BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G72130.1 Length=1798 Score E Sequences producing significant alignments: (Bits) Value Ahg316182 jgi|Araly1|316182|fgenesh1_pm.C_scaffold_2001215 2318 0.0 Ahg339434 jgi|Araly1|339434|fgenesh1_pg.C_scaffold_2001533 1463 0.0 Ahg339433 jgi|Araly1|339433|fgenesh1_pg.C_scaffold_2001532 695 0.0 > Ahg316182 jgi|Araly1|316182|fgenesh1_pm.C_scaffold_2001215 Length=1608 Score = 2318 bits (1255), Expect = 0.0 Identities = 1505/1624 (93%), Gaps = 23/1624 (1%) Strand=Plus/Plus Query 21 ATGGCTATCACCTACTCCTCCGCCGACGAGCTCGGAAACACCACTGAGGGTTTTCTGGAA 80 ||||| |||||| ||||||||| | ||||||||||| ||||||||||||||||| ||| Sbjct 1 ATGGCAATCACCCGTTCCTCCGCCAATGAGCTCGGAAATACCACTGAGGGTTTTCTCGAA 60 Query 81 ATCCGAGAAAATACCTCCGGTGGATGGAAATCAGCGAGGCTCATCATCGTTGTACAAATG 140 |||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||| Sbjct 61 ATCCGAGAAAATACCTCCGGTGGATGGAAATCCGCGAGGCTCATCATCGGTGTAGAAATG 120 Query 141 GCGGAGCGATTCGCTTACTTTGGTATAGCGTCAAACCTAATAATGTACTTGACGGGACCG 200 ||||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||| Sbjct 121 GCGGAGCGATTTGCTTACTTTGGCATAGCGTCAAACCTAATAATGTACCTGACAGGACCA 180 Query 201 TTAGGTGAGTCAACAGCTG-CAGCGGCAGCGAATGTCAATGCTTGGACTGGAACGGTGGC 259 ||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||| | Sbjct 181 TTAGGTGAGTCAACAGCTGTC-GCGGCAGCGAATGTCAATGCTTGGGTTGGAACAGTGTC 239 Query 260 GTTTCTGCCGCTTCTCGGGGGCTTTCTCGCTGACTCGTATCTCGGTCGTTTCCGTACTAT 319 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 240 GTTTCTGCCGCTTCTCGGGGGCTTTGTCGCTGACTCGTTTCTCGGTCGTTTCCGTACTAT 299 Query 320 AATCATCTCATCTTCTCTCTATATCTTGGGACTTGGGTTGCTGTCTTTTTCAACCATGAT 379 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 300 CGCCATCTCATCTTCTCTCTATATCTTGGGACTTGGGTTGCTGTCCTTTTCAACCATGAT 359 Query 380 TCCTTCTCATCAGTCCAAAGATTCGAATCAGCTGCAAGAGACTATCTTCTTCTTCTCTCT 439 ||||||||| | | |||||||||||||||||| |||| |||| ||||||||| |||||| Sbjct 360 TCCTTCTCA-CCG--CAAAGATTCGAATCAGCTCCAAGTGACTCTCTTCTTCTGCTCTCT 416 Query 440 TTATCTTGTAGCAATAGGACAAGGCGGTTACAACCCGTGTATTAAGGTATTTGGAGCGGA 499 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| || Sbjct 417 GTATCTTGTAGCAATAGGACAAGGCGGTTACAAACCGTGTATCAAGGTATTTGGAGCTGA 476 Query 500 TCAATTCGATGGAAATGATCAT-AAAGAGGCAAGAGACAAGAGTTCATTCTTCAACTGGT 558 |||||||||||||||||||| | |||||||||| |||||||||||| ||||||||||||| Sbjct 477 TCAATTCGATGGAAATGATC-TAAAAGAGGCAAAAGACAAGAGTTCTTTCTTCAACTGGT 535 Query 559 TGATGTTTGGAAACTGTATTAGCATATTGACGACTCGTTTGGTCTCTACCTACATTCAAG 618 ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||| Sbjct 536 