BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G70060.1
Length=4483
Score E
Sequences producing significant alignments: (Bits) Value
Ahg476130 jgi|Araly1|476130|fgenesh2_kg.2__1260__AT1G70060.1 2564 0.0
Ahg472680 jgi|Araly1|472680|fgenesh2_kg.1__2634__AT1G24190.1 1256 0.0
Ahg912174 jgi|Araly1|912174|Al_scaffold_0001_2428 337 5e-91
> Ahg476130 jgi|Araly1|476130|fgenesh2_kg.2__1260__AT1G70060.1
Length=4444
Score = 2564 bits (1388), Expect = 0.0
Identities = 1688/1824 (93%), Gaps = 56/1824 (3%)
Strand=Plus/Plus
Query 2693 GGGCTTAGCAATAGTAATCCAAAACC---TGCATTAACCAGTGGAACGGAGGAGTTGAAG 2749
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2641 GGGCTTAGCAATAGTAATCCAAAACCTAGTGCATTAACCAGTGGAACGGAGGAGTTGAAG 2700
Query 2750 CCAAATTACGTAAATGGGCCACGCGTAGAGATTGGCGACAACCCTGTAATTCCAAATGGG 2809
|| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2701 CCGAATCACGTAAATGGGCCACGCGTAGAGATTGGCGACAACCGAGTAATTCCAAATGGG 2760
Query 2810 ACAGTAGCAGAATGGTTCGCTGGGGAAGCCAAAGTCGAAAGAGAGGAGGGTGAACTTTCT 2869
||| | |||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2761 ACATTGGCAGAAGGGTTCGCTGGGGAAACCAAAGTCGAAAGAGAGGAGGGTGAACTTTCT 2820
Query 2870 CCAACAGGAGATTTTGAAGAAGATAATTATGCAGTTCATGGAGAGAATGACATGGAGGCT 2929
||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 2821 CCAACAGGAGAGTTTGAGGAAGATAATTTTGCAGTTCATGGAGAGAATGACATGGAGGCT 2880
Query 2930 CTCAGCAAAAGTAAGGAGAATGATGCAACTGC-----A-G-A--TGATGCAAGTGCTCCA 2980
|||||||||||||||||||||||||| ||||| | | | ||||||||||||||||
Sbjct 2881 CTCAGCAAAAGTAAGGAGAATGATGCTACTGCAGATGATGAAGGTGATGCAAGTGCTCCA 2940
Query 2981 AGATCATCAGATGGTAGCGGAAACACATCTCACAACGGTGATGTTTCTGGAACTGACTCT 3040
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2941 AGATCATCAGATGGCAGCGGAAACACATCTCAGAACGGTGATGTTTCTGGAACTGACTCT 3000
Query 3041 GGTGATGGTGAAGATTGTTATCGCGAAGATGATATAGACCATAATAAGGTAGAAAGTGAA 3100
||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||
Sbjct 3001 GGTGATGGTGAAGATTGTTATCGCGAAGATGATATGGACCATAATAAGGCAGAAAGCGAA 3060
Query 3101 GGTGAGGCTGAAGAAGGTATGTCTGATGGCCATGATGATACTGAAGGAGATATGCCTGTG 3160
|||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||
Sbjct 3061 GGTGAGGCTGAAGAAGGTATGTCTGATGCCCAGGATGATACTGAAGGAGATAGGCCTGTG 3120
Query 3161 TTGTCCATCTCAGTAAAAAACCTGCTACATGTGAAACCTCTTGCAAAGTATG-TCCCTCC 3219
|||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 3121 TTGTCCATTTCAGTAAAAAACCTGCTACATGTGAAACCTCTTGCAAAGTATGAT-CCTCC 3179
Query 3220 AGCTTTGTACGATAAGGACAACGATGATTCTCGGAAGAACTCACAAGTCTTTTATGGGAA 3279
||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 3180 AGCTTTGCGCGATAAGGACAAAGATGATTCTCGGAAGAACTCTCAAGTCTTTTATGGGAA 3239
Query 3280 TGATTCTTTTTATGTTCTATTCAGGCTTCATCAGATTTTGTATGACAGAATATTATCAGC 3339
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3240 TGATTCTTTCTATGTTCTTTTCAGGCTTCATCAGATTTTGTATGACAGAATATTATCAGC 3299
Query 3340 AAAAATCAATTCATCATCTCCAGATAGAAAGTGGAAGACCTCAAATCCAACAAACCCCGC 3399
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3300 AAAAGTCAATTCATCATCTCCAGATAGAAAGTGGAAGACCTCAAATCCAACAAACCCCGC 3359
Query 3400 TGATTCGTACGCCAGAATCATGGATGCTCTCTACAATTTGCTCGATGGCACATCCGATAA 3459
||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct 3360 TGATTCGTACGCCAGCATTATGGATGCTCTCTACAATTTGCTCGATGGTACATCCGATAA 3419
Query 3460 TTCAAAGTTCGAAGATGATTGCCGAGCAATTATCGGGACCCAGTCATATGTTCTCTTCAC 3519
||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 3420 TTCGAAGTTTGAAGATGATTGCCGAGCAATTATTGGGACACAGTCATATGTTCTCTTCAC 3479
Query 3520 ATTAGACAAACTGATCTATAAGCTCATCAAGCATCTCCAAGCAGTAGCAGCTGATGAGAT 3579
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 3480 ATTAGACAAACTGATCTACAAGCTCATCAAGCATCTCCAAGGAGTAGCAGCTGATGAGAT 3539
Query 3580 GGACAACAAATTACAACAGCTT-TATGCTTATGAGAAATCCAGAAAGCCTGAGAAGTTTC 3638
| ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||
Sbjct 3540 GTACAACAAATTACAACAG-TTATATGCTTACGAGAAATCCAGAAAGCCTGAAAAGTTTC 3598
Query 3639 TGGATGCTGTTTATTACGAAAATGCTCTTGTGCTTCTTCCCGATGAGGATATATACCGCA 3698
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3599 TCGATGCTGTTTATTACGAAAATGCTCGTGTGCTTCTTCCCGATGAGGATATATACCGCA 3658
Query 3699 TTGAATGTGAACAATCGACACCAAGCAAACTCTCTATTCAGCTTCTGGACTATGGACATG 3758
