BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G74160.1 Length=4096 Score E Sequences producing significant alignments: (Bits) Value Ahg476557 jgi|Araly1|476557|fgenesh2_kg.2__1687__AT1G74160.1 6069 0.0 Ahg472083 jgi|Araly1|472083|fgenesh2_kg.1__2037__AT1G18620.2 130 9e-29 > Ahg476557 jgi|Araly1|476557|fgenesh2_kg.2__1687__AT1G74160.1 Length=4089 Score = 6069 bits (3286), Expect = 0.0 Identities = 3847/4105 (94%), Gaps = 89/4105 (2%) Strand=Plus/Plus Query 34 tctcttcttcttgatttggcggtttctttgctttctgcaactctttcttttcattggttc 93 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 21 TCTTTTCTTCTTGATTTGGCGGTTTCTCTGCTTTCTGCAACTCTTTCTTTTCATTGGTTC 80 Query 94 tGTAGATTTAAACTCACACATTCCGTGTTTTAGGACAACAAACTTCTCAGACAAAAGGGG 153 |||||| || || | |||||| |||||||||| ||||||||||||||||||||| | Sbjct 81 TGTAGACTT-AA--CGCACATTTTGTGTTTTAGG---ACAAACTTCTCAGACAAAAGGAG 134 Query 154 CACACATGTTCTAGTGTTCTGTTTATGGTTTAGTAGTTTATTGAAGATTGGATCTAATTA 213 ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 135 CACACATGTTCTAGTCTTCTGTTTATGGTTTAGTAGTTTATTGACGATTGGATCTAATTA 194 Query 214 CCAAAAGGGTTTTTATCTTTC-TCC----CTCCTTTTGTCTTCAGTGGAATCTGGGAATC 268 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 195 CCAAAAGGGTTTTTATCTTTCTTCCTTTTTTCCTTTTGTCTTCAGTGGAATCTGGGAATC 254 Query 269 TTAGGTTTGTAAAAAGGTTTAAACTTTATTTCCTTTTTAAGATCCGTAGGTTTGATTGCT 328 |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| Sbjct 255 -TAGGTTTGTAAAAAGGCACAAACTTTATTTCCTTTTTTAGATCCGTAGG-TTGATTGCT 312 Query 329 GTTAGTGTAGGACTCAGATTAATTTAGGGGTTTTCTTGAGCTTTAATTAAGCTGGAGAAG 388 ||||||||||||||||||||||||| |||| ||| |||||||||||||||||| | || Sbjct 313 GTTAGTGTAGGACTCAGATTAATTTTGGGGGTTT-TTGAGCTTTAATTAAGCT---G-AG 367 Query 389 ACAATGGGTTTCTTCTGATTTGAAATCTTAAAC-GG-tt----tttttCTACAAAGAGAA 442 | | ||||||||||||||||||| ||| || || ||||||||||||||||| Sbjct 368 ----T--G--TCTTCTGATTTGAAATCTT-AACGGGTTTCAAGTTTTTCTACAAAGAGAA 418 Query 443 GGGCTAAAATTTTGGAGTTTTATGAATATGGAAGGTGCGTCATTCTCGTTATAGTTTTAA 502 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 419 AGGCTAAAATTTTGGAGTTATATGAATATGGAAGGTGCGTCATTCTCGTTATAGTTTTAA 478 Query 503 TGGTGGTTACTG-TT--TGAT---GA-TG-GAGAAAGaa-aaaaaGAAAGCTTTTAAAGT 553 |||||||||||| || |||| || || ||||||||| |||||||||||||||||||| Sbjct 479 TGGTGGTTACTGTTTGATGATGGAGATTGAGAGAAAGAAGAAAAAGAAAGCTTTTAAAGT 538 Query 554 TATCTCTTCCAAATTATTGCAAACACATCATTGAGGCATAAAGTTTGGGTTTTTGGGAAA 613 ||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct 539 TATCTCTTCCAAATTATTGCAAACACATCATTGAGTCAAAAAGTTTGGGTTTTT-GGAAA 597 Query 614 