BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G62540.1 Length=1740 Score E Sequences producing significant alignments: (Bits) Value Ahg315143 jgi|Araly1|315143|fgenesh1_pm.C_scaffold_2000176 1679 0.0 Ahg475092 jgi|Araly1|475092|fgenesh2_kg.2__222__AT1G62560.1 1400 0.0 Ahg924738 jgi|Araly1|924738|scaffold_200299.1 1068 0.0 Ahg910977 jgi|Araly1|910977|Al_scaffold_0001_1231 291 2e-77 Ahg471366 jgi|Araly1|471366|fgenesh2_kg.1__1320__AT1G12160.1 228 1e-58 > Ahg315143 jgi|Araly1|315143|fgenesh1_pm.C_scaffold_2000176 Length=1386 Score = 1679 bits (909), Expect = 0.0 Identities = 1236/1393 (89%), Gaps = 26/1393 (2%) Strand=Plus/Plus Query 77 ATGGCACCAGC-TCAAAACCCGATCAGTTCTCAACACGTGGTAGTCATCGGAGCCGGAGC 135 |||| |||| | || |||||| |||| |||||||| |||| || || ||||||||||| Sbjct 1 ATGGAACCAACTTC-AAACCCAATCAACTCTCAACATGTGGCGGTGATTGGAGCCGGAGC 59 Query 136 AGCCGGTCTCGTAGCGGCTAGGGAGCTCAGTCGTGAAGGTCACACTGTTGTCGTATTAGA 195 |||||||||| || | ||||| |||||| ||||||||||||||| |||||||| || || Sbjct 60 AGCCGGTCTCATAACAGCTAGAGAGCTCCTTCGTGAAGGTCACACCGTTGTCGTCTTTGA 119 Query 196 GCGGGAGAAAGAAGTAGGAGGTCTCTGGATCTATTCACCCAAAGCCGAATCCGACCCGCT 255 |||||||||||||| |||||||| |||||||||||||| ||| |||||||||||||||| Sbjct 120 ACGGGAGAAAGAAGTGGGAGGTCTTTGGATCTATTCACCTAAAACCGAATCCGACCCGCT 179 Query 256 TAGCCTTGA-CCCAACCCGTTCCATAGTCCACTCGAGCGTGTACGAGTCTCTCCGAACCA 314 |||||| || || || ||| | ||||||||| |||||||| ||||||||||||||||||| Sbjct 180 TAGCCTCGATCCGAA-CCGATACATAGTCCATTCGAGCGTCTACGAGTCTCTCCGAACCA 238 Query 315 ACCTCCC-ACGAGAATGTATGGGTTTCACGGAC-TTCCCTTTTGTGCCTCGTTTCGATGA 372 | |||| | ||||| | |||||| ||| |||| ||||||||| |||| ||||| ||||| Sbjct 239 ATGTCCCGA-GAGAAAGCATGGGTGTCAGGGACTTTCCCTTTT-TGCCACGTTTTGATGA 296 Query 373 CGAGTCAAGAGACTCGAGACGGTATCCGAGCCACATG-GAAGTTCTTGCGTACCTTCAAG 431 | ||||||||| |||||||||| ||||| |||| | |||||||||||||||||||||| Sbjct 297 TGTCTCAAGAGACCCGAGACGGTACCCGAGTCACA-GAGAAGTTCTTGCGTACCTTCAAG 355 Query 432 ACTTTGCTAGAGAGTTTAACCTAGAGGAGATGGTTCGGTTCGAGATCGAGGTGGTTCGGG 491 ||||||||||||||||||| ||||||| ||||| |||||||||| |||||| ||||| | Sbjct 356 ACTTTGCTAGAGAGTTTAAAATAGAGGACATGGTCCGGTTCGAGACCGAGGTCGTTCGAG 415 Query 492 TTGAACCGGTTAACGGGAAATGGAGGGTCTGGT-CTA-AAACCTCTGGCG-GTGTTTCCC 548 ||||||||||| ||||||||||||||||| ||| | | ||| || || | || |||| Sbjct 416 TTGAACCGGTTGACGGGAAATGGAGGGTCCGGTCCGAGAAA--TCGGGAGATTG-TTCCA 472 Query 549 ACGATGAGATCTTTGACGCCGTTGTTGTTTGCAGTGGACACTATACAGAACCAAACGTTG 608 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | Sbjct 473 ACGATGAGATCTTTGACGCCGTTGTGGTTTGCAGTGGACATTATACAGAACCAAACGTCG 532 Query 609 CT-CATATTCCTGGTATAAAATCGTGGCCAGGAAAGCAGATCCATAGCCACAACTACAGA 667 | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 533 -TGCATATTCCTGGTATAAATTCGTGGCCAGGAAAGCAGATCCATAGCCACAACTACAGA 591 Query 668 GTTCCTGGGCCATTCGAAAACGAGGTGGTGGTGGTCATCGGAAATTTTGCTAGCGGTGCC 727 |||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||| Sbjct 592 GTTCCTGGTCCATTCGAAAACGAGGTGGTGGTAGTGATCGGAAATTTTGCAAGCGGTGCT 651 Query 728 