BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G68980.1
Length=2033
Score E
Sequences producing significant alignments: (Bits) Value
Ahg476027 jgi|Araly1|476027|fgenesh2_kg.2__1157__AT1G68980.1 2723 0.0
Ahg339164 jgi|Araly1|339164|fgenesh1_pg.C_scaffold_2001263 1853 0.0
> Ahg476027 jgi|Araly1|476027|fgenesh2_kg.2__1157__AT1G68980.1
Length=1894
Score = 2723 bits (1474), Expect = 0.0
Identities = 1761/1899 (93%), Gaps = 22/1899 (1%)
Strand=Plus/Plus
Query 4 GAGACGATCCCTTGTTTCTCGAATGTTGAGAAAGACTCTAACTTTAATCTCACTAAGAAG 63
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GAGACGATTCCTTGTTTCTCGAATGTTGAGAAAGACTCTAACTTTAATCTCACTAAGAAG 60
Query 64 ACCCTTCTCTTCAA-TT--C-----CC-T---CTAAAACCCTAACCCCACACCAAAAGTC 111
|||||||||||||| || | || | ||||||||||||||||||||||||||||
Sbjct 61 ACCCTTCTCTTCAATTTCCCGAAAACCATCGCCTAAAACCCTAACCCCACACCAAAAGTC 120
Query 112 TTCCTTTGAATCAACTCTCCACCATTCCCTAATCACCCACGACACTGATCAAGCATGGAA 171
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 121 CTCCTTTGAATCTACTCTCCACCATTCACTAATCACCCACGACACTGATCAAGCATGGAA 180
Query 172 GGTCTTCCGATCCTTCGCTGCCGCTTCTTCTCTCCCGGACAAGCGTCTCCTCAATTCTCT 231
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 181 GGTCTTCCGATCCTTCGCCGCCGCTTCTTCTCTCCCCGACAAGCGTCTCCTCAATTCTCT 240
Query 232 CATCACCCACTTGTCCTCCTTCCACAACACAGATCAAAACACCTCCCTCAGGCACAGACT 291
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 241 CATCACCCACTTGTCCTCCTTCCACCACGCAGATCAAAACACCTCCCTCAGGCACAGACT 300
Query 292 CAAGCGTGCCTTTGTTTCCACGACTTATGTAATCGAGAAAGATCCGATTTTGCTTGAGTT 351
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 301 CAAGCGTGCCTTTGTTTCCACGACTTACGTCATCGAGAAAGATCCGATTTTGCTTGAGTT 360
Query 352 TGAGACCGTCCGTACGGTTCTCGAGTCGATGAAACTAGCGAAAGCTTCCGGGCCAGCATT 411
||||||| ||||||||||| | ||||| ||||||||||||||| ||||||||||||| ||
Sbjct 361 TGAGACCATCCGTACGGTTTTGGAGTCAATGAAACTAGCGAAAACTTCCGGGCCAGCGTT 420
Query 412 GGCTTTGGTGGAGTGTATGTTTAAAAACAGGTACTTTGTTCCTTTTGATCTCTGGGGG-G 470
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 421 GGCTTTGGTGGAGTGTATGTTTAAAAACAGGTACTTTGCTCCTTTTGATCTCTGGGGGCG 480
Query 471 ATTT-ACTTATCGATGTCTGTCGTGAAAATGGAAGCTTGGCTGCGTTTCTTAAGGTGTTT 529
||| | |||| ||| ||||| |||||| ||||||| ||||||||||||||||||| |||
Sbjct 481 -TTTGA-TTATTGATATCTGTAGTGAAACTGGAAGCCTGGCTGCGTTTCTTAAGGTTTTT 538
Query 530 AGGGAAAGTTGTAGAATTGCAGTAGATGAGAAGCTTGATTTTATGAAACCGGATTTGGTA 589