TCAGTAAAGGGGAACACATCA-TAGAAGAAAGCTTTCAAAGCCaaaaag-aaaaaaGGAG 671 ||| |||||| |||||||||| | |||||||| |||| ||||||||||| |||||||||| Sbjct 598 TCAATAAAGGTGAACACATCACT-GAAGAAAGTTTTCTAAGCCAAAAAGAAAAAAAGGAG 656 Query 672 AAGTCTTTTTGAATCTTTAAGTAGAAAGTTTCCGGCGCCGGAGAATTGTTTTTGTGATCT 731 |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 657 AAGTCTTTTTGAATCTTTCTGTAGAGAGTTTCCGGCGCCGGAGAATTGTTTTTGTGATCT 716 Query 732 GTAGAAAATGGCTGCGAAGCTTCTGCATTCATTGGCAGATGATAGTGCAGATCTGCAGAA 791 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 717 GTAG-AAATGGCTGCGAAGCTTCTGCATTCGTTGGCAGATGATAGTGCAGATCTTCAGAA 775 Query 792 GCAAATTGGATGTATGAATGGGATTTTTCAAATCTTTGATCGTCACCATGTTCTTACTGG 851 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 776 GCAAATTGGATGTATGAATGGGATTTTTCAAATCTTTGATCGCCACCATGTTCTCACTGG 835 Query 852 CCGACGAAAAAGTCTTACTTTAGGTAATGGAAATGCCATTAACATCAATTATGAAAGAGA 911 ||| |||||||| ||||||||||||||||||||||||| || |||||| || || ||||| Sbjct 836 CCGGCGAAAAAGCCTTACTTTAGGTAATGGAAATGCCAATAGCATCAACTACGAGAGAGA 895 Query 912 CTCTGTTGATACAATTTATCAACAAAAAG--A----AA--C-TTTTCAGGACTCCAACAT 962 |||||||||||| |||||||||||||| | || | ||||| ||||||||||| Sbjct 896 GACTGTTGATACAAGTTATCAACAAAAAGACACCGTAAGTCAGTTTCATGACTCCAACAT 955 Query 963 TGGTGGGAATGTGAAAGAGAAGCGAAGGGTTTCAACAGAATCATCTAGAGTTTCTTTCTC 1022 ||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 956 TGGCGGAAATGTGAAAGAGAAGCGAAGGGTTTCAACAGAATCATCGAGAGTTTCTTTCTC 1015 Query 1023 ATCTTCGTGCTCTTCCTCCCCATCGTCTTCTGAGTTCAATAGAGGAGTTCAACCTGACGC 1082 |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 1016 ATCTTCGTGCTCGTCCTCCCCATCCTCTTCTGAGTTCAATAGAGGAGTTCAACCTGAAGC 1075 Query 1083 TTCTGCGTATGACCGAGCTAATTTTCAAGAATCTCCTACAAGTGATCCTGAGATGACTGA 1142 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1076 TTCTGCGTATGACCGAGCCAATTTTCAAGAATCTCCTACAAGTGATCCTGAGATGACTGA 1135 Query 1143 AGGGAATGGATTTTCACATTTGGGACTTGACCTCAGAGATGTTGTGAGAGACTCAATGTA 1202 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1136 AGGGAATGGGTTTTCACATTTGGGATTTGACCTCAGAGATGTTGTGAGAGACTCAATGTA 1195 Query 1203 CAGAGAAGCCAGAGGGCTTTTGAG-TAAGACTCCAATGACTAGAGAGGAAGTAGTTAGAC 1261 ||||||||||||||||||||| | |||| |||||||||| ||||| |||| |||||||| Sbjct 1196 TAGAGAAGCCAGAGGGCTTTTG-GTTAAGTCTCCAATGACAAGAGATGAAGGAGTTAGAC 1254 Query 1262 AGAGCAGACGAGAGGATTCTCCAAGGCCTTATGGTTTGAAGCAATCAACTCCCATGGATC 1321 ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1255 AGAGCAGACGAGAAGATTCTCCAAGGCCTTATGGTTTGAAGCAATCAACTCCTGTGGATC 1314 Query 1322 TCAATGAGTCCTTCAGAGTTCTAGC-AAGACTTAGAGAAACATCTCAACATTATAACGAG 1380 