BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G78670.1 Length=1347 Score E Sequences producing significant alignments: (Bits) Value Ahg951931 jgi|Araly1|951931|scaffold_26200002.1 1611 0.0 Ahg927282 jgi|Araly1|927282|scaffold_202843.1 1611 0.0 Ahg951932 jgi|Araly1|951932|scaffold_26200003.1 736 0.0 Ahg477030 jgi|Araly1|477030|fgenesh2_kg.2__2160__AT1G78660.2 728 0.0 Ahg316768 jgi|Araly1|316768|fgenesh1_pm.C_scaffold_2001801 695 0.0 Ahg359459 jgi|Araly1|359459|fgenesh1_pg.C_scaffold_262000001 569 1e-161 > Ahg951931 jgi|Araly1|951931|scaffold_26200002.1 Length=1093 Score = 1611 bits (872), Expect = 0.0 Identities = 1019/1090 (93%), Gaps = 9/1090 (1%) Strand=Plus/Plus Query 88 GTGCCATCTTCATCCTCTGAGATGTGGAGATTCTGCTTCTTCTTATCGTTACTATTCTTT 147 ||| |||||||||||||||||||||||||||||| ||||| |||| |||| ||| ||||| Sbjct 1 GTG-CATCTTCATCCTCTGAGATGTGGAGATTCTACTTCTGCTTACCGTTCCTACTCTTT 59 Query 148 GATGTTAGCGCGGTGAAATCTGCAGAATCGATTTTCCTCCCAAGTCAAATCGGAGTTGAA 207 ||| ||||||||| || ||||| ||||||||||||||||||||||||||| ||||||| Sbjct 60 GATATTAGCGCGGCGACTTCTGCCGAATCGATTTTCCTCCCAAGTCAAATCCGAGTTGAC 119 Query 208 GATTCCCGCGTCTTTGAAT-CTCTTAGTCTTAGTCCTGTATGCTCCGCGGCTGATCCAAA 266 |||||||||||||| || | | || ||||| |||||||||| | | ||||| || Sbjct 120 TCTTCCCGCGTCTTTG-ATACACGGAG---TAGTCATGTATGCTCCTCCCCGGATCCGAA 175 Query 267 CCTCAACTACAAGCCGGTCATCGGGATTCTGACCCACCCTGGCGAAGGTCGATGGGACGC 326 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 176 CCTCAACTACAAGCCGGTCATTGGGATTCTGACCCACCCTGGCGAAGGTCGATGGGACGC 235 Query 327 TCGTCTTCACTCTCTGAAAAACTACGCCTACGCGACGAACATATCGTACATCGCAGCTTC 386 | ||| |||||||||| | |||||||||| |||||||||||||||||||||||||||| Sbjct 236 TGGTCGTCACTCTCTG---AGCTACGCCTACTCGACGAACATATCGTACATCGCAGCTTC 292 Query 387 GTATGTGAAGTTAGCTGAGACTGGTGGAGCTCGTGTGATTCCTCTTATCTACAACGAGCC 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 293 GTATGTGAAGTTAGCTGAGACTGGTGGAGCTCGTGTGATTCCTCTTATCTACAACGAGCC 352 Query 447 TGAAGAAATCTTGTTTCAGAAGCTAGAATTGGTAAATGGTGTGATATTCACAGGTGGTTG 506 ||||||| |||||||||| ||||||||| |||| ||||||||||||||||| |||||||| Sbjct 353 TGAAGAACTCTTGTTTCAAAAGCTAGAACTGGTGAATGGTGTGATATTCACTGGTGGTTG 412 Query 507 GGCTAAAACAGGGTTATATTACGATGTTGTGGAGAAAATCTTCAATAAAGTTATGGAGAA 566 |||||||||||| |||||||||||| | |||||||||||||||||||||||| ||||||| Sbjct 413 GGCTAAAACAGGATTATATTACGATATAGTGGAGAAAATCTTCAATAAAGTTTTGGAGAA 472 Query 567 AAATGATGCTGGAGAACATTTTCCGGTGTACGCCATGTGTCTTGGATTCGAGATTTTGTC 