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3659 TTGAATGTGAACTATCGACACCAAGCAAACTCTCTATTCAGCTTCTGGACTATGGACATG 3718
Query 3759 ATAAGCCTGATGTGACATCCATATCCATGGACCCAACTTTTGCAGCTTACCTCCACAATG 3818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3719 ATAAGCCTGATGTGACATCCATATCCATGGACCCAACTTTTGCAGCTTACCTCCACAATG 3778
Query 3819 TATTCCTTTCTTATCAACCTAATGCGAAAGAGAATCCTCGAATCTATTTGAAACGGAATA 3878
|||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 3779 TATTCCTTTCCTATCAACCTAATGCAAAAGAGAATCCCCGAATCTATTTGAAACGGAATA 3838
Query 3879 AGCGTAAAAATGGTGGTGACGATGAACTCTGCACCACGGATGAAGTTAAGATTATTAATG 3938
||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |
Sbjct 3839 AGCGTAAAAATGGTGGTGACGATGAACTCTGCACCACAGATGGAGTTAAGATTATTAACG 3898
Query 3939 GTTTGGAATGTAAGATAACCTGCAGTTCTTCAAAGGTCTCCTATGTATTAGACACCGAGG 3998
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3899 GTTTGGAATGTAAGATAACCTGCAGTTCTTCAAAGGTCTCCTATGTATTAGACACAGAGG 3958
Query 3999 ATGTGTTGCATCGTGCTAAGAGGAGGAAACTTTTAAACCAAAGCGGTTTACCCCTC-GCA 4057
||||||| |||||| |||||||||||||| |||| ||||||||||||||||| ||| | |
Sbjct 3959 ATGTGTTACATCGTTCTAAGAGGAGGAAATTTTTGAACCAAAGCGGTTTACCACTCAG-A 4017
Query 4058 CATGATTCTGTTTGCAGTGGTTCTTTAATTAGGCAAAGGAGAACACAAAGATATCAAAAA 4117
|| |||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||
Sbjct 4018 CAGGATTCTGTTTGCAGTGGTTCTTTAATCAGGCAAAGGAGAATACAAAGATACCAAAAA 4077
Query 4118 CTTCTCACCGGTCAATGACATCTGTCACTTACTACCAGAAAACGCTCGGGAATAGAGCAA 4177
|||||||| || |||| |||||| ||| ||| ||||| |||| ||||||||||||||||
Sbjct 4078 CTTCTCACTGGCCAATAACATCT--CACCTACCACCAGCAAACACTCGGGAATAGAGCAA 4135
Query 4178 CTTCGCACT-TTTTGAGAGATAAAA-GGTTGCCATACTCAGCATTGAGCTTTGTCAGAAG 4235
| ||||||| ||||| |||| |||| |||||||||||||||| |||||||||||||||||
Sbjct 4136 CGTCGCACTCTTTTG-GAGACAAAAAGGTTGCCATACTCAGCGTTGAGCTTTGTCAGAAG 4194
Query 4236 AGAAGAAATGTAAGATGGCTCTTACTT-CT-GT-T-ACTGCCTCTGGTCCCTGTTGTATT 4291
||| |||||||||||||||||||| || || || | |||||||||||||||||||||||
Sbjct 4195 AGAGGAAATGTAAGATGGCTCTTAATTACTTGTGTTACTGCCTCTGGTCCCTGTTGTATC 4254
Query 4292 CTCACAGAAAATAAAAAGGGAGGGAGGGGGAAAATCGAAGGAATACTAAACGGATTAACT 4351
||||||||||||||||||||||||||||| || ||||||||| | ||| | |
Sbjct 4255 CTCACAGAAAATAAAAAGGGAGGGAGGGG-AAGATCGAAGGA-T--TAA-C---T----- 4301
Query 4352 GCCCAAGCCTTGAAGTCTTGTTTCCCAT--T-GTGTATATAAGCATTTTGTATGTTGT-- 4406
||||||||||| |||||||||||||||| | ||||| |||| | |||||||||||||
Sbjct 4302 GCCCAAGCCTTCAAGTCTTGTTTCCCATAATTGTGTACATAAACTTTTTGTATGTTGTTG 4361
Query 4407 -AACATTAATTAA---AA-TTTCTTCTTTGTTG-CTCCTATTCTTTCCAACATTAATCAT 4460
||||||| |||| || ||||||||||||| ||||||||||||||||||||||||||
Sbjct 4362 TAACATTA-TTAACTCAAATTTCTTCTTTGTTAACTCCTATTCTTTCCAACATTAATCAT 4420
Query 4461 -C---TGAATGAAAAATTTGTTCT 4480
| | |||||| ||||||||||
Sbjct 4421 GCACCTCAATGAAGAATTTGTTCT 4444
Score = 2242 bits (1214), Expect = 0.0
Identities = 1348/1411 (96%), Gaps = 16/1411 (1%)
Strand=Plus/Plus
Query 1286 GTGTCTA-AGAAATCCTTGTGGAGTGAAGGCAAATGTCCTCAACCTACTAAGTCACTTGA 1344
||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1204 GTGACTATAG-AATCCTTGTGGAGTGAAGGCAAATGTCCTCAACCTACTAAGTCACAGGA 1262
Query 1345 CAAAGATACAGACCGAGAACGTGAGAAGATTGAAAGGTATAGAGAAAGAGACCGTGAGAA 1404
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1263 CAAAGATACAGACCGAGAACGTGAAAAGATTGAAAGGTATAGAGAAAGAGACCGCGAGAA 1322
Query 1405 GGAGAGGCTTGAAAAGGTGGCAGCGAGTCAGAAATGGGCTAAACCTATCAGTGAACTAGA 1464
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 1323 GGAGAGGCTTGAAAAGGCGGCAGCGAGTCAGAAATGGGCTAAACCTATCAGTGAGCTAGA 1382
Query 1465 TCTCTCGAACTGTGAACAGTGCACACCTAGTTATCGGAGACTTCCAAAGAATTATCCAAT 1524
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 1383 TCTCTCGAACTGTGAACAGTGTACACCTAGTTATCGGCGACTTCCAAAGAATTATCCAAT 1442
Query 1525 TCCTATAGCAAGCCAAAAAATGGAGATTGGTAGCCAAGTGCTTAATGATCATTGGGTCTC 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 TCCTATAGCAAGCCAAAAAATGGAGATTGGTAGCCAAGTGCTTAATGATCATTGGGTCTC 1502
Query 1585 TGTCACTTCAGGAAGTGAAGACTATTCATTCAAACACATGCGCAAGAACCAATACGAAGA 1644
|||||||||||||| ||||| |||||||| ||||||||||| |||||||| || |||||
Sbjct 1503 CGTCACTTCAGGAAGCGAAGATTATTCATTTAAACACATGCGTAAGAACCAGTATGAAGA 1562