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| Sbjct 1315 TCAATGAGTCCTTCAGAGTTCTAGCGAA-ACTTAGAGAAACATCTCAACATTATAATGAG 1373 Query 1381 CTTGGCATGAAAGATGCGCCTCGTTACTCAGTTGATTCTCATGATACGTTGAAATCCAGA 1440 |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 1374 GTTGGCACGAAAGATGCACCTCGTTACTCAGTTGATTCTCATGATACGCTGAAATCCAGA 1433 Query 1441 CAGAAGCTGAAAGAGTTGCCTAGGCTTTCGCTGGATAGTAGAGAACGAGCGACGCGAAAC 1500 || ||| ||||||||||||||||||||||||||||||||||||| |||| || ||||||| Sbjct 1434 CACAAGATGAAAGAGTTGCCTAGGCTTTCGCTGGATAGTAGAGATCGAGTGATGCGAAAC 1493 Query 1501 TCCAGTGTTGATCCC-AAATCAAGTAAGCTTTCAGAAAGTTTCAGTGAAAGCTGTTCAAG 1559 ||||| ||||| ||| ||| ||||||||||||| ||||||||||||||||| |||||||| Sbjct 1494 TCCAGCGTTGA-CCCTAAAACAAGTAAGCTTTCTGAAAGTTTCAGTGAAAGTTGTTCAAG 1552 Query 1560 CAGTAGCAAGAAACGGCCTCCCAGTGTTGTAGCAAAGCTCATGGGATTGGAGACATTGCC 1619 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1553 CAGCAGCAAGAAACGGCCTCCCAGTGTTGTTGCAAAGCTCATGGGATTGGAGACATTGCC 1612 Query 1620 CGGTTCTCCATTGGGTAGAGACATTCATCAGTTTGGTCTGAACAAAACCAACATCTCTGA 1679 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1613 TGGTTCTCCATTGGGTAGAGACATTCATCAGTTTGGTTTGAACAAAACCAACATCTCTGA 1672 Query 1680 CCAAAATGACGATCCATTCTCAAGATCATTGAGGGAGAAAAATCTGAACCGTGCAATCCG 1739 |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 1673 CCAAAATGACGATCCATTCTCAAGATCATTGAAGGAGAAAAACCTGAACCGTGCAATCCG 1732 Query 1740 TTTTTCTCCTAGCTCACCGAGAAGCTTGGGGAAGGACCCGGCTTCTCCAAGATGGAGAAA 1799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1733 TTTTTCTCCTAGCTCACCGAGAAGCTTGGGGAAGGACCCGGCTTCTCCAAGATGGAGAAA 1792 Query 1800 CTCTGATTTTGTTATGAAACCTCTATCAAATACAAGATTCCCCGTTGAACCAGCTCCATG 1859 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1793 CTCTGATTTTGTTATGAAACCTCTATCAAATACAAGATTCCCTATTGAACCAGCTCCATG 1852 Query 1860 GAAACACGCTGATAGAAACCGAGTTTTGCAAAAGCAAGCTAGCATGCCTGTGAAAGCGAA 1919 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1853 GAAACAAGCTGATAGAAACCGAGTTTTGCAAAAGCAAGCTAGCATGCCTGTGAAAGCAAA 1912 Query 1920 GCCGTATGAAGCACCTAATTTTCCTCCTACTGTGTACAGTGAAATGGAGCGGAGATTGAA 1979 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1913 GCTGTATGAGGCACCTAATTTTCCTCCTACTGTGTACAGTGAAATGGAGCGGAGATTGAA 1972 Query 1980 TGATCTTGAGTTCAAACATTCTGGAAAAGATCTGCGAGCCCTTAAACAAATATTAGAGTC 2039 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 1973 TGATCTTGAGTTCAAACATTCTGGAAAAGATCTGCGAGCTCTTAAACAGATATTAGAGTC 2032 Query 2040 TATGCAGTCAAAAGGTTTCCTAGATACTGAGAAACAACAACAATCCACAAACTTTGCAGT 2099 ||||||||||| |||||||| |||||||||||||||| ||||||| |||||||||||| Sbjct 2033 