BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G77580.2 Length=2768 Score E Sequences producing significant alignments: (Bits) Value Ahg476922 jgi|Araly1|476922|fgenesh2_kg.2__2052__AT1G77580.2 3707 0.0 Ahg927190 jgi|Araly1|927190|scaffold_202751.1 163 6e-39 Ahg472419 jgi|Araly1|472419|fgenesh2_kg.1__2373__AT1G21810.1 84.2 5e-15 > Ahg476922 jgi|Araly1|476922|fgenesh2_kg.2__2052__AT1G77580.2 Length=2717 Score = 3707 bits (2007), Expect = 0.0 Identities = 2547/2792 (91%), Gaps = 99/2792 (4%) Strand=Plus/Plus Query 1 CAAAAAACAAGATAAAGAGAATtctctcttctctctctctctctctctctcACGCTATAT 60 |||| ||||||||||||||||||||||| ||||||||||||||||||||| || || | | Sbjct 1 CAAAGAACAAGATAAAGAGAATTCTCTC-TCTCTCTCTCTCTCTCTCTCTAACTCT-T-T 57 Query 61 CTCTGCCTTGTCGCTGTTAATAAATCGTAATAGTGTTTCAGACAGTAGTAGAAGAAGAAG 120 ||||||||||||||||||||| ||||||||||||||||||| || | || |||||||| Sbjct 58 CTCTGCCTTGTCGCTGTTAAT-AATCGTAATAGTGTTTCAG--AG-A-CAGTAGAAGAAG 112 Query 121 AAAGCTTCTTCCTTTTTGCTTGTTTAATCGCTGAtttttttttGTTTCCATTGGGGCATT 180 |||||||||||| ||| || ||| | | | | |||||||||||||| Sbjct 113 AAAGCTTCTTCC--TTT--TT-TTT--T-G-T-A------------TCCATTGGGGCATT 150 Query 181 TTGGGATCTCAAAGTTCTT--CATACAGTCCCCAAC-CA-AAAGATCCTGAGACTGTTAT 236 || ||||||| |||||||| || | ||| | | | || ||||| | ||||||||| Sbjct 151 TTCGGATCTCTAAGTTCTTACCA-AAAGT-CTC-TCTCATTCAGATCAT-TGACTGTTAT 206 Query 237 GTGCTGATTGTGATCTTGGAAACTATAAATGGAGAAAAGGAAGAGAGAATCATCTGAGAG 296 ||||||||||||||||||||| ||| |||||||| || |||||||||||||||||||||| Sbjct 207 GTGCTGATTGTGATCTTGGAAGCTAGAAATGGAGGAACGGAAGAGAGAATCATCTGAGAG 266 Query 297 AAGCTTTGGTGAATC---AGAGTCTGTGTCTTCACTAT-C-TG-AGAAGGATTCTGAAAT 350 ||||||||||||||| |||||||||||||||||||| | | |||||||||||||||| Sbjct 267 AAGCTTTGGTGAATCAGAAGAGTCTGTGTCTTCACTATCCGAGAAGAAGGATTCTGAAAT 326 Query 351 TCAACCTGAGAGTACAATGGAGTCTC--G-TGATGACGAGAT---ACAATCACCAACGGT 404 |||||||||||||||||||||||||| | |||||| ||||| ||||||||||||||| Sbjct 327 TCAACCTGAGAGTACAATGGAGTCTCATGATGATGATGAGATACAACAATCACCAACGGT 386 Query 405 TTCTTTGGAAGTAGAAACTGAAAAGGAAGAGTTGAAAGATAGCATGAAGACTTTAGCCGA 464 |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||| Sbjct 387 TTCTTTGGAAGTCGAAACTGAAAATGAAGATTTGAAAGATAGCATGAAGACTTTAACCGA 446 Query 465 GAAACTTTCAGCTGCTCTTGCTAATGTGAGTGCTAAAGATGATCTAGTGAAGCAACATGT 524 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 447 GAAACTTTCAGCTGCTCTTGCTAATGCGAGTGCTAAAGATGATCTGGTGAAGCAACATGT 506 Query 525 CAAAGTCGCTGAAGAAGCTGTCGCTGGGTGGGAGAAAGCTGAAAATGAAGTGGTTGAGTT 584 