GATATTAGTAGGGACATAGCTAAGGTCGCGAAAGAAGTTCACATTGCATCTAGAGCGAGT 787 ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| Sbjct 652 GATATTAGTAGGGACATAGCTCAGGTCGCGAAAGAAGTTCATATTGCGTCTAGAGCGAGT 711 Query 788 GAATTTGATACATACGAAAAGCTTCCCGTGCCTCGGAACAATCTATGGATTCATTCGGAA 847 |||| |||||||||| |||||||||| ||||||| ||||| |||||||||||||| || Sbjct 712 GAATCTGATACATACAAAAAGCTTCCTGTGCCTCATAACAACCTATGGATTCATTCCGAG 771 Query 848 ATAGACACGGCATATGAAGATGGGTCCATTGTTTTCAAAAACGGGAAGGTGGTATATGCT 907 |||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 772 ATAGACACCGCCCATGAAGATGGGTCAATTGTTTTTAAAAACGGGAAGGTGGTATATGCA 831 Query 908 GATAGCATTGTGTATTGCACTGGATATAAATATCGCTTCACATTCCTTGAAACCAATGGC 967 ||||||||||| |||||||||||||| || |||| |||| |||| ||||||||||||||| Sbjct 832 GATAGCATTGTATATTGCACTGGATACAAGTATCACTTCCCATTTCTTGAAACCAATGGC 891 Query 968 TATATGAACATTGATGAAAACCGCGTAGAACATCTATACAAGCATGTATTTCCACCTGCG 1027 ||||||| |||||||||||||||| | || | ||||||||||||||| |||||||| ||| Sbjct 892 TATATGAGCATTGATGAAAACCGCATTGATCCTCTATACAAGCATGTTTTTCCACCCGCG 951 Query 1028 CTTTCTCCTGGTCTTTCATTCGTTGGTTTACCATCGATGGGCATACAATTTGTTATGTTT 1087 ||| | ||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||| Sbjct 952 CTTGCCCCTGGTCTTTCTTTCATTGGTTTACCAGCGATGGGCATACAGTTTGTTATGTTT 1011 Query 1088 GAAATCCAAAGCAAATGGGTGGCAGCAGTCTTGTCAAGG-CGGGTTACACTTCCCACAGA 1146 ||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||| || | Sbjct 1012 GAAATCCAAAGCAAATGGGTGGCAGCAGTCTTGGC-AGGACGGGTTAAACTTCCCTCACA 1070 Query 1147 AGATAAGATGATGGAAGATATTAGTGCGTGGTATGCATCGCTTGATGCGGTAGG-CATTC 1205 |||||||||||| ||||| |||| | ||||||||||||||||| ||||| |||| | ||| Sbjct 1071 AGATAAGATGATAGAAGACATTAATTCGTGGTATGCATCGCTTCATGCGTTAGGTC-TTC 1129 Query 1206 CTAAAAGATATACACATAAATTGGGTAAAATTCAGAGTGAGTACCTCAATTGGGTCGCAG 1265 | ||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| | Sbjct 1130 CCAAAAGATATACACATAAATTGGGTAAAATTCAGTCTGAGTACCTGAATTGGATCGCGG 1189 Query 1266 AAGAATGTGGTTGTCCGCTCGTTGAACATTGGAGAAATCAACAAATCGTCCGCGGATACC 1325 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1190 AAGAATGTGGATGTCCGCTCGTTGAACATTGGAGAAATCAACAAATCGTCCGCGGATACG 1249 Query 1326 AGAGACTTGTCTCACACCCAGAAACTTATCGCGATGAATGGGACGACAATGACCTTATGG 1385 ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1250 AGAGACTTGTCTCCCAACCAGAAACTTATCGCGATGAATGGGACGACAATGATCTTATGG 1309 Query 1386 AAGAAGCTTACGAGGACTTTGCTAGGAAGAAATTAATTAGTT-TCCATCCTTCCCATATC 1444 ||||||||||| |||| |||| |||||| || |||||||||| || ||||||||||| || Sbjct 1310 AAGAAGCTTACAAGGAATTTGGTAGGAATAAGTTAATTAGTTCTC-ATCCTTCCCATTTC 1368 Query 1445 CTCT-AATCAAGA 1456 || | || ||||| Sbjct 1369 CT-TGAACCAAGA 1380 > Ahg475092 jgi|Araly1|475092|fgenesh2_kg.2__222__AT1G62560.1 Length=1414 Score = 1400 bits (758), Expect = 0.0 Identities = 1171/1372 (85%), Gaps = 22/1372 (2%) Strand=Plus/Plus Query 77 ATGGCACCAGCTCAAAACCCGATCAGTTCTCAACACGTGGTAGTCATCGGAGCCGGAGCA 136 ||||||||||| |||||||| |||| |||| ||||||||| ||| ||||||||||||||| Sbjct 1 ATGGCACCAGCACAAAACCCAATCACTTCTAAACACGTGGCAGTGATCGGAGCCGGAGCA 60 Query 137 