TATGCAGTCAACGGGTTTCCTGGATACTGAGAAACAACTACAATCCTCAAACTTTGCAGC 2092 Query 2100 TCAAAGAGATTATGAAAGAGAAAATTCTGCAACTTCCAACCATGCAATGTCATCCAGAAC 2159 ||||||||||||||||| ||||| ||||||||| ||||||||||| ||| |||||||| | Sbjct 2093 TCAAAGAGATTATGAAATAGAAAGTTCTGCAACCTCCAACCATGCGATGCCATCCAGAGC 2152 Query 2160 GAGAGTTCAG---TC-T--TCTTCATCTAACCAGGTATATCAATCCCCGATTGTGATTAT 2213 |||||| ||| || | ||||||||||||||||||||||| ||||||||||||||||| Sbjct 2153 GAGAGTCCAGTCTTCTTCATCTTCATCTAACCAGGTATATCAGTCCCCGATTGTGATTAT 2212 Query 2214 GAAACCTGCCAAGCTTGTTGAGAAGGCTGGTATTCCTGCGTCATCCCTTATTCCCATTCA 2273 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2213 GAAACCTGCCAAGCTTGTTGAAAAGGCTGGTATTCCTGCGTCATCCCTTATTCCCATTCA 2272 Query 2274 CAGCCTAACTGGCATCAAGAAGATCCGTAGAGAAAAACCTGATGATAAAGGAACTTCAGC 2333 ||||||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| Sbjct 2273 CAGCCTATCTGGCATTAATAAGATCCGTAGAGAAAAACCTGATGATAAAGAAACTTCAGC 2332 Query 2334 AAGTAATAGTAAACGGGTGACAAAAGATTGTAGTCCTGGAAACCGAAGAGCTGAATCATG 2393 |||| | | ||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 2333 AAGT-A-A-TAAACGGGTGACAAAAGATCGTAGTCCTGGAATCCGAAGAGCTGAATCATG 2389 Query 2394 TACCAGCTCGTTTGATAAGAAATCTGACAGCAGAAATGTGCGGTCTTCTTCAAAAAAGCC 2453 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2390 TACCAGCTCTTTTGATAAGAAATCTGACAGCAGAAATGTGCGGTCTTCTTCCAAAAAGCC 2449 Query 2454 TCAGCAGGTTTCCAAAGAAAGTGCTTCAAAGAGTTCAGGATCTGTAAGTCCAAGATTACA 2513 |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 2450 TCAGCAGGTTTCCAAAGAAAGTACTTCAAAGAGTTCAGGATCTGTTAGTCCAAGATTACA 2509 Query 2514 GCAGAAGAAGCTTGAGTATGATAAGCGTTCACGGCCACCAACCCCTCCTGATTCTAGCAA 2573 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2510 GCAGAAGAAGCTTGAGTATGATAAACGTTCACGGCCACCAACCCCTCCTGATTCTAGCAA 2569 Query 2574 ATCAAGGAAACCGTCAAACCAACAACTTGTGGAATCTACTTCTCCTGGTGGCAGACGTAG 2633 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2570 ATCAAGGAAACCGTCAAACCAACAACTTGTGGAATCTACTTCTCCTGGTGGCAGACGTAG 2629 Query 2634 ACCCAAGGG-TCAGAAGAGTTTGCAGCAAGTTGATGACCAACTTAGTCAAGCAAGCAATG 2692 |||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2630 ACCC-AGGGCTCAGAAGAGTTTGCAGCAAAACGATGACCAACTTAGTCAAGCAAGCAATG 2688 Query 2693 AATCTAGGACGTCAAGTCATGGCATTTGTACTCAATCCGAAACAGAAGCCTCTGCTTGTG 2752 ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| | Sbjct 2689 AATCTAGGACGTCAAGTCATGACATTTGTACTCAATCCGAAACAGAAACTTCTGCTTGGG 2748 Query 2753 TAGAAAAATCTACTGAAGCTGATGGTGGTAAAAGTCCATCTGTAATCGAGGCAGCCAAAG 2812 |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2749 TAGAAAAAGCTACTGAAGCCGATGGTGGTAAAAGTCCATCTGTAATCGAGGCAGCCAAAG 