BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G63350.1 Length=2697 Score E Sequences producing significant alignments: (Bits) Value Ahg338119 jgi|Araly1|338119|fgenesh1_pg.C_scaffold_2000218 1855 0.0 Ahg907240 jgi|Araly1|907240|Al_scaffold_0002_321 1288 0.0 > Ahg338119 jgi|Araly1|338119|fgenesh1_pg.C_scaffold_2000218 Length=3012 Score = 1855 bits (1004), Expect = 0.0 Identities = 2138/2659 (80%), Gaps = 184/2659 (7%) Strand=Plus/Plus Query 14 TCTCGATACCCTTT-GATCCGT-GTGTAAATAAAGTCTCTCAATGGCTAG-ACATG-AAA 69 |||| ||| ||||| |||| | | || |||||||||||||||||||||| | | | ||| Sbjct 20 TCTCAATA-CCTTTGGATCAATCG-GTGAATAAAGTCTCTCAATGGCTAGAAGA-GAAAA 76 Query 70 GTAAGTTATACTCACAACCTCGAGAAGAATCTTGTGGCTCTCGAGACAACCATGGAAGAG 129 | | ||||||||||||| ||||| |||||||| ||| | |||||||||||||||||| Sbjct 77 G-AGGTTATACTCACAATCTCGAAAAGAATCTCACAGCTTTGGAGACAACCATGGAAGAG 135 Query 130 CTCAAGGCCAAGCGGGATGATTTATTAAGAAAGCTCAAAAGAGAGGAGGATAGAGGTCTA 189 |||||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||| Sbjct 136 CTCAAGGCTAAGCGGGATGATTTGGAAAGAAAGCTCAGAAGAGAAGAGGATAGAGGTCTA 195 Query 190 CAAACGCTTGGCGAAATCAAGGTATGGCTTAATAGAGTTGAGACTA-TCGAAAG-CAGAG 247 |||| |||| |||| || ||||||||||||||||||||| || | | | ||| | | Sbjct 196 CAAAGGCTTTCCGAATTCCAGGTATGGCTTAATAGAGTTGCGA-AAGT-GGAAGATAAAT 253 Query 248 TCAATGA-TCTTCTTAATGCTAGAA-ATGCTGAACTTCAAAGGCTGTGCCTTTGTGGGTT 305 |||| | ||| ||| || || || ||| |||| || |||||||||||||||||||||| Sbjct 254 TCAA-CACCCTTGTTAGTGATA-AAGATGTTGAAATTAAAAGGCTGTGCCTTTGTGGGTT 311 Query 306 TTGCTCTAAGAGTTTAACGA-CGAGCTATCGTTATGGGAAAAGTGTTTTCTTGAAATTGA 364 ||| ||||||||||| || | ||||||||||||| ||||||| ||||||||||| ||| Sbjct 312 TTGTTCTAAGAGTTT-ACTATCGAGCTATCGTTACGGGAAAAATGTTTTCTTGACGTTG- 369 Query 365 GG-GAGGTTGAGAAACTCGAAAGGAGAGTTTTTGAAGTGATT-TCTGATCAAGCTTC-AA 421 || ||||||||||||||| |||| | || | || ||| |||| | || ||| | || || Sbjct 370 GGTGAGGTTGAGAAACTCAAAAGTAAAGATATTAAAGAGATTGT-TG-CCAAACCTCTAA 427 Query 422 CATCTGAGGTGGAGGAACA-ACAACTTCAACCGACAATTGTTGGTCAAGAAACAATGCTT 480 || ||||| |||||||| | || ||||||||||| |||||||||||||||| ||||||| Sbjct 428 CACCTGAGTTGGAGGAA-AGACGACTTCAACCGATAATTGTTGGTCAAGAAGCAATGCTC 486 Query 481 GATAACGCATGGAATCATCTAATGGAAGATGGAGTTGGTATTATGGGAT-TGTATGGTAT 539 || || || ||||| ||||| ||||||||||||||| |||||||||| | |||||||||| Sbjct 487 GAGAAAGCGTGGAAACATCTCATGGAAGATGGAGTTAGTATTATGGG-TATGTATGGTAT 545 Query 540 GGGAGGTGTTGGGAAGACGACTCTTCTCACCCAGATTAACAATAAGTTCAGTAA-GTATA 598 ||| ||||| |||||||| || ||| || | ||||| |||||||||||||||| | | Sbjct 546 GGGCGGTGTAGGGAAGACAACGCTTTTCTCACAGATCCACAATAAGTTCAGTAACG-A-C 603 Query 599 TG-TGTGGCTTTGACAGCGTGATTTGGGTTGTGGTGTCTAAAGAGGTGA-ATGTAGAGAA 656 | |||| |||||| |||||||||||||||||||||||||| || | |||| ||||| Sbjct 604 CGACGTGGATTTGACTTTGTGATTTGGGTTGTGGTGTCTAAAGA-GTTACATGTGGAGAA 662 Query 657 TATTCTAGATGAAATCGCTCAGAAAGTTCATATTAGTGGAGAGAAGTGGGA-CACAAAAT 715 |||| |||||||||||||||||||||| | || |||||||| ||||| | || |||| Sbjct 663 GATTCAAGATGAAATCGCTCAGAAAGTTGGTCTTGGTGGAGAGCAGTGGAACCA-AAAAG 721 Query 716 ATAAATACCAAAAGGGC-GTTTATTTATACAATTTCTTAAGGAAAATGAGATTTGTATTG 774 ||||| | || || ||| | | ||||| ||||||||||| ||||| |||||||| ||| Sbjct 722 ATAAAAATCAGAA-GGCTGATCGTTTATTCAATTTCTTAAAGAAAAAAAGATTTGTCTTG 780 Query 775 TTTTTGGATGACATATGGGAGAAGGT-TAATTTAGTTGAGATCGGAGTCCCCTTTCCAAC 833 ||||| |||||||||||||||||||| || ||| |||||||||||| || ||||| Sbjct 781 TTTTTAGATGACATATGGGAGAAGGTGGAA-TTAACTGAGATCGGAGTTCCGGATCCAA- 838 Query 834 AAT-A-AAAAACAAATGTAAAGTGGT-ATTCACCACTCGGTCCTTA-GATGTATGCACAA 889 || | ||||| ||||||| | || ||| || |||| || || | || ||||| | Sbjct 839 GATCACAAAAA-GGATGTAAA-TTGTCATTTACAACTC-GTTCTCAGGAAGTATGTGCGC 895 Query 890 GCATGGGGGTTGAAA-AACCAATGGAAGTCCAATGCCTGGCGGACAACGACGCATATGAT 948 ||||||||||| ||| | |||||||||||| ||||| || |||| |||| ||||| |||| Sbjct 896 GCATGGGGGTT-AAAGACCCAATGGAAGTCAAATGCTTGACGGAAAACGTCGCATTTGAT 954 Query 949 TTGTTCCaaaaaaaGGTTGGACAAATAACACTAGGA-AGCGACCCA-GAGATCCGTGAAC 1006 ||||||||| ||||||||||||| |||||||| || | || ||| || |||| || | Sbjct 955 TTGTTCCAAGAAAAGGTTGGACAGATAACACT-TGATTGTGATCCAGGA-ATCCCCGACC 1012 Query 1007 TTTCTAGAGTAGTTGCTAA-AAAATGTTGTGGTTTACCATTGGCGCTCAATGTGGTAAGT 1065 || | ||| | |||| || |||||||||||| |||||||||| ||||| || || || Sbjct 1013 TTGCAAGAACAATTGC-AAGAAAATGTTGTGGCCTACCATTGGCCCTCAACGTCATAGGT 1071 Query 1066 GAGACCATGTCATGCAAGAGGACGGTACAAGAATGGCGTCATGC-GATATATGTTTTAAA 1124 || || ||||| ||||||| ||| |||||||||||||||| || | || | ||||| || Sbjct 1072 GAAACAATGTCTTGCAAGAAGACAATACAAGAATGGCGTCACGCTG-TAGAAGTTTTCAA 