BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G66970.2
Length=2663
Score E
Sequences producing significant alignments: (Bits) Value
Ahg475792 jgi|Araly1|475792|fgenesh2_kg.2__922__AT1G66970.1 2529 0.0
Ahg475793 jgi|Araly1|475793|fgenesh2_kg.2__923__AT1G66980.1 2318 0.0
Ahg492137 jgi|Araly1|492137|fgenesh2_kg.7__1570__AT4G26690.1 2058 0.0
Ahg925930 jgi|Araly1|925930|scaffold_201491.1 115 2e-24
> Ahg475792 jgi|Araly1|475792|fgenesh2_kg.2__922__AT1G66970.1
Length=2237
Score = 2529 bits (1369), Expect = 0.0
Identities = 1798/2001 (90%), Gaps = 45/2001 (2%)
Strand=Plus/Plus
Query 321 ATGCTCCACTGGTGATTGCTCGTGGTGGGTTCTCTGGATTGTATCCAGATTCGAGTATCG 380
|||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| | |
Sbjct 255 ATGCTCCACTTGTGATTGCTCGTGGTGGGTTTTCTGGATTATTTCCAGATTCGAGTCTAG 314
Query 381 CTGCTTATCAACTTGCAA-CCCTGACAAGTGTAGCCGATGTTGTTCTATGGTGTGAT-TT 438
|||| || ||| |||||| | | ||||||||||| | |||||||||||||||||| ||
Sbjct 315 CTGCATACCAATTTGCAATGCAAG-CAAGTGTAGCCCAAGTTGTTCTATGGTGTGATGTT 373
Query 439 GCAGCTAACAAAAGATG-GGCTTGGGATTTGCTTCCCTGATTTAAATCTGGCCAATGCTT 497
|||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 374 -CAGCTAACTAAAGATGAAG-TTGGGATTTGCTTCCCTGATTTAAATCTGGCCAATGCTT 431
Query 498 CAACTATTGATCG-TGTTTACCCAAATCGT-GAAAAATCTTACTC-TGTTAATGGAGTCA 554
||| ||| | | ||||||| ||| |||| | |||||||||| | |||||||||||||
Sbjct 432 CAAATATACA-AGATGTTTACTCAACTCGTCG-AAAATCTTAC-CGGGTTAATGGAGTCA 488
Query 555 CTACTAAGGGTTGGTTCCCCAATGATTTCTCCTTGACAGAGCTCCAGAAT-TTTTTATTG 613
||||| ||||||||||||||| |||||||||||||||||||||||||||| ||| | ||
Sbjct 489 CTACTCAGGGTTGGTTCCCCATTGATTTCTCCTTGACAGAGCTCCAGAATGTTTCT-TTA 547
Query 614 ATCCGAGGAATACTTTCACGAACCGATAGATTCGATGGAAATGGATAT-CTGATTTCGAC 672
|||||||| ||| |||| || | || ||||| |||| |||||||| | | ||||| |||
Sbjct 548 ATCCGAGGTATATTTTCGCGCTCAGAAAGATTTGATGCAAATGGATTTAC-GATTTTGAC 606
Query 673 GATTGAAGATGTAGTAACCA--CACTAAAT-CGAGAAGGTTTTTGGTTAAATGTTCAGCA 729
|||| |||| | ||||||| || | | | | | ||||||||||||||||| |||||||
Sbjct 607 GATTCAAGA--T-GTAACCATGCAGTTATTACCAAAAGGTTTTTGGTTAAATATTCAGCA 663
Query 730 CGATGCGTTCTATGAGCAACAGAATCTGAGCATGAGCAGTTTTCTGTTATCAGTTTCAAG 789
|||||||||||| |||||||| ||| |||||||||| |||||||||||||| ||||||||
Sbjct 664 CGATGCGTTCTACGAGCAACAAAATTTGAGCATGAGTAGTTTTCTGTTATCTGTTTCAAG 723
Query 790 AACTGTTTCCATTGACTTCATATCTTCCCCTGAAGTGAACTTCTTTAAGAAAATTACT-G 848
||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||| | |
Sbjct 724 AACTGTTTCCATTGACTTCATCTCTTCCCCTGAGGTGAATTTCTTTAGGAAAATT-GTCG 782
Query 849 GCAGTTTTGGGCGTAACGGACCGACTTTTGTGTTCCAGTTTCTTGGGAAAGAAGATTTCG 908
|| |||| || ||||| ||||||| ||||||||||||||||||| ||||||| |||||||
Sbjct 783 GCCGTTTCGGACGTAATGGACCGAGTTTTGTGTTCCAGTTTCTTAGGAAAGAGGATTTCG 842
Query 909 AGCCGACAACAAACCGAACATACGGTTCTATCTTGAGTAACCTAACCTTTGTCAAGACGT 968
||||||| | |||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct 843 AGCCGACCATGAACCGAACCTACGGTTCAATCTTGAGTAACCTAACGTTTGTCAAGACGT 902
Query 969 TTGCTTCAGGGATTCTTGTTCCAAAGTCTTACATATTGCCACTTGATGACGAACAGTACT 1028
|||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||
Sbjct 903 TTGCTTCAGGGATTCTTGTTCCCAAGTCTTACATATTGCCAATTGATGAGGAACAGTACT 962
