BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G65150.1
Length=1312
Score E
Sequences producing significant alignments: (Bits) Value
Ahg475528 jgi|Araly1|475528|fgenesh2_kg.2__658__AT1G65150.2 1308 0.0
Ahg925398 jgi|Araly1|925398|scaffold_200959.1 1171 0.0
Ahg925396 jgi|Araly1|925396|scaffold_200957.1 1029 0.0
Ahg925399 jgi|Araly1|925399|scaffold_200960.1 994 0.0
Ahg338626 jgi|Araly1|338626|fgenesh1_pg.C_scaffold_2000725 839 0.0
Ahg894754 jgi|Araly1|894754|Al_scaffold_0006_2750 833 0.0
> Ahg475528 jgi|Araly1|475528|fgenesh2_kg.2__658__AT1G65150.2
Length=1006
Score = 1308 bits (708), Expect = 0.0
Identities = 916/1015 (90%), Gaps = 20/1015 (2%)
Strand=Plus/Plus
Query 96 ATGGGTTCAAATGCGTCAGATC-CTGCAG-TGTTGAAGACTTGGAGAAGGAATCCTCCTT 153
|||||||||||||| ||||| | |||| | ||||||||| |||||||| |||| ||||||
Sbjct 1 ATGGGTTCAAATGCATCAGA-CTCTGC-GATGTTGAAGAGTTGGAGAAAGAATGCTCCTT 58
Query 154 C--C-TCTACTCTTGTCAGACTTTCTCAGCTTGCTAACGAGAAATACGAGTCCCCTCCTT 210
| | ||| ||||||||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 59 CTTCTTCTTCTCTTGTCAGACTCTCTCAGCTTGCTAACGACAAATACGAATCCCCTCCTT 118
Query 211 TCTCTTCTGGTGCACACAACTGGAGATTGGTTGTTCACCCAAAAGGAAACGAAGCGGACA 270
||||||| |||| |||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 119 TCTCTTCCGGTGGACACAACTGGAGATTGGTTGTTTACCCAAAAGGAAACGAAGAGGACA 178
Query 271 ATGGAAGTGGG-TTTGTGTCTATGTATGTGGAATGCCTCTCATCGACAACACCACCCATT 329
|||||| |||| ||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct 179 ATGGAA-TGGGTTTTGTTTCAATGTATGTGGAATGTCTCTCATCGACAACACCACCCATT 237
Query 330 GATGTGTTTGCCTATCTCACTTTCTTTGTCTTCAGCGAGGAAGAGAAGAAGTACCTCTCT 389
||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 238 GATGTGTTTGCTTATCTCACTTTCTTTATCTTTAGCGAGGAAGAGAAGAAGTACCTCTCT 297
Query 390 TTTCAAGATGTTGAAGTGAAGCGTTTCAATTCTTCAAAAACGGTTTGGGGATTGTCAAAA 449
|||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| ||
Sbjct 298 ATTCAAGATGTTGAAGTTAAGAGGTTCAATTCTTCAAAAACGGTTTGGGGATTGTCACAA 357
Query 450 GCTCTTCCGGTTGAAACACTCAAAGACCGTGCAAAGGGATTTATCTTGTACGGTGAAGAA 509
|||||| || ||||| ||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 358 GCTCTTTCGATTGAAGCACTCAAAGACCGTGCAAAGGGATTTATCTTGTACGGAGAACTA 417
Query 510 CATGAGTTCGGTGCTCATGTGAAGATTGTTTCACGACCCGCCTCTTTTGGTGAAGATCTC 569
|||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 418 CATGAGTTTGGAGCTCATGTGAAGATTGTTTCACGACCCGACTCCTTTGGTGAAGATCTC 477
Query 570 CCTTTTCACAAATTCTCTTGGACTATTCGTGATTTCGCTCTTCTG-GAACAGAATGATTA 628