2808 Query 2813 CTGTAGTCTCTAACTTAATGCAGAATAAATCCAGTCCAAGGTTTAGTGAAGATGGATTGT 2872 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2809 CTGTAGTCTCTAACTTAATGCAGAATAAATCCAGTCCAAGGTTTAGTGAAGATGGATTGT 2868 Query 2873 CAGCTAACCTTTCACTAGTTGCTTTGGAACATCCAAGTCCTATTTCTGTTCTCGACGCTT 2932 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2869 CAGCTAACCTTTCACTAGTTGCTTTGGAACATCCAAGTCCTATTTCTGTTCTCGACGCTT 2928 Query 2933 CAACGTACAGAGAGACTGAACCATCACCCGTGAAGACACAAGGTAATGTTGCCCATGATT 2992 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2929 CAACATACAGAGAGACTGAACCATCACCCGTGAAGACACAAGGTAATGTTGCCCATGACT 2988 Query 2993 TTGGTGATGAAAATTGTGAGGACCAGTGGAATCCAGCATACAGTTTCTCAGAAACCACAT 3052 ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2989 TTGGTAATGAACATTGTGAGGACCAGTGGAATCCAGCTTACAGTTTCTCAGAAACCACAT 3048 Query 3053 CAAGCTTTTCGCCAGAGATAAACCGTAAGAAGCTACAGAATGTTGAGCACTTGGTTCAAA 3112 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 3049 CAAGCTTTTCGCCAGAGATAAACCGTAAGAAGCTTCAGAATGTTGAGCACTTAGTTCAAA 3108 Query 3113 AGCTCAGACGATTGAACTCTAGCCATGATGAAGCCAGCCAAGATTATATTGCATCGCTCT 3172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3109 AGCTCAGACGATTGAACTCTAGCCATGATGAAGCCAGCCAAGATTATATTGCATCGCTCT 3168 Query 3173 GTGAGAACGCAGATCCTACCACCGATCATAGATACATTTCTGAGATTCTATTAGCCTCGG 3232 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 3169 GTGAGAACGCAGATCCTACCACCGATCATAGATACATCTCTGAGATTCTATTAGCCTCGG 3228 Query 3233 GTCTTCTCCTAAGAGACCTTGGCTCAGGATTGACAACGTTTCAACTTCACCCTTCTGGCC 3292 |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 3229 GTCTTCTCCTCAGAGACCTTGGCTCAGGATTGACAACTTTTCAACTACACCCTTCTGGCC 3288 Query 3293 ACCCAATCAATCCTGAGCTGTTCTTTGTTCTTGAGCAGACAAAGGGAAGCAGCACTACGC 3352 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3289 ACCCAATCAATCCTGAGCTGTTCTTTGTTCTTGAGCAGACAAAGGGAAGCAGCACTATGC 3348 Query 3353 ATCTGTTACACAAAGAAGAAAGTAAGGTTCTGAAAAATGAGAAGCTCAACCGGAAACTTG 3412 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 3349 ATCTGTTACACAAAGAAGAAAGTAAGGTTCTGAAAAATGAGAAGCTCAACCGAAAACTTG 3408 Query 3413 TGTTTGATCTC-GTTAATGAGATTCTGGTGGAGAAACTAGCGTCAGTTGAAGCCACGACG 3471 ||||||| | | ||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 3409 TGTTTGA-CACCGTTAATGAGATTCTGGTGGAGAAACTAGCTTCAGTTGAAGCCACGGCG 3467 Query 3472 AATCCATTGATGAAGTCATATGCTAAGGTGACTAAGAAAGCCGTGAGTGCGCAACAACTA 3531 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3468 AATCCATTGATGAAGTCATATGCTAAGATGACTAAGAAAGCCGTGAGTGCGCAACAACTG 3527 Query 3532 CTGAAAGAACTGTGTTCAGCGATAGAAACACAGCAAAAGCAAGCCACAAAGAGATCAGAA 