Query 1645 GAGCCTATTCAAATGTGAAGATGACAGGTTCGAGCTAGACATGTTATTAGAGTCTGTGAT 1704
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1563 GAGCCTATTCAAATGTGAAGATGACAGGTTTGAGCTAGACATGTTATTAGAGTCTGTGAT 1622
Query 1705 CTCGGCTACTAATCGAGTTGAAGAGTTATTGGCAAAGATTAACAGTAATGAATTGAAAAC 1764
||| ||||| ||| |||| |||||||||||| | ||||||||||||||||||||||||||
Sbjct 1623 CTCTGCTACGAATAGAGTGGAAGAGTTATTGTCTAAGATTAACAGTAATGAATTGAAAAC 1682
Query 1765 CGATACTCCCATCTGTATCGAGGATCACCTCACAGCTCTAAACCTAAGATGCATAGAACG 1824
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1683 CGACACTCCCATCTGCATCGAGGATCACCTCACAGCTCTAAACCTAAGATGCATAGAACG 1742
Query 1825 GTTATACAGTGACCATGGGCTCGATGTGTTGGATTTGTTAAAGAAGAATGCATATCTTGC 1884
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1743 GTTATATGGTGACCACGGGCTCGATGTGTTGGATTTGTTAAAGAAGAATGCATATCTTGC 1802
Query 1885 TTTACCGGTAATACTAACCCGTTTGAAACAAAAGCAAGAAGAATGGGCAAGGTGTCGTAC 1944
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1803 TTTACCGGTAATACTAACCCGTTTGAAACAAAAGCAAGAAGAGTGGGCAAGGTGTCGTAC 1862
Query 1945 TGAGTTTAACAAAGTCTGGGCTGACATATATACAAAGAACTACCACAGGTCGCTTGATCA 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1863 TGAGTTTAACAAAGTCTGGGCTGACATATATACAAAGAACTACCACAGGTCGCTTGATCA 1922
Query 2005 TCGCAGTTTTTATTTCAAACAGCAGGATTCAAAGAATCTGAGCACAAAAGCATTGCTGGC 2064
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1923 TCGCAGTTTTTATTTCAAACAGCAGGATTCAAAGAATCTGAGTACAAAAGCATTGCTGGC 1982
Query 2065 AGAGATAAAAGAGATCTCTGAAAAGAAGCGAGGCGAAGATGATGCACTTCTTGCTCTTGC 2124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1983 AGAGATAAAAGAGATCTCTGAAAAGAAGCGAGGCGAAGATGATGCACTTCTTGCTCTTGC 2042
Query 2125 GGCTGGAAATAGACGAACTATTTCTTCCAATATGAGTTTTGATTATCCGGATCCTGATCT 2184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2043 GGCTGGAAATAGACGAACCATTTCTTCCAATATGAGTTTTGATTATCCGGATCCTGATCT 2102
Query 2185 TCACGAAGATCTGTATCAGCTGATCAAGTATTCATGTGGAGAAATGTGTTCAACAGAACA 2244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2103 TCACGAAGATTTGTATCAGCTGATCAAGTATTCATGTGGAGAAATGTGTTCAACAGAACA 2162
Query 2245 GTTAGATAAGGTAATGAAGGTATGGACAGAATTTTTGGAACCAATATTTGGTGTTCCTTC 2304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2163 GTTAGATAAGGTAATGAAGGTATGGACAGAATTTTTGGAACCAATATTTGGTGTTCCTTC 2222
Query 2305 TCGCCCTCAAGGTGCCGAAGACCGAGAAGATGCTGTCAAGTCTACAAACCATGACCGAGA 2364
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2223 TCGCCCTCAAGGTGCCGAAGACCGAGAAGATGCTGTCAAGTCTACGAACCAAGACCGAGA 2282
Query 2365 AGACCAAGAAGATGCTGTCAGTCCTCAAAATGGAGCTAGTATTGCCAACTCTATGCGGTC 2424
||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2283 AGA---------TGCTGTCAGTCCTCAAAATGGAGCTAGTATTGCCAACTCTATGCGTTC 2333
Query 2425 AAATGGCCCTCGAAAAGTCAATGAAAGTAATCAAGTGCGGCAAGCTAGTGAGTTGGATAA 2484
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2334 AAATGGCCCTCGAAAAGGAAATGAAAGTAATCAAGTGCGGCAAGCTAGTGAGTTGGATAA 2393
Query 2485 AGATGTTACTTCTAGTAAGACCTCAGATGCCTTGTTATCATGTGACAACA-C--TCAGAA 2541
|||||| ||||||||||| |||||||||| ||| |||||||||||||||| | ||||||
Sbjct 2394 AGATGTCACTTCTAGTAAAACCTCAGATGTCTTATTATCATGTGACAACAACACTCAGAA 2453
Query 2542 TGATAAAATGCCGAAGAATCTGACCACACCTGACGAAAGAGCCG-AAACCAAACAAGCTG 2600
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 2454 TGATAAAATGCCGAAGAATCTGACCACACCTGACGAAAGA-CCGGAAACCAAACAAGCTG 2512
Query 2601 TTTCTATTGAACGTGCCCATAACTCAAATGCACTACCTCTGGATGGATTGTTACCTCAAA 2660
||||||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||
Sbjct 2513 TTTCTATTGAATGTGCCCACAACTCAAATGCACTGCCTGTGGATGGATTGTTACCTCAAA 2572
Query 2661 GGAATGGAAAAATCAGCAGTTTATCCGTTGC 2691
|||||||||||||||||| ||||||| ||||
Sbjct 2573 GGAATGGAAAAATCAGCAATTTATCCATTGC 2603
Score = 1692 bits (916), Expect = 0.0
Identities = 1088/1167 (93%), Gaps = 28/1167 (2%)
Strand=Plus/Plus
Query 155 ATGGTTGGAGGAAGTAGTGCACAGAAGCTAACTACAAATGATGCACTTGCATATCTTAAA 214
||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct 1 ATGGTTGGAGGAAGTAGTGTGCAGAAGCTAACTACTAATGATGCACTTGCGTATCTTAAG 60
Query 215 GCTGTCAAGGATAAATTTCAAGATAAACGTGACAAATACGATGAGTTTCTTGAGGTTATG 274
||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 61 GCTGTGAAGGATAAGTTTCAAGATAAACGTGATAAATACGATGAGTTTCTTGAGGTTATG 120