GCCGGTCTCGTAGCGGCTAGGGAGCTCAGTCGTGAAGGTCACACTGTTGTCGTATTA-GA 195 |||||| || || || ||||||||||| ||||||||||||||| ||| || || || || Sbjct 61 GCCGGTATCATAACGTCTAGGGAGCTCCGTCGTGAAGGTCACAGTGTCGTTGT-GTATGA 119 Query 196 GCGGGAGAAAGAAGTAGGAGGTCTCTGGATCTATTCACCCAAAGCCGAATCCGACCCGCT 255 ||||||||| |||| || ||||||||| | || |||| ||| |||| |||||||| || Sbjct 120 ACGGGAGAAACAAGTGGGTGGTCTCTGGGTTTACACACCTAAATCCGATTCCGACCCACT 179 Query 256 TAGCCTTGACCCAACCCGTTCCATAGTCCACTCGAGCGTGTACGAGTCTCTCCGAACCAA 315 |||||||||||| ||||| |||| ||||||||| ||| | |||||||||||||||||||| Sbjct 180 TAGCCTTGACCCGACCCGATCCAAAGTCCACTCTAGCATCTACGAGTCTCTCCGAACCAA 239 Query 316 CCTCCC-ACGAGAATGTATGGGTTTCACGGACTTCCC-TTTTGTGCCTCGTTTCGATGAC 373 |||| | ||||| |||||||| ||| ||||||||| |||| |||| ||||| |||||| Sbjct 240 TGTCCCGA-GAGAAAGTATGGGTGTCAGGGACTTCCCGTTTT-TGCCACGTTTTGATGAC 297 Query 374 GAGTCAAGAGACTCGAGACGGTATCCGAGCCACATGGAAGTTCTTGCGTACCTTCAAGAC 433 |||||||||||| ||||||||||||| | |||| ||||||||||||||| |||||||| Sbjct 298 GAGTCAAGAGACCCGAGACGGTATCCAAATCACAGGGAAGTTCTTGCGTATATTCAAGAC 357 Query 434 TTTGCTAGAGAGTTTAACCTAGAGGAGATGGTTCGGTTCGAGATCGAGGTGGTTCGGGTT 493 ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||| Sbjct 358 TTTGCTAGAGAGTTTAAAATAGAGGAGATGATCCGGTTCGAGACCGAGGTGGTTCGGGTT 417 Query 494 GAACCGGTTAACGGGAAATGGAGGGTCTGGTCTAAAACCTCTGGCGGTGTT-TCCCACGA 552 ||||||||| | ||||||||||||||| ||| |||| || ||||| ||| | | || Sbjct 418 GAACCGGTTGATGGGAAATGGAGGGTCCAGTCCAAAAAATCCGGCGG-GTTCTTGGAAGA 476 Query 553 TGAGATCTTTGACGCCGTTGTTGTTTGCAGTGGACACTATACAGAACCAAACGTTGCTCA 612 |||||||| ||||||||| || ||||||| |||||| ||||| ||||||||| || |||| Sbjct 477 TGAGATCTATGACGCCGTCGTGGTTTGCAATGGACATTATACTGAACCAAACATTACTCA 536 Query 613 TATTCCTGGTATAAAATCGTGGCCAGGAAAGCAGATCCATAGCCACAACTACAGAGTTCC 672 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 TATTCCTGGTATTAAATCGTGGCCAGGAAAGCAGATCCATAGCCACAACTACAGAGTTCC 596 Query 673 TGGGCCATTCGAAAACGAGGTGGTGGTGGTCATCGGAAATTTTGCTAGCGGTGCCGATAT 732 || ||||||||||||||||| |||||||| || ||||||||||| |||||||||||||| Sbjct 597 TGATCCATTCGAAAACGAGGTAGTGGTGGTGATTGGAAATTTTGCAAGCGGTGCCGATAT 656 Query 733 TAGTAGGGACATAGCTAAGGTCGCGAAAGAAGTTCACATTGCATCTAGAGCGAGTGAATT 792 ||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||| Sbjct 657 TAGTAGGGACATAGCTAAGGTCGCGAAAGAAGTCCACATTGCGTCTAGAGCAAGGGAACC 716 Query 793 TGATACATACGAAAAGCTTCCCGTGCCTCGGAACAATCTATGGATTCATTCGGAAATAGA 852 | |||||||| ||| || |||| || | ||||||||||||||| ||||| ||||| || Sbjct 717 CCACACATACGAGAAGATTTCCGTTCCCCAGAACAATCTATGGATGCATTCCGAAATCGA 776 Query 853 CACGGCATATGAAGATGGGTCCATTGTTTTCAAAAACGGGAAGGTGGTATAT-GCTGATA 911 ||| | |||| |||||||| |||||||||||||||||||| ||||||| | ||||||| Sbjct 777 CACAACCCATGAGGATGGGTCGATTGTTTTCAAAAACGGGAAAGTGGTAT-TCGCTGATA 835 Query 912 GCATTGTGTATTGCACTGGATATAAATATCGCTT-CACATTCCTTGAAACCAATGGCTAT 970 |||||||||||||||| || || |||||| ||| | |||| |||||||||||||||||| Sbjct 836 GCATTGTGTATTGCACCGGGTACAAATATAACTTTC-CATTTCTTGAAACCAATGGCTAT 894 Query 971 ATGAACATTGATGAAAACCGCGTAGAACATCTATACAAGCATGTATTTCCACCTGCGCTT 