BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G78000.1 Length=2291 Score E Sequences producing significant alignments: (Bits) Value Ahg927205 jgi|Araly1|927205|scaffold_202766.1 3155 0.0 Ahg313103 jgi|Araly1|313103|fgenesh1_pm.C_scaffold_1001883 1070 0.0 > Ahg927205 jgi|Araly1|927205|scaffold_202766.1 Length=2014 Score = 3155 bits (1708), Expect = 0.0 Identities = 1904/1998 (95%), Gaps = 15/1998 (1%) Strand=Plus/Plus Query 55 ATAGCTATGTCGTCAAGAGCTCACCCTGTGGAC-G-G----AAGTCCGGCGACGGACGGT 108 ||| |||||||||| |||||||||||||||||| | | |||||||||||| | ||| Sbjct 22 ATA-CTATGTCGTCGAGAGCTCACCCTGTGGACGGAGATTTAAGTCCGGCGACAGTTGGT 80 Query 109 GGACATGTTCCGATGAAACCT-TCACCCACTCGGCATAAAGTTGGAATCCCACCAAAGCA 167 ||| | |||| |||||| || | ||||| |||||||||||||| || ||||| ||||| Sbjct 81 GGAGGTCTTCCAATGAAATCTCCCCCCCAC-CGGCATAAAGTTGGGATTCCACCGAAGCA 139 Query 168 AAACATGTTCAAGGATTTCATGTACACATTCAAAGAAACTTTCTTT-CATGATGATCCTC 226 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 140 AAACATGTTCAAGGATTTCATGTACACATTCAAAGAAACTTT-TTTCCATGATGATCCTC 198 Query 227 TTAGGGATTTTAAGGATCAGCCTAAGTCTAAGCAGTTTATGCTCGGTCTCCAATCCGTCT 286 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 199 TTAGGGATTTTAAGGATCAGCCTAAATCTAAGAAGTTTATGCTCGGTCTCCAATCCGTCT 258 Query 287 TCCCGGTCTTCGATTGGGGACGTAACTACACTTTCAAGAAGTTCCGAGGTGATCTCATCT 346 |||||||||||||||||||||||||||||| | |||| ||||| ||||| |||||||||| Sbjct 259 TCCCGGTCTTCGATTGGGGACGTAACTACAATCTCAAAAAGTTTCGAGGCGATCTCATCT 318 Query 347 CCGGTTTAACCATTGCAAGTCTCTGCATTCCTCAGGATATTGGATACGCTAAGTTGGCGA 406 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 319 CTGGTTTAACAATCGCAAGTCTCTGCATTCCTCAGGATATTGGATACGCTAAGTTGGCGA 378 Query 407 ATCTTGATCCCAAATACGGTTTATATTCGAGTTTTGTTCCTCCATTGGTGTATGCTTGTA 466 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 379 ATCTTGATCCCAAATATGGTTTATATTCGAGTTTTGTTCCTCCGTTGGTGTATGCTTGTA 438 Query 467 TGGGAAGTTCTAGGGATATAGCAATAGGACCTGTCGCTGTGGTTTCGCTGTTGCTAGGCA 526 |||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 439 TGGGGAGTTCTAGGGATATAGCAATCGGACCTGTCGCTGTGGTTTCTCTGTTGCTAGGCA 498 Query 527 CATTGCTTCGAGCTGAGATTGATCCAAACACAAGTCCAGATGAATATCTCCGCCTTGCCT 586 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 499 CATTGCTTCGAGCTGAGATTGATCCAAACACAAATCCAGATGAATATCTCCGCCTTGCCT 558 Query 587 TCACTGCTACGTTTTTCGCCGGTATAACCGAAGCAGCCCTTGGATTCTTCAGATTAGGAT 646 ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct 559 TCACTGCCACGTTTTTCGCTGGTATCACCGAAGCAGCCCTTGGATTCTTCAGATTAGGGT 618 Query 647 TCTTGATCGATTTCCTTTCCCACGCGGCTGTGGTTGGCTTCATGGGCGGCGCAGCCATCA 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 619 TCTTGATCGATTTCCTTTCCCACGCGGCTGTGGTTGGCTTCATGGGCGGCGCAGCCATCA 678 Query 707 CTATCGCTCTTCAGCAGCTTAAAGGCTTCCTCGGGATCAAGAAATTCACCAAGAAAACTG 766 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 679 CTATCGCTCTTCAGCAGCTTAAGGGCTTCCTCGGGATCAAGAAATTCACCAAGAAAACTG 738 Query 767 ATATTATTTCTGTTCTTGAATCCGTTTTCAAAGCAGCTCATCACGGCTGGAATTGGCAGA 826 |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 739 ATATCATTGCTGTTCTTGAATCTGTTTTCAAAGCAGCTCATCACGGCTGGAATTGGCAGA 798 Query 827 CTATACTCATTGGTGCATCATTCTTGACCTTCCTTCTCACGTCTAAGATCATTGGGAAGA 886 ||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||| Sbjct 799 CTATACTCATTGGTGCATCATTCTTGAGCTTCCTTCTCACCTCTAAGTTCATTGGGAAGA 858 Query 887 AGAGCAAGAAACTATTCTGGGTACCAGCTATTGCGCCATTGATATCAGTTATCGTTTCCA 946 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 859 AGAGCAAGAAACTATTCTGGGTACCAGCAATTGCGCCATTGATATCAGTTATCATTTCCA 918 Query 947 CCTTCTTTGTCTACATAACCCGAGCCGACAAACAAGGAGTCCAAATCGTGAAACACCTTG 1006 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 919 CCTTCTTTGTCTACTTAACCCGAGCCGACAAACAAGGAGTCCAAATCGTGAAACACCTTG 978 Query 1007 ACCAAGGAATCAACCCTTCCTCGT-TCCATCTAATCTACTTCACTGGTGATAACCTTGCT 1065 |||||||||||||||||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct 979 ACCAAGGAATCAACCCTTCCTC-TCTGCATCTAATCTACTTCACCGGTGATAACCTTGCT 1037 Query 1066 AAGGGCATCCGCATCGGTGTAGTCGCTGGCATGGTCGCTTTAACAGAAGCTGTAGCGATT 1125 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1038 AAGGGCATCCGGATCGGTGTAGTCGCTGGCATGGTCGCTTTAACAGAAGCTGTAGCGATT 1097 Query 1126 GGAAGAACCTTTGCTGCAATGAAAGACTACCAAATCGACGGTAACAAAGAGATGGTAGCA 1185 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1098 GGAAGAACCTTTGCTGCCATGAAAGACTACCAAATCGACGGTAACAAAGAGATGGTAGCA 1157 Query 1186 TTAGGTATGATGAACGTAGTTGGATCGATGTCTTCTTGCTACGTAGCTACCGGATCTTTC 1245 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1158 TTAGGTATGATGAATGTAGTTGGATCGATGTCTTCTTGCTACGTAGCTACCGGATCTTTC 1217 Query 1246 TCAAGATCAGCTGTCAATTTCATGGCTGGATGTCAAACAGCGGTTTCAAACATCATAATG 1305 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1218 TCAAGATCAGCAGTCAATTTCATGGCTGGATGTCAAACAGCGGTTTCAAACATCATAATG 1277 Query 1306 TCAATTGTTGTTCTCTTGACATTGCTCTTCCTTACTCCTCTCTTCAAGTACACTCCAAAC 