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 539 AGGGAAAGTTGTAGAATTGCAGTATATGAGAAGCTTGATTTTATGAAACCGGATTTGGTA 598
Query 590 GCGAGTAATGCAGCTCTTGAAGCGTGTTGTAGGCAGATGGAATCTTTGGCTGATGCTG-A 648
|| |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||| |
Sbjct 599 GCTAGTAATGCGGCTCTTGAAGCGTGTTGCCGGCAGTTGGAATCTCTGGCTGATGCTGAA 658
Query 649 GAATCTGATTGAATCTATGGATGTTTTAGGTGTGAAGCCTGATGAATTGAGCTTTGGGTT 708
| || ||||||||||||||| ||| || ||||||||||||||||||||||||||||||||
Sbjct 659 G-ATGTGATTGAATCTATGGCTGTGTTGGGTGTGAAGCCTGATGAATTGAGCTTTGGGTT 717
Query 709 TCTTGCTTATTTGTATGCGAGGAAGGGGCTTCGAGAGAAGATTAGTGAGCTTGAGGATTT 768
||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||
Sbjct 718 TCTTGCTTATTTGTATGCGAGAAAGGGGCTTCGAGAGAAGATAAGTGAGATTGAGAATTC 777
Query 769 GATGGATGGTTTAGGGTTTGCAAGTAGAAGAATTC-TTTATTCCAGTATGATCAGTGGAT 827
||||||||||| ||||||||||||||||||| || ||||||| ||| ||||||||||||
Sbjct 778 AATGGATGGTTTTGGGTTTGCAAGTAGAAGAA-TCTTTTATTCTAGTGTGATCAGTGGAT 836
Query 828 ATGTTAAGAGTGGTGATTTAGATAGTGCTTCTGATGTTATACTGTGTAGTCTTAAAGGAG 887
||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 837 ATGTTAAGAGTGGTGATTTAGATAGTGTTTCTGATGTTATACTGCATAGTCTTAAAGGAG 896
Query 888 TTGGAGAAGCCTCGAGTTTCAGTGAGGAAACGTACTGTGAATTGGTTAGAGGGTTCATAG 947
|||||||| |||||||||| ||||||||||||||||||||||||| | |||||| ||||
Sbjct 897 GTGGAGAAGACTCGAGTTTCGGTGAGGAAACGTACTGTGAATTGGTGAAAGGGTTTATAG 956
Query 948 AGAGTAAAAGCGTTGAGAGTTTAGCGAAACTGATCATCGAAGCTCAGAAG-TTGGAATCT 1006
|||||||||||||| || ||||||| |||||||| ||||||||||||||| || ||||||
Sbjct 957 AGAGTAAAAGCGTTAAGTGTTTAGCCAAACTGATAATCGAAGCTCAGAAGCTT-GAATCT 1015
Query 1007 ATGTCCACTGATGTTGGCGGATCAGTGGGGTTTGGAATCGTAAATGCTTGTGTCAAGCTC 1066
||||| ||| |||| ||| ||| | ||||||||||||||||||||||||| |||||||
Sbjct 1016 CTGTCCGTTGACGTTGACGGTTCAATTGGGTTTGGAATCGTAAATGCTTGTGCCAAGCTC 1075
Query 1067 GGATTTTCGGGTAAAAGTATTCTCGATGAATTGAATGCTCAGGGAGGATCTGGAGGGATT 1126
|| ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct 1076 GGTTTTTCGGGTAAAAGTATTCTCAATGAAATGAATGCTCAGGGAGGATCTGGTGGGATT 1135
Query 1127 GGTGTGTATGTGCCGATCTTGAAGGCTTATTGCAAAGAAGGCAGAACATCTGAAGCTACT 1186
|| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 1136 GGGGTGTATGTGCCGATCTTGAAGGCCTATTGCAAAGAAGGCAGAACAGATGAAGCTACT 1195
Query 1187 CAGCTTGTTACAGAGATCAGCAGCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACT 1246