1030 || |||||||||||| ||||| |||| ||||||||||||||| |||||||| |||||| Sbjct 895 TTGCGCATTGATGAAAAACGCGTTGAACCTCTATACAAGCATGTCTTTCCACCCGCGCTT 954 Query 1031 TCTCCTGGTCTTTCATTCGTTGGTTTACCATCGATGGGCATACAATTTGTTATGTTTGAA 1090 | || || ||||| ||||| ||| ||||| | ||||| ||| || ||||||||||||| Sbjct 955 GCCCCCGGACTTTCTTTCGTAGGTGTACCAGCAATGGGGATAGTATATGTTATGTTTGAA 1014 Query 1091 ATCCAAAGCAAATGGGTGGCAGCAGTCTTGTCAAGG-CGGGTTACACTTCC--CAC-AGA 1146 ||||||||||||||||||||||||||||||||| || || ||||||||||| ||| ||| Sbjct 1015 ATCCAAAGCAAATGGGTGGCAGCAGTCTTGTCA-GGACGAGTTACACTTCCTTCACCAGA 1073 Query 1147 AGATAAGATGATGGAAGATATTAGTGCGTGGTATGCATCGCTTGATGCGGTAGGCATTCC 1206 | | || ||||| |||||||||| ||| |||||||| |||||||||||| |||| ||||| Sbjct 1074 A-A-AA-ATGATAGAAGATATTAATGCTTGGTATGCGTCGCTTGATGCGTTAGGTATTCC 1130 Query 1207 TAAAAGATATACACATAA-ATTGGGTAAAATTCAGAGTGAGTACCTCAATTGGGTCGCAG 1265 || ||| |||| |||| || || || ||||||||| ||| |||||||||||||||| | Sbjct 1131 CAAGAGACATACCCATACGATAGG-TAGAATTCAGAGGGAGCACCTCAATTGGGTCGCGG 1189 Query 1266 AAGAATGTGGTTGTCCGCTCGTTGAACATTGGAGAAATCAACAAATCGTCCGCGGATACC 1325 |||||||||||||| || ||||||| ||||||| |||| || | | | ||||||||| Sbjct 1190 AAGAATGTGGTTGTGAACTTGTTGAACGTTGGAGAGGTCAAGAAGTTGACGGCGGATACC 1249 Query 1326 AGAGACTTGTCTCACACCCAGAAACTTATCGCGATGAATGGGACGACAATGACCTTATGG 1385 ||||||||| | || ||||||||||| || ||||||||||||||| |||| ||||| | Sbjct 1250 TCAGACTTGTCGCCCATCCAGAAACTTACCGTGATGAATGGGACGACGATGAACTTATAG 1309 Query 1386 AAGAAGCTTACGAGGACTTTGCTAGGAAGAAATTAATTAGTTTCCATCCTTC 1437 ||||||| ||| | || ||| |||||||||| || |||||||| ||||||| Sbjct 1310 AAGAAGCGTACAAAGATTTTTCTAGGAAGAAGTTGATTAGTTTTGATCCTTC 1361 > Ahg924738 jgi|Araly1|924738|scaffold_200299.1 Length=1426 Score = 1068 bits (578), Expect = 0.0 Identities = 1124/1385 (81%), Gaps = 48/1385 (3%) Strand=Plus/Plus Query 77 ATGGCACCAGCTCAAAACCCGATCAGTTCTCAACACGTGGTAGTCATCGGAGCCGGAGCA 136 ||||||||||||| | || |||| |||||||||||||| || ||||||||||||||| Sbjct 21 ATGGCACCAGCTCCTAGTCCAATCAATTCTCAACACGTGGCGGTGATCGGAGCCGGAGCA 80 Query 137 GCCGGTCTCGTAGCGGCTAGGGAGCTCAGTCGTGAAGGTCACACTGTTGTCGT-ATTAGA 195 ||||| | ||||| || || |||||| |||||||||||||||| || || || || || Sbjct 81 TCCGGTTTAGTAGCCGCCAGAGAGCTCCGTCGTGAAGGTCACACCGTCGTTGTCCTT-GA 139 Query 196 GCGGGAGAAAGAAGTAGGAGGTCTCTGGATCTATTCACC-CAAAGCCGAATCCGACCCGC 254 || |||||| ||||||| ||||| ||| | || |||| ||| |||| |||||| || Sbjct 140 CCGAGAGAAACAAGTAGGTGGTCTTTGGGTTTACACACCTGAAA-CCGAGTCCGACGAGC 198 Query 255 TTA-GCCTTGACCCAACCCGTTCCATAGTCCACTCGAGCGTGTACGAGTCTCTCCGAACC 313 || | || ||||| ||||| ||||||| ||||||||||| |||||||||||||||||| Sbjct 199 -TAGGTCTCGACCCGACCCGACCCATAGTTCACTCGAGCGTCTACGAGTCTCTCCGAACC 257 Query 314 AACCTCCCACGAGAATGTATGGGTTTCACGGACTTCCCTTTTGTGCCTCGTTTCGATGA- 372 || |||||| ||||||||||||||| || ||| || || || ||||| ||| |||||| Sbjct 258 AATCTCCCAAGAGAATGTATGGGTTACAAGGATTTTCCGTTCGTGCCACGTGGCGATGAT 317 Query 373 CGAGTCAAGAGACTCGAGACGGTATCCGAGCCACATGGAAGTTCTTGCGTACCTTCAAGA 432 | |||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||| Sbjct 