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 507 CAAAGTCGCAGAAGAAGCTGTCGCTGGGTGGGAGAAAGCTGAAAATGAAGTGGTTGAGTT 566 Query 585 AAAGGAGAAGCTTGAGGCTGCTGATGATAAGAATAGAGTGTTGGAAGATAGAGTAAGCCA 644 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 567 GAAGGAGAAGCTCGAGGCTGCTGATGATAAGAATAGAGTGTTGGAAGATAGAGTAAGCCA 626 Query 645 TCTTGATGGAGCT-TTAAAGGAGTGTGTGAGACAGTTAAGGCAAGCAAGAGATGAACAAG 703 ||| ||||||||| || ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 627 TCTCGATGGAGCTCTT-AAGGAGTGTGTTAGACAGTTAAGGCAAGCAAGAGATGAACAAG 685 Query 704 AACAGAGAATTCAAGATGCTGTGATCGAGAGAACTCAGGAGTTGCAGTCTTCT-AGAACC 762 ||||||||||||||||||| |||||||||||||| |||||||||||||||||| | |||| Sbjct 686 AACAGAGAATTCAAGATGCCGTGATCGAGAGAACCCAGGAGTTGCAGTCTTCTCA-AACC 744 Query 763 AGCCTTGAGAACCAGATTTTTGAAACTGCAACCAAGTCTGAGGAGCTTAGCCAAATGGCG 822 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 745 AGCCTTGAGAACCAGATTCTTGAAACTGCAACCAAGTCTGAGGAGCTTAGCCAAATGGCG 804 Query 823 GAATCTGTGGCGAAAGAAAACGTGATGCTTAGACACGAGCTTCTTGCGCGATGCGAAGAG 882 || |||||||| || ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct 805 GAGTCTGTGGCTAAGGAAAATGTGATGCTGAGACACGAGCTTCTTGCACGATGCGAAGAG 864 Query 883 CTAGAGATCAGAACTATTGAGAGGGATTTGAGTACCCAAGCAGCTGAAACCGCCAGCAAG 942 |||||||||||||| ||||||||||||||||| || |||||||||||||| || |||||| Sbjct 865 CTAGAGATCAGAACAATTGAGAGGGATTTGAGCACTCAAGCAGCTGAAACAGCTAGCAAG 924 Query 943 CAGCAGTTAGATAGCATAAAGAAAGTGGCGAAACTTGAGGCTGAGTGCAGGAAGTTTCGG 1002 || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 925 CAACAGTTAGATAGCATAAAGAAAGTGGCGAAACTTGAGGCTGAGTGCAGGAAGCTTCGG 984 Query 1003 ATGTTGGCTAAGTCATCAGCTTCGTTTAACGATCATCGATCTACAGATAGTCATTCTGAT 1062 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 985 ATGTTGGCTAAGTCATCAGCTTCGTTTAACGATCATCGATCTACAGATAGTCATTCTGAT 1044 Query 1063 GGAGGGGAACGAATGGATGTGAGTTGCTCTGATTCATGGGCATCATCCACATTGATTGAG 1122 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1045 GGAGGGGAACGAATGGATGTGAGTTGCTCTGAGTCATGGGCATCATCCACATTGATTGAA 1104 Query 1123 AAGAGAAGCCTTCAGGGAACTTCCTCTTCCATTGAACTTGATCTCATGGGTGATTTTCTT 1182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1105 AAGAGAAGCCTTCAGGGAACTTCCTCTTCCATTGAACTTGATCTCATGGGTGATTTTCTT 1164 Query 1183 GAGATGGAACGTCTTGTAGCATTGCCTGAGACGCCAGATGGGAACGGTAAGAGTGGACCT 1242 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 1165 GAGATGGAACGTCTTGTAGCATTGCCCGAGACACCAGATGGGAACGGTAAGAGTGGACCT 1224 Query 1243 GAATCAGTTACAGAAGAGGTTGTTGTTCCCTCAGAGAACTCGTTAGCTTCTGAAATAGAA 1302 |||||||||||||| ||| |||||||| |||||||||||||| ||| ||||||||||| Sbjct 1225 GAATCAGTTACAGAGGAGACTGTTGTTCATTCAGAGAACTCGTTGGCTGCTGAAATAGAA 1284 Query 1303 GTACTGACTTCTCGCATTAAGGAACTTGAAGAGAAGTTGGAAAAGTTAGAAGCCGAGAAA 1362 ||| |||||||||| | |||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1285 GTATTGACTTCTCGAACTAAGGAGCTTGAAGAGAAGTTGGAAAAGTTAGAAGCTGAGAAA 1344 Query 1363 CATGAGCTCGAGAATGAAGTTAAATGTAACAGAGAAGAGGCTGTTGTTCATATAGAGAAC 1422 ||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1345 CATGAGCTCGAAAAGGAAGTTAAATGTAACAGAGAAGAGGCTGTTGTTCATGTAGAGAAC 1404 Query 1423 TCAGAAGTACTGACTTCTCGAACTAAGGAACTTGAAGAAAAGTTGGAAAAGTTAGAAGCA 1482 |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 1405 TCAGAAGTACTGACTTCTCGAATTAAGGAACTTGAAGAGAAGTTGGAAAAGTTAGAAGCG 1464 Query 1483 GAGAAAGAGGAGCTC-AAAAGTGAAGTTAAATGTAACAGAGAAAAGGCTGTTGTTCACGT 1541 |||||| | ||||| |||| |||| ||||| ||||||||||| |||||||||||||||| Sbjct 1465 GAGAAAAATAAGCTCGAAAA-TGAATTTAAAGGTAACAGAGAAGAGGCTGTTGTTCACGT 1523 Query 1542 AGAGAACTCATTGGCTGCTGAAATAGAAGTACTGACTTCTCGAACTAAGGAACTTGAAGA 1601 ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 1524 AGAGAACTCGTTGGCTGCTGAAATAGAAGTATTGACTTCTCGAACAAAGGAACTTGAAGA 1583 Query 1602 ACAGTTGGAGAAGTTAGAAGCGGAGAAAGTTGAACTCGAAAGTGAAGTAAAATGTAACAG 1661 ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| Sbjct 1584 ACAGTTGGAGAAGTTAGAAGCGGAGAAAGATGAGCTCGAAAGTGAAGTTAAATGTAACAG 1643 Query 1662 AGAAGAGGCTGTTGCTCAAGTAGAGAACTCGTTGGCTACTGAAATAGAAGTATTGACTTG 1721 |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| Sbjct 1644 AGAAGAGGCTGTTGCTCACGTAGAGAACTGGTTGGCTGCTGAAATAGAAGTATTGACTTG 1703 Query 1722 CCGAATCAAGCAACTTGAGGAGAAGTTAGAGAAGTTGGAAGTAGAGAAAGATGAGCTCAA 1781 |||||| |||||||||||||| |||||| ||||||||||| |||||||||||||||||| Sbjct 1704 CCGAATTAAGCAACTTGAGGAAAAGTTATCGAAGTTGGAAGCAGAGAAAGATGAGCTCAA 1763 Query 1782 AAGTGAAGTTAAATGTAACAGGGAAGTGGAGAGCACATTGAGATTTGAGCTCGAAGCTAT 1841 | ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1764 ATGTGAAGTTAGATGTAACAGAGAAGTGGAGAGCACATTGAGATTTGAGCTCGAAGCTAT 1823 Query 1842 TGCTTGTGAAAAAATGGAGCTGGAAAATAAGTTGGAGAAGTTGGAAGTTGAGAAAGCTGA 1901 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1824 TGCTTGTGATAAAATGGAGCTGGAAAATAAGTTGGAGAAGTTGGAGGTTGAGAAAGCTGA 1883 Query 1902 GCTGCAAATATCTTTTGACATAATCAAAGATAAATATGAAGAATCTCAAGTTTGTCTGCA 1961 ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| Sbjct 1884 GCTGCAAATATCTTTTGACATAATCAAAGATAAGTATAAAGAATCTCAAGTTTGTTTGCA 1943 Query 1962 