1130 Query 1125 TTCATATGCTGCAAAGTTTTCTGGCATGGACGATAAGATCCTTCCGCTTTTAAAGTATAG 1184 |||||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct 1131 TTCATACGCTGCAGAGTTTGATGGCATGGACGATAAGATCCTTCCGCTTTTGAAGTATAG 1190 Query 1185 CTATGATAGTCTCAAAGGGGAGGATGTCAAAAT-GTGTTTGCTATATTGCGCTTTGTTTC 1243 ||| |||||||| || |||||| || || |||| ||||||||| ||||||||||| |||| Sbjct 1191 CTACGATAGTCTTAAGGGGGAGAATATC-AAATCGTGTTTGCTGTATTGCGCTTTATTTC 1249 Query 1244 CAGAAGATGCTA-AAATAAGGAAGGAGAATCTGATAGAGTACTGGATATGCGAGGAAATT 1302 |||||||| ||| | | | ||| ||||| ||||||||||||||||||||||||||||| Sbjct 1250 CAGAAGATACTAGTATTCTGAAAGAAGAAT-TGATAGAGTACTGGATATGCGAGGAAATT 1308 Query 1303 ATAGATGGAAGTGAAGGTATTGATAAGG-CTGAGAACCAAGG-TTATGAGATAATTGGTA 1360 |||||||||||||||||||| || |||| ||||| || |||| ||||||||| || |||| Sbjct 1309 ATAGATGGAAGTGAAGGTATAGA-AAGGGCTGAGGAC-AAGGGTTATGAGATTATCGGTA 1366 Query 1361 GTCTTGTTCG-TGCATCATTGTTGATGGAAGAGGTTGAATTGGAT-GGAGCAAA-TATTG 1417 |||||||||| | |||||||||||||||| | |||| ||| || | ||| |||| | ||| Sbjct 1367 GTCTTGTTCGCT-CATCATTGTTGATGGAGGGGGTT-AATAGGTTTGGA-CAAAGTTTTG 1423 Query 1418 TTTGTCTGCATGATGTTGTTCGTGAAATGGCTTTATGGATCGCATCTGATTTGGGAAAAC 1477 | | |||||||||||||||||||||||||||||||||| || ||||| ||||||||| Sbjct 1424 TCACTATGCATGATGTTGTTCGTGAAATGGCTTTATGGATTGCTTCTGAACTGGGAAAAC 1483 Query 1478 AAAATGAGGCGTTTATTGTGCGTGCAAGTGTTGGGCT-ACGTGAAATTCTAAAGGTTGAG 1536 |||| ||||| || |||||||||||| ||||||| || || |||||||| ||||||| || Sbjct 1484 AAAAAGAGGCCTTCATTGTGCGTGCAGGTGTTGG-CTTACCTGAAATTCCAAAGGTTAAG 1542 Query 1537 AATTGGAACG-TCGTGAGAAGGATGTCATTGATGAAGAATAATATT-GCTCATCTTGAT- 1593 |||||||| | | |||||||||||||| |||||| |||| || ||| | |||||| || Sbjct 1543 AATTGGAATGCT-GTGAGAAGGATGTCGTTGATGGAGAACAAGATTCG-TCATCTC-ATT 1599 Query 1594 GGCCGTCTTGATTGTATGGAACTCACAACTTTGCTACTACAAAGCACAC-ATTTGGAAAA 1652 ||| || |||| ||||||||||||||||||||||| || ||| | | | | ||| Sbjct 1600 GGCAGTTTTGAATGTATGGAACTCACAACTTTGCTCCTGGGAAGTGGATTAATAG-AAAT 1658 Query 1653 GATCTCGAGTGAATTCTTCAACTCCATGCCAAAGCTAGCTGTTTTGGATCTATCAGGCAA 1712 ||||||||||||||||||||| | |||||||||||||||||| ||||||||||| || Sbjct 1659 GATCTCGAGTGAATTCTTCAATTACATGCCAAAGCTAGCTGTCCTGGATCTATCACATAA 1718 Query 1713 TTATTAC-CTCTCTGAATTGCCA-AACGGAATATCAGAA-CTAGTTTCCTTGCAATATCT 