318 C-CGTCAAGAGACTCTAGAAGGTATCCGAGTCACAGGGAAGTTCTTGCGTACCTTCAAGA 376 Query 433 CTTTGCTAGAGAGTTTAACCTAGAGGAGATGGTTCGGTTCGAGATCGAGGTGGTTCGGGT 492 |||||||| |||||||||| ||||||||||| | |||||||||| ||||||||||||||| Sbjct 377 CTTTGCTACAGAGTTTAACATAGAGGAGATGATCCGGTTCGAGACCGAGGTGGTTCGGGT 436 Query 493 TGAACCGGTTAACGGGAAATGGAGGGTCTGGTCTAAAACCTCTGGCGGTGTTTCCCACGA 552 ||||||||||||||| |||||||||||| |||||||||| | |||||| ||||| | || Sbjct 437 TGAACCGGTTAACGGTAAATGGAGGGTCCAGTCTAAAACCGCCGGCGGTTTTTCCGAAGA 496 Query 553 TGAGATCTTTGACGCCGTTGTTGTTTGCAGTGGACACTATACAGAACCAAACGTTGCTCA 612 |||||||| |||||||||||| || ||| ||||||| | | ||||||||||| | ||||| Sbjct 497 TGAGATCTATGACGCCGTTGTGGTGTGCTGTGGACATTTTGCAGAACCAAACATCGCTCA 556 Query 613 TATTCCTGGTATAAAATCGTGGCCAGGAAAGCAGA-TCCATAGCCACAACTA-CAGAGTT 670 |||||||| || | || ||||| || ||||| | || | ||||||| || | ||||| Sbjct 557 AATTCCTGGAATTGAGTCATGGCCGGGGAAGCAAACTC-ACAGCCACAGTTATC-GAGTT 614 Query 671 CCTGGGCCATTCGAAA-ACGAGGTGGTGGTGGTCATCGGAAATTTTGCTAGCGGTGCCGA 729 |||| |||||| ||| | ||||| |||||||| ||||| |||||||| || || ||||| Sbjct 615 CCTGATCCATTC-AAAGATGAGGTAGTGGTGGTGATCGGGAATTTTGCGAGTGGAGCCGA 673 Query 730 TATTAGTAGGGACATAGCTAAGGTCGCGAAAGAAGTTCACATTGCATCTAGAGCGAGTGA 789 ||| ||||| |||||| |||| ||||| ||||||||||| || ||||||||||| ||| | Sbjct 674 TATCAGTAGAGACATATCTAAAGTCGCAAAAGAAGTTCATATCGCATCTAGAGCAAGTAA 733 Query 790 ATTTGATACATACGAAAAGCTTCCCGTGCCTCGGAACAATCTATGGATTCATTCGGAAAT 849 || || |||| |||||||| |||||| ||| |||||||||||||| || || || || Sbjct 734 ATCCGACACATTCGAAAAGCGTCCCGTACCTAATAACAATCTATGGATGCACTCTGAGAT 793 Query 850 AGACACGGCATATGAAGATGGGT-CCATTGTTTTCAAAAACGGGAAGGTGGTATATGCTG 908 |||||| || | || ||||| | |||||||||||||||| |||||||||||| |||||| Sbjct 794 AGACACCGCCCACGAGGATGG-TACCATTGTTTTCAAAAATGGGAAGGTGGTACATGCTG 852 Query 909 ATAGCATTGTGTATTGCACTGGATATAAATATCGCTT-CACATTCCTTGAAACCAATGGC 967 ||| |||||| |||| || || || || ||| ||| | |||| ||||||||||||| Sbjct 853 ATACCATTGTCCATTGTACAGGGTACAAGTATTACTTTC-CATTTCTTGAAACCAATGAT 911 Query 968 TATATGAACATTGATGAAAACCGCGTAGAACATCTATACAAGCATGTATTTCCACCTGCG 1027 ||||||| ||||||| |||||||| |||| ||| ||||||||| | |||||||| ||| Sbjct 912 TATATGAGGGTTGATGACAACCGCGTTGAACCTCTCTACAAGCATATTTTTCCACCGGCG 971 Query 1028 CTTTCTCCTGGTCTTTCATTCGTTGGTTTACCATCGATGGG-CATACAATT-TGTTATGT 1085 ||| |||| || ||||| ||| | ||||||||| | ||||| | ||||||| | | |||| Sbjct 972 CTTGCTCCCGGACTTTCTTTCATCGGTTTACCAGCAATGGGTC-TACAATTCTAT-ATGT 1029 Query 1086 TTGAAATCCAAAGCAAATGGGTGGCAGCAGTCTTGTCAAGG-CGGGTTACACTTCCCACA 1144 ||||| |||||||||||||||| | ||||| ||||| || || ||||||||||| | Sbjct 1030 TTGAAGTCCAAAGCAAATGGGTTTCTGCAGTTTTGTCT-GGACGAGTTACACTTCCTTCG 1088 Query 1145 GAAGAT-AAGATGATGGAAGATATTA-GTGCGTGGTATGCATCGCTTGATGCGGTAGGCA 1202 | ||| || |||||||| ||| ||| || || ||||| | | | || || |||| | Sbjct 1089 GTAGACGAA-ATGATGGACGATCTTAAGTT-GTCGTATGAAACACAAGAAGCATTAGGTA 1146 Query 1203 TTCCTAAAAGATATACACATAAATTGGGTAAAAT-TCAGAGTGAGTACCTCAATTGGGTC 1261 |||| |||||||||||||| || ||||||||| | |||| ||||||||||| ||||| || Sbjct 1147 