BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G63650.1
Length=2115
Score E
Sequences producing significant alignments: (Bits) Value
Ahg474990 jgi|Araly1|474990|fgenesh2_kg.2__120__AT1G63650.2 3061 0.0
Ahg493847 jgi|Araly1|493847|fgenesh2_kg.7__3280__AT5G41315.1 556 2e-157
> Ahg474990 jgi|Araly1|474990|fgenesh2_kg.2__120__AT1G63650.2
Length=2003
Score = 3061 bits (1657), Expect = 0.0
Identities = 1845/1937 (95%), Gaps = 8/1937 (0%)
Strand=Plus/Plus
Query 148 GAAGAAACAATGGCAACCGGAGAAAACAGAACGGTGCCGGACAATCTAAAGAAACAGCTC 207
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 72 GAAGAAACAATGGCAACCGGAGAAAACAGAACGGTGCCGGAAAATCTAAAGAAACAGCTC 131
Query 208 GCAGTTTCAGTTCGAAACATTCAATGGAGTTATGGAATCTTCTGGTCTGTCTCTGCTTCT 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 GCAGTTTCAGTTCGAAACATTCAATGGAGTTATGGAATCTTCTGGTCTGTCTCTGCTTCT 191
Query 268 CAACCAGGAGTGTTGGAGTGGGGAGATGGATATTACAATGGAGACATAAAGACAAGGAAG 327
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 192 CAACCAGGAGTGTTGGAGTGGGGAGATGGATATTACAATGGAGACATTAAGACAAGGAAG 251
Query 328 ACGATTCAAGCAGCAGAAGTCAAAATTGACCAGTTAGGTCTTGAGAGAAGTGAGCAGCTT 387
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 252 ACGATTCAAGCAGCAGAAGTCAAAGTTGACCAGTTAGGTCTTGAGAGAAGTGAGCAGCTT 311
Query 388 AGAGAGCTTTATGAATCTCTCTCCCTCGCTGAATCCTCAGCTTCCGGTAGCTCTCAGGTC 447
|||||||||||||| |||||||||||||||||||| ||| |||||||| |||||||||||
Sbjct 312 AGAGAGCTTTATGATTCTCTCTCCCTCGCTGAATCTTCAACTTCCGGTGGCTCTCAGGTC 371
Query 448 ACTAGACGAGCTTCCGCCGCCGCTCTCTCACCGGAGGACCTCACCGACACCGAGTGGTAC 507
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 372 ACTAGACGAGCTTCCGCCGCCGCTCTCTCACCGGAAGACCTCACCGACACCGAGTGGTAC 431
Query 508 TACTTAGTATGCATGTCTTTCGTCTTCAACATCGGTGAAGGAATCCCCGGAGGAGCGTTA 567
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct 432 TACTTAGTATGCATGTCTTTCGTCTTCAACATTGGTGAAGGAATCCCAGGAGGAGCATTA 491
Query 568 TCCAATGGAGAACCAATATGGCTTTGTAACGCTGAAACCGCCGATAGCAAAGTCTTCACT 627
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 492 TCCAACGGAGAACCAATATGGCTTTGTAACGCAGAAACCGCCGATAGCAAAGTCTTCACT 551
Query 628 CGTTCTCTTCTAGCTAAAAGTGCTTCGCTTCAGACAGTGGTTTGCTTCCCGTTTCTTGGA 687
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 552 CGTTCTCTTCTAGCTAAAAGTGCTTCGCTTCAAACAGTGGTTTGCTTCCCGTTTCTTGGA 611
