BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G76030.1 Length=1900 Score E Sequences producing significant alignments: (Bits) Value Ahg476752 jgi|Araly1|476752|fgenesh2_kg.2__1882__AT1G76030.1 2940 0.0 Ahg472256 jgi|Araly1|472256|fgenesh2_kg.1__2210__AT1G20260.2 1912 0.0 Ahg490612 jgi|Araly1|490612|fgenesh2_kg.7__45__AT4G38510.2 1112 0.0 > Ahg476752 jgi|Araly1|476752|fgenesh2_kg.2__1882__AT1G76030.1 Length=1849 Score = 2940 bits (1592), Expect = 0.0 Identities = 1785/1874 (95%), Gaps = 30/1874 (2%) Strand=Plus/Plus Query 16 AGATTTGAGATATGGTCCAACTACGTTCACAGAGAGACTCATAAACCATAActctctctc 75 |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1 AGATTTGAGATATGGTCCAACTACGTTCACAGAGAGACTCGTAAACCATAA--------- 51 Query 76 cctctctccctctctccctctctctctGCTCGAATCGAACCGTTCCCAGGAGCTG-CT-T 133 |||| |||||| ||||||||| ||||||||||| | || |||||| | | | | Sbjct 52 ---CTCT--CTCTCT--CTCTCTCTC--CTCGAATCGAAAC-TTTCCAGGAAC-GTATCT 100 Query 134 TGATTTGGTTTATCGTTGATCTGTGAAAATGGGGACGAATGATCTCGACATCGAAGAAGG 193 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 101 TGATTTGGTTTATCTTTGATCTGTGAAAATGGGGGCGAATGATCTCGACATCGAAGAAGG 160 Query 194 GACTCTGGAGATCGGCATGGAGTATAGAACTGTTTCTGGTGTTGCTGGACCATTGGTCAT 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 161 GACTCTGGAGATCGGCATGGAGTATAGAACTGTTTCTGGTGTTGCTGGACCATTGGTCAT 220 Query 254 TCTTGACAAAGTGAAGGGTCCAAAGTACCAGGAGATTGTTAATATTCGCTTAGGAGATGG 313 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 221 TCTTGATAAAGTGAAGGGTCCAAAGTACCAGGAGATTGTTAATATTCGTTTAGGAGATGG 280 Query 314 ATCAACGAGACGTGGTCAGGTTTTGGAAGTTGATGGCGAGAAAGCAGTTGTGCAGGTTTT 373 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 281 ATCAACGAGACGTGGCCAGGTTTTGGAAGTTGACGGAGAGAAAGCAGTTGTGCAGGTTTT 340 Query 374 TGAAGGAACATCTGGAATTGACAACAAGTTTACAACCGTGCAATTCACAGGAGAGGTTTT 433 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 341 TGAAGGAACATCTGGAATTGACAACAAGTTTACCACCGTGCAATTCACAGGAGAGGTTTT 400 Query 434 GAAAACACCTGTATCATTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAAAGCCGAT 493 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 401 GAAAACTCCTGTGTCATTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAAAGCCGAT 460 Query 494 TGATAATGGCCCTCCTATTCTGCCAGAAGCATACCTTGATATTTCAGGAAGTTCAATCAA 553 ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||| Sbjct 461 TGATAATGGCCCTCCTATTTTGCCAGAGGCATACCTTGATATCTCAGGAAGTTCAATCAA 520 Query 554 CCCCAGTGAAAGAACCTATCCTGAAGAGATGATACAGACAGGCATATCGACCATCGATGT 613 ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct 521 CCCCAGTGAAAGAACCTATCCCGAAGAGATGATACAGACAGGAATTTCCACCATCGATGT 