Query 275 AAAGATTTTAAAGCTCAGAGAGTTGATACTACTGGTGTTATCTTAAGGGTGAAAGAACTT 334
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AAAGATTTTAAAGCTCAGAGAGTTGATACTACTGGTGTTATCTTAAGGGTGAAAGAACTA 180
Query 335 TTTAAAGGGAACAGAGAATTGATTTTGGGGTTTAATACTTTCTTACCAAAGGGTTTCGAG 394
|| || |||||||| ||| ||||||||||||| ||||||||||| |||||||||||||||
Sbjct 181 TTCAAGGGGAACAGGGAACTGATTTTGGGGTTCAATACTTTCTTGCCAAAGGGTTTCGAG 240
Query 395 ATAACTCTCCGACCCGAGGATGACCAACCCGCTGCACCAAAGAAGCCTGTTGAGTTTGAG 454
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 241 ATAACTCTCCGACCCGAGGATGACCAACCTGCTGCGCCAAAGAAGCCTGTTGAGTTTGAG 300
Query 455 GAAGCTATTAGTTTTGTTAACAAGATTAAGACAAGGTTTCAAGGCGATGATCGTGTATAC 514
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GAAGCTATTAGTTTTGTCAACAAGATTAAGACAAGGTTTCAAGGCGATGATCGTGTATAC 360
Query 515 AAATCGTTTTTAGACATTTTGAACATGTATAGAAAGGAAAACAAGTCTATTACTGAGGTC 574
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 361 AAATCGTTTTTAGACATTTTAAACATGTATAGAAAGGAAAACAAGTCCATTACTGAGGTC 420
Query 575 TACCATGAGGTGGCTATCCTTTTTCGGGACCATCACGATTTGCTTG-GAGAGTTCACTCA 633
|| || |||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 421 TATCAAGAGGTGGCTATCCTTTTTCGGGACCATCACGATTTGCTTGTG-GAGTTCACTCA 479
Query 634 CTTTCTCCCTGATACTTCAGCAACTGCATCTACTAATGATTCTGTAAAAGTTCCAGTACG 693
||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct 480 CTTTCTCCCTGATACTTCAGCAACTGCATCTACTAATGATTCTCTAAAAATGCCAGTACG 539
Query 694 TGATAGAGGCATTAAGTCTCTTCCCACCATGCGTCAAATAGATCTTGATAAGAAGGACCG 753
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 540 TGATAGAGGCATTAAGTCTCTTCCCAACATGCGTCAAATAGATCTTGATAAGAAGGACCG 599
Query 754 GATTATTACTTCGCATCCTAACCGTGCCCTCAAAACCGAAAATATGGACGTAGACCATGA 813
|||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 600 GATTATTACTTCGCTTCCTGACCGTGCCCTCAAAACCGAACATATGGACGTAGACCATGA 659
Query 814 GAGGTCTTTGTTGAAAGATAGTAAAGAAGAAGTGAGACGCATTGACAAAAAGAATGATTT 873
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 660 GAGATCTTTGTTGAAAGATAGTAAAGAAGAAGTGAGACGCATTGACAAAAGGAATGATTA 719
Query 874 CATGGATGATAGAGACAGGAAAGATTACAGAGGTCTTGACCACGATAGCCATAAAGAACA 933
||||||||| ||||| |||||||||||| |||||||||| || |||||||||||||| ||
Sbjct 720 CATGGATGACAGAGATAGGAAAGATTACCGAGGTCTTGAACATGATAGCCATAAAGAGCA 779
Query 934 TTTCTTCAACAGCAAAAAGAAATTGATACGTAA-GGATGATGATTCTGCTGAAATGTCAG 992
||||||||||| ||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct 780 TTTCTTCAACAACAAAAAGAAATTGATTC-TAAAGGATGATGATTCTGCTGAAATGTCAA 838
Query 993 ATCAAGCCAGGGAAGGAGACAAGTTTTCTGGAGCCATTCCGAGTTCATCTACTTATGATG 1052
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 839 ATCAAGCTAGGGAAGGAGACAAGTTTTCTGGAGCCATTCCCAGTTCATCTACTTATGATG 898
Query 1053 AAAAAGGT-C-A-T----A-G------C----CA-AG--AA---CTTGCTTTTGTTGATA 1088
|||||||| | | | | | | || || || ||||||||||||||||
Sbjct 899 AAAAAGGTGCTACTCTTTATGTGATGACAGGTCATAGCCAAGAACTTGCTTTTGTTGATA 958
Query 1089 GAGTGAAGGCAAAGCTTGATACCGCGGATAACCAAGAGTTCTTACGATGTCTTAATCTCT 1148
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 959 GAGTGAAGGCAAAGCTTGATACCGCGGAAAACCAGGAGTTCTTACGATGTCTTAATCTCT 1018
Query 1149 ATTCAAAGGAGATAATCAGCCAACCAGAATTGCAGTCTTTGGTGAGTGATTTAATTGGTG 1208
|||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| |
Sbjct 1019 ATTCAAAGGAGATAATCAGCCAGCCAGAATTGCAATCTTTGGTGAGCGATTTAATTGGAG 1078
Query 1209 TATATCCAGACCTTATGGACGCCTTCAAAGTCTTTTTGGCTCAGTGTGACAAGAATGATG 1268
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1079 TATATCCAGACCTTATGGACGCCTTCAGAGTTTTTTTGGCTCAGTGTGACAAGAATGATG 1138
Query 1269 GATTACTCTCTGGTATCGTGTCTAAGA 1295
|||||||||||||||||||||||||||
Sbjct 1139 GATTACTCTCTGGTATCGTGTCTAAGA 1165
> Ahg472680 jgi|Araly1|472680|fgenesh2_kg.1__2634__AT1G24190.1
Length=4277
Score = 1256 bits (680), Expect = 0.0
Identities = 1637/2079 (79%), Gaps = 145/2079 (7%)
Strand=Plus/Plus
Query 917 GATAGCCATAAAGAACA-TTTCTTCAAC-AGCAAAAAG-AAATTGATACGTA-AGGATGA 972
|||||| | ||||| || |||| ||||| || || || |||| ||| || ||| |
Sbjct 747 GATAGCAAAAAAGAGCAGTTTC-TCAACAAG-AAGCAGAAAATACATA-TTAGAGG-CGG 802
Query 973 TGATTCTGCTGAAATGT-CAGATCAAGCCAGGGAA-GGAGACAAGTTTTCTGGAGCCATT 1030