Query 688 GGAGTCCTTGAGATTGGCACGACCGAACATATTAAAGAGGACATGAACGTGATACAAAGT 747
|||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| |
Sbjct 612 GGAGTCCTTGAGATCGGCACAACCGAACATATTAAAGAGGACTTGAACGTGATACAATGC 671
Query 748 GTTAAGACGTTGTTCCTTGAAGCTCCTCCATATACTACAATATCGACAAGATCAGACTAT 807
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 672 GTGAAGACGTTGTTCCTTGAAGCTCCTCCTTATACTACAATATCGACAAGATCAGACTAT 731
Query 808 CAAGAAATTTTTGATCCCTTAAGTGACGATAAATACACTCCGGTGTTTATAACCGAAGCT 867
||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct 732 CAAGAAATTTTTGATCCTTTAAGCGACGATAAATACACTCCGGTGTTTAGAACGGAAGCT 791
Query 868 TTTCCAACAACTTCTACTAGCGGGTTTGAGCAAGAACCTGAGGATCATGATTCGTTCATC 927
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 792 TTTCCGACAACTTCTACTAGCGGGTTTGAGCAAGAACCAGAGGATCATGATTCGTTCATC 851
Query 928 AACGATGGTGGTGCGTCTCAGGTACAAAGCTGGCAGTTTGTGGGTGAAGAAATCAGTAAC 987
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 852 AACGATGGTGGTGCGTCTCAGGTACAAAGCTGGCAGTTTGTTGGTGAAGAACTCAGTAAC 911
Query 988 TGCATTCACCAATCGTTAAATTCAAGCGATTGCGTTTCCCAAACGTTTGTTGGAACAACC 1047
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 912 TGCATTCACCAATCGTTAAACTCTAGCGATTGCGTTTCCCAAACGTTTGTTGGAACAACT 971
Query 1048 GGGAGACTTGCTTGCGATCCAAGGAAGAGTAGGATTCAACGGTTAGGTCAGATTCAAGAA 1107
||| || ||||||||||| |||||||||||||| |||||||||||||||||||||| |||
Sbjct 972 GGGCGAGTTGCTTGCGATACAAGGAAGAGTAGGGTTCAACGGTTAGGTCAGATTCAGGAA 1031
Query 1108 CAGAGTAACCATGTAAATATGGACGACGATGTTCATTACCAAGGCGTGATATCGACGATT 1167
||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||
Sbjct 1032 CAGAGTAACCATGTAAACATGGACGATGATGTTCATTACCAAGGGGTGATCTCGACGATT 1091
Query 1168 TTCAAAACAACGCATCAGCTAATACTCGGACCGCAGTTTCAGAACTTCGATAAGCGGTCT 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1092 TTCAAAACAACGCATCAGCTAATACTCGGACCGCAGTTTCAGAACTTCGATAAGCGGTCT 1151
Query 1228 AGCTTCACAAGGTGGAAGCGATCATCATCTGTGAAAACATTGGGAGAGAAATCGCAGAAG 1287
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1152 AGCTTCACAAGGTGGAAGCGATCATCATCCGTGAAAACGTTGGGAGAGAAATCGCAGAAG 1211
Query 1288 ATGATAAAGAAGATACTCTTCGAGGTTCCTTTGATGAACAAGAAAGAAGAGTTGTTACCG 1347
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 1212 ATGATAAAGAAGATACTCTTCGAAGTTCCTCTGATGAACAAGAAAGAAGAGTTGTTACCG 1271
Query 1348 GACACACCAGAGGAAACCGGGAACCATGCCTTGTCCGAGAAGAAACGCCGCGAGAAATTG 1407