580 Query 614 CATGAATTCCATTGCTCGTGGACAGAAGATTCCACTTTTCTCTGCTGCTGGTCTTCCACA 673 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 581 CATGAATTCCATTGCTCGTGGACAGAAGATTCCGCTTTTCTCTGCTGCTGGTCTTCCACA 640 Query 674 TAATGAAATAGCTGCTCAGATTTGTCGTCAGGCTGGTCTAGTCAAGCGTTTGGAAAAGAC 733 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 641 TAATGAAATAGCTGCTCAGATTTGTCGTCAGGCTGGTCTTGTCAAACGTTTGGAAAAGAC 700 Query 734 TGTTGATCTACTTGAGGATCATGGAGAGGACAATTTTGCAATTGTGTTTGCAGCTATGGG 793 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 701 TGTTGATCTACTTGAGGATCATGGAGAGGACAATTTTGCAATTGTGTTTGCAGCTATGGG 760 Query 794 TGTGAACATGGAGACAGCTCAGTTCTTCAAGCGAGATTTTGAAGAAAATGGATCAATGGA 853 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 761 TGTGAACATGGAGACAGCTCAGTTCTTCAAGCGAGATTTTGAAGAAAATGGATCAATGGA 820 Query 854 GAGAGTTACTCTTTTCCTGAACCTGGCCAATGACCCAACCATTGAGAGAATCATCACTCC 913 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 821 GAGAGTTACTCTTTTCCTGAACCTGGCCAATGACCCAACGATTGAGAGAATCATCACTCC 880 Query 914 TCGAATTGCCCTCACAACAGCTGAATATCTGGCTTATGAATGTGGGAAACACGTCCTTGT 973 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 881 TCGAATTGCCCTCACAACAGCTGAATATCTGGCTTATGAATGTGGGAAACACGTCCTTGT 940 Query 974 TATATTGACGGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTTTCCGCTGCCCGAGA 1033 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 941 TATATTGACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTTTCCGCTGCCCGAGA 1000 Query 1034 AGAGGTTCCCGGAAGACGTGGATATCCAGGTTATATGTACACTGATCTTGCAACTATTTA 1093 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1001 AGAGGTTCCCGGAAGACGTGGATATCCAGGTTATATGTACACTGATCTTGCAACTATTTA 1060 Query 1094 TGAACGTGCTGGGCGTATAGAAGGAAGAAAAGGTTCCATCACCCAAATTCCAATCCTCAC 1153 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 1061 TGAACGTGCTGGGCGTATTGAAGGAAGAAAAGGTTCCATCACCCAAATCCCAATCCTCAC 1120 Query 1154 TATGCCCAATGACGATATCACTCATCCAACTCCGGATCTTACTGGTTACATTACTGAAGG 1213 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1121 TATGCCCAATGACGACATCACTCATCCAACTCCGGATCTTACTGGTTACATTACTGAAGG 1180 Query 1214 TCAGATATATATCGATAGGCAACTTCACAACAGACAGATATATCCACCCATCAACGTGCT 1273 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1181 TCAGATATATATCGATAGGCAACTGCACAACAGACAGATATATCCACCCATCAACGTGCT 1240 Query 1274 TCCATCCCTTTCTCGTTTAATGAAGAGTGCTATCGGCGAGGGCATGACTCGTAAAGACCA 1333 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 1241 TCCATCCCTTTCTCGTTTAATGAAGAGTGCTATTGGCGAGGGCATGACTCGTAAAGATCA 1300 Query 1334 TTCTGATGTGTCGAACCAGCTGTATGCAAATTATGCAATCGGGAAAGATGTTCAAGCGAT 1393 