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 CAGCTGGTTACAGAGATCAGCAGCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACT 1255
Query 1247 ATGATCGAAGCTTCCATGACGAAACATGATTTCCTATCTGCTCTTACATTGTTTAGGGAT 1306
|||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||
Sbjct 1256 ATGATCGAAGCTTCCATGACGAAACAGGATTTCCTATCTGCGCTTACACTGTTTAGGGAT 1315
Query 1307 ATGAGAGAAACAAGAGTGGCGGATCTGAAAAGATGCTACTTAACAATAATGACTGGTCTC 1366
||| ||||||||| ||| | ||| |||||||||||||||||||||||||||| ||||||
Sbjct 1316 ATGCGAGAAACAAAAGTATCAGATTTGAAAAGATGCTACTTAACAATAATGACAGGTCTC 1375
Query 1367 CTTGAGAATCAGAGACCTGAGTTAATGGCAGAGTTTGTGGAGGAAGTTATGGAAGATCCA 1426
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 1376 CTTGAGAATCAGAGACCTGAGTTAATGGGAGAGTTTGTGGAGGAAGTTGTGGAAGATCCT 1435
Query 1427 CGCGTAGAAGTGAAGTCCCATGATTGGAATTCGATTATCCATGCCTTTTGTAAATCTGGT 1486
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1436 CGCGTAGAAGTGAAGTCCCATGATTGGAATTCGATTATCCATGCCTTCTGCAAATCTGGG 1495
Query 1487 CGCCTAGGAGATGCAAAGAGTACATTCAGAAGGATGACTTTCCTTCAGTATGAGCCGAAT 1546
|| |||| |||||||||||||||||||||||||||| ||||||||||||| ||||| |||
Sbjct 1496 CGTCTAGAAGATGCAAAGAGTACATTCAGAAGGATGGCTTTCCTTCAGTACGAGCCAAAT 1555
Query 1547 AACCAGACATACTTGTCGTTGATCAATGGATACGTGAGCTGCGAGAAGTACTTCGAGGTG 1606
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1556 AACCAGACATACTTGTCGTTGATCAATGGATATGTGAGCTGCGAGAAGTACTTCGAGGTG 1615
Query 1607 GTGGTTATATGGAAAGAGTTCAAAGACAAGAAAGCAAAACTGGAGCATGCTCTTGCGGAT 1666
|||||| | ||||||||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct 1616 GTGGTTTTGTGGAAAGAGTTCAAAGACAAGAATGCAAAACTAGAGCATGCTCTTGCAGAT 1675
Query 1667 GCGTTCTTGAATGCATTGGTCAAAGGAGGCTTCTTTGGCACGGCGTTGCAAGTGATAGAG 1726
||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1676 GCGTTCTTGAATGCATTAGTCAAAGGAGGGTTCTTTGGCACGGCATTGCAAGTGATAGAG 1735
Query 1727 AAATGTCAGGAGATGAAGATATTCGTGGATAAGTGGAGGTATAAAGCAACGTTCATGGAG 1786
||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct 1736 AAATGTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTACAAGGCAACGTTCATGGAG 1795
Query 1787 ACTCAAAAGAATCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATGAAGAAAATTGAGTTT 1846
||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1796 ACTCAGAAGAACCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATAAAGAAAATGGAGTTG 1855
Query 1847 CTTGATGCCTTTAAGAATTGGGCTCGTATTACCACATGA 1885
||||||||||||||||| |||| | || |||||||||||
Sbjct 1856 CTTGATGCCTTTAAGAACTGGGTTGGTCTTACCACATGA 1894
> Ahg339164 jgi|Araly1|339164|fgenesh1_pg.C_scaffold_2001263
Length=3129
Score = 1853 bits (1003), Expect = 0.0
Identities = 1574/1839 (86%), Gaps = 81/1839 (4%)
Strand=Plus/Plus
Query 86 AAAACCCTAACCCCACACCAAAAGTCTTCCTTTGAATCAACTCTCCACCATTCCCTAATC 145
||||||||||||| | | ||||| || ||||||||||| || |||||| |||| ||| |
Sbjct 151 AAAACCCTAACCCAAGAGCAAAAATCCTCCTTTGAATCTACCCTCCACGATTCTTTAA-C 209
Query 146 -ACCCACGACACTGATCAAGCATGGAAGGTC-TTCCGATCCT-TCGCTGCCGCTTCTTCT 202
|||||| |||| ||| |||||||||||| | || |||| || || | ||||| ||||||
Sbjct 210 TACCCACAACACCGATGAAGCATGGAAGG-CTTTTCGAT-CTCTCACCGCCGCCTCTTCT 267
Query 203 CTCCCGGACAAGCGTCTCCTCAATTCTCTCATCACCCACTTGTCCTCCTTCCACAACACA 262
|||||||| ||||||||| |||||||||| || ||||| |||||| | || || | |
Sbjct 268 CTCCCGGAGAAGCGTCTCATCAATTCTCTTATTACCCATTTGTCC-AATACC-GAAGAAA 325
Query 263 --GATCAAAACACCTCCCTCAGGCACAGACTCAAGCGTGCCTTTGTTTCCAC-GACTTAT 319
| | |||||| || || |||||||||||||| || |||| |||| | | |||||
Sbjct 326 GCGGTGAAAACA-CT---GCA--CACAGACTCAAGCGAGCTTTTGCTTCCGCTG-CTTAT 378
Query 320 GTAATCGAGAAAGATCCGATTTTGCTTGAGTTTGAGACCGTCCGTACGGTTCTCGAGTCG 379
||||| |||||||||||||||||||||||||||||||| || |||||| || | ||||||
Sbjct 379 GTAATAGAGAAAGATCCGATTTTGCTTGAGTTTGAGACTGTTCGTACGCTTATGGAGTCG 438
Query 380 ATGAAACTAGCGAAAGCTTCCGGGCCAGCATTGGCTTTGGTGGAGTGTATGTTTAAAAAC 439
|||||||| ||||||||| | |||||||| |||||||| ||| |||||||||||||||||
Sbjct 439 ATGAAACTTGCGAAAGCTGCAGGGCCAGCGTTGGCTTTAGTGAAGTGTATGTTTAAAAAC 498
Query 440 AGGTACTTTGTTCCTTTTGATCTCTGGGGGGATTT-ACTTATCGATGTCTGTCGTGAAAA 498
|||||||||||||||||||||||||||||| |||| | |||||||| ||||| | |||||
Sbjct 499 AGGTACTTTGTTCCTTTTGATCTCTGGGGGCATTTGA-TTATCGATATCTGTAGAGAAAA 557
Query 499 TGGAAGCTTGGCTGCGTTTCTTAAGGTGTTTAGGGAAAGTTGTAGAATTGCAGTAGATGA 558
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 558 TGGAAGCTTGGCTGCGTTTCTTAAGGTGTTTAAGGAAAGTTGTAGAATTGCAGTAGATGA 617
Query 559 GAAGCTTGATTTTATGAAACCGGATTTGGTAGCGAGTAATGCAGCTCTTGAAGCGTGTTG 618
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 618 GAAGCTTGATTTTATGAAACCGGATTTGGTAGCTAGTAATGCGGCTCTTGAAGCGTGTTG 677
Query 619 TAGGCAGATGGAATCTTTGGCTGATGCTGAGAATCTGATTGAATCTATGGATGTTTTAGG 678
| ||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||| ||