||||| |||||||||||||||||||||||||||||| | ||||| || ||||||||||
Sbjct 478 CCTTTCCACAAATTCTCTTGGACTATTCGTGATTTCTCCCTTCTCAGA-CAGAATGATTG 536
Query 629 CGTATCCAAAACCTTTCACATGGGAGAAAAGGATTGGACTCTAAAGTTGTATCCAAAGGG 688
||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 537 CGTTTCGAAAACCTTTCACATGGGAGAAAAGGATTGGACTCTAACTTTGTATCCAAAGGG 596
Query 689 GGACTCTGAGGCAGATGACAAGTTAATTC-AGCATTTGCATTTAGCTGACGGTGAAACTT 747
|||||||||||||||| | ||||| | | |||||||||||||||||||||||||| ||
Sbjct 597 AGACTCTGAGGCAGATGGCGAGTTA-TCCCAGCATTTGCATTTAGCTGACGGTGAAGTTT 655
Query 748 TAGCCAAGGGTGAGCTGATTTTCGTGCGAGTAAACCTGAAGGTTCTAGACCCGCGTGGAT 807
|| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 656 TATTGAAGGGTGAGCTGGTTTTCGTGCGAGTAAACCTGCAGGTTCTAGACCCGCGTGGAT 715
Query 808 CCAATCACCTAACAGGAAGC-CTTAACTGTTGGCTCATGAACTCGAACAAAGCG-TGGGG 865
| ||||||||| |||| | || || ||||| |||||||||||| ||||||| ||||
Sbjct 716 CTGATCACCTAAAAGGATGGACTAAAG-GTTGGATCATGAACTCGACCAAAGCGATGGG- 773
Query 866 TCTTCCTCAATCCATGTCTTTCGATAAAAATGAGGGGGCTTACTTGGATCGTGAAGGGAC 925
||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||| ||
Sbjct 774 TCTTCCTCAATCCATGTCTTTAGATAAAATTCAGGGGGCTTACTTGGACCGTGAAGGTAC 833
Query 926 TTTGGAGGTAGAGATTGAATGTGAAATTAAAAACTCCCAT-AAAAACCATCCCTTCTTTT 984
||||||||||||||| ||||||||| || |||||||| || |||||||||||||||||||
Sbjct 834 TTTGGAGGTAGAGATCGAATGTGAACTTGAAAACTCC-ATCAAAAACCATCCCTTCTTTT 892
Query 985 AGGATATCAACCATGTCAGGTCTACTACTCTAGAGTCTGGGACTACTCTGTTTTAAGCGT 1044
|||||||| |||||| || ||||||||||||||||||| |||||||||||||| |||||
Sbjct 893 AGGATATCTACCATGCCATGTCTACTACTCTAGAGTCTATGACTACTCTGTTTTTAGCGT 952
Query 1045 AAAAACTGAATGTGAAGTTAACGCTCTATCTATGTTTAGGATATCTATGTATCTA 1099
|||| ||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct 953 AAAAT-TGAATGTGAAGTTAACGCTCTATCTATTTTTAAGATATCTATGTATCTA 1006
Score = 65.8 bits (35), Expect = 8e-10
Identities = 50/56 (89%), Gaps = 6/56 (11%)
Strand=Plus/Plus
Query 1154 ATATCTACCATGCCATGTCTACTACTCTATGA--CT-T-ACCTACTCTGTTTTTAG 1205
||||||||||||||||||||||||||||| || || | || ||||||||||||||
Sbjct 896 ATATCTACCATGCCATGTCTACTACTCTA-GAGTCTATGAC-TACTCTGTTTTTAG 949
Score = 63.9 bits (34), Expect = 3e-09
Identities = 49/55 (89%), Gaps = 6/55 (11%)
Strand=Plus/Plus
Query 1094 TATCTACCATGCCATGTCTACTACTCTATGA--CT-T-ACCTACTCTGTTTTTAG 1144
|||||||||||||||||||||||||||| || || | || ||||||||||||||
Sbjct 897 TATCTACCATGCCATGTCTACTACTCTA-GAGTCTATGAC-TACTCTGTTTTTAG 949
> Ahg925398 jgi|Araly1|925398|scaffold_200959.1