||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct 1272 GACACACCAGAGGAAACCGGGAACCATGCGTTGTCCGAGAAGAAACGCCGTGAAAAATTG 1331
Query 1408 AATGAACGGTTTATGACATTGAGATCAATCATTCCCTCAATTAGTAAGATTGATAAAGTG 1467
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 AATGAACGGTTCATGACATTGAGATCAATCATTCCCTCAATTAGTAAGATTGATAAAGTG 1391
Query 1468 TCGATTCTTGATGATACAATTGAGTATCTTCAAGAT-TTACAGAAACGGGTTCAAGAGTT 1526
||||||||||||||||||||||||||||||||||| || || ||| |||||||||| ||
Sbjct 1392 TCGATTCTTGATGATACAATTGAGTATCTTCAAGAACTT-CAAAAAAGGGTTCAAGAATT 1450
Query 1527 GGAATCTTGTAGAGAATCTGCTGATACAGAGACACGGATAACGATGATGAAGAGGAAGAA 1586
||||| ||||||||||||||| ||||||||||| || || |||| |||||||||||||||
Sbjct 1451 GGAATATTGTAGAGAATCTGCGGATACAGAGACGCGAATGACGACGATGAAGAGGAAGAA 1510
Query 1587 ACCGGATGATGAGGAGGAAAGAGCATCAGCGAATTGTATGAACAGCAAAAGGAAGGGGAG 1646
|||||| |||||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1511 ACCGGAGGATGAGGAAGAAAGAGCATCGGCGAATTGTATGAACAGCAAGAGGAAGGGGAG 1570
Query 1647 TGATGTGAATGTAGGAGAAGATGAACC-AGCTGATATCGGTTATGCTGGTCTAACGGATA 1705
||||||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||
Sbjct 1571 TGATGTGAATGTAGGAGAAGATGAACCGAA-TGATACCGGTTATGCTGGTCTAACCGATA 1629
Query 1706 ACTTAAGGATCAGTTCATTAGGTAACGAGGTGGTTATTGAGCTTAGATGCGCTTGGAGAG 1765
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1630 ACTTAAGGATCAGTTCATTAGGTAACGAGGTGGTTATTGAGCTTAGATGTGCTTGGAGAG 1689
Query 1766 AAGGGATATTGCTTGAGATAATGGATGTGATTAGTGATCTCAACTTGGATTCTCACTCGG 1825
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1690 AAGGGATATTACTTGAGATAATGGATGTGATTAGTGATCTTAACTTGGATTCTCACTCAG 1749
Query 1826 TTCAGTCGTCAACCGGAGACGGTTTACTCTGCTTAACTGTCAATTGCAAGCATAAAGGGA 1885
| || |||||||| |||||||||||||||||| |||| || || ||||||||||||||||
Sbjct 1750 TACAATCGTCAACTGGAGACGGTTTACTCTGCGTAACCGTTAACTGCAAGCATAAAGGGA 1809
Query 1886 CAAAAATAGCAACAACAGGAATGATCCAAGAGGCACTTCAAAGGGTTGCATGGATATGTT 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 CAAAAATAGCAACAACAGGAATGATCCAAGAGGCACTTCAAAGGGTTGCATGGATATGTT 1869
Query 1946 AAGGAT-TCAAGGTTTAGATTTGACAAAATTAGCTTTTTCTCTGGTTTGGTTTCCCAATT 2004
||| | ||| |||||||||| |||||||||||||||||||| |||||||||| ||||||
Sbjct 1870 GAGG-TCTCACGGTTTAGATT-GACAAAATTAGCTTTTTCTCCGGTTTGGTTTTCCAATT 1927