Query 1029 TGGTTCCACATACATCCTTAGTTCAAGATGCTCACAAAGCAGGATTACAAGTATATGTTT 1088
|| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 963 TGCTTCCTCATACATCCTTAGTTCAAGATGCTCATAAAGCAGGATTACAAGTATATGTGT 1022
Query 1089 CAGGTTTCGCAAATGACGTTGATATTGCATATAACTACAGTTCCGATCCAGTGTCCGAGT 1148
||||||| |||||||| ||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1023 CAGGTTTTGCAAATGATGTTGATATTGCATATAACTACAGTTTCGATCCAGTGTCTGAGT 1082
Query 1149 ATCTATCTTTTGTGGACAATGGAGATTTCTCTGTCGATGGTGTGCTCTCTGATTTTCCTA 1208
|||||||||||||||||||||| ||||| || || || |||||||||||||||||||| |
Sbjct 1083 ATCTATCTTTTGTGGACAATGGTGATTTTTCGGTTGACGGTGTGCTCTCTGATTTTCCCA 1142
Query 1209 TCACTGCATCTGCGGCCGTTGACTGCTTCTCCCACATTGGCCGAAACGCTACAAAACAAG 1268
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1143 TCACTGCATCTGCGACCGTTGACTGCTTCTCCCACATTGGCAGAAACGCTACAAAACAAG 1202
Query 1269 TGGATTTTCTTGTTATATCAAAAGATGGTGCGAGTGGGGACTATCCTGGATGTACAGAC- 1327
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1203 TGGATTTTCTTGTTATATCAAAAAATGGTGCGAGTGGGGACTATCCTGGATGTACAGACG 1262
Query 1328 TTGGCATATGAGAAGGCAATCAAAGATGGTGCTGATGTTATCGATTGCTCAGTCCAAATG 1387
|| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1263 TT-GCATATGAGAACGCAATCAAAGATGGTGCTGATGTTATTGATTGCTCAGTCCAAATG 1321
Query 1388 TCTAGCGACGGTGTACCCTTTTGCTTAAGATCGATTGATCTCCGGAATAGCATAGCGG-C 1446
|||||||||||| |||||||||||||||| || || ||||| || | || | | ||| |
Sbjct 1322 TCTAGCGACGGTATACCCTTTTGCTTAAGGTCAATAAATCTCGGGGACAGTACAACGGTC 1381
Query 1447 -CCTTCAAAATACTTT-TAGTAACCGCTCAACTTCTGTTCCTGAGATTAGCTCAGTTCCT 1504
|| |||| | |||| ||| ||||| |||||| ||||||||||||||||||||||| ||
Sbjct 1382 GCC--CAAACT-CTTTATAGCAACCGTTCAACTCCTGTTCCTGAGATTAGCTCAGTTGCT 1438
Query 1505 GGAATATTCACTTTTAGTCTCACATGGCCTGAGATCCAGAGCTTGACTCCTGCTATTTCA 1564
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1439 GGAATATACACTTTTAGTCTCACATGGCCTGAGATCCAGAACTTGACTCCTGCTATTTCA 1498
Query 1565 AA-CCC--CTTCAGGGTTTATAGAATTTTTAGGAATCCGAGAGAGAAAAATTCAGGGAAG 1621
|| ||| |||||||||||| | |||| || ||||||| ||||||||||||||||| |
Sbjct 1499 AACCCCTACTTCAGGGTTTACGGTATTTCCAGAAATCCGAAAGAGAAAAATTCAGGGACG 1558
Query 1622 CTCATTTCCCTTTCTCAATTCCTAGACTTGGCAAA-AACTTACACTTCTCTCTCCGGTGT 1680
|||||||||||||| |||||||||||| ||||||| || |||||||||||||||||||||
Sbjct 1559 CTCATTTCCCTTTCCCAATTCCTAGACCTGGCAAAGAA-TTACACTTCTCTCTCCGGTGT 1617
Query 1681 TTTGATCAGTGTAGAGAATGCAGCATACTTGAGAGAGAAGCAAGGGCTTGACGTGGTTCA 1740
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1618 TTTGATCAGTGTAGAGAATGCAGCATACTTGAGAGAGAAGCAAGGGCTCGACGTGGTTCA 1677
Query 1741 AGCGGTTCTCGATACACTCACCGAAGCTGGTTACAGCAATGGAACAACCACAACAAAGGT 1800
||||||||||||||||||||| ||| ||||||||| |||||| |||||||||||||||||
Sbjct 1678 AGCGGTTCTCGATACACTCACGGAAACTGGTTACAACAATGGGACAACCACAACAAAGGT 1737
Query 1801 CATGATTCAGTCTACGAACAGCTCGGTTCTAGTTGACTTCAAGAAGCAGAGCAAGTACGA 1860
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1738 CATGATTCAGTCTACCAACAGCTCAGTTCTAGTTGACTTCAAGAAGCAGAGCAAGTACGA 1797
Query 1861 GACTGTGTACAAAATTGAAGAAACCATTGGTAATATTCGTGACT-CGGCCATCGAAGACA 1919
|||||| ||||||||||||||||||||||||||||||||||||| || |||| |||||||
Sbjct 1798 GACTGTCTACAAAATTGAAGAAACCATTGGTAATATTCGTGACTACG-CCATTGAAGACA 1856