||||| ||||||||| | || |||||| ||||||| ||| | || |||| |||||| ||
Sbjct 803 TGATTTTGCTGAAATTTCCA-ATCAAGTCAGGGAAGGGA-ATAAATTTTTTGGAGCGGTT 860
Query 1031 CCGAGTTCATCTACTTATGATGAAAAAGGT--CAT----AG---C---CAAGAACTTGCT 1078
|| ||||||||||||||||||||||||||| ||| || | ||||| || |||
Sbjct 861 CCTAGTTCATCTACTTATGATGAAAAAGGTGCCATGAAAAGTTACAGTCAAGATCTAGCT 920
Query 1079 TTTGTTGATAGAGTGAAGGCAAAGCTTGATACCGCGGA-TAACCAAGAGTTCTTACGATG 1137
|||| |||||||| |||| ||||||| || | | || | |||| ||||| ||||| ||
Sbjct 921 ATTGTCGATAGAGTAAAGGGAAAGCTTAATGCATCCGAGT-ACCAGGAGTTTTTACGTTG 979
Query 1138 TCTTAATCTCTATTC-AAAGGAGATAATCAGCCAACCAGAATTGCAGTCTTTGGTGA-GT 1195
|||||||||| ||| ||| || |||||||||| |||||||||||| |||||||| | |
Sbjct 980 CCTTAATCTCTTTTCGAAA-GAAATAATCAGCCGACCAGAATTGCAATCTTTGGT-AGGA 1037
Query 1196 GATTTAATTGGTGTATATCCAGACCTTATGGACGCCTTCAAAGTCTTTTTGGCT-CAGTG 1254
|||||||||| |||||||| ||||| ||||| |||| | || ||||||| | || ||
Sbjct 1038 AATTTAATTGGAGTATATCCTGACCTCATGGATTCCTTTATAGAGTTTTTGG-TGCAATG 1096
Query 1255 TGACAAGAATGATGGATTACTCTCTGGTA-TCGTGTCTAAGAAATCCTTGTGGAGTGAAG 1313
|| |||| ||| ||| | |||||||||| || || ||||||||||||||||||||||||
Sbjct 1097 CGAAAAGACTGAAGGACTGCTCTCTGGTATTC-TGACTAAGAAATCCTTGTGGAGTGAAG 1155
Query 1314 GCAAATGTCCTCAACCTACTAAGTCACTTGACAAAGATACAGACCGAGAACGTGAGA-AG 1372
|||||| ||||||| | | | ||||| ||||| |||| ||||| ||||| | ||| ||
Sbjct 1156 GCAAATATCCTCAA-C--C--A-TCACTGGACAATGATAGAGACCAAGAACATAAGAGAG 1209
Query 1373 ATTGAAAGGTATAGAGAAAGAGACCGTGAGAAGGAGAGGCTTGAAAAGGTGGCAGCGAGT 1432
| ||| ||| |||||| ||||| | ||| ||||| ||||||||||| | || || | |
Sbjct 1210 A-TGACGGGTTTAGAGACAGAGATCATGATAAGGAAAGGCTTGAAAAAGCAGCTGCAAAT 1268
Query 1433 CAGAAATGGGCTAAA-CCTATCAGTGAACTAGATCTCTCGAACTGTGAACAGTGCACACC 1491
| ||||||||| ||| || |||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1269 CTGAAATGGGC-AAAGCCAATCAGTGAACTAGATCTCTCGAACTGTGAACAATGCACTCC 1327
Query 1492 TAGTTATCGGAGACTTCCAAAGAATTATCCAATTCCTATAGCAAGCCAAAAAATGGAGAT 1551
|||||||||| ||||||||||||||| |||||| |||| |||||||| || | ||| |
Sbjct 1328 TAGTTATCGGTTACTTCCAAAGAATTACCCAATTTCTATTGCAAGCCAGAAGACAGAGCT 1387
Query 1552 TGGTAGCCAAGTGCTTAATGATCATTGGGTCTCTGTCACTTCAGGAAGTGAAGACTATTC 1611
|||| | || ||||| ||||| |||||||| ||||| |||||||||||||| |||||
Sbjct 1388 CGGTAAACTGGTTCTTAACGATCACTGGGTCTCCGTCACATCAGGAAGTGAAGATTATTC 1447
Query 1612 ATTCAAACACATGCGCAAGAACCAATACGAAGAGAGCCTATTCAAATGTGAAGATGACAG 1671
||| | ||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 1448 ATTTAGCCACATGCGCAAGAACCAGTATGAAGAGAGCCTCTTCAAATGTGAAGATGACAG 1507
Query 1672 GTTCGAGCTAGACATGTTATTAGAGTCTGTG-ATCTCGGCTACTAATCGA-GTTGAAGAG 1729
||| |||||||| ||| |||||||||||||| || || |||| || | | || |||||
Sbjct 1508 GTTTGAGCTAGATATGCTATTAGAGTCTGTGAAT-TCAACTACAAAGC-ATGTGGAAGAA 1565
Query 1730 TTATTGGCAAAGATTAACAGTAATGAATTGAAAACCGATA-CTCCCATCTGTATCGAGGA 1788
||| ||||||||||||||||||||||| |||||||| | | | |||||| || |||||||
Sbjct 1566 TTACTGGCAAAGATTAACAGTAATGAACTGAAAACCAACAGC-CCCATCCGTGTCGAGGA 1624
Query 1789 TCACCTCACAGCTCTAAACCTAAGATGCATAGAACGGTTATACAGTGACCATGGGCTCGA 1848
|||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||||
Sbjct 1625 TCACCTCACAGCTCTAAACCTAAGATGCATAGAACGTTTATATGGTGATCACGGGCTCGA 1684
Query 1849 TGTGTTGGATTTGTTAAAGAAGAATGCATATCTTGCTTTACCGGTAATACTAACCCGTTT 1908
|||| ||||| ||||||||||||| | | |||||| ||||| || || ||||| |||||
Sbjct 1685 TGTGATGGATGTGTTAAAGAAGAACGTGTCTCTTGCATTACCTGTTATCCTAACACGTTT 1744
Query 1909 GAAACAAAAGCAAGAAGAATGGGCAAGGTGTCGTACTGAGTTTAACAAAGTCTGGGCTGA 1968
|||||| ||||||||||| ||||||||||||||| |||| ||| ||||||||||||||||
Sbjct 1745 GAAACAGAAGCAAGAAGAGTGGGCAAGGTGTCGTTCTGATTTTGACAAAGTCTGGGCTGA 1804
Query 1969 CATATATACAAAGAACTACCACAGGTCGCTTGATCATCGCAGTTTTTATTTCAAACAGCA 2028
||||||| | ||||| ||| ||| |||||||||||||| ||||| || |||||||||||
Sbjct 1805 CATATATGCTAAGAATTACTACAAATCGCTTGATCATCGAAGTTTCTACTTCAAACAGCA 1864
Query 2029 GGATTCAAAGAATCTGAGCACAAAAGCATTGCTGGCAGAGATAAAAGAGATCTCTGAAAA 2088
|||||| |||| ||| |||| ||||| ||| |||||||||||||||||||| |||||||
Sbjct 1865 GGATTCGAAGAGTCTCAGCATGAAAGCTTTGTTGGCAGAGATAAAAGAGATCACTGAAAA 1924
Query 2089 GAAGCGAGGCGAAGATGATGCACTTCTTGC-TCTTGCGGCTGGAAATAGACGAACTATTT 2147