Length=934
Score = 1171 bits (634), Expect = 0.0
Identities = 837/934 (90%), Gaps = 17/934 (2%)
Strand=Plus/Plus
Query 83 TTGTGTAGAGAAAATGGGTTCAAATGCGTCAGATCCTGCAG-TGTTGAAGACTTGGAGAA 141
|||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||
Sbjct 8 TTGTGTAGAGAAAATGGGTTCAAATGTATCAGATCCTGC-GATGTTGAAGAGTTGGAGAA 66
Query 142 GGAATCCTCCT--T-CCTCTACTCTTGTCAGACTTTCTCAGCTTGCTAACGAGAAATACG 198
|| ||||||| | | ||| ||||||||||||||||||||||||| ||||| |||||||
Sbjct 67 AGACTCCTCCTCCTGCTTCTTCTCTTGTCAGACTTTCTCAGCTTGCCAACGATAAATACG 126
Query 199 AGTCCCCTCCTTTC-TCTTCTGGTGCACACAACTGGAGATTGGTTGTTCACCCAAAAGGA 257
|||||||||||||| || || |||| |||||||||||||||||||||| |||| ||||||
Sbjct 127 AGTCCCCTCCTTTCGTC-TCCGGTGGACACAACTGGAGATTGGTTGTTTACCCGAAAGGA 185
Query 258 AACGAAGCGGACAATGGAAGTGGGTTTGTGTCTATGTATGTGGAATGCCTCTCATCGACA 317
||||||| ||||||||||||||| ||||| || |||||||||||||| |||||||| |||
Sbjct 186 AACGAAGAGGACAATGGAAGTGGATTTGTTTCAATGTATGTGGAATGTCTCTCATCCACA 245
Query 318 ACACCACCCATTGATGTGTTTGCCTATCTCACTTTCTTTGTCTTCAGCGAGGAAGAGAAG 377
||||||||||||||||||||| | ||||| |||||||||||||| |||||||||||||||
Sbjct 246 ACACCACCCATTGATGTGTTTACTTATCTTACTTTCTTTGTCTTTAGCGAGGAAGAGAAG 305
Query 378 AAGTACCTCTCTTTTCAAGATGTTGAAGTGAAGCGTTTCAATTCTTCAAAAACGGTTTGG 437
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 306 AAGTACCTCTCTATTCAAGATGTGGAAGTGAAGCGTTTCAATTCTTCAAAAACGGTTTGG 365
Query 438 GGATTGTCAAAAGCTCTTCCGGTTGAAACACTCAAAGACCGTGCAAAGGGATTTATCTTG 497
|||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||
Sbjct 366 GGATTGTCAAAAGCTCTTTCGATTGAAACACTCAAAGACCGTGCAAAGGGCTTTATCTTG 425
Query 498 TACGGTGAAGAACATGAGTTCGGTGCTCATGTGAAGATTGTTTCACGACCCGCCTCTTTT 557
||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 426 TACGGAGAACTACATGAGTTTGGTGCTCATGTGAAGATTGTTTCACGACCCGACTCTTTT 485
Query 558 GGTGAAGATCTCCCTTTTCACAAATTCTCTTGGACTATTCGTGATTTCGCTCTTCTG-GA 616
||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||
Sbjct 486 GGTGAAGATCTCCCTTTTCACAAATTCTCATGGACTATTCGTGATTTCTCCCTTCTTAGA 545
Query 617 ACAGAATGATTACGTATCCAAAACCTTTCACATGGGAGAAAAGGATTGGACTCTAAAGTT 676
|||||||||| || || ||||||||||||||||||||||| ||||||||||||| ||
Sbjct 546 -CAGAATGATTGTGTTTCGAAAACCTTTCACATGGGAGAAAAAGATTGGACTCTAACTTT 604
Query 677 GTATCCAAAGGGGGACTCT-GAGGCAGATGACAAGTTAATTC-AGCATTTGCATTTAGCT 734
|| ||||||||| |||||| ||| |||||| | ||||| | | |||||||||||||| ||
Sbjct 605 GTTTCCAAAGGGAGACTCTAGAG-CAGATGGCGAGTTA-TCCCAGCATTTGCATTTAACT 662