Query 1920 TAAAGAAGTTCGCTAACGCTGTTGTCATCAACAAAGATTCAGTCTTTCCTAACTCTGATT 1979
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1857 TAAAGAAATTTGCTAACGCTGTTGTCATCAACAAAGATTCAGTCTTTCCTAACTCTGATT 1916
Query 1980 CGTTTCTCACTG-GCCAAACCAATGTTGTGGAGAGGTTGCAGAAGTCTCAGCTCCCGGTT 2038
|||||||||| || ||||||| ||||||||||| || |||||||||||||| |||||
Sbjct 1917 TGTTTCTCACTAAGC-AAACCAAAGTTGTGGAGAGACTGAAGAAGTCTCAGCTCACGGTT 1975
Query 2039 TATGTAGAACTGTTTAGGAATGAGTTTGTCTCTCAAGCATATGACTTCTTCTCTGATGCA 2098
||||| ||||||||| ||||||||||||| || ||||||| |||||||||| ||||||||
Sbjct 1976 TATGTGGAACTGTTTCGGAATGAGTTTGTATCGCAAGCATTTGACTTCTTCGCTGATGCA 2035
Query 2099 ACCGTAGAGATAAACGCATATATCTATGGAGCTGGTATCAATGGAACCATCACAGAGTTC 2158
|| || ||||||||| ||||||||| ||| || ||| |||||||||||||||||||||||
Sbjct 2036 ACTGTTGAGATAAACACATATATCTCTGGCGCCGGTCTCAATGGAACCATCACAGAGTTC 2095
Query 2159 CCTTTCACAGCTGCAAGATACAAAAGGAATCGATGTTTGGGTAGAGAAGAAGTACCACCT 2218
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2096 CCTTTCACAGCTGCAAGATACAAAAGGAATCGATGTTTGGGTAGAAAAGAAATACCACCT 2155
Query 2219 TACATGTTACC-AGTT-AACCCCGGTGGCCTCTTAAACGTTATGAGTCCTCTGTCCTTAC 2276
|| |||||||| | || ||||| |||||||||||| | |||||| ||||||| ||||||
Sbjct 2156 TATATGTTACCTA-TTCAACCC-GGTGGCCTCTTAGCCATTATGAATCCTCTGGCCTTAC 2213
Query 2277 CTCCAGCACAAGCTCCAAACC 2297
||||||| |||||||||||||
Sbjct 2214 CTCCAGCCCAAGCTCCAAACC 2234
Score = 379 bits (205), Expect = 5e-104
Identities = 238/254 (94%), Gaps = 2/254 (1%)
Strand=Plus/Plus
Query 1 ATGAGTCAACTAATAAAGCCAGTTGATaaaaaaaaaGCTCTCGAGTCTCTCTGTACTTCT 60
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 1 ATGAGTCAACTAATAAAGCCACTTGATAAAAAAAAAGCTCTTGAGTCTCTCTGTACTTCT 60
Query 61 CCTCTACGTGTTCAATGCTTATGCATTCA-AAAATAAAACAGAAAACATACCGATGAATT 119
|||||| |||||||||||||||||||| | ||||| ||||| |||||||||||||||||
Sbjct 61 CCTCTATGTGTTCAATGCTTATGCATT-ACAAAATTAAACATTAAACATACCGATGAATT 119
Query 120 CCAGGCCAAGTAATCCGACAAAGCTCGTAATACGATCTTCAACGCTTTTATTCTGTGGTG 179
|| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 120 CCCGGCCAGGTAATCCGACAAAGCTCGTAATACGATCTTCAACACTTTTATTCAGTGGTG 179
Query 180 TTGTTCTCATTCATCTTTTTGCTGCTCAAATTGATGCTCAAAGATCAACAAGTCGATGGC 239
||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 180 TTGTTCTGATTCAGCTATTTGCTGCTCAAATTGATGCTCAAAGATCTACAAGTCGATGGC 239
Query 240 AGACGCTCAATGGT 253
||||||||||||||
Sbjct 240 AGACGCTCAATGGT 253
> Ahg475793 jgi|Araly1|475793|fgenesh2_kg.2__923__AT1G66980.1
Length=3307
Score = 2318 bits (1255), Expect = 0.0
Identities = 1830/2103 (87%), Gaps = 58/2103 (3%)
Strand=Plus/Plus
Query 318 GTGATGCTCCACTGGTGATTGCTCGTGGTGGGTTCTCTGGATTGTATCCAGATTCGAGTA 377
|||| |||||||| ||||||||||||||||| || |||||| | | ||||||||| |||
Sbjct 86 GTGAAGCTCCACTAGTGATTGCTCGTGGTGGATTTTCTGGACTATTTCCAGATTCTAGTC 145
Query 378 TCGCTGCTTATCAACTTGCAACCCTGACAAGTGTAG-CCGATGTTGTTCTATGGTGTGAT 436
||||||| |||||| |||||| | | ||||||||| || | ||||||||||||||||||
Sbjct 146 TCGCTGCATATCAATTTGCAATGCAGGCAAGTGTAGACC-AAGTTGTTCTATGGTGTGAT 204
Query 437 -TTGCAGCTAACAAAAGATG-GGCTTGGGATTTGCTTCCCTGATTTAAATCTGGCCAATG 494
|| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 205 GTT-CAGCTAACTAAAGATGAAG-TTGGGATTTGCTTCCCTGATTTAAATCTGGCCAATG 262