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1301 TTCAGATGTGTCGAACCAGCTGTATGCGAATTATGCAATCGGGAAAGATGTTCAAGCGAT 1360 Query 1394 GAAAGCTGTTGTTGGAGAAGAAGCACTTTCTTCAGAGGATTTGCTTTATCTAGAGTTTTT 1453 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1361 GAAAGCTGTTGTTGGAGAAGAAGCACTTTCTTCAGAGGATCTGCTTTATCTAGAGTTTTT 1420 Query 1454 GGATAAGTTTGAGAGGAAGTTTGTGATGCAAGGAGCTTATGATACACGCAACATCTTCCA 1513 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || || Sbjct 1421 GGATAAGTTTGAGAGGAAGTTTGTAATGCAAGGAGCTTATGACACACGCAACATTTTTCA 1480 Query 1514 GTCGCTGGACTTAGCTTGGACATTGCTCCGTATCTTCCCACGGGAGCTTCTTCATCGTAT 1573 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1481 GTCGCTGGATTTAGCTTGGACATTGCTCCGTATCTTCCCACGGGAGCTTCTTCACCGTAT 1540 Query 1574 CCCTGCAAAGACACTTGACCAATTCTACAGCCGCGACTCAACCAGTTAAAATGAGGTAAT 1633 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1541 CCCTGCAAAGACACTTGACCAATTCTACAGCCGCGACTCAACCACTTAAAATGAGGTAAT 1600 Query 1634 GGAGGTTATCTTATCGAAACTCTTTTGAGAG-AAAAGTGTGAATTTTTGTGATGTGTATT 1692 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||| Sbjct 1601 GGAGGTTATCTTATCGAAACTCTTTTGAGAGGAAAAGTGTGAATTTT-GTGATGTCTATT 1659 Query 1693 ATTTGGTGCTTATTATAAAGAGGAAAAACAAAGAAAAGCTATATATTCTGTGTCTCCCTA 1752 ||||||||| |||| || ||||||||| ||||||| |||||||||||| || ||||| || Sbjct 1660 ATTTGGTGCGTATTTTATAGAGGAAAA-CAAAGAAGAGCTATATATTCCGTCTCTCCATA 1718 Query 1753 TCTGGTGATAttttttttGGTTCTGCATTGTGTTCCAAAGTGGAAATAAAAATCGATAAA 1812 ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| Sbjct 1719 TCTGGTGATATTTTTTTTGGTTCTG--TTGTGTTCCACAGTGAAAATAAAAATCGATAAA 1776 Query 1813 -CGATGTCGTATTGTAGTACTTTCC-TTTTCTTTGTATGAATTTGTTAAGATTGGTTTAT 1870 ||||||||||||||| ||| |||| |||| |||||| ||||||||| || |||||| || Sbjct 1777 ACGATGTCGTATTGTATTACCTTCCCTTTT-TTTGTACGAATTTGTTGAGTTTGGTTCAT 1835 Query 1871 AAATGGGATTATAA 1884 |||||||||||||| Sbjct 1836 AAATGGGATTATAA 1849 > Ahg472256 jgi|Araly1|472256|fgenesh2_kg.1__2210__AT1G20260.2 Length=1872 Score = 1912 bits (1035), Expect = 0.0 Identities = 1332/1478 (90%), Gaps = 9/1478 (1%) Strand=Plus/Plus Query 151 GATCTGTGAAAATGG-GGACGAATGATCTCGACATCGAAGAAGGGACTCTGGAGATCGGC 209 ||||||||| ||||| ||| || || | ||||||| || ||||| ||||| |||||||| Sbjct 88 GATCTGTGACAATGGTGGA-GACTGGTATCGACATGGAGGAAGGAACTCTCGAGATCGGA 146 Query 210 ATGGAGTATAGAACTGTTTCTGGTGTTGCTGGACCATTGGTCATTCTTGACAAAGTGAAG 269 ||||| ||||||||||| || || ||||| ||||| |||||||| ||||||||||||||| Sbjct 147 ATGGAATATAGAACTGTCTCCGGGGTTGCGGGACCCTTGGTCATCCTTGACAAAGTGAAG 206 Query 270 GGTCCAAAGTACCAGGAGATTGTTAATATTCGCTTAGGAGATGGATCAACGAGACGTGGT 329 