Sbjct 678 TCGGCAGTTGGAATCTTTGGCTGATGCTGAAAATGTGATTGAATCTATGGCTGTTTTGGG 737
Query 679 TGTGAAGCCTGATGAATTGAGCTTTGGGTTTCTTGCTTATTTGTATGCGAGGAAGGGGCT 738
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 738 TGTGAAGCCTGATGAATTGAGCTTTGGGTTTCTTGCTTATTTGTATGCGAGTAAGGGGCT 797
Query 739 TCGAGAGAAGATTAGTGAGCTTGAGGATTTGATGGATGGTTTAGGGTTTGCAAGTAGAAG 798
|||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 798 TCGAGAGAAGATAAGTGAGCTTGAGAATTTGATGGATGGTTTTGGGTTTGCAAGTAGAAG 857
Query 799 AATTCTTTATTCCAGTATGATCAGTGGATATGTTAAGAGTGGTGATTTAGATAGTGCTTC 858
||| |||||||||| |||||| ||||| |||||||| ||| ||||||||||||||| |||
Sbjct 858 AATACTTTATTCCAATATGATTAGTGGGTATGTTAAAAGTAGTGATTTAGATAGTGTTTC 917
Query 859 TGATGTTATACTGTGTAGTCTTAAAGGAGTTGGAGAA-GCCTCGAGTTTCAGTGAGGAAA 917
||||||||||||| ||||||||||| || ||| ||| | ||| ||||| |||||||||
Sbjct 918 TGATGTTATACTGCATAGTCTTAAAGAAGATGG-GAAAGAATCGGGTTTCGGTGAGGAAA 976
Query 918 CGTACTGTGAATTGGTTAGAGGGTTCATAGAGAGTAAAAGCGTTGAGAGTTTAGCGAAAC 977
|||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||
Sbjct 977 CGTACTGTGAATTGGTTAAAGGGTTTATAGAGAGTAAAAGCGTTAAGAGTTTAGCGAAAG 1036
Query 978 TGATCATCGAAGCTCAGAAGTTGGAATCTATGT-CCACTGATGTTGGCGGATCAGTGGGG 1036
|||| |||||||||||||||||||||||| | | ||| ||||| || | | ||||| |||
Sbjct 1037 TGATAATCGAAGCTCAGAAGTTGGAATCT-TCTTCCATTGATGCTGACAGTTCAGTTGGG 1095
Query 1037 TTTGGAATCGTAAATGCTTGTGTCAAGCTCGGATTTTCGGGTAAA--A----GTATTCTC 1090
||||||||| | ||||||||||| || || ||||| |||| |||| | |||||||
Sbjct 1096 TTTGGAATCATTAATGCTTGTGTTAATCTTGGATTCTCGGATAAAGCACATAGTATTCTT 1155
Query 1091 GATGAATTGAATGCTCA-GG-G-AGGATCTG-GAGGGATTGGTG-TGTATGTGCCGATCT 1145
|| ||| ||| |||||| || | |||||||| | |||||||| | | |||||||| ||||
Sbjct 1156 GAGGAAATGATTGCTCAAGGAGGAGGATCTGTG-GGGATTGGGGCT-TATGTGCCAATCT 1213
Query 1146 TGAAGGCTTATTGCAAAGAAGG-CAGAACATCTGAAGCTACTCAGCTTGTTACAGAGATC 1204
|||| |||||||||||||| | ||||||| |||||||||||||||| ||||||||||||
Sbjct 1214 TGAAAGCTTATTGCAAAGA-GTACAGAACAGCTGAAGCTACTCAGCTGGTTACAGAGATC 1272
Query 1205 AGCAGCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACTATGATCGAAGCTTCCATG 1264
| ||||||||||||||||||||| || |||| ||||||| || |||||||||||||||||
Sbjct 1273 AACAGCTCTGGGCTTCAATTAGATGTCGAGATCTATAACGCTTTGATCGAAGCTTCCATG 1332
Query 1265 ACGAAACATGATTTCCTATCTGC-TCTTACATTGTTTAGGGATATGAGAGAAACAAGAGT 1323
||||| || |||||| ||||||| | ||||||| ||||||||||||||||||||||||||