Query 495 CTTCAACTATTGATCG-TGTTTACCCAAATCGT-GAAAAATCTTACTCTGTTAATGGAGT 552
|||||| ||| | | ||||||| ||| |||| ||||| |||||| | |||||||||||
Sbjct 263 CTTCAAATATACAA-GATGTTTACTCAACTCGTCGAAAA-TCTTACCCGGTTAATGGAGT 320
Query 553 CACTACTAAGGGTTGGTTCCCCAATGATTTCTCCTTGACAGAGCTCCAGAAT-TTTT-TA 610
||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||| |
Sbjct 321 CACTACTCAGGGTTGGTTCCCCATTGATTTCTCCTTGACAGAGCTCCAGAATGTTTTGTT 380
Query 611 TT----GATCCGAGGAATACTT-TCACGAACCGATAGATTCGATGGAAATGGATAT-CTG 664
|| ||||||||||||| || || || | || | |||||||| |||||||| | | |
Sbjct 381 TTCCTTGATCCGAGGAATA-TTATCGCGCTCAGAAAAATTCGATGAAAATGGATTTGC-G 438
Query 665 ATTTCGACGATTGAAGATGTAGTAAC-CACACTAAAT-CGAGAAGGTTTTTGGTTAAATG 722
|||||||||||| |||||||| ||| | || | | | | | |||||||||||||||||
Sbjct 439 ATTTCGACGATTCAAGATGTA--AACACGCAGTTATTACCAAAAGGTTTTTGGTTAAATA 496
Query 723 TTCAGCACGATGCGTTCTATGAGCAACAGAATC-TGAGCATGAGCAGTTTTCTGTTATCA 781
||||||||||||||||||| |||||||| ||| | || |||||||||||||| ||||||
Sbjct 497 TTCAGCACGATGCGTTCTACGAGCAACAAAATTAT-AGTATGAGCAGTTTTCTATTATCA 555
Query 782 GTTTCAAGAACTGTTTCCATTGACTTCATATCTTCCCCTGAAGTGAACTTCTTTAAGAAA 841
| | ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||
Sbjct 556 GCTGCAAGAACTGTTTCCATTGACTTCATATCTTCCCCTGAGGTGGGTTTCTTTAGGAAA 615
Query 842 ATTACTGGCAGTTTTGGGCGTAACGGACCGACTTTTGTGTTCCAGTTTCTTGGGAAAGAA 901
||| ||||| ||| ||||| |||||||||| ||| ||||||||||||||||||||||||
Sbjct 616 ATTGCTGGCCGTTACGGGCGCAACGGACCGAGTTTCGTGTTCCAGTTTCTTGGGAAAGAA 675
Query 902 GATTTCGAGCCGACAACAAACCGAACATACGGTTCTATCTTGAGTAACCTAACCTTTGTC 961
||||| |||||||||||||||||||| || ||||||||||| | ||||||||| | ||||
Sbjct 676 GATTTTGAGCCGACAACAAACCGAACCTATGGTTCTATCTTCAATAACCTAACATATGTC 735
Query 962 AAGACGTTTGCTTCAGGGATTCTTGTTCCAAAGTCTTACATATTGCCACTTGATGACGAA 1021
||||| ||||||||||| ||||| ||||| |||||||||||||||||||| |||||| ||
Sbjct 736 AAGACCTTTGCTTCAGGAATTCTCGTTCCCAAGTCTTACATATTGCCACTCGATGACAAA 795
Query 1022 CAGTACTTGGTTCCACATACATCCTTAGTTCAAGATGCTCACAAAGCAGGATTACAAGTA 1081
|| |||||| |||| | ||||||||||||||||||||||||||| ||||||||| || ||
Sbjct 796 CACTACTTGCTTCCTCCTACATCCTTAGTTCAAGATGCTCACAAGGCAGGATTAAAACTA 855
Query 1082 TATGTTTCAGGTTTCGCAAATGACGTTGATATTGCATATAACTACAGTTCCGATCCAGTG 1141
|||| |||||||| |||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 856 TATGCGTCAGGTTTTGCAAATGATGTTGATATTGCATATAACTACAGTTGGGATCCAGTT 915
Query 1142 TCCGAGTATCTATCTTTTGTGGACAATGGAGATTTCTCTGTCGATGGTGTGCTCTCTGAT 1201
|| || |||||||||||||| |||||||| | ||| ||||||||||||||||||||||||
Sbjct 916 TCTGAATATCTATCTTTTGTTGACAATGGCGTTTTTTCTGTCGATGGTGTGCTCTCTGAT 975
Query 1202 TTTCC-TATCACTGCATCTGCGGCCGTTGACTGCTTCTCCCACATTGGCCGAAACGCTAC 1260
||||| | | ||||||||||| | |||||||||||||||||| ||||| ||||||||||
Sbjct 976 TTTCCCT-TAACTGCATCTGCATCTGTTGACTGCTTCTCCCACGTTGGCAGAAACGCTAC 1034
Query 1261 AAAACAAGTGGATTTTCTTGTTATATCAAAAGATGGTGCGAGTGGGGACTATCCTGGATG 1320
|||||||||||||||||||||||| |||||| |||| ||||||||||| |||||||||||
Sbjct 1035 AAAACAAGTGGATTTTCTTGTTATCTCAAAAAATGGCGCGAGTGGGGATTATCCTGGATG 1094
Query 1321 TACAGACTTGGCATATGAGAAGGCAATCAAAGATGGTGCTGATGTTATCGATTGCTCAGT 1380