1365 |||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||| Sbjct 1278 TCAATTGTCGTTCTCTTGACATTGCTCTTCCTGACTCCACTGTTCAAGTACACTCCAAAC 1337 Query 1366 GCCATCCTCGCAGCTATCATCATCAACGCTGTGATTCCTTTGATCGATATCCAAGCTGCT 1425 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 1338 GCCATCCTCGCAGCTATCATCATCAACGCCGTAATTCCTTTGATCGATATCCAAGCTGCT 1397 Query 1426 ATTTTGATCTTCAAGGTTGATAAGCTCGATTTCATCGCCTGTATTGGAGCATTCTTTGGC 1485 ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 1398 ATTTTGATCTTTAAGGTTGATAAGCTAGATTTCATCGCTTGTATTGGAGCATTCTTTGGC 1457 Query 1486 GTCATCTTTGTTTCTGTTGAGATCGGACTTCTTATTGCCGTCTCGATCTCGTTTGCTAAG 1545 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1458 GTCATCTTTGTTTCCGTTGAGATCGGACTTCTCATTGCCGTCTCGATCTCGTTTGCTAAG 1517 Query 1546 ATCCTCTTGCAAGTAACAAGACCTAGAACTGCAGTTCTCGGAAATATTCCAAGAACTTCG 1605 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1518 ATCCTCTTGCAAGTAACAAGACCTAGAACTGCAGTTCTCGGAAATATTCCGAGAACTTCT 1577 Query 1606 GTTTACAGAAATATTCAACAGTATCCTGAAGCCACTATGGTTCCAGGGGTTCTTACTATT 1665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1578 GTTTACAGAAATATTCAACAGTATCCTGAAGCCACTATGGTTCCAGGGGTTCTTACTATT 1637 Query 1666 CGTGTTGACTCCGCCATTTACTTCTCCAACTCAAATTATGTTAGAGAAAGGATCCAGAGA 1725 |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct 1638 CGTGTTGACTCCGCGATTTACTTCTCCAACTCAAATTACGTCAGAGAAAGGATCCAGAGA 1697 Query 1726 TGGCTACATGAGGAAGAAGAAAAGGTAAAAGCAGCAAGCCTACCTAGGATTCAGTTTCTC 1785 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1698 TGGCTTCATGAAGAAGAAGAAAAGGTAAAAGCAGCAAGCCTACCTAGGATTCAGTTTCTC 1757 Query 1786 ATCATCGAAATGTCACCTGTTACGGACATCGATACAAGTGGTATTCACGCATTAGAAGAC 1845 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct 1758 ATCATCGAAATGTCACCTGTTACGGACATCGACACAAGCGGTATCCACGCGTTAGAAGAC 1817 Query 1846 TTATACAAGTCTCTCCAGAAAAGAGACATTCAGTTGATTCTGGCGAATCCTGGACCGTTG 1905 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 1818 TTATACAAGTCTCTCCAGAAAAGAGACATTCAGTTGATTCTAGCAAATCCTGGACCGTTG 1877 Query 1906 GTGATAGGCAAGCTACACTTGTCGCACTTTGCCGACATGTTAGGACAAGACAATATCTAT 1965 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1878 GTGATAGGCAAGCTACACTTGTCGCACTTTGCCGACATGTTAGGACAAGACAACATCTAT 1937 Query 1966 CTAACGGTGGCTGATGCCGTCGAGGCTTGCTGTCCAAAACTCTCC-AACGAGGTCTGAAA 2024 || || |||||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct 1938 CTGACAGTGGCTGACGCCGTCGAGGCTTGCTGTCCAAAACTCTCAGAA-GAGGTCTGAAA 