TGATGTTTGGAAACTGTATTAGCATCTTGACGACTCGTTTAGTCTCTACCTATATTCAAG 595 Query 619 AGAACCTAAGCTGGTCACTAGGGTTTGGTATTCCTAGTGTTTCCATGTTGCTTTCTCTGT 678 |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct 596 AGAACCTAAGCTGGTCACTAGGATTTGGTATTCCAAGTGTTTCCATGTTGCTTGCTCTGT 655 Query 679 TTCTCTTCCTCCTTGGAACTACCTCTTACCGTTTTAGTACTGAGAGAGTAGGAAAGAAAA 738 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 656 TTCTCTTCCTCCTTGGAACTAACTCTTACCGTTTTAGTACTGAGAGAGAAGGAAAGAAAA 715 Query 739 ACCCTTTTGCCAGAATCAGTCGTGTATTCATGGAGGCTTTAAAGAA-CAGAAGACAACCC 797 |||||||||| |||||||||||||| |||||||||||||||||||| || |||||||||| Sbjct 716 ACCCTTTTGCGAGAATCAGTCGTGTTTTCATGGAGGCTTTAAAGAACCA-AAGACAACCC 774 Query 798 GATTTAGATATTGCTAACGCGAACGCCAACGAGACTCTCCTTCTCCTGGCTCACCAGAGT 857 |||||||||| || || ||||| ||||||||||||||||||||||||||||||||| Sbjct 775 GATTTAGATA-----AA-GCTAACGCGAACGAGACTCTCCTTCTCCTGGCTCACCAGAGT 828 Query 858 TCCAAACAGTTCAGATTCCTAGACAGGGCAGCTATTTCTTGTGAATTGGCTGAAATTGAA 917 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 829 TCCAAACAGTTCAGATTCCTAGACAGGGCAGCTATTTCATGTGAATTGGCTGAAATTGAA 888 Query 918 GAAGCAAAGGCGGTTCTTAGGCTTATTCCCATATGGATAACTT-CTGTAGTCTACACCAT 976 ||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| Sbjct 889 GAAGCAAAGGCGGTTCTTAGGCTTATTCCCATATGGATAACTTGC-GTAGTTTACACCAT 947 Query 977 TGTACATGCACAATCCCCTACtttttttACAAAGCAAGGAGCCACAATGGACAGGTCAAT 1036 ||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| Sbjct 948 TGTACATGCACAAGCCCCTACTTTCTTTACAAAGCAAGGAGACACAATGGACAGGTCAAT 1007 Query 1037 CTCACCAGGACTCTTAGTTCCTGCAGCTACACTTCAAAGTTTCATAAACCTCTCAGTAGT 1096 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 1008 CTCACCAGGACTCTTAGTCCCTGCAGCTACACTTCAAAGTTTCATAAACCTCTCAATAGT 1067 Query 1097 CGTTTTCATCCCAATCTACGACCGCTTACTCGTCCCATTCGCAAGGTCCTTCACTCAAAA 1156 |||||||||||| ||||||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 1068 CGTTTTCATCCCCATCTACGACCGTTTACTCGTCCCATTTGCAAGATCCTTTACTCAAAA 1127 Query 1157 -CTCATCAGGTATCACAACGCTACAAAGGATTGGTACAGGGATTTTCCTCTCCATTCTTG 1215 | ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1128 AC-CATCAGGAATCACAATGCTACAAAGGATTGGTACAGGAATTTTCCTCTCCATTCTTG 1186 Query 1216 CTATGGTATTAGCCGCATTGGTCGAGACAAAAAGGCTCCAAGCCGCC-CGGGATGAACTC 1274 |||||||| ||||||| || ||||||| |||||||| || | | | |||||||| ||| Sbjct 1187 CTATGGTAGTAGCCGCCTTAATCGAGACCAAAAGGCTACA-GACTACTCGGGATGACCTC 1245 Query 1275 TCCATACCGATGAGCGTGTGGTGGCTGATTCCACAGTATGTTATCTTTGGAGTCTCAGAT 1334 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 1246 ACCATACCGATGAGCGTGTGGTGGCTGGTTCCACAGTATGTTATCCTTGGAGTCTCAGAT 1305 Query 1335 