Query 2005 TTCGGTAATCAGTGATTCTAACCGAGTTTTTGTGATTTTGAAGTTTTGGAAGATCCTTAA 2064
||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 1928 TTCGGTACTCAGTGATTCTAACCGAGTTTT-GTGATTTTGAAGTTTTGGAAGATCCTTTA 1986
Query 2065 GAATTCTTGAAAAATCG 2081
||||||||| |||||||
Sbjct 1987 GAATTCTTGTAAAATCG 2003
> Ahg493847 jgi|Araly1|493847|fgenesh2_kg.7__3280__AT5G41315.1
Length=1929
Score = 556 bits (301), Expect = 2e-157
Identities = 845/1093 (77%), Gaps = 96/1093 (9%)
Strand=Plus/Plus
Query 933 TGGTGGTGCGTCTCAGGTACAAAGCTGGCAGTTTGTGGGTGAAGAAATCAGTAACTGCAT 992
||| || || |||||||| |||||||||||| | ||| || || | ||||||||| |
Sbjct 845 TGGGGGAGCTTCTCAGGTGCAAAGCTGGCAGCTCATGGACGACGAGCTTAGTAACTGCGT 904
Query 993 TCACCAATCG-TTAAATTCAAGCGATTGCGTTTCCCAAACGTTTGTTGGAA-CAAC--CG 1048
|||||| ||| || ||||| ||||||||||| || |||||||||||| ||| | |
Sbjct 905 TCACCAGTCGCTT-AATTCCAGCGATTGCGTCTCTCAAACGTTTGTT-GAAGGGGCGGCT 962
Query 1049 GGA-GACTTGCTTGCGATCCAAGGAAGAGTAGGATTCAACGGTTAGGTCAGATTCAAGA- 1106
||| | || ||| || | |||| ||||||||| ||||| || |||| || ||||||||
Sbjct 963 GGACGGGTTTCTTACGGTGCAAGAAAGAGTAGGGTTCAAAGGCTAGGGCAAATTCAAGAG 1022
Query 1107 -A-C--AG--A-GT--A-ACCATGT-A---AAT---ATGGACGACGATGTTCATTACCAA 1149
| | || | || | || ||| | || | ||||||| ||||||||||||
Sbjct 1023 CAGCAAAGAAATGTGAAGACGTTGTCATTTGATCCAAAAAACGACGACGTTCATTACCAA 1082
Query 1150 GGCGTGATATCGACGATTTTCAA-AACAACGCATCAGCTAATACTCGGACCGCAGTTTCA 1208
| ||||| || |||||||| || | ||| |||||| |||| ||||||||||||||||
Sbjct 1083 AGTGTGATCTCCACGATTTTTAAGACCAA-TCATCAGTTAATTCTCGGACCGCAGTTTC- 1140
Query 1209 G-AACTTCGATAAGCGGTCTAGCTTCACAAGGTGGAAGCGATCA--T-CATC-T-GT--- 1259
| |||| |||||||| ||| |||||||| ||||||||| |||| | |||| | |
Sbjct 1141 GAAACTGCGATAAGCAGTCAAGCTTCACGAGGTGGAAGAAATCATCTCCATCATCATCAG 1200
Query 1260 GAA--AACATTGG-GAGAG-A-AATCGC-AGAAGATGATAAAGAAGA-TACTCTTCGAGG 1312
||| || || | | ||| | || | ||| ||||||| | || | |||||||
Sbjct 1201 GAACCGCCA-CGGTCTCTGCACCATCACAAGGA-ATGTTAAAGAAAATTA-TTTTCGAGG 1257
Query 1313 TTCCTTTGA-TGAACAAGAAAGAAG-AG-T--TGTT--ACCGGA-CACA--CCAGAG--G 1360
|||| || || || |||||| || || | |||| | | | || | |||||| |
Sbjct 1258 TTCC-GCGAGTGCACCAGAAAG-AGAAGTTAATGTTGGA-CTCACCAGAGGCCAGAGATG 1314
Query 1361 AAACCGGGAACCATGC-CTTGTCCGAGAAGAAACGCCGCGAGAAATTGAATGAACGGTTT 1419
||||||||||||| || || | ||||||||||| || ||||||||||| ||||||||
