAGAGAG 1298 |||||| ||||| || || |||||||||||||| |||||||||||||||||||||||||| Sbjct 996 TCAAGTGACAGACATAAGAAAGCTGGCCAACAGGATGGCGTTTGGTACACCTGAAGAGAG 1055 Query 1299 CTCCCTCGGTGATGGACTAGG-AGAAGGTTATGGAATGCTTGGCCAGGCAGGAAGCAACA 1357 |||||| ||||||||| |||| | || |||||||||||||| ||||| || ||||| | Sbjct 1056 CTCCCTAGGTGATGGATTAGGTATC-GGATATGGAATGCTTGGTCAGGCTGGGAGCAATA 1114 Query 1358 GGCTGCGAGTATCCAGTGTTCCGAGCAAGCTTAA-GATTAATGCTAAGGTCGCCAAAAAG 1416 ||||||| | || ||| ||||||||| || | ||||||||||||||||||||||| Sbjct 1115 GGCTGCG--T-----GT-TTC-GAGCAAGCTGAAAG-TTAATGCTAAGGTCGCCAAAAAG 1164 Query 1417 CTTAAAGAAAGGCAGTATG-CGGGTGGTGCGACTACCTCTGGTTTGAC-A--TCGAGCCT 1472 | || |||| | | |||||| | ||||||||||||||||| | || || || Sbjct 1165 C-----GA----CAGT-TCACAGGTGGTTCTACTACCTCTGGTTTGACGACATCAAGTCT 1214 Query 1473 GGCTTTCACTCCTGTGCAGGGAATAGAGTTGTGCAATCCTCAGCAGGCTTTAGGATTAGG 1532 |||||| |||| |||||| |||||||||||||||||||||||| | | |||||||||| Sbjct 1215 GGCTTTTACTCTTGTGCAAGGAATAGAGTTGTGCAATCCTCAG--G-CATTAGGATTAGT 1271 Query 1533 AAGTGGGACTCAAAGCACTTACTTCTCAGAGTCAGGAACCTTCTCGAAGCTGAAGAAGAT 1592 ||| ||| |||||||||||||||||||||||| ||||| ||||| || || |||||||| Sbjct 1272 CAGTTGGATTCAAAGCACTTACTTCTCAGAGTCGGGAACTTTCTCCAAACTCAAGAAGAT 1331 Query 1593 CTAA 1596 ||| Sbjct 1332 TTAA 1335 > Ahg331322 jgi|Araly1|331322|fgenesh1_pm.C_scaffold_8000665 Length=1368 Score = 878 bits (475), Expect = 0.0 Identities = 791/943 (84%), Gaps = 24/943 (3%) Strand=Plus/Plus Query 405 TGATCCTGAGTATAAGCTTATTGTGGATTGTAATCAGCTTTCGGTCGATATTGAGAATGA 464 ||||||||| || || || || || ||||| |||||||| || || ||||||||||| || Sbjct 222 TGATCCTGAATACAAACTAATCGTAGATTGCAATCAGCTGTCAGTTGATATTGAGAACGA 281 Query 465 AATCGTTATTGTCCACAACTTTATCAAAGACAAGTACAAG-CTTAAGTTTCAAGAGCTTG 523 || || || ||||||||||||||| ||||||||| | | |||||| |||||||||| Sbjct 282 GATAGTCATCGTCCACAACTTTATCCGCGACAAGTAC-GGACGTAAGTTCCAAGAGCTTG 340 Query 524 AGTCGTTGGTTCATCACCCTATTGACTATGCATGTGTTGTGAAGAAGATTGGGAATGAGA 583 ||||| | | ||| |||| || || ||||| |||||||||| || ||||| ||||||| Sbjct 341 AGTCGCTAATACATGACCCAATCGATTATGCCCGTGTTGTGAAAAAAATTGGCAATGAGA 400 Query 584 CGGATTTGGCTCTTGTTGATCTCGCTGACCTTCTTC--CTT----CAGCTATTATCATGG 637 | ||||| | |||||| |||| | |||||||||| ||| |||| | ||| || Sbjct 401 CAGATTTAACCCTTGTTAATCTGGAAGACCTTCTTCTTCTTAAACCAGCGACTATTAT-T 459 Query 638 T-TGTTTCAGTTACTGCTTTAACTACGAAAGGGAGTGCACTGCCAGAGGATGTTTTGCAA 696 | ||||||| ||||||||||||| |||||||||| | || ||||||| ||| | | ||| Sbjct 