Query 735 GACGGTGAAACTTTAGCCAAGGGTGAGCTGATTTTCGTGCGAGTAAACCTGAAGGTTCTA 794
||| ||| |||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 663 GACAATGATACTTTATTGAAGGGTGAGCTGATTTTCGTGCGAGTAAACCTCAAGGTTCTC 722
Query 795 GACCCGCGTGGATCCAATCACCTAACAGGAAGCCTTAACTGTTGGCTCATGAACTCGAAC 854
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 723 GACCCGCGTGGATCCAATCACCTAACAGGAAGCCTTCACAGTTGGCTCATGAACTCGAAC 782
Query 855 AAAGCGTGGGGTCTT-CCTCAATCCATGTCTTTCGATAAAAATGAGGGGGCTTACTTGGA 913
||||| ||||| || || ||||||||||| ||||||| | ||||||||||||||||
Sbjct 783 AAAGCAAGGGGTAAGACC-CAGTCCATGTCTTTAGATAAAATTCAGGGGGCTTACTTGGA 841
Query 914 TCGTGAAGGGACTTTGGAGGTAGAGATTGAATGTGAAATTAAAAACTCCCAT-AAAAACC 972
|||||||| ||||||||||| ||||| ||||||||| || |||||| || |||||||
Sbjct 842 CCGTGAAGGTACTTTGGAGGTGGAGATCGAATGTGAAGTTGTTAACTCC-ATCAAAAACC 900
Query 973 ATCCCTTCTTTTAGGATATCAACCATGTCAGGTC 1006
|||||||||||||||||||| |||||| || |||
Sbjct 901 ATCCCTTCTTTTAGGATATCTACCATGCCATGTC 934
> Ahg925396 jgi|Araly1|925396|scaffold_200957.1
Length=934
Score = 1029 bits (557), Expect = 0.0
Identities = 809/927 (87%), Gaps = 31/927 (3%)
Strand=Plus/Plus
Query 83 TTGTGTAGAGAAAATGGGTTCAAATGCGTCAGATCCTGCAG-TGT-TGAAGACTTGGAGA 140
|||||||||||||||||||||| ||| ||||||||||| | | | |||||| |||||||
Sbjct 8 TTGTGTAGAGAAAATGGGTTCATGTGCATCAGATCCTGC-GAT-TCTGAAGAGTTGGAGA 65
Query 141 AGGA---ATCCTCCTTCCTCTACTCTTGTCAGACTTTCTCAGCTTGCTAACGAGAAATAC 197
| || ||||||||| ||| ||||||||||| |||||||| ||||||||| ||||||
Sbjct 66 AAGACTCCTCCTCCTTCTTCTTCTCTTGTCAGAATTTCTCAGAATGCTAACGACAAATAC 125
Query 198 GAGTCCCCTCCTTTCTCTTCTGGTGCACACAACTGGAGATTGGTTGTTCACCCAAAAGGA 257
|| ||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||
Sbjct 126 GAATCCCCTCCTTTCTCTTCCGGTGGACACAACTGGAGATTGGTTGTTTACCCAAAAGGA 185
Query 258 AACGAAGCGGACAATGGAAGTGGG-TTTGTGTCTATGTATGTGGAATGCCTCTCATCGAC 316
|| |||| |||||||||||| ||| ||||| || |||||||||||||| |||||||||||
Sbjct 186 AATGAAGAGGACAATGGAAG-GGGCTTTGTTTCAATGTATGTGGAATGTCTCTCATCGAC 244
Query 317 AACACCACCCATTGATGTGTTTGCCT-ATCTCACTTTCTTTGTCTTCAGCGAGGAAGAGA 375
||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||
Sbjct 245 AACACCACCCATTGATGTGTTTG-CTCATCTCACTTTCTTTGTCTTTAGCGAGGAAGAGA 303
Query 376 AGAAGTACCTCTCTTTTCAAGATGTTGAAGTGAAGCGTTTCAATTCTTCAAAAACGGTTT 435
|||||||||||||| |||||||||||||||| || |||||||||||||| ||||||||||
Sbjct 304 AGAAGTACCTCTCTATTCAAGATGTTGAAGTTAAACGTTTCAATTCTTCTAAAACGGTTT 363
Query 436 GGGGATTGTCAAAAGCTCTTC-CGGTTGAAACACTCAAAGACCGTGCAAAGGGATTTATC 494