AGAAATCGAGACGAAGCTGGGGGAGATACAAACGGAGATGA-AACTCGTTAACGAACTAA 2020 |||||| ||||||||| ||| |||||||||||||||||| | || | | ||||||||||| Sbjct 1944 AGAAATTGAGACGAAGTTGGAGGAGATACAAACGGAGATAAGAA-TGGCTAACGAACTAA 2002 Query 2021 AAGCTGAAGTAGAGTCTCAAACCATCGCAATGGAAGCA-GATGCAAAGACTAAATCCGCA 2079 |||| |||||||| ||||||| |||| | ||||||| | || ||||||||||||||| || Sbjct 2003 AAGCAGAAGTAGAATCTCAAATCATCTCCATGGAAG-ATGAGGCAAAGACTAAATCCACA 2061 Query 2080 AAGATTGAATCTTTGGAAGAAGACATGAGAAAGGAGAGGTTTGCTTTTGATGAGCTTAGG 2139 ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 2062 AAGATCAAATCTTTGGAAGAAGAAATGAGAAAGGAGAGGATTGCTTTTGATGAGCTTAGG 2121 Query 2140 AGAAAATGTGAGGCTCTTGAAGAAGAGATCTCTCTCCATAAAGAGAACTCAATCAAGAGT 2199 ||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| Sbjct 2122 AGAAAATGTGAGGCTCTTGAACAAGAGATATCTCTGCATAAAGAGAACTCAATCAAGAGT 2181 Query 2200 GAAAATAAAGAACCCAAGATCAAACAGGAAGACATAGAAACAGCTGCAGGGAAACTTGCG 2259 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2182 GAAAATAAAGAACCAAAGATCAAACAGGAAGACATAGAAACAGCTGCAGGGAAACTTGCG 2241 Query 2260 AATTGTCAGAAAACAATAGCTTCATTGGGGAAACAG-TTGCAGTCCCTTGCAACACTTGA 2318 ||||||||||||||||||||||| ||||| |||||| || || || |||||||||||||| Sbjct 2242 AATTGTCAGAAAACAATAGCTTCGTTGGGAAAACAGCTT-CAATCTCTTGCAACACTTGA 2300 Query 2319 AGATTTCTTAACCGATACACCGA-TAATTCCAATGGCTGCAAATGGTGTAAGCAGCAGCA 2377 ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| | Sbjct 2301 AGATTTCTTAACCGATACACCGAGTA-TTCCAATGGCTGCAAATGGTGTAAGCAGCA--A 2357 Query 2378 GCAACTCAGAGAGTTGGAAGGTTCACAAAAACGAAACTTTCATGACAAGAAATCATCCTG 2437 | || ||||||||||| ||||||||| ||||||||||||||| | ||||| || || | Sbjct 2358 -C--CT-AGAGAGTTGGAGGGTTCACAAGAACGAAACTTTCATGGCGAGAAACCAACCCG 2413 Query 2438 AGTCCATCAAACCAACCAAAGAAACATCTCCATCTTCTTCTTCTTCTACTGCGTCTGCTG 2497 |||| |||||| ||||||| ||||||||||| | ||| |||||||| | ||| |||||| Sbjct 2414 AGTCAATCAAATCAACCAAGGAAACATCTCCGTGTTCCTCTTCTTC--C-GCGGCTGCTG 2470 Query 2498 CTGTTTCAATGCCAGTTTCAACAAACCGAGGGAGTTCTGAGAAGAATCGCAATGGATTTG 2557 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2471 CTGTTTCAATGCCAGTTTCAACGAACCGAGGGAGTTCTGAGAAGAATCGCAATGGATTTG 2530 Query 2558 CAACAGTATTCACAAGAAGTAAAGACGGTATCCATCTGGCTATATAACATAACTTTGGCA 2617 ||||||||||||||||||||||||||||||||||||| || || || ||||||||||||| Sbjct 2531 CAACAGTATTCACAAGAAGTAAAGACGGTATCCATCTAGCAATTTAGCATAACTTTGGCA 2590 Query 2618 GAGTAGGCAGAGAAACTTATCTCTTAGGGTTTAAAAAGGATCCGTTTTTAACA-CCACTT 2676 | || | |||||||| ||||||| ||||| |||||||||| |||||| Sbjct 2591 G--TA-----------T---CTCTTAGG-TTTAAAA-GGATC-GTTTTTAACAACCACTT 