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct 1095 TACAAACTTGGCATATGAGAAGGCAATCAGAGATGGTGCTGATGTTATCGATTGCCCAGT 1154
Query 1381 CCAAATGTCTAGCGACGGTGTACCCTTTTGCTTAAGATCGATTGATCTC-CGGAATAGCA 1439
|||||||||||||||||| ||||||||||| ||| ||||| |||||| || || ||||
Sbjct 1155 TCAAATGTCTAGCGACGGTATACCCTTTTGCGCAAGTTCGATAGATCTCGCG-AACAGCA 1213
Query 1440 TAGCGGCCCTTCAAAATACTTTT-AGTAACCGCTC-A-ACTTCTGTTCCTGAGATTAGCT 1496
| ||| | |||| | | | | || ||||| || | | || ||||||||||||||||
Sbjct 1214 CAACGGTCAACCAAACT-CATCTCAGAAACCGTTCCATAATT--GTTCCTGAGATTAGCT 1270
Query 1497 CAGTTCCTGGAATATTCACTTTTAGTCTCACATGGCCTGAGATCCAGAGCTTGACTCCTG 1556
||| | |||||||||| ||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 1271 CAGCTGCTGGAATATTTACTTTTAGTCTCACATGGCATGAGATCCAGAGTTTGACTCCTG 1330
Query 1557 CTATTTCAAACCCCTTCAGGGTTTATAGAATTTTTAGGAATCCGAGA-GAGAAAAATTCA 1615
|||| |||||||| || ||| |||| || || | |||||||||| | ||| ||||||
Sbjct 1331 CTATCTCAAACCCGTTTAGGCTTTACAGTATGTCCAGGAATCCGA-ATGAGGGAAATTCT 1389
Query 1616 GGGAAGCTCATTTCCCTTTCTCAATTCCTAGACTTGGCAAAAA-CTTACACTTCTCTCTC 1674
||||| || ||||| || | | |||||||| |||||||||||| || | ||||||||||
Sbjct 1390 GGGAACCTTATTTCACTCTATGAATTCCTAAACTTGGCAAAAAACTC-CTCTTCTCTCTC 1448
Query 1675 CGGTGTTTTGATCAGTGTAGAGAATGCAGCATACTTGAGAGAGAAGCAAGGGCTTGACGT 1734
|||||||||||||||| ||||||||| | |||| | |||||||||||||| || |||||
Sbjct 1449 CGGTGTTTTGATCAGTCTAGAGAATGTAATATACCTAAGAGAGAAGCAAGGACTCGACGT 1508
Query 1735 GGTTCAAGCGGTTCTCGATACACTCACCGAAGCTGGTTACAGCAATGGAACAACCACAAC 1794
||| ||| ||||| ||| |||||| ||| ||||||||| | ||||||| | ||
Sbjct 1509 AGTTAAAGTAGTTCTTAATAGACTCACGGAAACTGGTTACATCTTTGGAACATT-A-AA- 1565
Query 1795 AAAGGTCATGATTCAGTCTACGAACAGCTCGGTTCTAGTTGACTTCAAGAAGCAGAGCAA 1854
|||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||
Sbjct 1566 ---GGTCATGATTCAGTCTACGACCAGCTTGGTTCTAGTTGACTTCAAGAATCAGAGCAA 1622
Query 1855 GTACGAGACTGTGTACAAAATTGAAGAAACCATTGGTAATATTCGTGACTCGGCCATCGA 1914
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1623 GTACGAGACTGTCTACAAAATTGAAGAAACCATTGGTAATATTCGTGACTCGGCCATTGA 1682
Query 1915 AGACATAAAGAAGTTCGCTAACGCTGTTGTCATCAACAAAGATTCAGTCTT-TCCTAACT 1973
|||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1683 AGACATAAAGAAATTCGCTAACGCTGTTGTCATCAACAAAGATTCAGT-TTCTCCTAACT 1741
Query 1974 CTGATTCGTTTCTCACTGGCCAAACCAATGTTGTGGAGAGGTTGCAGAAGTCTCAGCTCC 2033
|||| |||||| |||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1742 CTGAATCGTTTGTCACGGGGCAAACAAATGTTGTGGAGAGGTTGCAGAAGTCTCAGCTCC 1801
Query 2034 CGGTTTATGTAGAACTGTTTAGGAATGAGTTTGTCTCTCAAGCATATGACTTCTTCTCTG 2093
|||||||||| ||||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct 1802 CGGTTTATGTGGAACTGTTTCGGAATGAGTTTGTCTCTCAACCATATGACTTCTTCGCTG 1861
Query 2094 ATGCAACCGTAGAGATAAACGCATATATCTATGGAG-CTGGTATCAATGGAACCATCACA 2152
||||||| || ||||||||| ||||||||| |||| | |||||||||||||||||||||
Sbjct 1862 ATGCAACTGTTGAGATAAACACATATATCTCTGGACAC-GGTATCAATGGAACCATCACA 1920
Query 2153 GAGTTCCCTTTCACAGCTGCAAGATACAAAAGGAATCGATGTTTGGGTAGAGAAGAAGTA 2212
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1921 GAGTTCCCTTTCACAGCTGCAAGATACAAAAGGAATCGATGTTTGGGTAGAAAAGAAATT 1980
Query 2213 CCACCTTACATGTTACC-AGTT-AACCCCGGTGGCCTCTTAAACGTTATGAGTCCTCTGT 2270