1996 Query 2025 TTTACaagaaagaagaag 2042 |||||||||||||||||| Sbjct 1997 TTTACAAGAAAGAAGAAG 2014 > Ahg313103 jgi|Araly1|313103|fgenesh1_pm.C_scaffold_1001883 Length=2052 Score = 1070 bits (579), Expect = 0.0 Identities = 1014/1224 (83%), Gaps = 30/1224 (2%) Strand=Plus/Plus Query 814 TGGAATTGGCAGACTATACTCATTGGTGCATCATTCTTGACCTTCCTTCTCA-CGTCTAA 872 |||||||||||||| ||||||||| ||||||| ||||||| ||||||||||| | || || Sbjct 844 TGGAATTGGCAGACAATACTCATTAGTGCATCGTTCTTGATCTTCCTTCTCATC-TCCAA 902 Query 873 GATCATTGGGAAGAAGAGCAAGAAACTATTCTGGGTACCAGCTATTGCGCCATTGA-TAT 931 | |||| |||||||| | ||||||||| || ||| | ||||| ||||| || || | ||| Sbjct 903 GTTCATAGGGAAGAAAAACAAGAAACTGTTTTGGATTCCAGCGATTGCTCCGTT-AGTAT 961 Query 932 CAGTTATCGTTTCCACCTTCTTTGTCTACATAACCCGAGCCGACAA-ACAAGGAGTCCAA 990 | || ||| |||| |||||||| ||||||||||||||||||||||| | ||||||| || Sbjct 962 CTGTCATCATTTCAACCTTCTTCGTCTACATAACCCGAGCCGACAAGA-AAGGAGTTCAG 1020 Query 991 ATCGTGAAACACCTTGACCAAGGAATCAACCCTTCCTCGTTCCATCTAATCTACTTCACT 1050 || |||||||| |||||| |||| | |||||||| || || | |||||| |||||| | Sbjct 1021 ATAGTGAAACATCTTGACAAAGGTCTAAACCCTTCTTCTTTGCGTCTAATATACTTCTCC 1080 Query 1051 GGTGATAACCTTGCT-AAGGGCATCCGCATCGGTGTAGTCGCTGGCATGGTCGCTTTAAC 1109 || ||| ||||| || |||||| ||||||| || || ||| | |||||||| || || || Sbjct 1081 GGCGATTACCTT-CTCAAGGGCTTCCGCATAGGCGTTGTCTCAGGCATGGTTGCCTTGAC 1139 Query 1110 AGAAGCTGTAGCGATTGGAAGAACCTTTGCTGCAATGAAAGACTACCAAATCGACGGTAA 1169 |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct 1140 GGAAGCTGTAGCGATAGGAAGAACATTTGCAGCAATGAAAGACTACCAAATCGATGGTAA 1199 Query 1170 CAAAGAGATGGTAGCATTAGGTATG--ATGAACGTAG-TTGGATCGATGTCTTCTTGCTA 1226 ||||||||||||||||||||| | | |||||||| | | || |||||| | |||||||| Sbjct 1200 CAAAGAGATGGTAGCATTAGG-A-GCAATGAACGT-GATCGGTTCGATGACCTCTTGCTA 1256 Query 1227 CGTAGCTACCGGATCTTTCTCAAGATCAGCTGTCAATTTCATGGCTGGATGTCAAACAGC 1286 ||| | ||||| || ||||||||||| |||||||| |||||||| ||||||||||| || Sbjct 1257 TGTATCCACCGGTTCGTTCTCAAGATCCGCTGTCAACTTCATGGCCGGATGTCAAACGGC 1316 Query 1287 GGTTTCAAACATCATAATGTCAATTGTTGTTCTCTTGAC-ATTGCTCTTCCTTACTCCTC 1345 || || |||||||| ||||| || || || ||||| || || |||||||| ||||||| Sbjct 1317 AGTCTCCAACATCATCATGTCCATCGTCGTCCTCTTAACGCTT-CTCTTCCTCACTCCTC 1375 Query 1346 TCTTCAAGTACACTCCAAACGCCATCCTCGCAGCTATCATCATCAACGCTGTGATTCCTT 1405 | ||||| ||||| || ||||| || || ||||| |||||||||||||| |||||||||| Sbjct 1376 TTTTCAAATACACACCCAACGCAATTCTTGCAGCGATCATCATCAACGCCGTGATTCCTT 