626 || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 473 GAACGATGCTGGAGAACATTTTCCGGTGTATGCCATGTGTCTTGGATTCGAGATTTTGTC 532 Query 627 AATGATCATAAGTCAGAACAGAGACATTCTTGAGAGGTTTAACTCAGTAAACTATGCATC 686 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 533 AATGATCATAAGTCAGAACAGAGACATTCTTGAAAGGTTTAACTCAGTAAACTATGCATC 592 Query 687 AAGTCTCCAGTTTTTTAAAAACGTTAATATCGAAGCAACCGTGTTCCAAAGATTTCCTCC 746 |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| Sbjct 593 AAGTCTCCAGTTTTTTGAAAATGTTAATATTGAAGCAACCGTGTTCCAAAGATTTCCTCC 652 Query 747 AGAGCTGTTGAAAAAGCTCAGTGCAGACTGTTTGGTTATGCAGAACCACTATTTTGGTAT 806 |||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| Sbjct 653 AGAGCTGTTGAAAAAGCTTAGTACAGACTGTTTGGTTATGCAAAACCACTATTTTGGTAT 712 Query 807 CTCACCAGACAACTTTCAAGGCAATCCTTATCTGTCTAGTTTCTTCAATATCGTCACAAC 866 |||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| Sbjct 713 CTCACCAGACAACTTTCAAGGCAAGCCTTCTCTGTCTAGTTTCTTCAATATCCTCACAAC 772 Query 867 CAGCGCCGATAAAGACAGCAAGACTTTTGTTTCAACTATTCGATCAAAACGATACCCTGT 926 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 773 CAGCGCTGATAAAGACAGCAAGACTTTTGTTTCAACTATTCGATCAAAAGGATACCCTGT 832 Query 927 GACCGCCTTCCAATGGCATCCAGAGAAAAATGCATTCGAATGGGGATCATCTGAAATCCC 986 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 833 GACCGCCTTCCAGTGGCATCCAGAGAAAAATGCATTCGAATGGGGATCATCCGAAATCCC 892 Query 987 ACACTCTGAGGACGCAATTCAGGTGACTCAACATGCTGCAAATTATCTAGTCAGTGAAGC 1046 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 893 ACACTCTGAGGACGCAATTCAGGTGACTCAGTATGCTGCAAATTATCTAGTCAGTGAAGC 952 Query 1047 CAGAAAGTCAATGAACAGACCATCTTCTGAGAAAGTGCTGAGCAATCTCATCTACAACTA 1106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 953 TAGAAAGTCAATGAACAGACCATCTTCTGAGAAAGTGCTGAGCAATCTCATCTACAATTA 1012 Query 1107 CAAGCCTACGTACTCCGGATACAAAGGGAGCGGTGACGACGAGGTTTATATTTTCACGTA 1166 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 1013 CAAGCCTACATACTCCGGATACAAAGGGAGCGGTGACGACGAGGTTTACATTTTCATGTA 1072 Query 1167 ACAAAGATCC 1176 | |||||||| Sbjct 1073 ATAAAGATCC 1082 > Ahg927282 jgi|Araly1|927282|scaffold_202843.1 Length=1093 Score = 1611 bits (872), Expect = 0.0 Identities = 1019/1090 (93%), Gaps = 9/1090 (1%) Strand=Plus/Plus Query 88 GTGCCATCTTCATCCTCTGAGATGTGGAGATTCTGCTTCTTCTTATCGTTACTATTCTTT 147 ||| |||||||||||||||||||||||||||||| ||||| |||| |||| ||| ||||| Sbjct 1 GTG-CATCTTCATCCTCTGAGATGTGGAGATTCTACTTCTGCTTACCGTTCCTACTCTTT 