|||||||| | |||||| |||||||||| | |||| || |||||||||| | | ||||
Sbjct 1925 GAAGCGAGA-G--GATGATTCACTTCTTGCAT-TTGCAGCCGGAAATAGACTATCCATTT 1980
Query 2148 CTTCCAA-TATG-AGTTTTGATTATCCGGATCCTGATCTTCACGAAGATCTGTATCAGCT 2205
| |||| | || ||||| ||||||||||||||||| || || |||||||| || |||||
Sbjct 1981 CC-CCAAATTTGGAGTTT-GATTATCCGGATCCTGACCTGCATGAAGATCTCTACCAGCT 2038
Query 2206 GATCAAGTATTCATGTGGAGAAATGTGTTCAACAGAACAGTTAGATAAGGTAATGAAGGT 2265
|||||| ||||| |||| ||||||||| || || |||||||||||||||||||||||| |
Sbjct 2039 GATCAAATATTCTTGTGCAGAAATGTGCTCTACTGAACAGTTAGATAAGGTAATGAAGAT 2098
Query 2266 ATGGACAGAATTTT-TGGAACCAATATTTGGTGTTCCTTCTCGCCCTCAAGGTGCCGAAG 2324
|||||| | || |||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 2099 TTGGACA-ACCTTCGTGGAACAAATATTTGGTGTTCCTTCTCGCCCTCAAGGTGCTGAAG 2157
Query 2325 ACCGAGAAGATGCTGTCAAGTCTACAAACCA---TG-AC----CG--AG---AAGACCAA 2371
||| |||||| | ||||||||| | |||||| || | || || ||| |
Sbjct 2158 ACCAAGAAGACGTTGTCAAGTCCATAAACCAGAATGTAAAAAGCGGTAGTTCAAGTGCTG 2217
Query 2372 GA-AGATGCT-GTCA-GTCCTCAAAATGGA-GCTAGTATTGCCAACTCTATG-CGGTCAA 2426
| ||| || | | ||||||| ||| | |||||| ||||| |||||| | || ||||
Sbjct 2218 GCGAGA-GCGAGGGAAGTCCTCACAATT-ACGCTAGTGTTGCCGACTCTA-GACGCTCAA 2274
Query 2427 ATGGCC-CTCGAAAAG-TCAATGAA-AGTAATCAAGT-GCGGCAAGCTAGTGAGTTGGAT 2482
|| | ||| ||||| | |||||| | |||||| || | ||||| ||||| | |||| |
Sbjct 2275 ATA-CATCTCAAAAAGCT-AATGAACA-TAATCA-GTTGGGGCAACCTAGTAATTTGG-T 2329
Query 2483 AAAGA-TGTTACTTCTAGTAAG-ACCTCAGATGCCTTGTTATCATGTGACAACACTCAGA 2540
| || || || || || || | ||||||||||| || || ||| | ||||
Sbjct 2330 GAGGAATGGCGCTGCT-GTTAGGATTTCAGATGCCTT---ATG-TGAGACTGC--TCAGC 2382
Query 2541 ATGATAAAATGCCGAAGAATCT-GACCACACCTGACGAAAGAGCC-GAAACCAAACAAGC 2598
|||| ||||||| ||||||| | | || ||| ||||| ||| |||| |||||||||
Sbjct 2383 ATGAGAAAATGCTGAAGAATGTAGTT-ACGTCTGGTGAAAG-GCCTGAAAGCAAACAAGC 2440
Query 2599 TGTTTCTATTGAACGTGCCCAT-AACTCAAATGCACTAC-CTCTGGATGGATTGTTAC-C 2655
|||||||||||| | || || || |||| ||| || | || |||||||||| ||| |
Sbjct 2441 TGTTTCTATTGAGCATGTACACGAA-TCAACTGCTCT-CGCTGTGGATGGATTATTAGAC 2498
Query 2656 TCAAAGGAATGGAAAAATCAGCAGTT-TATC-CGTTG-CGGGGCTTAGCAATAGTAATCC 2712
||||| |||||| || ||| | | || | | | | | |||| || ||||| |||||
Sbjct 2499 -CAAAGTAATGGAGGAAGCAGTA-TAGTA-CACAT-GACCGGGCATAACAATAATAATCT 2554
Query 2713 AAAACCTGCATTAACCAGTGGAACGGAG--G-AGTTGAAGCCAAATTACGTAAATGGGCC 2769
|| |||| | | || ||||||| ||| | |||||||| || | | |||||||||
Sbjct 2555 GAAGCCTG--TGA-CCTGTGGAACAGAGTTGGAGTTGAAGATGGATGATGGAAATGGGCC 2611
Query 2770 ACGCGTAGAGATTGGCGACAACCC-TGTAAT-TCCAAATGGGA-CA-G-TAG------CA 2818
| ||||| |||| |||| | || | || |||||||| | | ||| ||
Sbjct 2612 AAAATTAGAGGTTGGTAACAAGAGAT-TATTGTC-AAATGGGATCTCGGTAGAAATAACA 2669
Query 2819 -G-AAT---G-GTTCGCTGGGGAAG-CCAAAGTCGAAAGAGAGGAGGGTGAACTTTCTCC 2871
| || | ||| || ||| || ||||||| |||||||| || ||||||||||||||
Sbjct 2670 AGTAACCAAGAGTTGGCAGGG-AATTCCAAAGTTGAAAGAGAAGAAGGTGAACTTTCTCC 2728
Query 2872 -AACAGGAGATTTTGAAGAAGATAATTATGCAGTTCATG 2909
|| ||||| ||||| |||||||||| ||||||| |||
Sbjct 2729 CAAT-GGAGACTTTGAGGAAGATAATTTTGCAGTTTATG 2766
Score = 704 bits (381), Expect = 0.0
Identities = 841/1056 (80%), Gaps = 59/1056 (6%)
Strand=Plus/Plus
Query 2979 CAAGATCATCAGATGG-TAGCGGAAACACATCTCACAACGGTGATGTTTCTGGAACTGAC 3037
||||||||||||| || ||| |||| ||| | | |||||||||||||||||||| ||
Sbjct 2905 CAAGATCATCAGA-GGACAGCAGAAATGCATATGAGAACGGTGATGTTTCTGGAACGGAG 2963
Query 3038 TCTGGTGATGGTGAAGATTGTTATCGCGAAGATGATATAGA-C-C-ATAATAAGGTAGAA 3094
||||||| |||||||| | | || || |||||| | || | | ||| ||||| ||||
Sbjct 2964 TCTGGTGGTGGTGAAG---G-T-CCG-GAGGATGATTTGGATCGCAATAGTAAGGGAGAA 3017
Query 3095 AGTGAAGGTGAGGCTGAAGAAGGTATGTCTGATGGCCATGATGATACTGAAGGAGATATG 3154
|| ||| | |||||| ||||||||| ||||| | || ||||| |||||| |||| |
Sbjct 3018 AGCGAATGCGAGGCT---GAAGGTATGGCTGAT-G-CA-CATGATGCTGAAGAAGATGGG 3071
Query 3155 CCTGTGTTGTCCATCTCAGTAAAAAACCTGCTACATGTGAAA-CCTCTT-GCAAAGTATG 3212
||| || || | |||| | | | | || ||||| ||| || ||| ||||||||||
Sbjct 3072 TCTGCCTTACCCTTTTCAGCACGATTCTTACTGCATGT-AAAGCC-CTTAGCAAAGTATG 3129
Query 3213 -TCCCTC--C---AGCTTTGTACGATAAGGACAACGATGATTCTCGGAAGAACTCACAAG 3266
||| || | ||||||| | || ||||| || | || |||| ||||||||| ||||