1769 | | | |||| |||||||||| || ||||||||| || |||||||||||||||||||| Sbjct 1719 TGAA-AGGCTCTATGAATTGCCAGAA-GGAATATCA-AATCTAGTTTCCTTGCAATATCT 1775 Query 1770 CAACTTGTCAAGTA-CTGGTATACGTCATTTGCCTAAG--GG-TCTAC-AAGAGTTGAAG 1824 ||||||| | || |||||| ||| | |||||| ||| || ||| | || ||||||| Sbjct 1776 CAACTTGAGAT-TAACTGGTACACGCCGTTTGCCAAAGAAGGGTCTGCGAA-AGTTGAAA 1833 Query 1825 AAACTAATTCACTTGTACTTGGAGCGA-ACAAGTC-AG-CTTG-GAAGTATGGTTGGGAT 1880 ||||||||||||||| | |||||| | ||| || | |||| || |||| | |||||| Sbjct 1834 AAACTAATTCACTTGGATTTGGAGT-ATACA--TCGAATCTTGAGA-GTATTGCTGGGAT 1889 Query 1881 ATCATGCCT-TCATAATTTGAAAGTTTTGAAATTA--TC-TGGTTCTAG-TTATGC-ATG 1934 |||| | || | ||||||||||||||||||||||| | | |||| | || | | ||| Sbjct 1890 ATCAAGTCTGT-ATAATTTGAAAGTTTTGAAATTACGTAATAATTCTTGGTT-T-CTATG 1946 Query 1935 GGATCTCGACACAGTGAAGGAGTTGGAA-GCCTTGGAACACTTGGAAGTTTTAACCACAA 1993 |||||||||||||||||||||||||||| | |||||||| || ||| |||||||| ||| Sbjct 1947 GGATCTCGACACAGTGAAGGAGTTGGAAAGT-TTGGAACATTTAGAAATTTTAACCGCAA 2005 Query 1994 CTATCGATGACTGTACTCTAGGTACGGATCAATTCTTGAGCTCTCATAGGTTGATGAGTT 2053 ||||| || | | ||||| ||| | ||| ||||||||||||||||||||||||| Sbjct 2006 CTATCAAT--C---A----AGGTATGGAGCCATTTTTGAGCTCTCATAGGTTGATGAGTT 2056 Query 2054 G--CA---T-----ACGGTTTCT--AAAG-AT--ATCG--A---ATAA-TAGTAAT-AG- 2090 | || | ||| | ||| ||| || ||| | |||| || | || | Sbjct 2057 GTTCACGATTTCTTACGATCTCTGGAAAATATTTATCATCACCGATAAATATTCATCATC 2116 Query 2091 A-A-ATA--GG-AACTCATCTAGAATATCACTTCCAGTAACTATGGACAGGCTTCAAG-- 2143 | | || || || |||| | ||||||||||| ||| ||||||||||| |||| | | Sbjct 2117 ACAGATGTCGGGAA-TCATTTGGAATATCACTTTCAGGAACTATGGACAAGCTT-A-GCC 2173 Query 2144 AATTTACCATTGA-GCATTGCC-ATACCTCTGAGATAAAGATGGGAAGGATATGCAGCTT 2201 |||| | ||||| | | ||| | | ||||||||||||||||||||||||||||||||| Sbjct 2174 AATTCAGAATTGAAG-ACTGCGGA-ATCTCTGAGATAAAGATGGGAAGGATATGCAGCTT 2231 Query 2202 CTCCAGCCTCATCGAAGTGAATCTAAGCA-ATTGTAGACGCC-TGAGGGAATTGACATTT 2259 || ||||| |||||||| | ||| | ||||| || ||| ||||||||||||| ||| Sbjct 2232 CTTGAGCCTTGTCGAAGTGTTTATAAA-AGATTGT-GAAGCCCTGAGGGAATTGACGTTT 2289 Query 2260 CTGATGTTCGCTCCAAATCTTA-AACGGCTTCATGTTGTCTCTT-CAAATC-AACTAGAA 2316 |||||||| ||||||||||||| || ||| ||||| || |||| | |||||||| Sbjct 