ATGTTCACAATGGTGGGTTTACAAGAGTTCTTCTACGGCCAAGTCCCTAGTGAGCTTAGG 1394 ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct 1306 GTGTTCACAATGGTGGGTTTGCAAGAGTTCTTCTACGACCAAGTCCCTAGTGAGCTTAGG 1365 Query 1395 AGCGTTGGTATGGCTTTGAACCTAAGCATATACGGGGCGGGAAACTACCTAAGCAGCTTT 1454 ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1366 AGCATTGGTATGGCTTTGAACCTAAGCATATACGGGGCGGGAAACTTCCTAAGCAGCTTT 1425 Query 1455 ATGATATCAGTCATTGATAAAATCACGAACCAGTATGGTCAAAGGAGCTGGTTCGATAAT 1514 |||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||| Sbjct 1426 ATGATATCAGTCATTGATAAAATCACTAGCCAGTATGGTCAAACGAGCTGGTTCGATAAT 1485 Query 1515 GACTTGGACCAAGCTCATCTAGATTACTTCTACTGGCTACTGGCTTGTCTCGGCTTCATT 1574 |||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 1486 GACTTGAACCAAGCTCATCTAGATTACTTCTACTGGCTACTCGCTTGTCTCAGCTTCATT 1545 Query 1575 GGTTTCGCCTTCTACTTATGGTTCGCCAAGTCATATGTCTACAGCAGATCAAACACCTTT 1634 ||||| |||| ||| ||||||||||||||||| |||| ||||| |||| | ||||| ||| Sbjct 1546 GGTTTAGCCTCCTATTTATGGTTCGCCAAGTCGTATGCCTACAACAGACCGAACAC-TTT 1604 Query 1635 -TAA 1637 ||| Sbjct 1605 CTAA 1608 > Ahg339434 jgi|Araly1|339434|fgenesh1_pg.C_scaffold_2001533 Length=1605 Score = 1463 bits (792), Expect = 0.0 Identities = 1300/1541 (84%), Gaps = 52/1541 (3%) Strand=Plus/Plus Query 94 CCTCCGGTGGATGGAAATCAGCGAGGCTCATCATCGTTGTAC-AAATGGCGGAGCGA-TT 151 |||| || ||||||||||| || ||||| ||||||| ||| | |||||||||| | | || Sbjct 86 CCTCTGGAGGATGGAAATCGGCCAGGCTAATCATCGGTGT-CGAAATGGCGGAAC-AGTT 143 Query 152 CG-CTTACTT-TGGTATAGCGTCAAACCTAATAATGTACT-TGACGGGACCGTTAGGTGA 208 || ||| || || || | || ||| | |||| ||| | |||| ||||| | || || Sbjct 144 CGCCTT--TTACGGGATTTCCTCGAACTTGATAACGTA-TCTGACCGGACCACTGGGGGA 200 Query 209 GTCAACAGCTGCAGCGGCAGCGAATGTCAATGCTTGGACTGGAACGGTGGCGTTTCTGCC 268 |||||||||||| || ||||| |||||||| || ||||||||||||||| |||||||||| Sbjct 201 GTCAACAGCTGCCGCTGCAGCCAATGTCAACGCATGGACTGGAACGGTGTCGTTTCTGCC 260 Query 269 GCTTCTCGGGGGCTTTCTCGCTGACTCGTATCTCGGTCGTTTCCGTACTATAATCATCTC 328 |||||| |||||||| |||||||||||| ||| || ||||||||||| || | ||| | Sbjct 261 CCTTCTCTGGGGCTTTATCGCTGACTCGTTTCTTGGACGTTTCCGTACAATCGTGATCGC 320 Query 329 ATCTTCTCTCTATATCTTGGGACTTGGGTTGCTGTCTTTTTCAACCATGATTCCTTCTCA 388 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 321 GTCTTCTCTCTATATCTTGGGACTTGGGTTGCTGTCTTTTTCAGCCATGGCTCCTTCTAA 380 Query 389 TCAGTCCAAAGATTCGAATCAGCTGCAAGAGACTATCTTCTTCTTCTCTCTTTATCTTGT 448 | || |||||| | ||||| || |||| || | ||||||||| |||||| |||||| | Sbjct 381 -C--TCTAAAGATCCAAATCAACTCCAAGTGATTCTCTTCTTCTGCTCTCTGTATCTTAT 437 Query 449 AGCAATAGGACAAGGCGGTTACAACCCGTGTATTAAGGTATTTGGAGCGGATCAATTCGA 