460 TCTGTTTCACTTACTGCTTTAACCACGAAAGGGAATCCATTGCCAGATGATATCCTACAA 519 Query 697 AAGGTGTTAGAGGCTTGTGATCGGGCT-TTAGATCTTGATTCCGCAAGGAAGAAGGTCCT 755 ||| |||||| ||||||||||||||| ||| ||||||||||||||||||||||||| || Sbjct 520 AAGACGTTAGACGCTTGTGATCGGGCTCTTA-ATCTTGATTCCGCAAGGAAGAAGGTTCT 578 Query 756 TGAGTTTGTTGAAAGTAAGATGGGATCTATTGCACCTAATCTTTCTGCTATTGTTGGGAG 815 ||| ||| |||||||||||||||||| ||| ||||| ||||||||||| ||||| ||||| Sbjct 579 TGACTTTCTTGAAAGTAAGATGGGATATATCGCACCAAATCTTTCTGCCATTGTCGGGAG 638 Query 816 TGCTGTTGCAGCCAAACTCATGGGGACTGCTGGAGGTTTGTCAGCACTTGCTAAAATGCC 875 |||||||||||||| |||||||| |||||||||||||| | |||||||| |||||||| Sbjct 639 CGCTGTTGCAGCCAAGCTCATGGGAACTGCTGGAGGTTTAACGGCACTTGCAAAAATGCC 698 Query 876 TGCGTGTAATGTTCAAGTTCTTGGCCACAAGAGGAAGAACCTTG-CTGGGTTTTCTTCTG 934 ||| |||||||||| ||| ||||||||||||||||||||||||| | || || ||| ||| Sbjct 699 TGCCTGTAATGTTCTAGTACTTGGCCACAAGAGGAAGAACCTTGAC-GGATTCTCTACTG 757 Query 935 CAACGTCTCAGTCCCGTGTGGGTTATCTGGAGCAGACAGAGATTTACCAAAGCACGCCTC 994 ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 758 CAACGTCACAGTCCCGTGTGGGTTATCTGGAGCAGACAGAGATTTTTCAAAGCACGCCTC 817 Query 995 CTGGACTTCAGGCT-CGCGCTGGCAGGCTCGTGGCTGCAAAATCAACTTTGGCAGCAAGA 1053 ||||||||| | | |||||| |||||||| ||||| ||||||| |||||||| |||||| Sbjct 818 CTGGACTTC-GAATGCGCGCTAGCAGGCTCTTGGCTTCAAAATCGACTTTGGCGGCAAGA 876 Query 1054 GTTGATGCTACTAGAGGGGATCCGT-TAGGGATAAGTGGAAAAGCTTTCAGGGAGGAGAT 1112 ||||| ||||||||||| ||| | | | || | || || |||||||| |||||| | || Sbjct 877 GTTGACGCTACTAGAGGAGATGCATCT-GGAACAAACGGGAAAGCTTTGAGGGAGCAAAT 935 Query 1113 CCGTAAGAAGATTGAGAAATGGCAAGAACCTCCTCCTGCAA-GACAGCCTAAGCCACTTC 1171 ||| ||||| ||||| || |||||||||| |||||||| || | || |||| |||||||| Sbjct 936 CCGCAAGAATATTGACAAGTGGCAAGAACGTCCTCCTGGAAAG-CAACCTACGCCACTTC 994 Query 1172 CTGTTCCTGATTCTGAACCGAAGAA-AAGAAGGGGTGGTCGCCGTCTAAGAAAAATGAAA 1230 |||||||| ||||||| || || || || |||||||||||||||||||||||||| |||| Sbjct 995 CTGTTCCTTATTCTGAGCCTAAAAAGAA-AAGGGGTGGTCGCCGTCTAAGAAAAACGAAA 1053 Query 1231 GAAAGGTATCAAGTAACAGATATGAGGAAGCTGGCCAACAGAATGGCGTTTGGTACACCT 1290 |||||||||||||| ||||| || |||||| | ||||| || ||||||||||||||||| Sbjct 1054 GAAAGGTATCAAGTGACAGACATAAGGAAGTTAGCCAATAGGATGGCGTTTGGTACACCC 1113 Query 1291 GAAGAGAGCTCCCTCGGTGATGGACTA-GGAGAAGGTTATGGA 1332 ||||||||||| || ||||||||| || || || || |||||| Sbjct 1114 GAAGAGAGCTCTCTGGGTGATGGA-TATGGTGATGGATATGGA 1155 Score = 183 bits (99), Expect = 