3591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3528 CTGAAAGAACTGTGTTCAGCGATAGAAACACAGCAAAAGCAAGCCACAAAGAGATCAGAA 3587 Query 3592 AACTTTTTATTGGAAGAAGAAGACGACTTCTTGAAAAGTATACTTGCTGAAGATGTGACG 3651 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3588 AACTTCTTATTGGAGGAAGAAGACGACTTCTTGAAAAGTATACTTGCTGAAGATGTGAGG 3647 Query 3652 ATTCGATCTGGGAACTGGGCAGACTTCAGTGGAGAAATGTCAGGATTGGTGCTGGATGTT 3711 |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 3648 ATTCGATCTGGGAACTGGGCAGACTTCAGTGGAGAAATCTCAGGATTGGTGCTAGATGTA 3707 Query 3712 GAGAGGCTTGTCTTCAAGGATCTGGTTAATGAAATCGTGCATGCAGAGACAAGCCGTCTG 3771 ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 3708 GAGAGGCTTATCTTTAAGGATCTGGTTAATGAAATCGTGCATGCAGAGACTAGCCATCTG 3767 Query 3772 CAAGCAAAGTCAGGAAGGCGACGAACGCTTTTTGCTGACCAGTAGCTAAGTCTGTTGAAG 3831 ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||| Sbjct 3768 CAAGCAAAGTCAGGAAGGCGAAGAACGCTTTTTGCAGACCAGTAGCTGGGTCTGTTGAAG 3827 Query 3832 AAGACAAAATATATACACAAGTGGTTTCTCT---------AACTCTTTAACTGTGTT--A 3880 |||||||||||||||| ||||| |||||||| ||||||||||||||||| | Sbjct 3828 AAGACAAAATATATACGCAAGTAGTTTCTCTTCTTTCTCTAACTCTTTAACTGTGTTCTA 3887 Query 3881 TGTTTCACTCTGGTCCtttttttCGTCTTTGCTGATTCTTATGGTCGTTCTTGGGTCTTC 3940 | ||||||||||||| ||||||| ||||| ||||||||||||| ||||| |||||||||| Sbjct 3888 TTTTTCACTCTGGTCTTTTTTTT-GTCTT-GCTGATTCTTATGCTCGTTTTTGGGTCTTC 3945 Query 3941 CGTATTCTACAGCAGAATTATAATCATATGGTGTGTTATGTAATTACTGAAGTTCTTGAG 4000 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 3946 TGTATTCTACAGCAGAATAATAATCATATGGTGTGTTATGTAATTACTGAAGTTCTTGAG 4005 Query 4001 ATGGCTACCTAAAGAAAAAACTGTAAAGCGATATAGAAAGAGAATTCATAAAAGAAGAAA 4060 |||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 4006 ATGGCTACCTGGA-AAAAAACTGTAAAGCGATATAGTAAGAGAATTCATAAAAGAAGAAA 4064 Query 4061 GACAACTAATGGAAAATTCTCTGTA 4085 |||| ||||||| || ||||||||| Sbjct 4065 GACAGCTAATGGGAATTTCTCTGTA 4089 > Ahg472083 jgi|Araly1|472083|fgenesh2_kg.1__2037__AT1G18620.2 Length=3295 Score = 130 bits (70), Expect = 9e-29 Identities = 83/89 (93%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 2774 ATGGTGGTAAA-AGTCCATCTGTAATCGAGGCAGCCAAAGCTGTAGTCTCTAACTTAATG 2832 ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2187 ATGGTGG-AAAGAGTCCATCTGTAATAGAGGCAGCCAAAGCTGTAGTCTCTAACTTAATA 2245 Query 2833 CAGAATAAATCCAGTCCAAGGTTTAGTGA 2861 |||||||| |||||||||| ||||||||| Sbjct 2246 CAGAATAAGTCCAGTCCAACGTTTAGTGA 2274 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 154856264537 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5