508 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 438 AGCAATAGGACAAGGCGGTTACAAACCGTGTATTAAGGTATTTGGAGCAGATCAATTCGA 497 Query 509 TGGAAATGATCAT-AAAGAGGCAAGAGACAAGAGTTCATTCTTCAACTGGTTGATGTTTG 567 ||||||||||| | |||||||||| || ||||||||| ||||| |||||||| ||||||| Sbjct 498 TGGAAATGATC-TCAAAGAGGCAAAAGCCAAGAGTTCTTTCTTTAACTGGTTAATGTTTG 556 Query 568 GAAACTGTATTAGCATATTGACGACTCGTTTGGTCTCTACCTACATTCAAGAGA-ACCTA 626 ||| ||| ||||||||||||| ||||| |||||||||| |||||||||||| | ||||| Sbjct 557 GAAGTTGTGTTAGCATATTGACCACTCGATTGGTCTCTAGCTACATTCAAGA-ATACCTA 615 Query 627 AGCTGGTCACT-AGGGTTTGGTATTCCTAGTGTTTCCATGTTGCTTTCTCTGTTTCTCTT 685 || ||||| || ||| ||||||||||| |||||||||||| | ||| ||||| ||||||| Sbjct 616 AGTTGGTC-CTTAGGATTTGGTATTCCAAGTGTTTCCATGCTACTTGCTCTGCTTCTCTT 674 Query 686 CCTCCTTGGAACTACCTCTTACCGTTTTAGTACTGAGA-GAGTAGGAAAGAAAAACCCTT 744 ||| ||||| |||| ||||||| |||||| || | | ||| |||||||||||| || | Sbjct 675 CCTTCTTGGCACTAAGACTTACCGCTTTAGTGCT-ACAAGAGGAGGAAAGAAAAATCCGT 733 Query 745 TTGCCAGAATCAGTCGTGTATTCATGGAGGCTTTAAAGAACAGAA-GACAACCCGATTTA 803 |||| |||||||||||||| ||||||| ||||||||||| |||| | ||||| |||| | Sbjct 734 TTGCTAGAATCAGTCGTGTTTTCATGGTTGCTTTAAAGAATAGAACG-CAACCAGATTCA 792 Query 804 GATATTGCTAACGCGAACGCCAACGAGACTCTCCTTCTCCTGGCTCACCAGAGTTCCAAA 863 |||| |||||| | || |||||||| | | ||||| | | ||||||||||||| Sbjct 793 TATATAGCTAAC-C---CG--AACGAGAC-C-C-TTCTCATT--T-ACCAGAGTTCCAAG 840 Query 864 CAGTTCAGATTCCTAGACAGGGCAGCTATTTCTTGT-GAATTGGCTGAAATTGAAGAAGC 922 || ||||| ||||| |||| |||||| ||||| ||| | ||| |||||||||||||||| Sbjct 841 CAATTCAGGTTCCTCGACAAGGCAGCGATTTCGTGTAGTTTTG-CTGAAATTGAAGAAGC 899 Query 923 AAAGGCGGTTCTTAGGCTTATTCCCATATGGATAACTTCTGTAGTCTACACCATTGTACA 982 ||| ||||| |||| |||| ||||||||||| | |||| | |||||||| | |||||| Sbjct 900 AAAAGCGGTGCTTAAGCTTGTTCCCATATGGCTGACTTGTTTAGTCTACGCTATTGTATG 959 Query 983 TGCACAATCCCCTACtttttttACAAAGCAAGGAGCCACAATGGACAGGTCAATCTCACC 1042 ||||||||||| |||||| || |||||||||||||||| ||||||||| |||||||| || Sbjct 960 TGCACAATCCCATACTTTCTTCACAAAGCAAGGAGCCAAAATGGACAGATCAATCTCTCC 1019 Query 1043 AGGACTCTTAGTTCCTGCAGCTACACTTCAAAGTTTCATAAACCTCT-CAGTAGTCGTTT 1101 |||||||||||| ||||| |||||||| ||| ||||||||| ||| | || | ||| ||| Sbjct 1020 AGGACTCTTAGTCCCTGCGGCTACACTCCAATGTTTCATAAGCCT-TACAATGGTCATTT 1078 Query 1102 TCATCCCAATCTACGACCG-CTTACTCGTCCCATTCGCAAGGTCCTTCACTCAAAACTCA 1160 | ||||||||||||||||| || ||||||||| ||||||| || |||||||| ||| | Sbjct 1079 TTATCCCAATCTACGACCGTCTC-CTCGTCCCAATCGCAAGATCTTTCACTCATAACCCT 1137 Query 1161 TCAGGTATCACAACGCTACAAAGGATTGGTACAGGGATTTTCCTCTCCATTCTTGCTATG 1220 ||||| ||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct 1138 TCAGGAATCACAATGCTACAAAGGATTGGCACAGGGATTTTTCTCTCCATCCTTGCTATG 1197 Query 1221 GTATTAGCCGCATTGGTCGAGACAAAAAGGCTCCAAGCCGCCCGGGATGAACTCTC-CA- 1278 ||| ||||||| ||||| |||| ||||||||||||| ||| | ||| || | || || Sbjct 1198 GTAGTAGCCGCCTTGGTAGAGAGAAAAAGGCTCCAAATCGCTCATGAT-AA-TGTCACAA 1255 Query 1279 TACCGATGAGCGTGTGGTGGCTGATTCCACAGTATGTTATCTT-TGGAGTCTCAGATATG 1337 ||| ||||||||||||||| || |||||||||| ||| | || ||||||||| || || Sbjct 1256 TACTAATGAGCGTGTGGTGGTTGGTTCCACAGTACGTTCT-TTATGGAGTCTCGGACGTG 1314 Query 1338 TTCACAATGGTGGGTTTACAAGAGTTCTTCTACGGCCAAGTCCCTAGTGAGCTTAGGAGC 1397 |||| |||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 1315 TTCA---TGGTGGGTTTGCAAGAGTTCTTCTACGACCAAGTCCCTAGTGAGCTTAGGAGT 1371 Query 1398 GTTGGTATGGCTTTGAACCTAAGCATATACGGGG-CGGGAAACTACCTAAGCAGCTTTAT 1456 |||||||||||| |||| |||||||||||||||| ||| ||||| ||||||||||| || Sbjct 1372 GTTGGTATGGCTCTGAATCTAAGCATATACGGGGTCGG-AAACTTTCTAAGCAGCTTCAT 1430 Query 1457 GATATCAGTCATTGATAAAATCACGAACCAGTATGGTCAAAGGAGCTGGTTCGATAATGA 1516 ||||||| |||||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct 1431 GATATCAATCATTGATAAAATCACGAGCCAGTCTGGTCAAACGAGCTGGTTCGATAATGA 1490 Query 1517 CTTGGACCAAGCTCATCTAGATTACTTCTACTGGCTACTGGCTTGTCTCGGCTTCATTGG 1576 ||| |||| |||||||||||||| |||||||||||||| ||||||||| ||| |||||| Sbjct 1491 CTTAAACCATGCTCATCTAGATTATTTCTACTGGCTACTCGCTTGTCTCAGCTCCATTGG 1550 Query 1577 TTTCGCCTTCTACTTATGGTTCGCCAAGTCATATGTCTACA 1617 ||| | || |||||| |||||||||||||| ||| | |||| Sbjct 1551 TTTAGTCTCCTACTTGTGGTTCGCCAAGTCGTATCTTTACA 1591 > Ahg339433 jgi|Araly1|339433|fgenesh1_pg.C_scaffold_2001532 Length=1350 Score = 695 bits (376), Expect = 0.0 Identities = 539/617 (87%), Gaps = 14/617 (2%) Strand=Plus/Plus Query 1028 CAGGTCAATCTCACCAGGACTCTTAGTTCCTGCAGCTACACTTCAAAGT-T-TCATAAAC 1085 ||| ||||| ||| ||||||||||||| |||||||||||||| |||||| | || | | Sbjct 741 CAGTTCAATTTCATCAGGACTCTTAGTCCCTGCAGCTACACTCCAAAGTATCTC-T-AGT 798 Query 1086 CTCTCAGTAGTCGTTTTCATCCCAATCTACGACCG-CTTACTCGTCCCAT-TCGCAAGGT 1143 || ||| | |||||||||||||||||||||||||| ||| || ||||| | ||||||| | Sbjct 799 CTATCAATGGTCGTTTTCATCCCAATCTACGACCGTCTT-CTTGTCCC-TATCGCAAGAT 856 Query 1144 CCTTCACTC-AAAACTCATCAGGTATCACAACGCTACAAAGGATTGGTACAGGGATTTTC 1202 |||| |||| ||||| ||||||| ||||||| ||| |||||||| | |||||||||||| Sbjct 857 CCTTAACTCAAAAAC-CATCAGGAATCACAATGCTTCAAAGGATCGACACAGGGATTTTC 915 Query 1203 CTCTCCATTCTTGCTATGGTATTAGCCGCATTGGTCGAGACAAAAAGGCTCCAAGCCGCC 1262 ||||||||||||||||||||| ||||||| ||||||||||| |||||||| ||| |||| Sbjct 916 