||||||||||||||||| | || ||||| |||||||||||| | |||||| |||||||
Sbjct 1981 CCACCTTACATGTTACCTA-TTCAACCC-GGTGGCCTCTTAGCCATTATGAATCCTCTGG 2038
Query 2271 CCTTACCTCCAGCACAAGCTCCAAACCAGGATTT-CATAGAGGCTGATGTCACTGAGCCA 2329
||||||||||||| ||||||||||||| | |||| || | | | ||||||||||||||||
Sbjct 2039 CCTTACCTCCAGCCCAAGCTCCAAACCCG-ATTTTCACATATGATGATGTCACTGAGCCA 2097
Query 2330 CCACTATCTCCGGTTATAGCAAAAGCTCCAACCTCAACCCCTGGAAC-TCCCTCAACCAT 2388
|||||| ||||||||||||||||| | |||||||||||||||||||| || ||||||||
Sbjct 2098 CCACTACCTCCGGTTATAGCAAAATCCCCAACCTCAACCCCTGGAACATCA-TCAACCAT 2156
Query 2389 TGC 2391
|||
Sbjct 2157 TGC 2159
> Ahg492137 jgi|Araly1|492137|fgenesh2_kg.7__1570__AT4G26690.1
Length=2672
Score = 2058 bits (1114), Expect = 0.0
Identities = 1907/2276 (84%), Gaps = 109/2276 (5%)
Strand=Plus/Plus
Query 318 GTGATGCTCCAC-TGGTGATTGCTCGTGGTGGGTTCTCTGGATTGTATCCAGATTCGAG- 375
||||| |||| | | ||||| ||||| |||||||| |||||||||| ||||||||||||
Sbjct 204 GTGATCCTCC-CTTTGTGATAGCTCGGGGTGGGTTTTCTGGATTGTTTCCAGATTCGAGT 262
Query 376 TATCGCTGCTTATCAACTT-GCAACCCTGACAAGTGTAGCCGATGTTGTTCTATGGTGTG 434
|| || |||||| ||| || |||| ||||||||||| | |||||||||||||||||||
Sbjct 263 TA-CGATGCTTA-CAATTTCGCAATGTTGACAAGTGTATCAGATGTTGTTCTATGGTGTG 320
Query 435 AT-TTGCAGCTAACAAAAGATGGGCTTGGGATTTGCTTCCCTGATTTAAATCTG-GCCAA 492
|| || |||||||| ||||||| ||||| ||||||||||||||||||| | || | |||
Sbjct 321 ATGTT-CAGCTAACCAAAGATGCTCTTGGTATTTGCTTCCCTGATTTAACTATGAG-CAA 378
Query 493 TGCTTCAACTATTGATCG-TGTTTACCCAAATCGTGAAAAATCTTACTCTGTTAATGGAG 551
||||||| ||||||| | ||||||||| | ||| ||||||||||| | ||||| ||||
Sbjct 379 TGCTTCATCTATTGA-AGTTGTTTACCCTACTCGACAAAAATCTTACCCGGTTAACGGAG 437
Query 552 -TCACTACTAAGGGTTGGTTCCCCAATGATTTCTCCTTGACAGAGCTCCAGAA-TTTTTT 609
|| ||||| ||||||||| ||| |||||||||||||| ||| || || || | ||
Sbjct 438 TTC-CTACTTCCGGTTGGTTCACCATTGATTTCTCCTTGAAAGATCT-CA-AAGCTGTTA 494
Query 610 A-TTGATCCGAGGAATACTT-TCACGAACCGATAGATTCGATGG-AAATGGATATCTGAT 666
| |||| ||||| ||| || || || | || | ||||||||| || | | | | |||
Sbjct 495 ACCTGATACGAGGTATA-TTATCTCGGTCTGAAAAATTCGATGGTAATTCTA-ACCCGAT 552
Query 667 T-TCGACGATT-GAAGATGTAGTAAC-CACACT-AAATCGAGAAGGTT-TT-TGGTTAAA 720
| | |||| || ||| |||| || || | | ||| | | | || || ||||| ||
Sbjct 553 TAT-GACGGTTCAAAG-CGTAGCCACGCAGA-TGAAA-CCATCA--TTCTTCTGGTTGAA 606
Query 721 TGTTCAGCACGATGCGTTCTATGAGCAACAGAATCTGAGCATGAGCAGTTTTCT-GTTAT 779
|||||||||||||||||| || | |||||||||| ||||||| ||||||||||| |||
Sbjct 607 TGTTCAGCACGATGCGTTTTACGCGCAACAGAATTTGAGCATTAGCAGTTTTCTGGTT-G 665
Query 780 CAGTTTCAAGAACTGTTTCCATTGACTTCATATCTTCCCCTGAAGTGAACTTCTTTAAGA 839
| | ||||| ||||||| ||||||||||||| ||||||||||| ||||| ||||||| ||
Sbjct 666 CCGCTTCAAAAACTGTTCCCATTGACTTCATCTCTTCCCCTGAGGTGAATTTCTTTAGGA 725
Query 840 AAATTACTGG-CAGTTTTGGGCGTAACGGACCGACTTTTGTGTTCCAGTTTCTTGGGAAA 898
||||| |||| | |||| |||||||| ||||| | | ||||||||| |||||| || ||
Sbjct 726 AAATTTCTGGTC-GTTTCGGGCGTAATGGACCTAGTCTTGTGTTCCGGTTTCTCGGTCAA 784
Query 899 GAAGATTTCGAGCCGACAACAAACCGAACATACGGTTCTATCTTGAGTAACCTAACCTTT 958
||||| |||||||| ||||||||| |||| ||||| ||||||||||||||||| || |||
Sbjct 785 GAAGAGTTCGAGCCAACAACAAACAGAACCTACGGCTCTATCTTGAGTAACCTGACTTTT 844