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 207 GGTCCAAAGTACCAGGAGATTGTTAATATTCGCTTAGGAGATGGATCAACCAGACGTGGT 266 Query 330 CAGGTTTTGGAAGTTGATGGCGAGAAAGCAGTTGTGCAGGTTTTTGAAGGAACATCTGGA 389 ||||| ||||| |||||||| |||||||| ||||| |||||||||||||||||||||||| Sbjct 267 CAGGTCTTGGAGGTTGATGGGGAGAAAGCTGTTGTCCAGGTTTTTGAAGGAACATCTGGA 326 Query 390 ATTGACAACAAGTTTACAACCGTGCAATTCACAGGAGAGGTTTTGAAAACACCTGTATCA 449 ||||||||||||||||| ||||||||||||||||||||||| |||| || ||||| ||| Sbjct 327 ATTGACAACAAGTTTACCACCGTGCAATTCACAGGAGAGGTACTGAAGACGCCTGTTTCA 386 Query 450 TTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAAAGCCGATTGATAATGGCCCTCCT 509 |||||||||||||| || ||||||||||| ||||||||||| ||||| |||||||||||| Sbjct 387 TTGGACATGCTTGGCCGTATATTTAACGGCTCAGGAAAGCCAATTGACAATGGCCCTCCT 446 Query 510 ATTCTGCCAGAAGCATACCTTGATATTTCAGGAAGTTCAATCAACCCCAGTGAAAGAACC 569 ||| ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 447 ATTTTGCCAGAGGCATACCTTGATATTTCGGGTAGTTCAATCAACCCCAGTGAAAGAACC 506 Query 570 TATCCTGAAGAGATGATACAGACAGGCATATCGACCATCGATGTCATGAATTCCATTGCT 629 || ||||||||||||||||| || || || || ||||| ||||||||||| ||||||||| Sbjct 507 TACCCTGAAGAGATGATACAAACGGGGATTTCTACCATTGATGTCATGAACTCCATTGCT 566 Query 630 CGTGGACAGAAGATTCCACTTTTCTCTGCTGCTGGTCTTCCACATAATGAAATAGCTGCT 689 ||||||||||||||||| |||||||||||||||||||| || ||||| || || |||||| Sbjct 567 CGTGGACAGAAGATTCCTCTTTTCTCTGCTGCTGGTCTACCTCATAACGAGATTGCTGCT 626 Query 690 CAGATTTGTCGTCAGGCTGGTCTAGTCAAGCGTTTGGAAAAGACTGTTGATCT-ACTT-- 746 || ||||||||||||||||| || || ||||| ||||| ||||||| || || | || Sbjct 627 CAAATTTGTCGTCAGGCTGGACTTGTGAAGCGGTTGGAGAAGACTGA-GAACTTAATTCA 685 Query 747 G-AGGATCATGGAGAGGACAATTTTGCAATTGTGTTTGCAGCTATGGGTGTGAACATGGA 805 | ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 686 GGAGGATCATGGAGAGGACAATTTTGCAATTGTTTTTGCAGCTATGGGTGTAAACATGGA 745 Query 806 GACAGCTCAGTTCTTCAAGCGAGATTTTGAAGAAAATGGATCAATGGAGAGAGTTACTCT 865 ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| || Sbjct 746 GACAGCTCAGTTCTTCAAGCGCGATTTTGAAGAAAATGGATCGATGGAAAGAGTTACCCT 805 Query 866 TTTCCTGAACCTGGCCAATGACCCAACCATTGAGAGAATCATCACTCCTCGAATTGCCCT 925 |||| |||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct 806 TTTCTTGAACCTGGCTAATGACCCAACCATCGAGAGAATTATCACTCCTCGAATTGCCCT 865 Query 926 CACAACAGCTGAATATCTGGCTTATGAATGTGGGAAACACGTCCTTGTTATATTGACGGA 985 ||||| ||||||||| ||||||||||||||||||| || || |||||||||||||| || Sbjct 866 TACAACCGCTGAATATTTGGCTTATGAATGTGGGAAGCATGTGCTTGTTATATTGACAGA 925 Query 986 TATGAGTTCTTATGCTGATGCTCTTCGTGAGGTTTCCGCTGCCCGAGAAGAGGTTCCCGG 1045 |||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| || Sbjct 