||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 364 GGGGATTGTCACAAGCTC-TCTCGGTTGAAACACTCAAAGACCGTGCAAAGGGATTTATC 422
Query 495 TTGTACGGTGAAGAACATGAGTTCGGTGCTCATGTGAAGATTGTTTCACGACCCG-CCTC 553
|||||||| |||||||||||||| ||||||||||||||||| | ||||| ||||| || |
Sbjct 423 TTGTACGGAGAAGAACATGAGTTTGGTGCTCATGTGAAGATGGCTTCACCACCCGTCC-C 481
Query 554 TTTTGGT--GAAGATCTCCCTTTTCACAAATTCTCTTGGA-CTATTCGTGATTTCGCTCT 610
| ||| | ||| |||||||||||||||||||||||||| | |||||||||||| ||
Sbjct 482 TGTTGATTTGAA--TCTCCCTTTTCACAAATTCTCTTGGAGC-ATTCGTGATTTCTCTGG 538
Query 611 TCTGGAACAGAATGATTACGTATCCAAAACCTTTCACATGGGAGAAAAGGATTGGACTCT 670
|||| |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 539 TCTGAAACAGAATGATTGCGTTTCCAAAACCTTTCACATGGGAGAAAAGAATTGGACTCT 598
Query 671 AAAGTTGTATCCAAAGGGGGACTCTGAGGCAGATGACAAGTTA-ATTCAGCATTTGCATT 729
|| |||||||||||||| ||||||||| |||||| | ||||| | ||| |||||| ||
Sbjct 599 AACCTTGTATCCAAAGGGAGACTCTGAGACAGATGGCCAGTTACAC-CAGAATTTGCTTT 657
Query 730 TAGCTGACGGTGAAACTTTAGCCAAGGGTGAGCTGATTTTCGTGCGAGTA-AACCTGAAG 788
|||||||||||||||||||| | ||||||| ||||||| ||||||||| ||| || |
Sbjct 658 TAGCTGACGGTGAAACTTTAATGAGGGGTGAGATGATTTTTGTGCGAGTACAAC-TGCGG 716
Query 789 GTTCTAGACCCGCGTGGATCCAATCACCTAACAGGAAGCC-TTAACTGTTGGCTCATGAA 847
||||| ||||||| |||||||||||||||||||| || || ||||||||||| |||||
Sbjct 717 GTTCTTGACCCGCATGGATCCAATCACCTAACAG-AATCCCTTAACTGTTGGGTCATGGC 775
Query 848 CTCGAACAAAGCGTGGGGTCTTCCTCAATCCATGTCTT-TCGATAAAAATGAGGGGGCTT 906
||||| || ||||| |||||||||||||||||| ||| | | | ||| | ||| |||||
Sbjct 776 CTCGACCAGAGCGTATGGTCTTCCTCAATCCATGCCTTGT-GCTGAAATTCAGGAGGCTT 834
Query 907 ACTTGGATCGTGAAGGGACTTTGGAGGTAGAGATTGAATGTGAAATTAAAAACTCCCAT- 965
||||||| ||||||| || ||| |||||||||| ||||||||| || || || ||
Sbjct 835 ACTTGGACCGTGAAGATACGTTGAAGGTAGAGATCGAATGTGAAGTTGTTAAGGCC-ATC 893
Query 966 AAAAACCATCCCTTCTTTTAGGATATC 992
|||||| ||||||||||||||||||||
Sbjct 894 AAAAACAATCCCTTCTTTTAGGATATC 920
> Ahg925399 jgi|Araly1|925399|scaffold_200960.1
Length=931
Score = 994 bits (538), Expect = 0.0
Identities = 703/782 (90%), Gaps = 14/782 (2%)
Strand=Plus/Plus
Query 232 GGAGATTGGTTGTTCACCCAAAAGGAAACGAAGCGGACAATGGAAGTGGG-TTTGTGTCT 290
|||||||||||||| ||||||||||||| |||| |||||||||||| ||| ||||| ||
Sbjct 157 GGAGATTGGTTGTTTACCCAAAAGGAAATGAAGAGGACAATGGAAG-GGGCTTTGTTTCA 215
Query 291 ATGTATGTGGAATGCCTCTCATCGACAACACCACCCATTGATGTGTTTGCCTATCTCACT 350
|||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct 216 ATGTATGTGGAATGTCTCTCATCCACAACACCACCCATTGACGTGTTTGCTTATCTCACT 275