Sbjct 1315 AAACCGGGAACCACGCGGTT-TTAGAGAAGAAACGGCGTGAGAAATTGAACGAACGGTTC 1373
Query 1420 ATGA-CATTGAGATCAATCATTCCCTCAATTAGTAAGATTGATAAAGTGTCGATTCTTGA 1478
| || | ||||||||||||||||| ||||| | ||||| || ||||| |||||||||||
Sbjct 1374 ACGATC-TTGAGATCAATCATTCCGTCAATCAACAAGATCGACAAAGTATCGATTCTTGA 1432
Query 1479 TGATACAATTGAGTATCTTCAAGATTTAC-AGAAACGGGTTCAAGAGTTGGAATCTTGTA 1537
||||| || |||||||||||||| | | ||| |||||||| ||| | |||||||| |
Sbjct 1433 CGATACGATAGAGTATCTTCAAGAACT-CGAGAGACGGGTTCTAGAACTAGAATCTTGCA 1491
Query 1538 GAGAATCTGCTGATACAGAGACAC---GGATAACGATGATGAAGAGGAAGAAACCGGAT- 1593
||||||| |||||||||| || | ||| | || |||||||||||||||||| ||
Sbjct 1492 GAGAATCAACTGATACAGAAACCCGTGGGACGATGACGATGAAGAGGAAGAAACC--ATG 1549
Query 1594 -GATG-AGGAGGAAAGAGCATCAGCGAATTGTATGAAC-A-GCAAA-AGG-AA-GGG--G 1644
|||| |||| |||||| ||||||| ||||| | ||| | | ||| || || ||| |
Sbjct 1550 CGATGCAGGA-GAAAGAACATCAGCTAATTGCACAAACAATG-AAACCGGAAATGGGAAG 1607
Query 1645 -A-G--T--GATGTGAATGTAGGAGAAGATGAACCAGCTGATATC-GGTTATGCTGGTCT 1697
| | | | | ||||| || |||| || ||||| |||| | |||| | | ||| |
Sbjct 1608 AAGGTTTCGGTTAACAATGTTGGTGAAGCCGAGCCAGCAGATA-CTGGTTTTACCGGTTT 1666
Query 1698 AACGGATAACTTAAGGATCAGTTCATTAGGTAACGAGGTGGTTATTGAGCTTAGATGCGC 1757
||| ||||| ||||||||| |||| || ||||| ||||||||||||||||||||||| ||
Sbjct 1667 AACCGATAATTTAAGGATCGGTTCGTTTGGTAATGAGGTGGTTATTGAGCTTAGATGTGC 1726
Query 1758 TTGGAGAGAAGGGA-TATTGCTTGAGATAATGGATGTGATTAGTGATCTCAACTTGGATT 1816
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1727 TTGGAGAGAA-GGAGTATTGCTTGAGATAATGGATGTGATTAGTGATCTCAACTTGGATT 1785
Query 1817 CTCACTCGGTTCAGTCGTCAACCGGAGACGGTTTACTCTGCTTAACTGTCAATTGCAAGC 1876
|||| |||||||| || || |||||||||||||| ||||||||||| |||||||||||||
Sbjct 1786 CTCATTCGGTTCAATCCTCTACCGGAGACGGTTTGCTCTGCTTAACCGTCAATTGCAAGC 1845
Query 1877 ATAAAGGGACAAAAATAGCAACAACAGGAATGATCCAAGAGGCACTTCAAAGGGTTGCAT 1936
| || ||| |||||||||| ||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1846 ACAAGGGGTCAAAAATAGCGACACCAGGAATGATCAAAGAGGCACTTCAAAGGGTTGCAT 1905
Query 1937 GGATATGTT-AAG 1948
|||| |||| |||
Sbjct 1906 GGATCTGTTGAAG 1918
Score = 536 bits (290), Expect = 2e-151
Identities = 529/641 (83%), Gaps = 30/641 (5%)
Strand=Plus/Plus
Query 155 CAATGGCAACCGGAGAAAACAG---AACGGTGCCGGACAATCTAAAGAAACAGCTCGCAG 211