926 CATGAGTTCTTATGCAGATGCTCTTCGTGAGGTTTCTGCTGCTCGAGAAGAAGTTCCTGG 985 Query 1046 AAGACGTGGATATCCAGGTTATATGTACACTGATCTTGCAACTATTTATGAACGTGCTGG 1105 |||||||||||||||||| |||||||| || ||||||||||||||||| |||||||| || Sbjct 986 AAGACGTGGATATCCAGGGTATATGTATACAGATCTTGCAACTATTTACGAACGTGCAGG 1045 Query 1106 GCGTATAGAAGGAAGAAAAGGTTCCATCACCCAAATTCCAATCCTCACTATGCCCAATGA 1165 ||||| ||||||||||| |||||||| |||||||| || ||||| |||||||||||||| Sbjct 1046 ACGTATTGAAGGAAGAAAGGGTTCCATTACCCAAATCCCTATCCTGACTATGCCCAATGA 1105 Query 1166 CGATATCACTCATCCAACTCCGGATCTTACTGGTTACATTACTGAAGGTCAGATATATAT 1225 |||||||| || || ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 1106 TGATATCACCCACCCTACTCCGGATCTTACTGGTTACATCACTGAGGGTCAGATATATAT 1165 Query 1226 CGATAGGCAACTTCACAACAGACAGATATATCCACCCATCAACGTGCTTCCATCCCTTTC 1285 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1166 TGATAGGCAACTTCACAACAGACAGATATATCCACCCATCAACGTGCTTCCATCACTTTC 1225 Query 1286 TCGTTTAATGAAGAGTGCTATCGGCGAGGGCATGACTCGTAAAGACCATTCTGATGTGTC 1345 ||| ||||||||||||||||| || || || |||||||| |||||||||||||||||||| Sbjct 1226 TCGATTAATGAAGAGTGCTATTGGTGAAGGAATGACTCGCAAAGACCATTCTGATGTGTC 1285 Query 1346 GAACCAGCTGTATGCAAATTATGCAATCGGGAAAGATGTTCAAGCGATGAAAGCTGTTGT 1405 |||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1286 CAACCAGCTATACGCAAATTATGCAATCGGGAAAGATGTTCAAGCCATGAAAGCTGTTGT 1345 Query 1406 TGGAGAAGAAGCACTTTCTTCAGAGGATTTGCTTTATCTAGAGTTTTTGGATAAGTTTGA 1465 |||||||||||| |||||||| |||||| |||| ||| | |||||| | ||||| ||||| Sbjct 1346 TGGAGAAGAAGCTCTTTCTTCTGAGGATCTGCTGTATTTGGAGTTTCTAGATAAATTTGA 1405 Query 1466 GAGGAAGTTTGTGATGCAAGGAGCTTATGATACACGCAACATCTTCCAGTCGCTGGACTT 1525 ||||||||||||||||||||| || ||||||||| | ||||||||||||||||| ||||| Sbjct 1406 GAGGAAGTTTGTGATGCAAGGCGCATATGATACAAGAAACATCTTCCAGTCGCTTGACTT 1465 Query 1526 AGCTTGGACATTGCTCCGTATCTTCCCACGGGAGCTTCTTCATCGTATCCCTGC-AAAGA 1584 || |||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||| | Sbjct 1466 GGCATGGACATTGCTCCGTATCTTCCCACGTGAGCTTCTTCACCGTATTCCTGCCAAA-A 1524 Query 1585 CACTTGACCAATTCTACAGCCGCGACTCAACCAGTTAA 1622 ||||||| |||||||||||||| ||||| || || ||| Sbjct 1525 CACTTGATCAATTCTACAGCCGTGACTCCACAAGCTAA 1562 > Ahg490612 jgi|Araly1|490612|fgenesh2_kg.7__45__AT4G38510.2 Length=1835 Score = 1112 bits (602), Expect = 0.0 Identities = 1181/1458 (81%), Gaps = 49/1458 (3%) Strand=Plus/Plus Query 191 AGGG-ACTCTGGAGATCGGCATGGAGTATAGAACTGTTTCTGGTGTTGCTGGACCAT-TG 248 |||| || ||||||||||||||||||||||||||||| ||||||||||| || || | | Sbjct 76 AGGGTACCCTGGAGATCGGCATGGAGTATAGAACTGTCTCTGGTGTTGCCGGCCC-TCTC 134 Query 249 