Sbjct 1333 ACGAACCAGGATTTCATATCTGCGT-TTACATTATTTAGGGATATGAGAGAAACAAGAGT 1391
Query 1324 GGCGGATCTGAAAAG-ATGCTACTTAACAATAATGACTGGTCTCCTTGAGAATCAGAGAC 1382
|| |||| ||||| | | ||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1392 GGGGGATTTGAAAGGGA-GCTACTTAACAATAATGACAGGTCTCCTTGAGAACCAGAGAC 1450
Query 1383 CTGAGTTAATGGCAGAGTTTGTGGAGGAAGTTATGGAAGATCCACGCGTAGAAGTGAAGT 1442
||||||||||||||| |||| | || |||||| | ||||| ||||| || ||||| || |
Sbjct 1451 CTGAGTTAATGGCAGCGTTTCTAGACGAAGTTGTCGAAGACCCACGTGTCGAAGTAAATT 1510
Query 1443 CCCATGATTGGAATTCGATTATCCATGCCTTTTGTAAATCTGGTCGCCTAGGA-GATGCA 1501
|||||||||||||||||||||| ||||| || ||||||||||| || || ||| ||||||
Sbjct 1511 CCCATGATTGGAATTCGATTATTCATGCGTTCTGTAAATCTGGGCGTCT-GGAAGATGCA 1569
Query 1502 AAGAGTACATTCAGAAGGATGACTTTCCTTCAG-TATGAGCCGAATAACCAGACATACTT 1560
| ||| ||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||
Sbjct 1570 AGGAGGACATTCAGAAGGATGGTTTTCCT-CAGGTATGAGCCGAACAACCAGACATACTT 1628
Query 1561 GTCGTTGATCAATGGATACGTGAGCTGCGAGAAGTACTTCGAGGTGGTGGT-TA-T--AT 1616
|| ||||| |||||||| |||||| |||| ||||||||| | || || | | | |
Sbjct 1629 ATCCTTGATTAATGGATATGTGAGCGGCGAAAAGTACTTCAACGTCCTGCTCTTGTGGAA 1688
Query 1617 -G-GA--AA-G--A-G-T-TCAA--A-G-A--CA-AGAA-AG--CAAAACTGGAGCATGC 1656
| || || | | | | || | | | || |||| || | ||||| || |||||
Sbjct 1689 CGAGATTAAAGGTAAGATATCGTCGATGGAGGCAGAGAAGAGGTCCAAACTAGACCATGC 1748
Query 1657 TCTTG-CGGATGCGTTCTTGAATGCATTGGTCAAAGGAGGCTTCTTTG--GCACGGCGTT 1713
||| | || ||||||||||| | |||||||| |||||||| ||||||| ||| | || |
Sbjct 1749 TCTAGTCG-ATGCGTTCTTGTACGCATTGGTGAAAGGAGGGTTCTTTGATGCA-G-CGAT 1805
Query 1714 GCAAGTGATAGAGAAATGTCAGGAGATGAAGATATTCGTGGATAAGTGGAGGTATAAAGC 1773
||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1806 GCAAGTGGTAGAGAAATCTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTATAA-GC 1864
Query 1774 AA-CGTTCATGGAGACTCAAAAGAATCTCAGATTGCCAAAGTTGAGGAAGAGGAAG-ATG 1831
|| | |||||||||||||| ||||| || |||||||||||| ||||||||||||| |
Sbjct 1865 AAGCATTCATGGAGACTCACAAGAAACTTAGATTGCCAAAGCTGAGGAAGAGGAACTAC- 1923
Query 1832 AAGAAAATTGAGTTTCTTGATGCCTTTAAGAATTGGGCT 1870
|||||||| || | ||||| |||||| ||||| ||||||
Sbjct 1924 AAGAAAATGGAATCTCTTGTTGCCTTCAAGAACTGGGCT 1962
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76447121715
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5