59 Query 148 GATGTTAGCGCGGTGAAATCTGCAGAATCGATTTTCCTCCCAAGTCAAATCGGAGTTGAA 207 ||| ||||||||| || ||||| ||||||||||||||||||||||||||| ||||||| Sbjct 60 GATATTAGCGCGGCGACTTCTGCCGAATCGATTTTCCTCCCAAGTCAAATCCGAGTTGAC 119 Query 208 GATTCCCGCGTCTTTGAAT-CTCTTAGTCTTAGTCCTGTATGCTCCGCGGCTGATCCAAA 266 |||||||||||||| || | | || ||||| |||||||||| | | ||||| || Sbjct 120 TCTTCCCGCGTCTTTG-ATACACGGAG---TAGTCATGTATGCTCCTCCCCGGATCCGAA 175 Query 267 CCTCAACTACAAGCCGGTCATCGGGATTCTGACCCACCCTGGCGAAGGTCGATGGGACGC 326 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 176 CCTCAACTACAAGCCGGTCATTGGGATTCTGACCCACCCTGGCGAAGGTCGATGGGACGC 235 Query 327 TCGTCTTCACTCTCTGAAAAACTACGCCTACGCGACGAACATATCGTACATCGCAGCTTC 386 | ||| |||||||||| | |||||||||| |||||||||||||||||||||||||||| Sbjct 236 TGGTCGTCACTCTCTG---AGCTACGCCTACTCGACGAACATATCGTACATCGCAGCTTC 292 Query 387 GTATGTGAAGTTAGCTGAGACTGGTGGAGCTCGTGTGATTCCTCTTATCTACAACGAGCC 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 293 GTATGTGAAGTTAGCTGAGACTGGTGGAGCTCGTGTGATTCCTCTTATCTACAACGAGCC 352 Query 447 TGAAGAAATCTTGTTTCAGAAGCTAGAATTGGTAAATGGTGTGATATTCACAGGTGGTTG 506 ||||||| |||||||||| ||||||||| |||| ||||||||||||||||| |||||||| Sbjct 353 TGAAGAACTCTTGTTTCAAAAGCTAGAACTGGTGAATGGTGTGATATTCACTGGTGGTTG 412 Query 507 GGCTAAAACAGGGTTATATTACGATGTTGTGGAGAAAATCTTCAATAAAGTTATGGAGAA 566 |||||||||||| |||||||||||| | |||||||||||||||||||||||| ||||||| Sbjct 413 GGCTAAAACAGGATTATATTACGATATAGTGGAGAAAATCTTCAATAAAGTTTTGGAGAA 472 Query 567 AAATGATGCTGGAGAACATTTTCCGGTGTACGCCATGTGTCTTGGATTCGAGATTTTGTC 626 || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 473 GAACGATGCTGGAGAACATTTTCCGGTGTATGCCATGTGTCTTGGATTCGAGATTTTGTC 532 Query 627 AATGATCATAAGTCAGAACAGAGACATTCTTGAGAGGTTTAACTCAGTAAACTATGCATC 686 ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct 533 AATGATCATAAGTCAGAACAGAGACATTCTTGAAAGGTTTGACTCAGTAAACTATGCATC 592 Query 687 AAGTCTCCAGTTTTTTAAAAACGTTAATATCGAAGCAACCGTGTTCCAAAGATTTCCTCC 746 |||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| Sbjct 593 AAGTCTCCAGTTTTTTGAAAATGTTAATATCGAAGCTACCGTGTTCCAAAGATTTCCTCC 652 Query 747 AGAGCTGTTGAAAAAGCTCAGTGCAGACTGTTTGGTTATGCAGAACCACTATTTTGGTAT 806 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 653 AGAGCTGTTGAAAAAACTCAGTACAGACTGTTTGGTTATGCAGAACCACTATTTTGGTAT 712 Query 807 CTCACCAGACAACTTTCAAGGCAATCCTTATCTGTCTAGTTTCTTCAATATCGTCACAAC 866 ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 713 