GTCATTCTTGACAAAGTGAAGGGTCC-AAAGTACCAGGAGATTGTTAATATTCG-CTTAG 306 ||||| ||||| ||||| ||||| || ||| ||||| || ||||| ||||| || ||| | Sbjct 135 GTCATCCTTGAAAAAGTCAAGGGCCCTAAA-TACCAAGAAATTGTCAATATCCGTCTTGG 193 Query 307 GAGATGGATCAACGAGACGTGGTCAGGTTTTGGAAGTTGATGGCGAGAAAGCAGTTGTGC 366 | |||||| | || |||||||||| ||| | ||||||||||| |||||||| ||||| | Sbjct 194 G-GATGGAACTACCCGACGTGGTCAAGTTCTCGAAGTTGATGGAGAGAAAGCTGTTGTTC 252 Query 367 AGGTTTTTGAAGGAACATCTGGAATTGACAACAAGTTTACAACCGTGCAATTCACAGGAG 426 |||| ||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct 253 AGGTATTTGAGGGAACATCTGGAATTGACAACAAGTACACAACTGTGCAATTTACAGGAG 312 Query 427 AGGTTTTGAAAACACCTGTATCATTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAA 486 ||||||||||||| ||||| || ||||| |||||||| ||||| || || |||||||| | Sbjct 313 AGGTTTTGAAAACTCCTGTTTCTTTGGATATGCTTGGTCGCATCTTCAATGGTTCAGGGA 372 Query 487 AGCCGATTGATAATGGCCCTCCTAT-TCTGCCAGAAGCATACCTTG-ATATTTCAGGAAG 544 |||| ||||| ||||| || ||||| | |||| || |||||| ||| ||||||| ||||| Sbjct 373 AGCCCATTGACAATGGTCCACCTATAT-TGCCCGAGGCATAC-TTGGATATTTCTGGAAG 430 Query 545 TTCAATCAACCCCAGTGAAAGAACCTATCCTGAAGAGATGATACAGACAGGCATATCGAC 604 ||| ||||| |||||||| ||||||||||||||||||||||| ||||| || ||||| || Sbjct 431 TTCTATCAATCCCAGTGAGAGAACCTATCCTGAAGAGATGATTCAGACGGGGATATCCAC 490 Query 605 CATCGATGTCATGAATTCCATTGCTC-GTGGACAGAAGATTCCACT-TTTCTCTGCTGCT 662 ||| ||||||||||| || || || | | |||||||||||||| || ||| |||||||| Sbjct 491 CATTGATGTCATGAACTCTATCGC-CAGAGGACAGAAGATTCCCCTCTTT-TCTGCTGCA 548 Query 663 GGTCTTCCACATAATGAAATAGCTGCTCAGATTTGTCGTCAGGCTGGTCTAGTCAAGCGT 722 |||||||| || |||||||| |||||||||||||| |||||||||||| | || |||||| Sbjct 549 GGTCTTCCCCACAATGAAATTGCTGCTCAGATTTGCCGTCAGGCTGGTTTGGTTAAGCGT 608 Query 723 TTGGAAAAGACTGTTGATCTACTTGAGGATCATGGAG-AGGACAATTTTGCAATTGTGTT 781 || || ||| | | | |||| || ||| | || | || | || || || || |||||||| Sbjct 609 TTAGAGAAGTCGGATAATCTCCTCGAGCACCAAG-AGGATGATAACTTCGCCATTGTGTT 667 Query 782 TGCAGCTATGGGTGTGAACATGGAGACAGCTCAGTTCTTCAAGCGAGATTTTGAAGAAAA 841 ||||| |||||||||||||||||||| || || || || || || ||||| || || || Sbjct 668 CGCAGCAATGGGTGTGAACATGGAGACTGCGCAATTTTTTAAACGTGATTTCGAGGAGAA 727 Query 842 TGGATCAATGGAGAGAGTTACTCTTTTCCTGAACCTGGC----C----A--AT--GACCC 889 ||| || ||||||||||| ||||||||||| ||| |||| | | | ||||| Sbjct 728 TGGGTCGATGGAGAGAGTGACTCTTTTCCTTAACTTGGCAAGTCTCGCAGCAAACGACCC 787 Query 890 AACCATTGAGAGAATCATCACTCCTCGAATTGCCCTCACAACAGCTGAATATCT-GGCTT 948 || |||||| | |||||||||||||| ||||| || ||||| ||||| || || ||| | Sbjct 788 CACTATTGAGCGTATCATCACTCCTCGTATTGCTCTTACAACGGCTGAGTA-CTTGGCAT 846 Query 949 