CTCTCCATTCTTGCTATGGTAGTAGCCGCCTTGGTCGAGACCAAAAGGCTACAAACCGCT 975 Query 1263 CGGGATGAACTCTCCATACCGATGAGCGTGTGGTGGCTGATTCCACAGTATGTTATCTTT 1322 | ||||| || | || | ||||| |||||||||||| |||| ||||||||||||| | Sbjct 976 CATGATGATGTCACAATTCTAATGAGTGTGTGGTGGCTGGTTCCGCAGTATGTTATCTAT 1035 Query 1323 GGAGTCTCAG-ATATGTTCACAATGGTGGGTTTACAAGAGTTCTTCTACGGCCAAGTCCC 1381 |||||||| | | | ||||||||||||||||| |||||||||||||||| |||||| || Sbjct 1036 GGAGTCTC-GAACGTCTTCACAATGGTGGGTTTGCAAGAGTTCTTCTACGACCAAGTTCC 1094 Query 1382 TAGTGAGCTTAGGAGCGTTGGTATGGCTTTGAACCTAAGCATATACGGGGCGGGAAACTA 1441 |||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||||| Sbjct 1095 TAGTGAGCTTAGGAGCGTTGGTATGGCTCTGAATCTAAGCATATACGGGACCGGAAACTT 1154 Query 1442 CCTAAGCAGCTTTATGATATCAGTCATTGATAAAATCACGAACC-AGTATGGTCAAAGGA 1500 | |||||||||| ||||||||||||||||||||| |||| |||| || |||||||| || Sbjct 1155 CGTAAGCAGCTTCATGATATCAGTCATTGATAAAGTCACAAACCAAG-CTGGTCAAACGA 1213 Query 1501 GCTGGTTCGATAATGACTTGGACCAAGCTCATCTAGATTACTTCTACTGGCTACTGGCTT 1560 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 1214 GCTGGTTCAATAATGACTTGAACCAAGCTCATCTAGATTACTTCTACTGGCTACTCGCTT 1273 Query 1561 GTCTCGGCTTCATTGGTTTCGCCTTCTACTTATGGTTCGCCAAGTCATATGTCTACAGCA 1620 ||||| ||||||||||||| |||| ||| |||||||||||||||||||||||||||| || Sbjct 1274 GTCTCAGCTTCATTGGTTTAGCCTCCTATTTATGGTTCGCCAAGTCATATGTCTACAACA 1333 Query 1621 GATCAAACACCTTTTAA 1637 || |||||||||||||| Sbjct 1334 GACCAAACACCTTTTAA 1350 Score = 385 bits (208), Expect = 7e-106 Identities = 244/261 (93%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 407 TCAGCTGCAAGAGACTATCTTCTTCTTCTCTCTTTATCTTGTAGCAATAGGACAAGGCGG 466 |||||| |||| |||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct 387 TCAGCTCCAAGTGACTCTCTTCTTCTGCTCTCTGTATCTTGTAGCAATAGGACAAGGCGG 446 Query 467 TTACAACCCGTGTATTAAGGTATTTGGAGCGGATCAATTCGATGGAAATGATCAT-AAAG 525 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 447 TTACACCCCGTGTATTAAGGTATTTGGAGCGGATCAATTCGATGGAAATGATC-TAAAAG 505 Query 526 AGGC-AAGAGACAAGAGTTCATTCTTCAACTGGTTGATGTTTGGAAACTGTATTAGCATA 584 |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 506 AGGCAAAG-GACAAGAGTTCTTTCTTCAACTGGTTGATGTTTGGAAACTGTATTAGCATA 564 Query 585 TTGACGACTCGTTTGGTCTCTACCTACATTCAAGAGAACCTAAGCTGGTCACTAGGGTTT 644 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| Sbjct 565 TTGACGACTCGTTTGGTCTCTACCTACATTCAAGAGAACTTAAGCTGGTCATTAGGATTT 624 Query 645 GGTATTCCTAGTGTTTCCATG 665 ||||| || ||||||| |||| Sbjct 625 GGTATCCCAAGTGTTTTCATG 645 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67495914140 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5