1435 Query 1406 TGATCGATATCCAA-GCTGCTATTTTGATCTTCAAGGTTGATAAGCTCGATTTCATCGCC 1464 || | || | || ||| | |||||||| |||||| | |||||||||||||| | || Sbjct 1436 TGGTTGACGT-TAATGCTACCATTTTGATTTTCAAGATCGATAAGCTCGATTTTGTTGCT 1494 Query 1465 TGTATTGGAGCATTCTTTGGCGTCATCTTTGTTTCTGTTGAGATCGGACTTCTTATTGCC 1524 ||||| || || |||||||| ||||||||||| || || ||||| || ||||| || ||| Sbjct 1495 TGTATGGGGGCTTTCTTTGGTGTCATCTTTGTATCCGTAGAGATTGGCCTTCTAATAGCC 1554 Query 1525 GTCTCGATCTCGTTTGCTAAGATCCTCTTGCAAGTAACAAGACCTAGAACTGCAGTTCTC 1584 || ||| || ||||| ||||| || |||||||| || |||||||| || ||| |||| Sbjct 1555 GTGGGGATATCTTTTGCCAAGATACTTTTGCAAGTTACGAGACCTAGGACAGCAATTCTT 1614 Query 1585 GGAAATATTCCAAGAACTTCGGTTTACAGAAATATTCAA-CAGTATCCTGAAGCCACTAT 1643 ||||| || ||| | |||||||||||||| |||| |||| |||||||||||||| |||| Sbjct 1615 GGAAAGATACCAGGGACTTCGGTTTACAGGAATA-TCAATCAGTATCCTGAAGCGACTA- 1672 Query 1644 GG-TTCCAGGGGTTCTT-ACTATTCGTGTTGACTCCGCCATTTACTTCTCCAACTCAAAT 1701 || |||| || ||| || || ||||||||||||||||| |||||||||||||| || ||| Sbjct 1673 GGATTCCCGGAGTT-TTGACAATTCGTGTTGACTCCGCGATTTACTTCTCCAATTCCAAT 1731 Query 1702 TATGTTAGAGAAAGGATCCAGAGATGGCT-ACATGAGGAAGAAGAAAAGGTAAAAGCAGC 1760 ||||| || |||||||| || |||||| | ||| || |||||||| | ||| ||||| || Sbjct 1732 TATGTCAGGGAAAGGATTCAAAGATGGTTGACA-GATGAAGAAGAGATGGTGAAAGCTGC 1790 Query 1761 AAGCCTACCTAGGATTCAGTTTCTCATCATCGAAATGTCACCTGTTACGGACATCGATAC 1820 |||| | || ||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1791 AAGCTTGCCGAGGATCCAGTTTCTTATCATCGAAATGTCACCTGTTACGGACATCGATAC 1850 Query 1821 AAGTGGTATTCACGCATTAGAAGACTTATACAAGTCTCTCCAGAAAA-GAGACATTCAGT 1879 || || ||||| || |||||||||||||| ||||||||| | |||| || ||||||||| Sbjct 1851 TAGCGGGATTCATGCCTTAGAAGACTTATATAAGTCTCTCTA-AAAACGATACATTCAGT 1909 Query 1880 TGATTCTGGCGAATCCTGGACCGTTGGTGATAGGCAAGCTACAC-TTGTCGCACTTTGCC 1938 || |||| |||||||| |||||| ||| |||| ||||||||| || || |||||||| Sbjct 1910 TGGTTCTAGCGAATCCAGGACCGCCGGTCATAGATAAGCTACACGTT-TCTCACTTTGCA 1968 Query 1939 GACATGTTAGGACAAGACAATATCTATCTAACGGTGGCTGATGCCGTCGAGGCTTGCTGT 1998 |||||||||||||| ||||| |||| ||| ||||||||||| ||||| || |||||| | Sbjct 1969 GACATGTTAGGACAGGACAAAATCTTTCTGACGGTGGCTGAAGCCGTGGATTCTTGCTCT 2028 Query 1999 CCAAAACTCTCCAACGAGGTCTGA 2022 || ||||||||| ||||||||||| Sbjct 2029 CCTAAACTCTCCGACGAGGTCTGA 2052 Score = 494 bits (267), Expect = 1e-138 Identities = 515/633 (81%), Gaps = 24/633 (4%) Strand=Plus/Plus Query 163 AAGCAAAACATGTTCAAGGATTTCATGTACACATTCAAAGAAACTTTCTTTCATGATGAT 222 ||||||||| | ||||| || ||||||||||| ||||||||||||||||| || |||||| Sbjct 112 AAGCAAAACCTCTTCAATGAGTTCATGTACACTTTCAAAGAAACTTTCTTCCACGATGAT 171 Query 223 CCTCTTAGGGATTTTAAGGATCAGCCTAAGTCTAAGCAGTTTATGCTCGGTCTCCAATCC 282 ||||| ||| |||| ||||| ||| | ||||| ||| || | ||||||||| |||| ||| Sbjct 172 CCTCTAAGGCATTTCAAGGACCAGTCAAAGTCCAAGAAGCTCATGCTCGGTATCCAGTCC 231 Query 283 GTCTTCCCGGTCT-TCGATTGGGGACGTAACTACACT-TTCAAGAAGTTCCGAGGTGATC 340 ||||||||||| | |||| |||||| | || || | | || |||| ||| || || |||| Sbjct 232 GTCTTCCCGGT-TATCGAGTGGGGAAGAAAATATAATCTT-AAGATGTTTCGCGGCGATC 289 Query 341 TCATCT-CCGGTTTAACCATTGCAAGTCTCTGCATTCCTCAGGATATTGGATACGCTAAG 399 | || | ||||||||||||| || ||||||||||||||||||||||||||||| || ||| Sbjct 290 TTAT-TGCCGGTTTAACCATAGCCAGTCTCTGCATTCCTCAGGATATTGGATATGCAAAG 348 Query 400 TTGGCGAATCTTGATCCCAAA-TACGGTTTATATTCGAGTTTTGTTCCTCCATTGGTGTA 458 | || | |||||| ||| || || ||| ||||||| |||||||||||||| |||||||| Sbjct 349 CTCGCCAGTCTTGA-CCCTAAGTATGGTCTATATTCAAGTTTTGTTCCTCCGTTGGTGTA 407 Query 459 TGCTTGTATGGGAAGTTCTAGGGATATAGCAATAGGACCTGTCGCTGTGGTTTCGCTG-T 517 || ||||||||||| || | ||||||||| || ||||| || || ||||||||||| | Sbjct 408 CGCATGTATGGGAAGCTCAAAGGATATAGCGATTGGACCCGTGGCAGTGGTTTCGCTCCT 467 Query 518 TGCTAGGCACAT-TGCTTCGAGCTGAGATTGATCCAAACACAAGTCC-AGATGAATATCT 575 | |||| || | ||||||| |||||||| || || ||||||| || | | |||||||| Sbjct 468 TT-TAGGTAC-TCTGCTTCGGGCTGAGATCGACCCCAACACAAACCCTA-ACGAATATCT 524 Query 576 CCGCCTT-GCCTTCAC-TGCTACGTT-TTTCGCCGGTATAAC-CGAAGCAGCCCTTGGAT 631 |||| || |||||||| | | ||||| ||| |||||| | || | ||||||| || || | Sbjct 525 CCGC-TTAGCCTTCACCTCC-ACGTTCTTT-GCCGGTGTCACTC-AAGCAGCACTAGGGT 580 Query 632 TCTTCAGATTAGGATTCTTGATCGATTTCCTT-TCCCACGCGGCTGTGGTTGGCTTCATG 690 |||| ||||| || ||||||||||||||| || |||||||| || || || || |||||| Sbjct 581 TCTTTAGATTGGGTTTCTTGATCGATTTC-TTATCCCACGCCGCGGTAGTAGGGTTCATG 639 Query 691 GGCGGCGCAGCCATCACTATCGCTCTTCAGCAGCTTAAAGGCTTCCTCGGGATCAAGAAA 750 || || ||||||||||| || || ||||| ||||| ||||| |||||||| ||||| || Sbjct 640 GGTGGAGCAGCCATCACCATTGCGCTTCAACAGCTCAAAGGATTCCTCGGAATCAATAAG 699 Query 751 TTCACCAAGAAAACTGATATTATTTCTGTTCTT 783 ||||| |||||||| ||||| || | |||||| Sbjct 700 TTCACAAAGAAAACCGATATCATCGCGGTTCTT 732 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 86274404925 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5