ATGAATGTGGGAAACACGTCCTTGTTATAT-TGACGGATATGAGTTCTTATGCTGATGCT 1007 |||||||||| || || |||||||| || | | || || |||||||| || ||||||||| Sbjct 847 ATGAATGTGGCAAGCATGTCCTTGTCAT-TCTCACAGACATGAGTTCCTACGCTGATGCT 905 Query 1008 CTTCGTGAGGTTTCCGCTGCCCGAGAAGAGGTTCCCGGAAGACGTGGATATCCAGGTTAT 1067 ||||||||||| || |||||||| ||||| || || ||||| ||||| || |||||||| Sbjct 906 CTTCGTGAGGTCTCTGCTGCCCGTGAAGAAGTGCCTGGAAGGCGTGGTTACCCAGGTTAC 965 Query 1068 ATGTACACTGATCTTG-CAACTATTTATGA-ACGTGCTGGGCGTATAGAAGGAAGAAAAG 1125 |||||||| || |||| | ||||| || || | | || ||||| || |||||||| |||| Sbjct 966 ATGTACACCGA-CTTGGCTACTATATACGAGA-GAGCGGGGCGAATTGAAGGAAGGAAAG 1023 Query 1126 GTTCCATCACCCAAATTCCAATCCTCACTATGCCCAATGACGATATCACTCATCCAACTC 1185 |||||||||| |||||||| || | || ||||| || || |||||||| ||||| || | Sbjct 1024 GTTCCATCACTCAAATTCCCATTTTAACCATGCCAAACGATGATATCACACATCCCACAC 1083 Query 1186 CGGATCTTACTGGTTACATTACTGAAGGTCAGATATATATCGATAGGCAACTTCACAACA 1245 ||||||| || || |||||||| || || || || ||||| || | ||||||||||| | Sbjct 1084 CGGATCTGACAGGATACATTACAGAGGGCCAAATCTATATTGACCGACAACTTCACAATA 1143 Query 1246 GACAGATATATCCACCCATCAACGTGCTT-CCATCCCTTTCTCGT-TTAATGAAGAGTGC 1303 |||||||||| || || ||||| || ||| ||||| || |||||| ||| |||||||||| Sbjct 1144 GACAGATATACCCTCCGATCAATGT-CTTGCCATCTCTGTCTCGTCTTA-TGAAGAGTGC 1201 Query 1304 TATCGGCGAGGGCATGACTCGTAAAGACCATTCTGATGTGTCGAACCAGCTGTATGCAAA 1363 || || ||||| |||||||| | ||||| |||||||| || || || ||||||| || Sbjct 1202 CATTGGTGAGGGTATGACTCGCAGGGACCACTCTGATGTTTCTAATCAATTGTATGCCAA 1261 Query 1364 TTATGCAATCGGGAAAG-ATGTTCAAGCGATGAAAGCTGTTGTTGGAGAAGAAGCACTTT 1422 || || || || |||| | || || || |||||||| || |||||||||||||| |||| Sbjct 1262 CTACGCTATTGG-AAAGGACGTCCAGGCCATGAAAGCCGTGGTTGGAGAAGAAGCTCTTT 1320 Query 1423 CTTCAGAGGATTTGCTTTATCTAGAGTTTTTGGATAAGTTTGAGAGGAAGTTTGTGA-TG 1481 |||| |||||| |||| ||||| ||||| ||||| ||||| ||||||||||||||| | Sbjct 1321 CTTCCGAGGATCTGCTATATCTGGAGTTCTTGGACAAGTTCGAGAGGAAGTTTGTGGCT- 1379 Query 1482 CAAGGAGCTTATGATACACGCAACATCTTCCAGTCGCTGGACTTAGCTTGGACATTGCTC 1541 || |||||||| ||||| || || ||||||||||| || ||| | || |||||| | || Sbjct 1380 CAGGGAGCTTACGATACCCGGAATATCTTCCAGTCACTCGACCTGGCATGGACACTCCTG 1439 Query 1542 CGTATCTTCCCACGGGAGCTT-CTTCATCGTATCCCTGC-AAAGACACTTGACCAATTCT 1599 || |||||||| || ||| || ||||| ||||| || || ||| || ||||| || || | Sbjct 1440 CGAATCTTCCCCCGTGAG-TTGCTTCACCGTATACCGGCGAAA-ACCCTTGATCAGTTTT 1497 Query 1600 ACAGCCGCGACTCAACCA 1617 ||||||||||| | |||| Sbjct 1498 ACAGCCGCGACACCACCA 1515 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71381119130 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5