2290 CTGATGTTTGCTCCAAATCTTAGAAAA-CTTTATGTT-TCAGGGGCAAA-CGAACTAGAA 2346 Query 2317 GATATAATAAACAAAGAGAAAGCTCATGATGGTGAAAAAT--CAGGGATTGTTCCTTTCC 2374 |||||||||||||||||||||||| || ||| | |||| |||||||||||||||| | Sbjct 2347 GATATAATAAACAAAGAGAAAGCTTGCGA-GGT-ACAAATTTCAGGGATTGTTCCTTTTC 2404 Query 2375 CAAAGCTGAATGAACTTCACTT-ATATAATCTACGGGAG-CTGAAGAATATCTATTGGAG 2432 ||||||||| |||||| | || || | | ||| ||| | |||||||||||||||||||| Sbjct 2405 AAAAGCTGAAAGAACTT-ATTTTATTTCAGCTA-GGGTGGCTGAAGAATATCTATTGGAG 2462 Query 2433 TCCTCTACCATTTCCATGTCTAGAGAAAATCAATGTAATGGGCTGTCCAAATCTGAAAAA 2492 ||||||||| |||||||||||| ||| |||| |||| | |||| |||||||| ||| Sbjct 2463 TCCTCTACCCTTTCCATGTCTACAGACTGTCAAAGTAAAAAGATGTCAAAATCTGAGAAA 2522 Query 2493 GCTTCCACTCGATTCTAAAAGTGGAAAGCATGGTGGA-AATGGACTCATCATAACACACC 2551 |||||||||| |||| |||||||| ||||| |||| | ||||||||| |||||||| || Sbjct 2523 GCTTCCACTCAATTCCAAAAGTGGCAAGCAGGGTG-ATAATGGACTCGTCATAACATAC- 2580 Query 2552 G-TGAGATG-GAATGGATT 2568 | ||||| | || |||||| Sbjct 2581 GATGAGACGAGA-TGGATT 2598 > Ahg907240 jgi|Araly1|907240|Al_scaffold_0002_321 Length=3522 Score = 1288 bits (697), Expect = 0.0 Identities = 1307/1591 (82%), Gaps = 84/1591 (5%) Strand=Plus/Plus Query 456 AATTGTTGGTCAAGAAACAATGCTTGATAACGCATGGAATCATCTAATGGAAGATGGAGT 515 ||||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||| Sbjct 1080 AATTGTTGGTCAAGAGACAATGCTAGATAACGCATGGAAACATCTGATTGAAGATGGAGC 1139 Query 516 TGGTATTATGGGAT-TGTATGGTATGGGAGGTGTTGGGAAGACGACTCTTCTCACCCAGA 574 |||||||||||| | |||| |||||||| || || |||||||| ||| |||||||||||| Sbjct 1140 TGGTATTATGGG-TATGTACGGTATGGGCGGAGTAGGGAAGACAACTATTCTCACCCAGA 1198 Query 575 TTAACAATAAGTTCAGTAAGT-ATATGTGTGGCTTTGACAGCGTGATTTGGGTTGTGGTG 633 | || |||||||||||||| | ||| |||||| |||||| |||||||||||||||||| Sbjct 1199 TCAATAATAAGTTCAGTAA-TGATAGGTGTGGATTTGACTTTGTGATTTGGGTTGTGGTG 1257 Query 634 TCTAAAGAGGTGAATGTAGAGAATATTCTAGATGAAATCGCTCAGAAAGTTCATATTAGT 693 ||||||||| || || |||||||||||| ||||||||| ||| |||||||| | || || Sbjct 1258 TCTAAAGAGCTGCATATAGAGAATATTCAAGATGAAATTGCTGAGAAAGTTGGTCTTGGT 1317 Query 694 GGAG-AGAAGTGGGACACAAAATATAAATAC-CAAAAGGGCGTTTATTTATACAATTTCT 751 |||| || ||||| ||| |||| || || || ||||||||| || ||||||||||||||| Sbjct 1318 