Query 959 GTCAAGACGTTTGCTTCAGGGATTCTTGTTCCAAAGTCTTACATATTGCCACTTGATGAC 1018
|||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct 845 GTCAAGACTTTTGCTTCAGGGATCCTTGTTCCCAAGTCTTACATATTGCCACTCGATGAC 904
Query 1019 GAACAGTACTTGGTTCCACATACATCCTTAGTTCAAGATGCTCACAAAGCAGGATTACAA 1078
| ||||||||| |||| | ||||||||||||||||||||||||||||||||||||| ||
Sbjct 905 CAGCAGTACTTGCTTCCTCCTACATCCTTAGTTCAAGATGCTCACAAAGCAGGATTAGAA 964
Query 1079 GTATATGTTTCAGGTTTCGCAAATGACGTTGATATTGCATATAACTACAGTTCCGATCCA 1138
|| | ||| |||||||| |||||||| ||||||||||| || ||||||||| |||||||
Sbjct 965 GTTTTTGTGTCAGGTTTTGCAAATGATATTGATATTGCACATGACTACAGTTTCGATCCA 1024
Query 1139 GTGTCCGAGTATCTATCTTTTGTGGACAATGG-AGATTTCTCTGTCGATGGTGTGCTCTC 1197
|| || |||||||||||||||||||||||||| | ||||||||||||||||||||||| |
Sbjct 1025 GTCTCTGAGTATCTATCTTTTGTGGACAATGGCA-ATTTCTCTGTCGATGGTGTGCTCAC 1083
Query 1198 TGATTTTCCTATCA-CTGCATCTGCGGCCGTTGACTGCTTCTCCCACATTGGCCGAAACG 1256
|||||||||||| | |||||||||| || | || |||||||||||||||||| ||||||
Sbjct 1084 TGATTTTCCTAT-ATCTGCATCTGCATCCCTCGATTGCTTCTCCCACATTGGCAGAAACG 1142
Query 1257 CTACAAAACAAGTGGATTTTCTTGTTATAT-CAAAAGATGGTGCGAGTGGGGACTATCCT 1315
|||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||
Sbjct 1143 CTACAAAACAAGTGGATTTTCTTGTTATATCCAAAA-ATGGTGCGAGTGGAGACTATCCT 1201
Query 1316 GGATGTACAGACTTGGCATATGAGAAGGCAATCAAAGATGGTGCTGATGTTATCGATTGC 1375
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1202 GGATGTACAGACTTGGCATATGAGAAGGCAATCAAAGATGGTGCTGATGTAATCGATTGC 1261
Query 1376 TCAGTCCAAATGTCTAGCGACGGTGTACCCTTTTGCTTAAGATCGATTGATCTCCGGAAT 1435
|| ||||||||||| |||||||| |||| |||||||||| ||||| |||||| ||||
Sbjct 1262 TCGGTCCAAATGTCCAGCGACGGCACACCCATTTGCTTAAGTTCGATCGATCTCGGGAAC 1321
Query 1436 AGCATAGC-G--GCCCTTCAAAATACTTTTAGTAACCGCTCAACTTCTGTTCCTGAGATT 1492
|||| | | | ||||| || | |||| || ||||| ||||| ||||||||||| ||
Sbjct 1322 AGCACAACAGTTGCCCT--AAC-TGCTTTCAGAAACCGTTCAACAACTGTTCCTGAG-TT 1377
Query 1493 AG-CTCAGTTCCTGGAATATTCACTTTTAGTCTCACATGGCCTGAGATCCAGAGCTTGAC 1551
| |||| || |||||||| |||||| ||||||||||||||||||||||||| ||||||
Sbjct 1378 GGGCTCACTTGGTGGAATATACACTTTCAGTCTCACATGGCCTGAGATCCAGACCTTGAC 1437
Query 1552 TCCTGCTATTTCAAACCCCTTCAGG-GT-TTATAGAATTTTTAGGAATCCGAGAG-AGAA 1608
|||||||||||||||||||| | || || || || | ||||||||||| | | ||||
Sbjct 1438 TCCTGCTATTTCAAACCCCTAC-GGTGTATTC-AGGCTGTTTAGGAATCCAA-ACCAGAA 1494
Query 1609 AAATTCAGGGAAGCTCATTTCCCTTTCTCAATTCCTAGACTTGGCAAA-AACTTACACTT 1667
|||| | |||||||| |||| |||||| | || || |||||||||| |||| ||| |
Sbjct 1495 AAATGCTGGGAAGCTTTTTTCACTTTCTGATTTTTTAAACTTGGCAAAGAACTC-CACCT 1553
Query 1668 CTCTCTCCGGTGTTTTGATCAGTGTAGAGAATGCAGCATACTTGAGAGAGAAGCAAGGGC 1727
|||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||
Sbjct 1554 CTCTCTCCGGTGTTTTGATCAGTGTAGAGAATGCGGCATACCTGAGAGAGAATCAAGGGC 1613
Query 1728 TTGACGTGGTTCAAGCGGTTCTCGATACACTCAC-C-GAAGCTGGTTACAGCAATGGA-A 1784
| ||||| ||| |||||||||| ||||||||||| | || |||| ||||||||| | |
Sbjct 1614 TCGACGTTGTTAAAGCGGTTCTTGATACACTCACACAGA--CTGGCTACAGCAATA-ATA 1670
Query 1785 CAACCACAACAAAGGTCATGATTCAGTCTACGAACAGCTCGGTTCTAGTTGACTTCAAGA 1844
|| |||||| | ||||||||||||||| || |||||||| |||||||||||||||||||
Sbjct 1671 CAGCCACAA-A--GGTCATGATTCAGTCAACAAACAGCTCAGTTCTAGTTGACTTCAAGA 1727
