BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G64490.1 Length=581 Score E Sequences producing significant alignments: (Bits) Value Ahg474898 jgi|Araly1|474898|fgenesh2_kg.2__28__AT1G64490.1 63.9 1e-09 > Ahg474898 jgi|Araly1|474898|fgenesh2_kg.2__28__AT1G64490.1 Length=498 Score = 63.9 bits (34), Expect = 1e-09 Identities = 36/37 (97%), Gaps = 0/37 (0%) Strand=Plus/Plus Query 476 ATGTCTTTAGTTGAAATTAGTGTTTTAGCCATTGATA 512 ||||| ||||||||||||||||||||||||||||||| Sbjct 407 ATGTCATTAGTTGAAATTAGTGTTTTAGCCATTGATA 443 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21252663073 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5