CTCACCAGACAACTTCCAAGGCAATCCTTCTCTGTCTAGTTTCTTCAATATCCTCACAAC 772 Query 867 CAGCGCCGATAAAGACAGCAAGACTTTTGTTTCAACTATTCGATCAAAACGATACCCTGT 926 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 773 CAGCGCTGATAAAGACAGCAAGACTTTTGTTTCAACTATTCGATCAAAAGGATACCCTGT 832 Query 927 GACCGCCTTCCAATGGCATCCAGAGAAAAATGCATTCGAATGGGGATCATCTGAAATCCC 986 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 833 GACCGCCTTCCAGTGGCATCCAGAGAAAAATGCATTCGAATGGGGATCATCCGAAATCCC 892 Query 987 ACACTCTGAGGACGCAATTCAGGTGACTCAACATGCTGCAAATTATCTAGTCAGTGAAGC 1046 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 893 ACACTCTGAGGACGCAATTCAGGTGACTCAGTATGCTGCAAATTATCTAGTCAGTGAAGC 952 Query 1047 CAGAAAGTCAATGAACAGACCATCTTCTGAGAAAGTGCTGAGCAATCTCATCTACAACTA 1106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 953 TAGAAAGTCAATGAACAGACCATCTTCTGAGAAAGTGCTGAGCAATCTCATCTACAATTA 1012 Query 1107 CAAGCCTACGTACTCCGGATACAAAGGGAGCGGTGACGACGAGGTTTATATTTTCACGTA 1166 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 1013 CAAGCCTACATACTCCGGATACAAAGGGAGCGGTGACGACGAGGTTTACATTTTCATGTA 1072 Query 1167 ACAAAGATCC 1176 | |||||||| Sbjct 1073 ATAAAGATCC 1082 > Ahg951932 jgi|Araly1|951932|scaffold_26200003.1 Length=1087 Score = 736 bits (398), Expect = 0.0 Identities = 781/960 (81%), Gaps = 49/960 (5%) Strand=Plus/Plus Query 238 AGTCCTGTATGCTCCGCGGCTGATCCAAACCTCAACTACAAGCCGGTCATCGGGATTCTG 297 ||||| |||||||||||| | ||||| |||||||| |||| |||||| || ||||||||| Sbjct 141 AGTCCGGTATGCTCCGCGCCGGATCCGAACCTCAATTACAGGCCGGTTATTGGGATTCTG 200 Query 298 ACCCACCCTGGCGAAGGTCGATGGGACGCTCGTCTTCACTCTCTGAAAAACTACGCCTAC 357 | ||| ||||| | | || | | || ||| || | | ||| || | | |||| Sbjct 201 AGCCATCCTGGTG-A---CG--GTG-CG-TCG-GGTC-GT-T-TGAGCAA-T--G-CTAC 244 Query 358 GCGACGAACATATCGTACATCGCAGCTTCGTATGTGAAGTTAGCTGAGACTGGTGGAGCT 417 |||| | |||| ||| || |||||||||||||| ||||||||| |||||||||| Sbjct 245 -AGACG--C--GTCGTCCATTGCGGCTTCGTATGTGAAATTAGCTGAGTCTGGTGGAGCA 299 Query 418 CGTGTGATTCCTCTTATCTACAACGAGCCTGAAGAAA-TCTTGTTTCAGAAGCTAGAATT 476 |||||||| || || ||||| ||||| |||||||||| || | ||||||||||||||||| Sbjct 300 CGTGTGATCCCACTCATCTATAACGATCCTGAAGAAATTC-TCTTTCAGAAGCTAGAATT 358 Query 477 GGTAAATGGTGTGATATTCACAGGTGGTTGGGCTAAA-ACAGGGTTATATTACGATGTTG 535 ||| || ||||||||| |||| ||||||||||||||| | ||| || |||| || | | Sbjct 359 GGTCAACGGTGTGATACTCACTGGTGGTTGGGCTAAAGA-AGGATTGTATTTTGAAATCG 417 Query 536 TGGAGAAAATCTTCAATAAAGTTATGGAGAA-AAATGATGCTGGAGAACATTTTCCGGTG 