3e-45 Identities = 142/162 (88%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 1438 GGTGGTGCGACTACCTCTGGTTT---GACATCGAGCCTGGCTTTCACTCCTGTGCAGGGA 1494 |||||||| |||||||||||||| |||||| || ||||||||||||| |||||||||| Sbjct 1210 GGTGGTGCCACTACCTCTGGTTTGAGGACATCAAGTCTGGCTTTCACTCTTGTGCAGGGA 1269 Query 1495 ATAGAGTTGTGCAATCCTCAGCAGGCTTTAGGATTAGGAAGTGGGACTCAAAGCACTTAC 1554 |||||||||||||||||||| || | |||||||||| ||||||| |||||||| |||| Sbjct 1270 ATAGAGTTGTGCAATCCTCA--AG-CGATAGGATTAGGCAGTGGGAGTCAAAGCAGTTAC 1326 Query 1555 TTCTCAGAGTCAGGAACCTTCTCGAAGCTGAAGAAGATCTAA 1596 ||||||||||||||||| ||||| ||| | |||||||| ||| Sbjct 1327 TTCTCAGAGTCAGGAACTTTCTCCAAGTTCAAGAAGATTTAA 1368 > Ahg316028 jgi|Araly1|316028|fgenesh1_pm.C_scaffold_2001061 Length=510 Score = 342 bits (185), Expect = 5e-93 Identities = 416/520 (80%), Gaps = 46/520 (9%) Strand=Plus/Plus Query 256 ATGGCTGATTTAGAGACACTTAACTATGATGATCTCGATAATGTTTCTAAGCTGCAGAAG 315 ||||| || ||| ||||||||||||| ||||||||||||||| |||| ||||| || || Sbjct 1 ATGGCAGACTTAAAGACACTTAACTACGATGATCTCGATAATTTTTCAAAGCTACAAAAA 60 Query 316 AGTCAGAGATATGCTGATATTATGCATA-AAGTAGAGGAGGCTCTTGGGAAAGATTCTGA 374 ||||||||||||||||||| || ||| || | | | | | || |||| || Sbjct 61 AGTCAGAGATATGCTGATA-TA---ATACAA--A-A--A-G----T-GG-AAGAGGCT-C 103 Query 375 TGGAGCTGAGAAAGGAACTGTCTTGGAAGATGATCCTGAGTATAAGCTTATTGTGGATTG 434 | ||||||||||||||| || ||| | | | | | ||||| || | |||||| Sbjct 104 T-----TGAGAAAGGAACTGTATT---AGA-G-TAC--A--AGAAGCTAATCGAGGATTG 149 Query 435 TAATCAGCT-TTCGGTCGATATTGAGAATGAAATCGTTATTGTCCACAACTTTATCAAAG 493 ||||||||| || || ||||||||||||||||| || || || |||||||||||| | Sbjct 150 TAATCAGCTCTT-AGTTGATATTGAGAATGAAATAGTCATCGTTCACAACTTTATCCGTG 208 Query 494 ACAAGTACAAG-CTTAAGTTTCAAGAGCTTGAGTCGTTGGTTCATCACCCTATTGACTAT 552 | ||||| || |||||||||||||||||||||||||||||||||||||| || || ||| Sbjct 209 AGAAGTA-TAGACTTAAGTTTCAAGAGCTTGAGTCGTTGGTTCATCACCCAATCGATTAT 267 Query 553 GCAT-GTGTTGTGAAGAAGA-TTGGGAATGAGACGGATTTGGCTCTTGTTGATCTCGCTG 610 | | |||||||||| |||| |||| ||||||| ||| || | ||||||||||| | | Sbjct 268 GT-TCGTGTTGTGAA-AAGAATTGGCAATGAGATGGACTTAACCCTTGTTGATCTTGAAG 325 Query 611 ACCTTCTTCCTTCAGCTATTATCATGGTTGTTTCAGTTACTGCTTTAACTACGAAAGGGA 670 ||||||||| |||||||| ||||||||||||||||||||||||| ||| |||||||| | Sbjct 326 GCCTTCTTCCATCAGCTATGATCATGGTTGTTTCAGTTACTGCTTCAACCACGAAAGGTA 385 Query 671 GTGCA-CTGCC-AGAGGATGTTTTGC-AAAAGGTGTTAGAGGCTTGTGATCGGGCTTTAG 727 || ||||| | |||||||| ||| |||| | |||| |||||| |||||||| ||| Sbjct 386 AC-CAACTGCCTA-AGGATGTTCTGCTAAAAAC-GATAGATGCTTGTAATCGGGCTCTAG 442 Query 728 ATCTTGATTCCGCAAGGAAGAAGGTCCTTGAGTTTGTTGA 767 ||||||||||||||||||||||||||||||| |||||||| Sbjct 443 ATCTTGATTCCGCAAGGAAGAAGGTCCTTGACTTTGTTGA 482 > Ahg339268 jgi|Araly1|339268|fgenesh1_pg.C_scaffold_2001367 Length=1713 Score = 333 bits (180), Expect = 3e-90 Identities = 415/521 (80%), Gaps = 46/521 (9%) Strand=Plus/Plus Query 238 GAAGATGTTGATATGGATATGGCTGATTTAGAGACACTTAACTATGATGATCTCGATAAT 297 |||||| ||| |||||| ||||| || ||| ||||||||||||| ||||||||||||||| Sbjct 1132 GAAGATATTGGTATGGACATGGCAGACTTAAAGACACTTAACTACGATGATCTCGATAAT 1191 Query 298 GTTTCTAAGCTGCAGAAGAGTCAGAGATATGCTGATATTATGCATA-AAGTAGAGGAGGC 356 |||| ||||| || || ||||||||||||||||||| || ||| || | | | | Sbjct 1192 TTTTCAAAGCTACAAAAAAGTCAGAGATATGCTGATA-TA---ATACAA--A-A--A-G- 1240 Query 357 TCTTGGGAAAGATTCTGATGGAGCTGAGAAAGGAACTGTCTTGGAAGATGATCCTGAGTA 416 | || |||| || | ||||||||||||||| || ||| | | | | | Sbjct 1241 ---T-GG-AAGAGGCT-CT-----TGAGAAAGGAACTGTATT---AGA-G-TAC--A--A 1280 Query 417 TAAGCTTATTGTGGATTGTAATCAGCT-TTCGGTCGATATTGAGAATGAAATCGTTATTG 475 ||||| || | ||||||||||||||| || || ||||||||||||||||| || || | Sbjct 1281 GAAGCTAATCGAGGATTGTAATCAGCTCTT-AGTTGATATTGAGAATGAAATAGTCATCG 1339 Query 476 TCCACAACTTTATCAAAGACAAGTACAAG-CTTAAGTTTCAAGAGCTTGAGTCGTTGGTT 534 | |||||||||||| || ||||| || |||||||||||||||||||||||||||||| Sbjct 1340 TTCACAACTTTATCCGTGAGAAGTA-TAGACTTAAGTTTCAAGAGCTTGAGTCGTTGGTT 1398 Query 535 CATCACCCTATTGACTATGCAT-GTGTTGTGAAGAAGA-TTGGGAATGAGACGGATTTGG 592 |||||||| || || |||| | |||||||||| |||| |||| ||||||| ||| || Sbjct 1399 CATCACCCAATCGATTATGT-TCGTGTTGTGAA-AAGAATTGGCAATGAGATGGACTTAA 1456 Query 593 CTCTTGTTGATCTCGCTGACCTTCTTCCTTCAGCTATTATCATGGTTGTTTCAGTTACTG 652 | ||||||||||| | | ||||||||| |||||||| |||||||||||||||||||||| Sbjct 1457 CCCTTGTTGATCTTGAAGGCCTTCTTCCATCAGCTATGATCATGGTTGTTTCAGTTACTG 1516 Query 653 CTTTAACTACGAAAGGGAGTGCA-CTGCC-AGAGGATGTTTTGC-AAAAGGTGTTAGAGG 709 ||| ||| |||||||| | || ||||| | |||||||| ||| |||| | |||| | Sbjct 1517 CTTCAACCACGAAAGGTAAC-CAACTGCCTA-AGGATGTTCTGCTAAAAAC-GATAGATG 1573 Query 710 CTTGTGATCGGGCTTTAGATCTTGATTCCGCAAGGAAGAAG 750 ||||| |||||||| |||||||||||||||||||||||||| Sbjct 1574 CTTGTAATCGGGCTCTAGATCTTGATTCCGCAAGGAAGAAG 1614 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68295809285 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5