||||||| |||||| ||||||| ||| |||| || ||||| |||||||| |||||||
Sbjct 1 CAATGGCTACCGGACAAAACAGAACAACTTTGCCAGAGAATCTGAAGAAACACCTCGCAG 60
Query 212 TTTCAGTTCGAAACATTCAATGGAGTTATGGAATCTTCTGGTCTGTCTCTGCTTCTCAAC 271
||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct 61 TTTCAGTTCGAAACATTCAATGGAGTTATGGTATCTTTTGGTCTATCTCTGCTTCTCAGT 120
Query 272 CAGGAGTGTTGGAGTGGGGAGATGGATATTACAATGGAGACAT-AAAGACAAGGAAGACG 330
| ||||| || || ||||||||||||||||| |||||||| || ||| || |||||||||
Sbjct 121 CTGGAGTATTAGAATGGGGAGATGGATATTATAATGGAGATATCAAA-ACGAGGAAGACG 179
Query 331 ATTCAAGCAGCAGAAG-TCAAAATTGACCAG-TTAGGTCT-TGAGAGAAGTGAGCAGCTT 387
|||||||| | | || ||||| ||| ||| || ||||| | ||| || ||||| |||
Sbjct 180 ATTCAAGCTTC-GGAGATCAAAGCTGATCAGCTT-GGTCTACG-GAGGAGCGAGCAACTT 236
Query 388 AGAGAGCTTTATGAATCTCTCTCCCTCGCTGAATCCTCAGCTTCC-G-GTAG----C--- 438
|| |||||||| || ||||||||| |||||||||| || | ||| | | || |
Sbjct 237 AGCGAGCTTTACGAGTCTCTCTCCATCGCTGAATCTTCTTCCTCCGGCGCAGCCAACGGA 296
Query 439 TCTCAGGTCACTAGACGAGCTTCCGCCGCCGCTCTCTCACCGGAGGACCTCA-CCGACAC 497
||||| ||||| |||||||||||||||||||| || |||||||| || || | |||||||
Sbjct 297 TCTCAAGTCACCAGACGAGCTTCCGCCGCCGCACTTTCACCGGAAGATCT-AGCCGACAC 355
Query 498 CGAGTGGTACTACTTAGTATGCATGTCTTTCGTCTTCAACATCGGTGAAGGAATCCCCGG 557
||||||||||||||| || || |||||||||||||||||||| ||||||||||| || ||
Sbjct 356 CGAGTGGTACTACTTGGTTTGTATGTCTTTCGTCTTCAACATTGGTGAAGGAATGCCTGG 415
Query 558 -AGGAGCGTTAT-CCAATGGAGAACCAATATGGCTT-TGTAACGCTGAAACCGCCGATAG 614
||| |||| | | || || ||||| |||||| || || |||||| | || || |||||
Sbjct 416 CCGGA-CGTT-TGCGAACGGTGAACCGATATGG-TTGTGCAACGCTCATACGGCGGATAG 472
Query 615 CAAAGTCTTCA-CTCGTTCTCTTCTAGCTAAAAGTGCTTCGCTTCAGACAGTGGTTTGCT 673
||||| || | | || ||||||||||| |||||||||||| || |||||||||||||||
Sbjct 473 TAAAGTTTTTAGC-CGCTCTCTTCTAGCAAAAAGTGCTTCGGTTAAGACAGTGGTTTGCT 531
Query 674 TCCCGTTTCTTGGAGGAGTCCTTGAGATTGGCACGACCGAACATATTAAAGAGGACATGA 733
|||||||||||||||||||| |||||||||| || ||||||||||||| ||| |||||||
Sbjct 532 TCCCGTTTCTTGGAGGAGTCGTTGAGATTGGTACCACCGAACATATTACAGAAGACATGA 591
Query 734 ACGTGATACAAAGTGTTAAGACGTTGTTCCTTGAAGCTCCT 774
|||| |||||| | || ||||| | ||||| ||||| |||
Sbjct 592 ACGTAATACAATGCGTGAAGACATCATTCCTCGAAGCCCCT 632
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79570521805
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5