2631 Query 2677 TGTTCCCTTTTCCAGATTTTGAATCCATAGTAGTAGTTTTAAAAGTTAATCTCTAGTGTA 2736 |||||| ||||||||||||||||||| | ||||||||| ||||| |||||||||||||| Sbjct 2632 TGTTCCTTTTTCCAGATTTTGAATCC-T--TAGTAGTTT-AAAAGATAATCTCTAGTGTA 2687 Query 2737 ATGCAGTGGATGGATATTCCATAAAAGATGTT 2768 |||| || | ||||||||||||||||| ||| Sbjct 2688 ATGC--TGCAGGGATATTCCATAAAAGAAGTT 2717 Score = 399 bits (216), Expect = 4e-110 Identities = 332/385 (86%), Gaps = 19/385 (5%) Strand=Plus/Plus Query 1299 AGAAGTACTGACTTCTCGCATTAAGGAACTTGAAGAGAAGTTGGAAAAGTTAGAAGCCGA 1358 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 1407 AGAAGTACTGACTTCTCGAATTAAGGAACTTGAAGAGAAGTTGGAAAAGTTAGAAGCGGA 1466 Query 1359 GAAACATGAGCTCGAGAATGAAGTTAAATGTAACAGAGAAGAGGCTGTTGTTCATATAGA 1418 |||| || ||||||| |||||| ||||| ||||||||||||||||||||||||| |||| Sbjct 1467 GAAAAATAAGCTCGAAAATGAATTTAAAGGTAACAGAGAAGAGGCTGTTGTTCACGTAGA 1526 Query 1419 GAACTC-----------A----GAAGTACTGACTTCTCGAACTAAGGAACTTGAAGAAAA 1463 |||||| | |||||| ||||||||||||| ||||||||||||||| | Sbjct 1527 GAACTCGTTGGCTGCTGAAATAGAAGTATTGACTTCTCGAACAAAGGAACTTGAAGAACA 1586 Query 1464 GTTGGAAAAGTTAGAAGCAGAGAAAGAGGAGCTCAAAAGTGAAGTTAAATGTAACAGAGA 1523 |||||| ||||||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct 1587 GTTGGAGAAGTTAGAAGCGGAGAAAGATGAGCTCGAAAGTGAAGTTAAATGTAACAGAGA 1646 Query 1524 AAAGGCTGTTGTTCACGTAGAGAACTCATTGGCTGCTGAAATAGAAGTACTGACTT-CTC 1582 | ||||||||| |||||||||||||| ||||||||||||||||||||| |||||| | | Sbjct 1647 AGAGGCTGTTGCTCACGTAGAGAACTGGTTGGCTGCTGAAATAGAAGTATTGACTTGC-C 1705 Query 1583 GAACTAAGGAACTTGAAGAACAGTTGGAGAAGTTAGAAGCGGAGAAAGTTGAACTCGAAA 1642 ||| |||| ||||||| ||| |||| |||||| ||||| ||||||| ||| ||| ||| Sbjct 1706 GAATTAAGCAACTTGAGGAAAAGTTATCGAAGTTGGAAGCAGAGAAAGATGAGCTC-AAA 1764 Query 1643 -GTGAAGTAAAATGTAACAGAGAAG 1666 ||||||| | |||||||||||||| Sbjct 1765 TGTGAAGTTAGATGTAACAGAGAAG 1789 Score = 243 bits (131), Expect = 7e-63 Identities = 241/290 (83%), Gaps = 23/290 (8%) Strand=Plus/Plus Query 1254 AGAAGAGGTTGTTGTTC-CCTCAGAGAACTCGTTAGCTTCTGAAATAGAAGTACTGACTT 1312 |||||||| |||||||| | | |||||||||||| ||| |||||||||||||| |||||| Sbjct 1503 AGAAGAGGCTGTTGTTCACGT-AGAGAACTCGTTGGCTGCTGAAATAGAAGTATTGACTT 1561 Query 1313 CTCGCATTAAGGAACTTGAAGAGA-AGTTGGAAAAGTTAGAAGCCGAGAAACATGAGCTC 1371 |||| | |||||||||||||| | ||||||| ||||||||||| |||||| |||||||| Sbjct 1562 CTCGAACAAAGGAACTTGAAGA-ACAGTTGGAGAAGTTAGAAGCGGAGAAAGATGAGCTC 1620 Query 1372 GAGAA-TGAAGTTAAATGTAACAGAGAAGAGGCTGTTGTTCATATAGAGAACT------C 1424 || || |||||||||||||||||||||||||||||||| ||| ||||||||| | Sbjct 1621 GA-AAGTGAAGTTAAATGTAACAGAGAAGAGGCTGTTGCTCACGTAGAGAACTGGTTGGC 1679 Query 1425 -----A----GAAGTACTGACTT-CTCGAACTAAGGAACTTGAAGAAAAGTTGGAAAAGT 1474 | |||||| |||||| | |||| |||| ||||||| |||||||| |||| Sbjct 1680 TGCTGAAATAGAAGTATTGACTTGC-CGAATTAAGCAACTTGAGGAAAAGTTATCGAAGT 1738 Query 1475 TAGAAGCAGAGAAAGAGGAGCTCAAAAGTGAAGTTAAATGTAACAGAGAA 1524 | |||||||||||||| ||||||||| ||||||||| ||||||||||||| Sbjct 1739 TGGAAGCAGAGAAAGATGAGCTCAAATGTGAAGTTAGATGTAACAGAGAA 1788 > Ahg927190 jgi|Araly1|927190|scaffold_202751.1 Length=411 Score = 163 bits (88), Expect = 6e-39 Identities = 116/129 (90%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 1142 CTTCCTCTTCCATTGAACTTGATCTCATGGGTGATTTTCTTGAGATGGAACGTCTTGTAG 1201 |||| |||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| Sbjct 1 CTTCTTCTTCCATTGAAATTGA-CTCATGGATGATTTTCTTGAGATGGAACGTCTTGTAG 59 Query 1202 CATTGCCTGAGACGCC-AGATGGGAACGGTAAGAGTGGACCTGAATCAGTTACAGAAGAG 1260 |||| || ||||| || |||||||| ||||||||||||||||||||| || |||| |||| Sbjct 60 CATTTCCCGAGAC-CCTAGATGGGAGCGGTAAGAGTGGACCTGAATCTGTAACAGGAGAG 118 Query 1261 GTTGTTGTT 1269 | ||||||| Sbjct 119 GCTGTTGTT 127 Score = 110 bits (59), Expect = 8e-23 Identities = 146/184 (79%), Gaps = 21/184 (11%) Strand=Plus/Plus Query 1359 GAAACATGAGCTCGAGAA-TGAAGTTAAATGTAACAGAGAAGAGGCTGTTGTTCATAT-A 1416 |||| | |||||||| || ||||||||||||||||||||||||||||| | |||| || | Sbjct 133 GAAAGAGGAGCTCGA-AAGTGAAGTTAAATGTAACAGAGAAGAGGCTGGTATTCAGATCA 191 Query 1417 GAGAACTC-----------A-G-A-A-GTACTGACTT-CTCGAACTAAGGAACTTGAAGA 1460 | ||||| | | | | ||| |||||| | |||| |||| ||||||||| Sbjct 192 AA-AACTCGTTGGCTGCTGAAGTAGAAGTATTGACTTGC-CGAATTAAGCAACTTGAAGT 249 Query 1461 AAAGTTGGAAAAGTTAGAAGCAGAGAAAGAGGAGCTCAAAAGTGAAGTTAAATGTAACAG 1520 ||||| || ||||| |||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct 250 GAAGTTAGAGAAGTTGGAAGCAGAGAAAGATGAGCTCAAAAGGGAAGTAAAATGTAACAG 309 Query 1521 AGAA 1524 |||| Sbjct 310 AGAA 313 > Ahg472419 jgi|Araly1|472419|fgenesh2_kg.1__2373__AT1G21810.1 Length=2015 Score = 84.2 bits (45), Expect = 5e-15 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 2519 CAAACCGAGGGAGTTCTGAGAAGAATCGCAATGGATTTGCAACAGTATTCACAAGAAGTA 2578 |||||||||||||||||||||||||||||||||||||||| || || ||||| |||||| Sbjct 1796 CAAACCGAGGGAGTTCTGAGAAGAATCGCAATGGATTTGCCACGGTTTTCACTCGAAGTA 1855 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 104443451790 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5