Sbjct 3130 TTCCTTCAACTATAGCTTTGCATGACAAGGAGAA--A-GACTCTCTGAAGAACTCCCAAG 3186
Query 3267 TCTTTTATGGGAATGATTCTTTTTATGTTCTATTCAGGCTTCATCAG-ATTTTGTATGAC 3325
|||| |||| |||||||| ||||| | || |||||||| || | | || ||||| ||
Sbjct 3187 TCTTCTATGCAAATGATTCATTTTACGCGCTTTTCAGGCTGCA-CCGAATATTGTACGAG 3245
Query 3326 AGAATATTATCAGCAAAAATCAATTCATCATCTCCAGATAGAAAGTGGAAGACCTCAAAT 3385
|||||| ||||||||||| | || |||||||| || || ||||||||| ||||||||||
Sbjct 3246 AGAATACTATCAGCAAAAGTTAACTCATCATCCCCGGAGGGAAAGTGGAGGACCTCAAAT 3305
Query 3386 -CCAACAAACCCCGCTGATTCGTACGCCAGAATCATGGA-TGCTCTCTACAATTTGCTCG 3443
|||| ||| || ||||||| || |||||| |||| || |||||||||||| || || |
Sbjct 3306 ACCAA-AAATCCTACTGATTCCTATGCCAGATTCAT-GACTGCTCTCTACAACTTACTTG 3363
Query 3444 ATGGCACATCCGATAATTCAAAGTTCGAAGATGATTGCCGAGCAATTATCGGGACCCAGT 3503
|||| ||||| |||||| | ||||| |||||||| |||||||| || |||||||| ||||
Sbjct 3364 ATGGTACATCTGATAATGCCAAGTTTGAAGATGACTGCCGAGCGATAATCGGGACTCAGT 3423
Query 3504 CATATGTTCTCTTCACATTAGACAAACTGATCTATAAGCTCATCAAGCATCTCCAAGCAG 3563
| ||| ||||||||||||| |||||||||||| |||| |||||||||||||||||| ||
Sbjct 3424 CGTATATTCTCTTCACATTGGACAAACTGATCCATAAATTCATCAAGCATCTCCAAGGAG 3483
Query 3564 TAGCAGCTGATGAGATGGACAACAAA-TTACAACAGCTTTATGCTTATGAGAAATCCAGA 3622
|||||||||||||||||||||||||| || | ||||||||||| |||||||||||||||
Sbjct 3484 TAGCAGCTGATGAGATGGACAACAAACTT-CTGCAGCTTTATGCATATGAGAAATCCAGA 3542
Query 3623 AAGCCTGAGAA-G-TTTCTGGATGCTGTTTATTACGAAAATGCTCTTGTGCTTCTTCCC- 3679
| |||||| || | ||| | ||||||||||||||||| ||||| | ||| |||| ||||
Sbjct 3543 AGGCCTGA-AACGATTT-TTGATGCTGTTTATTACGATAATGCCCGTGTCCTTC-TCCCT 3599
Query 3680 GATGAGGATATATACCGCATTGAATGTGAACAATCGACACCAAG-CAAACTCTCTATTCA 3738
|||||| |||| ||||| ||||||||| || ||| || || || |||||||||||||||
Sbjct 3600 GATGAGAATATTTACCGTATTGAATGTAAATTATCAAC-CCCAGCCAAACTCTCTATTCA 3658
Query 3739 GCTTCTG-GACTATGGACATGATAAGCCTGATGTGACATCCATATCCATGGACCCAACTT 3797
|||| || | | | || | ||| ||||| ||||||||||| ||||||| ||||| || |
Sbjct 3659 GCTTATGTG-CAACGGCCTTGAAAAGCCCGATGTGACATCTGTATCCATTGACCCGACCT 3717
Query 3798 TTGCAGCTTACCTCCACAATGTA-TTCCT-TTCTTATCAACCTAATGCGAA-AGAGAATC 3854
||||||||||||||| ||||| | ||||| | | || ||| | ||||| || ||| |||
Sbjct 3718 TTGCAGCTTACCTCCGCAATG-ACTTCCTCTCCGTA-CAATCGAATGC-AAGGGAGGATC 3774
Query 3855 CTCGAATCTATTTGAAA-CGGAATAAGCGTAAAAATGGTGGTGACGATGAAC---TCTGC 3910
| |||||||||| ||| |||| ||||| ||| | ||||| | ||||||| | | |
Sbjct 3775 GTAGAATCTATTT-AAATAGGAACAAGCGCAAAGTTTGTGGTAAAGATGAACAGTTATAC 3833
Query 3911 ACCACGGATGAAGTTAAGATTATTAATGGTTTGGAATGTAAGATAACCTGCAGTTCTTCA 3970
| ||| |||| ||||||||||| ||||| ||||| ||||||||| ||||| ||||||||
Sbjct 3834 AGCACAGATGGAGTTAAGATTAAAAATGGGTTGGAGTGTAAGATAGCCTGCGGTTCTTCA 3893
Query 3971 AAGGTCTCCTATGTATTAGACACCGAGGATGTGTTG 4006
|||||||||||||||||||| || || ||| |||||
Sbjct 3894 AAGGTCTCCTATGTATTAGAAACAGAAGATTTGTTG 3929
Score = 514 bits (278), Expect = 2e-144
Identities = 471/561 (84%), Gaps = 26/561 (5%)
Strand=Plus/Plus
Query 152 ACCATGGTTGGAGGAAGTAGTGCACAGAAGCTAACTACAAATGATGCACTTGCATATCTT 211
||||||||||||||| | ||||| |||||||||||||||||||| || |||||||| |||
Sbjct 36 ACCATGGTTGGAGGAGGAAGTGCTCAGAAGCTAACTACAAATGACGCGCTTGCATACCTT 95
Query 212 AAAGCTGTCAAGGATAAATTTCAAGATAAACGTGACAAATACGATGAGTTTCTTGAGGTT 271
||||| || |||||||||||||| ||| ||||||| |||||||| ||||||||||||||
Sbjct 96 AAAGCCGTGAAGGATAAATTTCAGGATCAACGTGAAAAATACGACGAGTTTCTTGAGGTC 155
Query 272 ATGAAAG-ATTTTAAAG-CTCAGAGAGTTGATACTA-CTGGTGTTATCTTAAGGGTGAAA 328
||| ||| ||||| ||| |||| |||||||||| | ||||||| || ||| || |||
Sbjct 156 ATG-AAGAATTTT-AAGTCTCATCGAGTTGATAC-AGCTGGTGTGATAACAAGAGTAAAA 212
Query 329 GAACTTTTTAAAGGG-AACAGAGAATTGATTTTGGGGTTT-AATACTTTCTTACCAAAGG 386
|||||||| |||||| | || ||| || || || |||||| ||||| ||||| |||||||
Sbjct 213 GAACTTTTCAAAGGGCACCA-AGAGTTAATATT-GGGTTTCAATACCTTCTTGCCAAAGG 270
Query 387 GTTTCGAGATAACTCTCCGACCCGAGGAT-GACCAACCCGCTGCACCAAAGAAGC-CTGT 444
|||| ||||| || |||| ||| || ||| || ||| | || ||| |||||| | | ||
Sbjct 271 GTTTTGAGATCACACTCCAACCTGAAGATGGA-CAA--C-CTCCACTAAAGAAACGC-GT 325
Query 445 TGAGTTTGAGGAAGCTATTAGTTTTGTTAACAAGATTAAGACAAGGTTTCAAGGCGATGA 504