GGAGAAG-AGTGGAACAAAAAAGATGAA-ACTCAAAAGGGCCTTCATTTATACAATTTCT 1375 Query 752 TAAGGA-AAATGAGATTTGTATTGTTTTTGGATGACATATGGGAGAAGGT-TAATTTAGT 809 |||||| ||| |||||| | |||||||| ||||| |||||||||| ||| || |||| Sbjct 1376 TAAGGACAAA-GAGATTCATGTTGTTTTTAGATGATATATGGGAGACGGTGGAA-TTAGA 1433 Query 810 TGAGATCGGAGTCCCCTTTCCAACAAT-A-AAAAACAAATGTAAAGTGGTATTCACCACT 867 | |||| ||| |||| |||||| || | | ||| ||| | | ||| |||||||||| Sbjct 1434 TAAGATTGGAATCCCGGATCCAAC-ATCACACAAA-GGATGCAGATTGGCATTCACCACT 1491 Query 868 CGGTCCT-TAGATGTATGCACAAGCATGGGGGTTGAAAAACCAATGGAAGTCCAATGCCT 926 |||| || || |||||||||| ||||||||||||| ||||||||||||||||||||| | Sbjct 1492 CGGT-CTCTAAATGTATGCACGAGCATGGGGGTTGGAAAACCAATGGAAGTCCAATGTTT 1550 Query 927 GGCGGACAACGACGCATATGATTTGTTCCaaaaaaaGGTTGGACAAATAACACTAGGAAG 986 ||||||| | ||||||| |||||||||| |||||||||||||| || ||||||| | ||| Sbjct 1551 GGCGGACGATGACGCATTTGATTTGTTCAAAAAAAAGGTTGGAGAATTAACACTCGAAAG 1610 Query 987 CGACCCAGAGATCCGTGAACTTTCTAGAGTAGTTGCTAAAAAATGTTGTGGTTTACCATT 1046 ||| ||| |||||| || ||| | | | ||||||||||||||||||||||||||||||| Sbjct 1611 CGATCCACAGATCCCAGACCTTGCAAAAATAGTTGCTAAAAAATGTTGTGGTTTACCATT 1670 Query 1047 GGCGCTCAATGTGGTAAGTGAGACCATGTCATGCAAGAGGACGGTACAAGAATGGCGTCA 1106 ||| ||||| || || |||| |||||||||| |||||||||| ||||||||||||| | Sbjct 1671 GGCTCTCAACGTAATAGGTGAAACCATGTCATCCAAGAGGACGATACAAGAATGGCGACG 1730 Query 1107 TGCGATAT-ATGTTTTAAATTCATATGCTGCAAAGTTTTCTGGCATGGACGATAAGATCC 1165 |||||||| | ||||| | ||||||||| ||| ||||||| |||||| | |||||||||| Sbjct 1731 TGCGATATCA-GTTTTGACTTCATATGCCGCAGAGTTTTCAGGCATGAATGATAAGATCC 1789 Query 1166 TTCCGCTTTTAAAGTATAGCTATGATAGTCTCAAAGGGGAGGATGTCAAAATGTGTTTGC 1225 |||||||||| ||||||||||| |||||||| |||||||| |||||||| | ||||||| Sbjct 1790 TTCCGCTTTTGAAGTATAGCTACGATAGTCTTAAAGGGGACCATGTCAAATTTTGTTTGC 1849 Query 1226 TATATTGCGCTTTGTTTCCAGAAGATGCTAAAATAAGGA-AGGAGAATCTGATAGAGTAC 1284 |||| |||||||| | ||| |||||||||||||| | || ||| | ||||||| ||| Sbjct 1850 TATACTGCGCTTTATATCCGGAAGATGCTAAAATTCCCATAGAAGATT-TGATAGACTAC 1908 Query 1285 TGGATATGCGA-GGAAATTATAGATGGAAGTGAAGGTATTGATA-AGGCTGAGAACCAAG 1342 ||||||||||| |||| |||||||| || ||||| || ||| || |||||||| | | | Sbjct 1909 TGGATATGCGAAGGAA-TTATAGATAGAGGTGAAAGTGTTG-TAGAGGCTGAGTAT-ATG 1965 Query 1343 -GTTATGAGATAATTGGTAGTCTTGT-TCGTGCATCATTGTTGATGGAAGAGG-TTGAAT 1399 ||||||||||||||||||||||||| | ||||||||||||||||| ||| || |||| | Sbjct 1966 AGTTATGAGATAATTGGTAGTCTTGTGT-GTGCATCATTGTTGATG-AAGGGGGTTGA-T 2022 Query 1400 T-GGATGGAGCAA-ATATTGTTTGTCTGCATGATGTTG-TTCGTGAAATGGCTTTATGGA 1456 ||||||| || || |||| ||| ||||||| || | ||||||||||||| || |||| Sbjct 2023 CAGGATGGAA-AAGATTTTGTGTGTATGCATGACGT-GATTCGTGAAATGGCCTTGTGGA 2080 Query 1457 TCGCATCTGATTTGGGAAAACAAAATGAGGCGTTTATTGTGCGTGCAAGTGTTGGGCTAC 1516 |||||||||||||||||| | |||| || | ||||||||||||||| |||||||||||| Sbjct 2081 TCGCATCTGATTTGGGAAGAGAAAAGGATGTTTTTATTGTGCGTGCAGGTGTTGGGCTAC 2140 Query 1517 GTGAAATTCTAAAGGTT-GAGAATTGGAACGTCGTGAGAA-GGATGTCATTGATGAA--- 1571 ||||||||| || |||| | || ||||||| | || |||| |||||||||||||||| Sbjct 2141 GTGAAATTCCAAGGGTTAGGGA-TTGGAACATTGT-AGAAAGGATGTCATTGATGAAACT 2198 Query 1572 GA--A-TAATATT-GCT--CATCTTGA-TGGC-CGTCTTGATTGTATGGAACTCACAACT 1623 || | ||| | | | ||| || | |||| | || ||| |||||| ||||||||||| Sbjct 2199 GAGGAATAACAAGAGGTTTCATGTT-ACTGGCAC-TCCTGAATGTATGAAACTCACAACT 2256 Query 1624 TTGCTACTACAAAGCACAC-A-TTTGGAAAAG-ATCTCGAGTGAATTCTTCAACTCCATG 1680 ||||| || ||| || | | ||||| || | |||||||||||||||||||| | |||| Sbjct 2257 TTGCTCCTGCAA--CATTCGAATTTGGGAA-GTATCTCGAGTGAATTCTTCAAGTACATG 2313 Query 1681 CCAAAGCTAGCTGTTTTGGATCTATCAGGCAATTATTACC-TCTCTG--AATTGCCAAAC 1737 ||||| || ||||| ||||||||||| | ||| || || ||| || ||||||| Sbjct 2314 CCAAATCTTGCTGTGTTGGATCTATC-G--AATAATGACAGTCTTTGTGAATTGCC---- 2366 Query 1738 GGAA-TATCAGAACTAGTTTCCTTGCAATATCTCAACTTGTCAAGTACTGGTATACGTC- 1795 ||| |||||| | |||||||| ||||||||||||||||||||| |||| | |||| || Sbjct 2367 GGATCTATCAGGATTAGTTTCCCTGCAATATCTCAACTTGTCAAATACTAGCATAC-TCC 2425 Query 1796 ATTTGCCTAAGGGTCTACAAGAGTTGAAGAAACTAATTCACTTGTACTTGGAGCGAACAA 1855 | |||||||||||| ||||| ||||||||||||||||| ||||| | |||||| |||| Sbjct 2426 AATTGCCTAAGGGTGTACAAAAGTTGAAGAAACTAATTTACTTGGATTTGGAGAAAACAT 2485 Query 1856 --GTCAGCTTGGAAGTA-TGGTTGGGATATCATGCCTTCATAATTTGAAAGTTTTGAAAT 1912 || | |||| ||| | | ||||||||| | || |||||||||||||||||||| | Sbjct 2486 TTGTTAT-TTGGG-GTAGTACT-GGGATATCAAGTCTGCATAATTTGAAAGTTTTGAAGT 2542 Query 1913 TATCTGGTTCT-AGTTATGCATGGGATCTCGACA-CAGTGAAGGAGTTGGAAGCCTTGGA 1970 ||| ||||||| | || | || ||| | | ||| |||||||||| |||||||||||||| Sbjct 2543 TATTTGGTTCTCATTTTT--ATTGGAACACCACATCAGTGAAGGAATTGGAAGCCTTGGA 2600 Query 1971 ACACTTGGAAGTTTTAACCACAACTATCGAT 2001 ||| |||||||||||||||| ||| || ||| Sbjct 2601 ACATTTGGAAGTTTTAACCATAACAATTGAT 2631 Score = 324 bits (175), Expect = 2e-87 Identities = 384/481 (80%), Gaps = 30/481 (6%) Strand=Plus/Plus Query 2023 CAATTCTTGAGCTCTCATAGGTTGATGAGTTGCATACGGTTTCTAAAG-ATATCGAATAA 2081 ||||| || | ||| ||||||||||||||||| | || |||| ||| || ||||||| Sbjct 2728 CAATTTTTAACCTCACATAGGTTGATGAGTTGTACACAAATTCT-AAGAATCTCGAATAC 2786 Query 2082 TAGTAATAGAAATAGGAACTCATCTAGAATATCACTTCCAGTAACTATGGACAGGCTTCA 2141 | | | | | |||| |||||| ||||||||||||||| ||||||||||| ||||| Sbjct 2787 CA-T--CA-ATCT-GGAA-TCATCTGGAATATCACTTCCAGCAACTATGGACAAGCTTCG 2840 Query 2142 AGAA-TTTACCA--TTGAGCA-TTGCCATACCTCTGAGATAAAGATGGGAAGGATATGCA 2197 ||| | || || || || | |||| ||| ||||||||||||||||||||||||||||| Sbjct 2841 TGAACTCTA-CATTTTTAGGAGTTGCAATATCTCTGAGATAAAGATGGGAAGGATATGCA 2899 Query 2198 GCTTCTCCAGCCTCATCGAAGTGAATCTA-AGC-A-ATTGTAGACGCCTGAGGGAATTGA 2254 |||||| |||||| || ||||| | || | | | |||||| | ||||||||||||||| Sbjct 2900 GCTTCTTGAGCCTCGTCAAAGTG-CT-TATA-CAAGATTGTAAAGGCCTGAGGGAATTGA 2956 Query 2255 CATTTCTGATGTTCGCTCCAAATCTTAAACGGCT-TCATGTTGTCTCTT-CAAATCAACT 2312 ||||||||||||||||||||||||||||| | | |||||| | | |||| | || Sbjct 2957 CATTTCTGATGTTCGCTCCAAATCTTAAATTTTTGT-ATGTTGA-TGATGCAAAAGACCT 3014 Query 2313 AGAAGATATAATAAACAAAGAGAAAGCTCATGATGGTGAAAAATCAGGGATTGTTCCTTT 2372 |||||||||||||||||||||||||||| ||| | ||||| | ||| ||||||||||| Sbjct 3015 AGAAGATATAATAAACAAAGAGAAAGCTTGTGAAGTTGAAAT-T-AGG-ATTGTTCCTTT 3071 Query 2373 CCCAAAGCTGAATGAA-CTTCACTTATATAATCTACGGGAGCTGAAGAATATCTATTGGA 2431 | |||||||| | || ||||| || | |||||| | ||||| ||||||| || |||| Sbjct 3072 TCAAAAGCTGACT-AATCTTCATTTGGAGCATCTACCGAAGCTGGAGAATATATACTGGA 3130 Query 2432 GTCCTCTA-CCATTTCCATGTCTAGAGAAAATCAATGTAATGGGCTGTCCAAATCTGAAA 2490 |||||||| || |||||||||||| |||||||| ||||| | | |||||||| |||||| Sbjct 3131 GTCCTCTATCC-TTTCCATGTCTAAAGAAAATCGATGTATTCGAATGTCCAAACCTGAAA 3189 Query 2491 A 2491 | Sbjct 3190 A 3190 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 101739044395 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5