TTCCCAAAAGATATACACACAAGTTGGGTAAA-TCTCAGTGTGAGTACCTCGATTGGATC 1205 Query 1262 GCAGAAGAATGTGGTTGTCCGCTCGT-T-GAACATTGGAGAAATCAACAAAT--CGTCCG 1317 ||||| ||||||| | ||| | | | | |||||||||||| ||||| || | | || | Sbjct 1206 GCAGACCAATGTGGAT-TCC-CACATGTCGAACATTGGAGAGATCAAGAAGTAAC-TC-G 1261 Query 1318 CGGATACCAGAGACTTG-TC-TCACACCCAGAAACTTATC-GCGATGAATGGGACGACAA 1374 ||| ||||||||||||| | ||| ||| |||||||| || | ||||||||||| ||| | Sbjct 1262 CGGTTACCAGAGACTTGGTAATCA-ACC-AGAAACTT-TCCGTGATGAATGGGATGACGA 1318 Query 1375 TGACCTTATGGAAGAAGCTTACGAGGACTTTGCTAGGA-AGAAAT-TAATTAGTTTCCAT 1432 ||| || ||||||||||| || || ||||| ||||| | | |||| | || ||||| ||| Sbjct 1319 TGATCTCATGGAAGAAGCGTATGAAGACTTCGCTAG-ACA-AAATCTGATCAGTTTTCAT 1376 Query 1433 CCTTC 1437 ||||| Sbjct 1377 CCTTC 1381 > Ahg910977 jgi|Araly1|910977|Al_scaffold_0001_1231 Length=1413 Score = 291 bits (157), Expect = 2e-77 Identities = 799/1099 (73%), Gaps = 84/1099 (8%) Strand=Plus/Plus Query 111 ACGTGGTAGTCATCGGAGCCGGAGCAGCCGGTCTCGTAGCGGCTAGGGAGC-TCAGTCGT 169 |||||| || |||||||||||||| ||||| || || |||||| | |||| || ||||| Sbjct 35 ACGTGGCCGTGATCGGAGCCGGAGCTGCCGGGCTTGTGGCGGCTCGAGAGCTTC-GTCGT 93 Query 170 GAAGGTCACACTGTTGTCGTATTAGAGCGGGAGAAAGAAGTAGGAGGTCTCTGGATCTAT 229 ||||| ||||| || || || ||||| ||||| |||||||||| || ||| | | | Sbjct 94 GAAGGGCACACCGTCACCGCCTTTGAGCGTCAGAAACAAGTAGGAGGACTTTGGGT-T-T 151 Query 230 TCAC-CCAAA-GCCGAATCC-GACCCGCTTAGCCTTGACCC-AACCCGTTCCATAGTCCA 285 ||| ||||| | || | || ||| | || | | | ||||| | || |||| ||||| Sbjct 152 ACACTCCAAATGTCG-AGCCAGACTCACTGAACATCGACCCGGA-TCGAACCATCGTCCA 209 Query 286 CTCGAGCGTGTACGAGTCTCTCCGAACCAACCTCCCACGAGAATGTATGGGTTTCACG-G 344 ||||||| | ||| | || ||||| ||||||||||||||||| |||||||||| || | | Sbjct 210 CTCGAGCATCTACCAATCCCTCCGCACCAACCTCCCACGAGAGTGTATGGGTTACA-GTG 268 Query 345 ACTTCCCTTTTGTG-CCTCGTTTCGATGACGAGTCAAGAGACTCGAGACGGTATCC-GAG 402 ||||||| |||||| || | ||| |||||| | || ||| |||||||||| || || Sbjct 269 ACTTCCCGTTTGTGACC-CAACCCGACGACGAGACCAGGGACCCGAGACGGTACCCGGA- 326 Query 403 CCACATGGAAGTTCTTG-CGTACCTTCAAGACTTTGCTAGAGAGTTT-A-ACCTAGAGGA 459 || | ||||| || || ||| || || ||||| || | ||||||| | | || | || Sbjct 327 TCAGAGGGAAG-TCATGAGGTATCTGCAGGACTTCGCCAAAGAGTTTGATA-TTA-ACGA 383 Query 460 GATGGTTCGGTTCGAGATC-GAGGTGGTT-CGGGTTGA----AC--CGGTTAAC-G--G- 507 |||| | || ||||||| | ||||| || || || || | ||| ||| | | Sbjct 384 GATGATCCGATTCGAGA-CAGAGGT-TTTGCGTGTGGAGCCGGCGGCGGAGAACAGTCGT 441 Query 508 GAAATGGAG-GGTCTGGTCTAAAACCTCTGGCGGTGTTTCCCACGATGAGATCTTTGACG 566 | ||||||| | || | || | ||| ||||| ||| ||| || ||||| || | Sbjct 442 G-AATGGAGAGTTC-AATTTAGGAGCTCAAATGGTGTCTCCGGCGAAGATATCTTCGATG 499 Query 567 CCGTTGTTGTTTGCAGTGGACACTAT-ACAGAACCAAACG--TTGCTCATATTCCTGGTA 623 | || || ||||||| ||| |||| | || || || || |||| |||||||||| | Sbjct 500 CAGTCGTAGTTTGCAATGGTCACT-TCACTGAGCC--TCGTCTTGCCCATATTCCTGTTC 556 Query 624 TAAAATCGTGGCCAGGAAAGCAGATCCATAGCCACAACTA-CAGAGTTCCTGGGCCATTC 682 | || |||||||||||||| |||||||||||||| || | | ||||| | |||||| Sbjct 557 TCTTGTCATGGCCAGGAAAGCAAATCCATAGCCACAATTATC-GTGTTCCAGATCCATTC 