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 326 TGAGTTTGAGGAAGCAATTAGTTTTGTTAACAAGATTAAGACAAGGTTTCAGGGCGACGA 385
Query 505 TCGTGTATACAAATCGTTTTTAGACATTTTGAACATGTATAGAAAGGAAAACAAGTCTAT 564
||||||||||||||| |||||||||||||| |||||||| |||||||| | |||||| ||
Sbjct 386 TCGTGTATACAAATCATTTTTAGACATTTTAAACATGTACAGAAAGGATAGCAAGTCCAT 445
Query 565 TACTGAGGTCTACCATGAGGTGGCTATCCTTTTTCGGGACCATCACG-ATTTGCTTGGAG 623
||||| |||||||| ||||| || |||| |||||||| ||| ||| ||||||||| ||
Sbjct 446 AACTGAAGTCTACCAGGAGGTTGCCGTCCTATTTCGGGATCAT-ACGGATTTGCTTGTAG 504
Query 624 AGTTCACTCACTTTCTCCCTGATACTTCAGCAACTGCATCTACTAATGATTCTGT-AAAA 682
|||| ||||||||||| ||||||||||||||||| | |||| | | ||||||| ||||
Sbjct 505 AGTTTACTCACTTTCTGCCTGATACTTCAGCAACACCCTCTA-T--TCATTCTGTGAAAA 561
Query 683 GTTCCAG-TACGTGATAGAGG 702
||| || | || || |||||
Sbjct 562 CTTC-AGCT-CGCGACAGAGG 580
> Ahg912174 jgi|Araly1|912174|Al_scaffold_0001_2428
Length=1671
Score = 337 bits (182), Expect = 5e-91
Identities = 322/387 (83%), Gaps = 20/387 (5%)
Strand=Plus/Plus
Query 328 AGAACTTTTTAAAGGGA-A-CAGAGAATTGATTTTG-GGGTTT-AATACTTTCTTACCAA 383
||||||||| ||| ||| | || ||| ||||| | ||||| ||||| ||||| ||||
Sbjct 130 AGAACTTTTCAAA-GGACACCA-AGAGTTGATACAGCTGGTTTCAATACCTTCTTGCCAA 187
Query 384 AGGGTTTCGAGATAACTCTCCGACCCGAGGAT-GACCAACCCGCTGCACCAAAGAAGCCT 442
||||||| ||||| || |||| |||||||||| || ||| | || ||| |||||| | |
Sbjct 188 AGGGTTTTGAGATCACACTCCAACCCGAGGATGGA-CAA--C-CTCCACTAAAGAAACGT 243
Query 443 GTTGAGTTTGAGGAAGCTATTAGTTTTGTTAACAAGATTAAGACAAGGTTTCAAGGCGAT 502
|||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 244 GTTGAGTTCGAGGAAGCTATTAGTTTTGTTAACAAGACTAAGACAAGGTTTCAGGGCGAT 303
Query 503 GATCGTGTATACAAATCGTTTTTAGACATTTT-GAACATGTATAGAAAGGAAAACAAGTC 561
||||||||||||| ||| |||||||||||||| || |||||| ||||| || | ||||||
Sbjct 304 GATCGTGTATACATATCATTTTTAGACATTTTAGA-CATGTACAGAAATGATAGCAAGTC 362
Query 562 TATTACTGAGGTCTACCATGAGGTGGCTATCCTTTTTCGGGACCATCACGATTTGCTTG- 620
|| |||||||||||||| ||||| || ||||||||||| || ||| ||||||||||||
Sbjct 363 CATCACTGAGGTCTACCAGGAGGTTGCCATCCTTTTTCGAGATCATAACGATTTGCTTGT 422
Query 621 GAGAGTTCACTCACTTTCTCCCTGATACTTCAGCAACTGCATCTACTAATGATTCTGT-A 679
| || || ||||||||||| ||||||||||||||||| || ||| | | ||||||| |
Sbjct 423 G-GAATTTACTCACTTTCTACCTGATACTTCAGCAACAGCCTCTG-T--TCATTCTGTTA 478
Query 680 AAAGTTCCAGTACGTGATAGAGGCATT 706
||| ||| ||| | ||| ||||| |||
Sbjct 479 AAACTTC-AGTTCTTGACAGAGGGATT 504
Score = 207 bits (112), Expect = 4e-52
Identities = 204/247 (83%), Gaps = 12/247 (5%)
Strand=Plus/Plus
Query 1296 AATCCTTGTGGAGTGAAGGCAAATGTCCTCAACCTACTAAGTCACTTGACAAAGATACAG 1355
|||||||||||||||||||||||| ||||||| | | |||||| ||||| |||| ||
Sbjct 1094 AATCCTTGTGGAGTGAAGGCAAATATCCTCAA-C--C---GTCACTGGACAATGATAGAG 1147
Query 1356 ACCGAGAACGTG-AGA-AGATTGAAAGGTATAGAGAAAGAGACCGTGAGAAGGAGAGGCT 1413
||| ||||| | ||| ||| ||| ||| |||||| ||||| | ||| ||||| |||||
Sbjct 1148 ACCAAGAAC-AGAAGAGAGA-TGACGGGTTTAGAGACAGAGATCATGATAAGGAAAGGCT 1205
Query 1414 TGAAAAGGTGGCAGCGAGTCAGAAATGGGCTAAA-CCTATCAGTGAACTAGATCTCTCGA 1472
|||||| | || || | || ||||||||| ||| || || |||||||||||||||||||
Sbjct 1206 TGAAAAAGCAGCTGCAAATCTGAAATGGGC-AAAGCCGATTAGTGAACTAGATCTCTCGA 1264
Query 1473 ACTGTGAACAGTGCACACCTAGTTATCGGAGACTTCCAAAGAATTATCCAATTCCTATAG 1532
|||||||||| ||||| |||||||||||| ||||||||||||||| || ||| |||| |
Sbjct 1265 ACTGTGAACAATGCACTCCTAGTTATCGGTTACTTCCAAAGAATTACCCTATTTCTATTG 1324
Query 1533 CAAGCCA 1539
|||||||
Sbjct 1325 CAAGCCA 1331
Score = 130 bits (70), Expect = 1e-28
Identities = 121/143 (85%), Gaps = 13/143 (9%)
Strand=Plus/Plus
Query 155 ATGGTTGGAGGAAGTAGTGCACAGAAGCTAACTACAAATGATGCACTTGCATATCTTAAA 214
|||||||||||||||||||||||||||||||||||||||| || | | ||||||
Sbjct 1 ATGGTTGGAGGAAGTAGTGCACAGAAGCTAACTACAAATG---CA-TA-C----CTTAAA 51
Query 215 GCTGTCAAGGATAAATTTCAAGATAAACGTG-ACAAATACGATGAGTTTCTTGAGGTTAT 273
|||||||||||||||||||| ||| |||| | | ||||| || ||||||||||| || ||
Sbjct 52 GCTGTCAAGGATAAATTTCAGGATCAACGCGGA-AAATATGACGAGTTTCTTGAAGTCAT 110
Query 274 GAAAGA-TTTTAAAGCTCAGAGA 295
||| || ||||||| ||||||||
Sbjct 111 GAA-GAATTTTAAATCTCAGAGA 132
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 169584545288
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5