Query 351 TTCTTTGTCTTCAGCGAGGAAGAGAAGAAGTACCTCTCTTTTCAAGATGTTGAAGTGAAG 410
||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 276 TTCTTTGTCTTTAGCGAGGAAGAGAAGAAGTACCTCTCTATTCAAGATGTTGAAGTAAAG 335
Query 411 CGTTTCAATTCTTCAAAAACGGTTTGGGGATTGTCAAAAGCTCTTCCGGTTGAAACACTC 470
||||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||
Sbjct 336 CGTTTCAATACTTCTAAAACGGTTTGGGGATTGTCAAAAGCTCTTTCGATTGAAACACTC 395
Query 471 AAAGACCGTGCAAAGGGATTTATCTTGTACGGTGAAGAACATGAGTTCGGTGCTCATGTG 530
|||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||||||
Sbjct 396 AAAGACTGTGCAAAGGGATTTATCTTGTACGGAGAACTACATGAGTTTGGTGCTCATGTG 455
Query 531 AAGATTGTTTCACGACCCGCCTCTTTTGGTGAAGATCTCCCTTTTCACAAATTCTCTTGG 590
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||
Sbjct 456 AAGATTGTTTCACGACCCGTCTCTTTTGGTGAAGATCTCCCTTTCCACAAATTCTCATGG 515
Query 591 ACTATTCGTGATTTCGCTCTTCTGGA-ACAGAATGATTACGTATCCAAAACCTTTCACAT 649
||||||||||||||| | ||||| | ||||||||||| ||| || ||||||||||||||
Sbjct 516 ACTATTCGTGATTTCTCCCTTCT-CAGACAGAATGATTGCGTTTCGAAAACCTTTCACAT 574
Query 650 GGGAGAAAAGGATTGGACTCTAAAGTTGTATCCAAAGGGGGACTCT-GAGGCAGATGACA 708
||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||| |
Sbjct 575 GGGAGAAAAGGATTGGACTCTAACTTTGTATCCAAAGGGGGACTCTAGAG-CAGATGGCG 633
Query 709 AGTTAATTC-AGCATTTGCATTTAGCTGACGGTGAAACTTTAGCCAAGGGTGAGCTGATT 767
||||| | | |||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 634 AGTTA-TCCCAGCATTTGCATTTAGCCGACGGTGAAACTTTATTCAAGGGTGAGCTGATT 692
Query 768 TTCGTGCGAGTAAACCTGAAGGTTCTAGACCCGCGTGGATCCAATCACCTAACAGGAAGC 827
||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 693 TTCGTTCGAGTAAACCTGCAGGTTCTAGACCCGCGTGGATCCGATCACCTAACAGGAAGC 752
Query 828 CTTAACTGTTGGCTCATGAACTCGAACAAAGCG-TGGGGTCTTCCTCAATCCATGTCTTT 886
||||| ||||| ||||| ||||| ||||||| || | ||||||||||| |||| ||||
Sbjct 753 ATTAACGGTTGGGTCATGGCCTCGACCAAAGCGATGTG-TCTTCCTCAATTCATGCCTTT 811
Query 887 CGATAAAAATGAGGGGGCTTACTTGGATCGTGAAGGGACTTTGGAGGTAGAGATTGAATG 946
| ||||| | ||||| |||||||||| |||||||| ||||||||||||||||| |||||
Sbjct 812 AGCTAAAATTCAGGGGTCTTACTTGGACCGTGAAGGTACTTTGGAGGTAGAGATCGAATG 871
Query 947 TGAAATTAAAAACTCCCAT-AAAAACCATCCCT-TCTTTTAGGATATCAACCATGTCAGG 1004
|||| || |||||| || ||||||||||||| | |||||||||||| |||||| || |
Sbjct 872 TGAAGTTGTTAACTCC-ATCAAAAACCATCCCTGT-TTTTAGGATATCTACCATGCCATG 929
Query 1005 TC 1006
||
Sbjct 930 TC 931
> Ahg338626 jgi|Araly1|338626|fgenesh1_pg.C_scaffold_2000725