615 Query 683 GAAA-A-CGAGGTGGTGGTGGTCATCGGAAA-TTTTGCTAGCGG-TGCCGATATTAGTAG 738 ||| | | | |||||| | || || ||||| | | || || | |||||||| || Sbjct 616 -AAAGATC-AAGTGGTGATAGTGATAGGAAACCAAT-CCAGTGGAAG-TGATATTAGCAG 671 Query 739 GGACATAGCTAA-GGTCGCGAAAGAAGTTCACATTGCATCTAGAGC-GAGTGAATTTGAT 796 ||||||||| || | || |||||||| || |||||| ||| | | || || || || Sbjct 672 GGACATAGC-AACCTTGGCAAAAGAAGTCCATATTGCAGCTAAATCTGA-TGCATACGA- 728 Query 797 ACATACGAAAAGCTTCCCGTGCCTCGGAACAATCTATGGATTCATTCGGA-AATAGACAC 855 | | | | |||| || || | | | ||||||| ||||| || || || ||| | Sbjct 729 A-A-A-GGAAAG-TT-CCAT---TTATAGCAATCTACATATTCA-TCCGACGATTGAC-C 778 Query 856 G-GCATATGAAGATGGGTCCATTGTTTTCAAAAACGGGAAGGTGGTATATGCTGATAG-C 913 | | |||| ||||| || |||||||| || ||||||| ||||||| ||| ||| | | Sbjct 779 GCGTGTATGCGGATGGTTCGGTTGTTTTCCAAGACGGGAAAGTGGTATTTGCGGAT-GCC 837 Query 914 ATTGTGTATTGCACTGGATATAAATATCGCTTCACATTCCTTGAAACCAATGGCTATATG 973 || || ||||||| || || || ||| ||||| |||| |||||||| ||||| ||| || Sbjct 838 ATAGTACATTGCACCGGCTACAAGTATTGCTTCCCATTTCTTGAAACTAATGGTTATGTG 897 Query 974 AACATTGATGAAAACCGCG-TAGAACATCTATACAAGCATGTATTTCCACCTGCGCTTTC 1032 | | |||| || ||||| | | || ||| ||||||||||||| ||||| || |||||| | Sbjct 898 ACCGTTGAAGATAACCGTGTTGGACCAT-TATACAAGCATGTCTTTCCGCCAGCGCTTGC 956 Query 1033 TCCTGGTCTTTCATTCGTTGGTTTACCATCGATGGGC-ATACAATT-TGTTATGTTTGAA 1090 ||||| || || || | |||||||| || || ||| | ||||| | ||||||||||| Sbjct 957 CCCTGGCCTCTCCTTTATCGGTTTACCTTCAAT-GGCGTTGCAATTCT-TTATGTTTGAA 1014 Query 1091 ATCCAAAGCAAATGGGTGGCAGCAGTCTTGTCAAGG-CGGGTTACA-CTTCCCACAGAAG 1148 ||||||||||||||||| || | || || || || || |||| | ||||| | || | Sbjct 1015 ATCCAAAGCAAATGGGTCGCTTCGGTTTTATCG-GGTCGTGTTA-AGCTTCCGTCGGAGG 1072 Query 1149 ATAAGATGATGGAAGATAT 1167 | || |||||||||||||| Sbjct 1073 ACAAAATGATGGAAGATAT 1091 > Ahg471366 jgi|Araly1|471366|fgenesh2_kg.1__1320__AT1G12160.1 Length=1482 Score = 228 bits (123), Expect = 1e-58 Identities = 793/1102 (72%), Gaps = 103/1102 (9%) Strand=Plus/Plus Query 110 CACGTGGTAGTCATCGGAGC-CGGAGCAGCCGGTCTCGTAGCGGCTAGGGAGC-TCAGTC 167 ||||||| || |||||| | |||||| ||||| ||||| |||| | | |||| || ||| Sbjct 33 CACGTGGCCGTGATCGGA-CTCGGAGCCGCCGGGCTCGTGGCGGTTCGAGAGCTTC-GTC 90 Query 168 GTGAAGGTCACACTGTTGTC-GTATTAGAGCGGGAGAAAGAAGTAGGAGGTCTCTGGATC 226 ||||||||||||| || || || || ||||| |||||| | || || || |||||| | Sbjct 91 GTGAAGGTCACACCGTCATCGGT-TTCGAGCGTGAGAAACATGTTGGTGGACTCTGGGT- 148 Query 227 TATTCACCCA--AAGCCGAATCC-GACCCGCTTAGCCTTGACCC-AACCCGTTCCATAGT 282 | | ||| | || |||| || ||| | |||||| ||||||| | || |||| || Sbjct 149 T-TACACTGATCGAGTCGAA-CCAGACTCACTTAGCGTTGACCCGGA-TCGAACCATCGT 205 Query 283 CCACTCGAGCGTGTACGAGTCTCTCCGAACCAACCTCCCACGAGAATGTATGGGTTTCAC 342 ||||||||||| ||| | || ||||| || || || |||||||| |||||||||| || Sbjct 206 ACACTCGAGCGTCTACCAATCCCTCCGCACAAATCTACCACGAGAGTGTATGGGTTACA- 264 Query 343 G-GAC-TTCCCTTTTGT-GCCTCGTTTCGATGACGAGTCAAGAGACTCGAGACGGTATCC 399 | ||| ||||| || || || || | || ||| | | | ||| |||||||||| || Sbjct 265 