Query 1845 AGCAGAGCAAGTACGAGACTGTGTACAAAATTGAAGAAACCATTGGTAATATTCGT-GAC 1903
|||||||||||||||||||||| || ||| ||||||||| ||| || |||||| | |||
Sbjct 1728 AGCAGAGCAAGTACGAGACTGTCTATAAAGTTGAAGAAAACATCCGTGATATTC-TCGAC 1786
Query 1904 TCGGCCATCGAAGACATAAAGAAGTTCGCTAACGCTGTTGTCATC-AACAAAG-ATTCAG 1961
|| || || |||||||||||||| |||||| | |||||||| ||| || ||| || |||
Sbjct 1787 TCTGCTATTGAAGACATAAAGAAATTCGCTGATGCTGTTGTGATCCAA-AAATCAT-CAG 1844
Query 1962 TCTTTCCTAACTCTGATTCGTTTC-TCACTG-GCCAAACCAATGTTGTGGAGAGGTTGCA 2019
|||||||| | || | ||||| | |||| || |||||||||||||||||| | ||||
Sbjct 1845 TCTTTCCTCTCGCTCAGTCGTT-CATCACAACGC-AAACCAATGTTGTGGAGAAGCTGCA 1902
Query 2020 GAAGTCTCAGCTCCCGGTTTATGTAGAACTGTTT-AGGAATGAGTTTGTCTCTCAAGCAT 2078
||||||||||||||| |||||||| ||||||||| || ||||||||| | |||||| |||
Sbjct 1903 GAAGTCTCAGCTCCCAGTTTATGTGGAACTGTTTCAG-AATGAGTTTTTATCTCAACCAT 1961
Query 2079 ATGACTTCTTCT-CTGATGCAACCGTAGAGATAAACGCATATATCTA-TGGAGCTGGTAT 2136
|||||||||| | ||||||||||||| ||||||||| | |||||| | |||||| |||||
Sbjct 1962 ATGACTTCTT-TGCTGATGCAACCGTTGAGATAAACTCTTATATC-ACTGGAGCCGGTAT 2019
Query 2137 CAATGGAACCATCACAGAGTTCCCTTTCACAGCTGCAAGATACAAAAGGAATC-GATGTT 2195
|| ||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||
Sbjct 2020 AAACGGAACCATCACCGAGTTTCCTTTCACAGCTGCAAGATACAAAAGGAATCTG-TGTT 2078
Query 2196 TGGGTAGAGAAGAAG-TACCACCTTACATGTTACCAGTT-AACCCCGGTGGCCTCTTAAA 2253
|||| ||| ||||| || |||||||||| || | ||||| |||| ||||||||
Sbjct 2079 TGGGAAGAAAAGAAACTAT-ACCTTACATGGCCCCTGCCCAACCC-GGTGCCCTCTTAAC 2136
Query 2254 CGTTATGAGTCCT-CTGTCCTTACCTCCAGCACAAGCTCCAAACCAGGATTTCATAGAGG 2312
| || |||||||| | ||||||||||||||| |||||||||| || || ||||||||| |
Sbjct 2137 CCTTGTGAGTCCTAC-GTCCTTACCTCCAGCCCAAGCTCCAAGCCCGGTTTTCATAGATG 2195
Query 2313 CTGATGTCACTGAGCCACCACTATCTCCGGTTATAGCAAAAGCTCCAACCTCAACCCCTG 2372
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 2196 CTGATGTCACTGAGCCACCACTACCTCCGGTTATAGCAAAAGCCCCAACCTCAACCCCTG 2255
Query 2373 GAACTCCC-TCAACCATTGCTCAAGCACCTAGCGGACAAACCCGACTTAAGCTATCTCTT 2431
|||| ||| ||||||| ||| ||||||||||| |||||||||||| | | |||||| ||
Sbjct 2256 GAAC-CCCATCAACCAATGCACAAGCACCTAGTGGACAAACCCGAATCACTCTATCTGTT 2314
Query 2432 CTCCTCTCTGttttt----t--tCCT--C-TCTCTTCTACTTCTATGATCAACGCTAT-A 2481
|| || || |||||| | | || | || ||||||||||| |||||||| || | |
Sbjct 2315 CTACTTTCCGTTTTTGCAATGGTTCTTGCCTCCCTTCTACTTCTGTGATCAACCCT-TGA 2373
Query 2482 TCACATCTCTTCACTGTTTATAATGTCTTCCACCCTCATAAAGATTTCCTTGTGTG 2537
|| |||||| | | |||| |||||||||||| ||||| ||| ||||||| ||||||
Sbjct 2374 TCTCATCTCCT-A-TGTTGATAATGTCTTCCGCCCTCGTAA-GATTTCCCTGTGTG 2426
> Ahg925930 jgi|Araly1|925930|scaffold_201491.1
Length=260
Score = 115 bits (62), Expect = 2e-24
Identities = 69/72 (96%), Gaps = 2/72 (3%)
Strand=Plus/Plus
Query 1280 GTTATATC-AAAAGATGGTGCGAGTGGGGACTATCCTGGATGTACAGACTTGGCATATGA 1338
|||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 190 GTTATATCGAAAA-ATGGTGCGAGTGGGGACTATCCTGGATGTACAAACTTGGCATATGA 248
Query 1339 GAAGGCAATCAA 1350
||||||||||||
Sbjct 249 GAAGGCAATCAA 260
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100443976065
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5