Length=738
Score = 839 bits (454), Expect = 0.0
Identities = 586/649 (90%), Gaps = 12/649 (2%)
Strand=Plus/Plus
Query 344 TCTCACTTTCTTTGTCTTCAGCGAGGAAGAGAAGAAGTACCTCTCTTTTCAAGATGTTGA 403
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct 96 TCTCACTTTCTTTGTCTTTAGCGAGGAAGAGAAGAAGTACCTCTCTATTCAAGATGTTGA 155
Query 404 AGTGAAGCGTTTCAATTCTTCAAAAACGGTTTGGGGATTGTCAAAAGCTCTTCCGGTTGA 463
||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||
Sbjct 156 AGTAAAGCGTTTCAATTCTTCAAAAACGGTTTGGGGATTGTCACAAGCTCTTTCGATTGA 215
Query 464 AACACTCAAAGACCGTGCAAAGGGATTTATCTTGTACGGTGAAGAACATGAGTTCGGTGC 523
| ||||||||||||||||||||||||||||||||||||| ||| ||||||||| || ||
Sbjct 216 AGCACTCAAAGACCGTGCAAAGGGATTTATCTTGTACGGAGAACTACATGAGTTTGGAGC 275
Query 524 TCATGTGAAGATTGTTTCACGACCCGCCTCTTTTGGTGAAGATCTCCCTTTTCACAAATT 583
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 276 TCATGTGAAGATTGTTTCACGACCCGACTCCTTTGGTGAAGATCTCCCTTTTCACAAATT 335
Query 584 CTCTTGGACTATTCGTGATTTCGCTCTTCTGGA-ACAGAATGATTACGTATCCAAAACCT 642
|||||||||||||||||||||| ||||||| | ||||||||||| ||| || |||||||
Sbjct 336 CTCTTGGACTATTCGTGATTTCTCTCTTCT-CAGACAGAATGATTGCGTTTCGAAAACCT 394
Query 643 TTCACATGGGAGAAAAGGATTGGACTCTAAAGTTGTATCCAAAGGGGGACTCTGAG-GCA 701
|||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||
Sbjct 395 TTCACATGGGAGAAAAGGATTGGACTCTAACTTTGTATCCAAAGGGGGACTCT-AGAGCA 453
Query 702 GATGACAAGTTAAT-TCAGCATTTGCATTTAGCTGACGGTGAAACTTTAGCCAAGGGTGA 760
|||| | |||| || ||||||||||||||| ||||| ||| |||||| ||||||||
Sbjct 454 GATGGCGAGTT-ATCCCAGCATTTGCATTTAACTGACAATGATACTTTATTGAAGGGTGA 512
Query 761 GCTGATTTTCGTGCGAGTAAACCTGAAGGTTCTAGACCCGCGTGGATCCAATCACCTAAC 820
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 513 GCTGATTTTCGTGCGAGTAAACCTGAAGGTTCTAGACCCGCGTGGATCCAATCACCTATC 572
Query 821 AGGAAGCCTTAACTGTTGGCTCATGAACTCGAACAAAGCGTGGGGTCTT-CCTCAATCCA 879
|| | | ||||| |||||||| ||||||||||||||||||||||| || |||||||
Sbjct 573 AGTATGGCTTAAAAGTTGGCTCTTGAACTCGAACAAAGCGTGGGGTAAGACC-CAATCCA 631
Query 880 TGTCTTTCGATAAAAATGAGGGGGCTTACTTGGATCGTGAAGGGACTTTGGAGGTAGAGA 939
||||||| ||||||| | |||||||||||||||| |||||||| ||||||||||||||||
Sbjct 632 TGTCTTTAGATAAAATTCAGGGGGCTTACTTGGACCGTGAAGGTACTTTGGAGGTAGAGA 691
Query 940 TTGAATGTGAAATTAAAAACTCCCAT-AAAAACCATCCCT-TCTTTTAG 986
| ||||||||| || |||||| || ||||||||||||| | ||||||
Sbjct 692 TCGAATGTGAAGTTGTTAACTCC-ATCAAAAACCATCCCTGT-TTTTAG 738
> Ahg894754 jgi|Araly1|894754|Al_scaffold_0006_2750
Length=639
Score = 833 bits (451), Expect = 0.0