GTGACTTTCCC-TTCGTAACC-CGATCCGGTGA-G-G----GCGACCCGAGACGGTACCC 316 Query 400 -GAGCCACATGGAAGTTCTTG-CGTACCTTCAAGACTTT-GCTAGAGAGTTTAACCTAGA 456 || || | ||||| ||||| |||||||||||| ||| || | |||||| || | || Sbjct 317 GGA-TCATAGGGAAG-TCTTGATGTACCTTCAAGA-TTTCGCCAAAGAGTTCAAGATCGA 373 Query 457 GGAGATGGTTCGGTTCGAGATC-GAGG---TG-GT-TCGG-GTTGA-ACC-G-G-TTAAC 505 || ||| | || ||||| | | |||| || || | || | || || | | |||| Sbjct 374 AGAAATGATCCGATTCGATA-CAGAGGTTTTGTGTGT-GGAGCCGACGCCGGAGAATAAC 431 Query 506 GGGAAATGGAG-GGTCTGGTCTAAAACCTCTGGCGGTGTTTCCCACGATGAGATCTTTGA 564 | || ||||| | || | ||||| ||| | ||||| ||| ||| || |||||||| Sbjct 432 CGTAATTGGAGTGTTC-AATTTAAAAGCTCAAGTGGTGTCTCCGGCGAAGAAATCTTTGA 490 Query 565 CGCCGTTGTTGTTTGCAGTGGACACTAT-ACAGAACCAAACG--TTGCTCATATTCCTGG 621 ||| || || ||||| | ||| |||| | || || || || ||||||| |||||||| Sbjct 491 CGCTGTCGTAGTTTGTAATGGTCACT-TCACTGAGCC--TCGTCTTGCTCACATTCCTGG 547 Query 622 TATAAAATCGTGGCCAGGAAAGCAGATCCATAGCCACAACTA-CAGAGTTCCTGGGCCAT 680 ||| | || ||||||||||||||||||||||||||||| || | || |||| | || Sbjct 548 GATAGAGTCATGGCCAGGAAAGCAGATCCATAGCCACAATTATCGGA-TTCCAGATTTAT 606 Query 681 TCGAAA-A-CGAGGTGGTGGTGGTCATCGGAAATTTTGCTAGCGGTGCCGATATTAGTAG 738 || ||| | | |||||||| | || || |||| | || || || ||| ||||||| Sbjct 607 TC-AAAGATC-AGGTGGTGATAGTTATAGGAAGTCAAGCCAGTGGAAACGACATTAGTAA 664 Query 739 GGACATAGCTAAGG-TCGCGAAAGAAGTTCACAT-TGCATCTAGAGCGAGT-GAATTTGA 795 |||||||| || | || ||||||||||| || | | |||| |||| || | || || Sbjct 665 AGACATAGC-AACCATTGCAAAAGAAGTTCATATCT-CGTCTAAAGCG-GTTGCATCCGA 721 Query 796 TACATACGAAAAGCTTCCCGTGCCTCGGAACAATCTATGGATTCATTCGGAA-ATAGACA 854 | |||||| ||| || | | | ||| ||| ||||||| | | ||| || Sbjct 722 TTCATACG----GCT----GTTAC--G-A-CAACCTACGGATTCACCCT-ACGATATAC- 767 Query 855 CG-GCATATGAAGATGGGTCCATTGTTTTCAAAAACGGGAAGGTGGTATATGCTGATAGC 913 || || || ||||| ||| | || ||| ||||||||| ||||| | ||||||| || Sbjct 768 CGCGCCCGCGAGGATGGTTCCGTGGTATTCCGAAACGGGAAAGTGGTTTTTGCTGAT-GC 826 Query 914 -ATTGTGT-ATTGCACTGGATATAAATATCGCTTCACATTCCTTGAAACCAATGGCTATA 971 || || | ||||||| || || || |||| ||| | || ||| ||| ||| || || Sbjct 827 TATAGT-TCATTGCACCGGTTACAAGTATCATTTCCCGTTTCTTAAAAACAACGGTTACG 885 Query 972 TGAACAT-T-GATGAAAACCGCGTAGAACATCTATACAAGCATGTATTTCC-ACCTGCGC 1028 | | | | | || || ||||| || | || || ||||||||||| ||||| ||| || Sbjct 886 TTA-C-TGTAGAAGATAACCGTGTTGGACCGCTCTACAAGCATGT-TTTCCCACCCGCA- 941 Query 1029 TTT-CTCCTGGTCTTTCATTCGTTGGTTTACCAT-CGATGGG-CATACAATT-TGTTATG 1084 ||| | ||||| | || || |||||||||| | | ||||| | | || || | ||||| Sbjct 942 TTTGCGCCTGGGATCTCCTTTATTGGTTTACCTTTC-ATGGGGCTT-CAGTTCT-TTATG 998 Query 1085 TTTGAAATCCAAAGCAAATGGGTGGCAGCAGTCTTGTCAAGG-CGGGTTACA-CTTCCCA 1142 |||||||| || ||||| ||||| || | || ||||| || ||||||| | ||||||| Sbjct 999 TTTGAAATACAGAGCAAGTGGGTTGCTTCGGTTTTGTCG-GGTCGGGTTA-AGCTTCCCA 1056 Query 1143 CAGAAGATAAGATGATGGAAGA 1164 |||| ||||||||||||||||| Sbjct 1057 CAGAGGATAAGATGATGGAAGA 1078 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65286679930 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5