Identities = 581/643 (90%), Gaps = 11/643 (2%)
Strand=Plus/Plus
Query 271 ATGGAAGTGGG-TTTGTGTCTATGTATGTGGAATGCCTCTCATCGACAACACCACCCATT 329
||||||| ||| ||||| || |||||||||||||| |||||||| |||||||||| ||||
Sbjct 1 ATGGAAGGGGGCTTTGTTTCAATGTATGTGGAATGTCTCTCATCCACAACACCACTCATT 60
Query 330 GATGTGTTTGCCT-ATCTCACTTTCTTTGTCTTCAGCGAGGAAGAGAAGAAGTACCTCTC 388
|| ||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 61 GACGTGTTTG-CTCATCTCACTTTCTTTGTCTTTAGCGAGGAAGAGAAGAAGTACCTCTC 119
Query 389 TTTTCAAGATGTTGAAGTGAAGCGTTTCAATTCTTCAAAAACGGTTTGGGGATTGTCAAA 448
| |||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||
Sbjct 120 TATTCAAGATGTTGAAGTAAAGCGTTTCAATTCTGCTAAAACGGTTTGGGGATTGTCAAA 179
Query 449 AGCTCTTCCGGTTGAAACACTCAAAGACCGTGCAAAGGGATTTATCTTGTACGGTGAAGA 508
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 180 AGCTCTTTCGGTTGAAACACTCAAAGACCGTGCAAAGGGATTTATCTTGTACGGAGAACT 239
Query 509 ACATGAGTTCGGTGCTCATGTGAAGATTGTTTCACGACCCGCCTCTTTTGGTGAAGATCT 568
||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 240 ACATGAGTTTGGTGCTCATGTGAAGATTGTTTCACGACCTGTCTCTTTTGGTGAAGATCT 299
Query 569 CCCTTTTCACAAATTCTCTTGGACTATTCGTGATTTCGCTCTTCTG-GAACAGAATGATT 627
|||||||||||||||||| ||||||||| |||||||| ||||||| || ||||||||||
Sbjct 300 CCCTTTTCACAAATTCTCATGGACTATTTGTGATTTCTCTCTTCTCAGA-CAGAATGATT 358
Query 628 ACGTATCCAAAACCTTTCACATGGGAGAAAAGGATTGGACTCTAAAGTTGTATCCAAAGG 687
||| || ||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 359 GCGTTTCGAAAACCTTTCACATGGGAGAAAAGGATTGGACTCTGACTTTGTATCCAAAGG 418
Query 688 GGGACTCT-GAGGCAGATGACAAGTTAATTC-AGCATTTGCATTTAGCTGACGGTGAAAC 745
|||||||| ||| |||||| ||||||| | | |||||||||||||||| |||||||||||
Sbjct 419 GGGACTCTAGAG-CAGATGGCAAGTTA-TCCCAGCATTTGCATTTAGCCGACGGTGAAAC 476
Query 746 TTTAGCCAAGGGTGAGCTGATTTTCGTGCGAGTAAACCTGAAGGTTCTAGACCCGCGTGG 805
|||| || |||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 477 TTTATTCAGGGGTGAGCTGATTTTCGTTCGAGTAAACCTGCAGGTTCTAGACCCGCGTGG 536
Query 806 ATCCAATCACCTAACAGGAAGCCTTAACTGTTGGCTCATGAACTCGAACAAAGCG-TGGG 864
|||| ||||||||| ||||||| ||||| ||||| ||||| ||||| ||||||| ||||
Sbjct 537 ATCCGATCACCTAATAGGAAGCATTAACGGTTGGGTCATGGCCTCGACCAAAGCGATGGG 596
Query 865 GTCTTCCTCAATCCATGTCTTTCGATAAAAATGAGGGGGCTTA 907
||||||||||| |||| |||| | ||||| | ||||||||||
Sbjct 597 -TCTTCCTCAATTCATGCCTTTAGCTAAAATTCAGGGGGCTTA 638
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49064194179
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5