594 | |||||||||||||||||||| |||| || ||||||||||||||| |||||||| | Sbjct 418 TCAAGAAAATCTTCAATAAAGTTTTGGA-AAGAAATGATGCTGGAGAGCATTTTCCTATA 476 Query 595 TACGCCATGTGTCTTGGATTCGAGATTTTGTCAATGATCATAAGTCAGAACAGAGACATT 654 ||||| || || || ||||| ||| | ||| ||||||||||||||||||||||||||||| Sbjct 477 TACGCTATTTGCCTCGGATTTGAGCTCTTGACAATGATCATAAGTCAGAACAGAGACATT 536 Query 655 CTTGAGAGGTTTAACT-CA-GTAAACTATGCATCAAGTCTCCAGTTTTTTAAAAACGTTA 712 |||| | | | | || | ||| | |||||||||||| ||||| || |||| |||| Sbjct 537 TTTGAAAAAATGGA-TGCAAG-AAATTCTGCATCAAGTCTTCAGTTCCTTGAAAATGTTA 594 Query 713 ATATCGAAGCAACCGTGTTCCAAAGATTTCCTCCAGAGCTGTTGAAAAAGCTCAGTGCAG 772 ||||| ||| |||| | |||||||||||||||||||| ||||||||||| ||| || ||| Sbjct 595 ATATCCAAGGAACCATTTTCCAAAGATTTCCTCCAGAACTGTTGAAAAAACTCGGTACAG 654 Query 773 ACTGTTTGGTTATGCAGAACCA-CTATTTTGGTATCTCACCAGACAA-CTTTCAAGGCAA 830 | ||||| |||||||||||||| | ||| |||||||||||||| || |||| ||||||| Sbjct 655 ATTGTTTAGTTATGCAGAACCATCGGTTT-GGTATCTCACCAGA-AAGCTTTGAAGGCAA 712 Query 831 TCCTTA-TCTGTCTAGTTTCTTCAATATCGTCACAACCAGCGCCGATAA-AGACAGCAAG 888 | || |||||| |||||||| || ||||||||||| |||| ||||| | |||||||| Sbjct 713 TG-TTGCTCTGTCCAGTTTCTTTAAAATCGTCACAACAAGCGTTGATAACA-ACAGCAAG 770 Query 889 ACTTT-TGTTTCAACTA-TTCGATCAAAACGATACCCTGTGACCGCCTTCCAATGGCATC 946 ||| ||||||||| | ||| ||||||| ||| || ||||||| |||||| ||||||| Sbjct 771 G-TTTATGTTTCAAC-AGTTCAATCAAAAAAATATCCAGTGACCGGCTTCCAGTGGCATC 828 Query 947 CAGAGAAAAATGCATTCGAATGGGGATCATCTGAAATCCCACACTCTGAGGACGCAATTC 1006 | ||||||||||||||||| ||||||||||| |||| ||||||||||||||||| || | Sbjct 829 CCGAGAAAAATGCATTCGAGTGGGGATCATCCAAAATTCCACACTCTGAGGACGCGATCC 888 Query 1007 AGGTGACTCAACATGCTGCAAATTATCTAGTCAGTGAAGCCAGAAAGTCAATGAACAGAC 1066 |||||||||| || || |||||| |||||||||||||||| || |||||| ||||||| | Sbjct 889 AGGTGACTCAGCACGCAGCAAATCATCTAGTCAGTGAAGCTAGGAAGTCACTGAACAGGC 948 Query 1067 C--ATCTTCTGAGAAAGTGCTGAGCAATCTCATCTACAACTACAAGCCTACGTACTCCGG 1124 | | || || |||||||||||||||||||||| || |||||||||||||| |||| || Sbjct 949 CGGA-CT-CTAAGAAAGTGCTGAGCAATCTCATTTATAACTACAAGCCTACCTACTGTGG 1006 Query 1125 ATACAAAGGGA-GCGGTGACGACGAGGTTTATATTTTCACGTAACAAAGATCCCTTCTCT 1183 |||| ||||| | ||| ||||||||||||| || ||||| | ||| |||||||||||| Sbjct 1007 ATACGCAGGGAAG-GGTTACGACGAGGTTTACATCTTCACACAGCAACGATCCCTTCTCT 1065 > Ahg477030 jgi|Araly1|477030|fgenesh2_kg.2__2160__AT1G78660.2 Length=1205 Score = 728 bits (394), Expect = 0.0 Identities = 686/826 (83%), Gaps = 24/826 (3%) Strand=Plus/Plus Query 371 CGTACATCGCAGCTTCGTATGTGAAGTTAGCTGAGACTGGTGGAGCTCGTGTGATTCCTC 430 |||||||||| ||||| ||||| ||||| |||||| | |||||||||||||| || || | Sbjct 258 CGTACATCGCGGCTTCCTATGTAAAGTTCGCTGAGGCAGGTGGAGCTCGTGTTATCCCAC 317 Query 431 TTATCTACAACGAGCCTGAAGAAATCTTGTTTCAGAAGCTAGAATTGGTAAATGGTGTGA 490 | ||||||||||| ||||||||| || | ||||||||||||||| |||| || ||||||| Sbjct 318 TCATCTACAACGAACCTGAAGAACTCCTCTTTCAGAAGCTAGAACTGGTCAACGGTGTGA 377 Query 491 TATTCACAGGTGGTTGGGCT--AAAACAGGGTTATATTACGATG-TTGTGGAGAAAATCT 547 ||||||| |||||||||||| |||| | | |||| || ||| | | || | ||||||| Sbjct 378 TATTCACTGGTGGTTGGGCTAAAAAATATGATTAT-TT-CGA-GATCGTCAAAAAAATCT 434 Query 548 TCAATAAAG-TTATGGAGAAAAATGATGCTGGAGAACATTTTCCGGTGTACGCCATGTGT 606 |||||| || || |||||| ||||||||||||||| |||||||| || || | ||| ||| Sbjct 435 TCAATAGAGCTT-TGGAGAGAAATGATGCTGGAGAGCATTTTCCAGTTTATGGCATTTGT 493 Query 607 CTTGGATTCGAGATTTTGTCAATGATCATAAGTCAGAACAGAGACATTCTTGAGAGGTTT 666 || ||||||||| || ||||||| ||||| ||||||||||||||||||||||| || ||| Sbjct 494 CTCGGATTCGAGCTTATGTCAATTATCATCAGTCAGAACAGAGACATTCTTGAAAGATTT 553 Query 667 AACT-CAGTA-AACT-ATGCATCAAGTCTCCAGTTTTTTAAAAACGTTAATATCGAAGCA 723 | | ||| | | | ||||||||| || |||||| || | || ||||||||||| | | Sbjct 554 GA-TGCAG-AGGA-TAATGCATCAACCCTACAGTTTGTTGATAATGTTAATATCGATGGA 610 Query 724 ACCGTGTTCCAAAGATTTCCTCCAGAGCTGTTGAAAAAGCTCAGTGCAGACTGTTTGGTT 783 || | |||||||||||||||||||||||||||||||| |||||| |||| ||||||||| Sbjct 611 ACATTATTCCAAAGATTTCCTCCAGAGCTGTTGAAAAAACTCAGTACAGATTGTTTGGTT 670 Query 784 ATGCAGAACCACTATTTTGGTATCTCACCAGACAA-CTTTCAAGGCAATCCTTATCTGTC 842 |||||||| ||| | | ||||||| |||||| ||| |||||||||||||||| | |||| Sbjct 671 ATGCAGAAACACAAGTATGGTATCACACCAG-CAAACTTTCAAGGCAATCCTGCTTTGTC 729 Query 843 TAGTTTCTTC-AATATCGTCACAACCAGCGCCGAT-AAAGACAGCAAGACTTTTGTTTCA 900 ||||||||| || ||| |||||||| || ||| ||| |||||||||||| ||||||| Sbjct 730 TAGTTTCTTTGAA-ATCCTCACAACCTGCATAGATGAAA-ACAGCAAGACTTATGTTTCA 787 Query 901 ACTATTCGATCAAA-ACGATACCCTGTGACCGCCTTCCAATGGCATCCAGAGAAAAATGC 959 ||| || | |||| | ||||||| | || | |||||| |||||||| ||||||||||| Sbjct 788 ACTGTTAAAGCAAAGA-GATACCCAATAACTGGCTTCCAGTGGCATCCTGAGAAAAATGC 846 Query 960 ATTCGAATGGGGATCATCTGAAATCCCACACTCTGAGGACGCAATTCAGGTGACTCAACA 1019 ||| |||||||||||||| | || |||||||||||||| ||||| |||||||| || || Sbjct 847 ATTTGAATGGGGATCATCCGCGATTCCACACTCTGAGGATGCAATCCAGGTGACACAGCA 906 Query 1020 TGCTGCAAATTATCTAGTCAGTGAAGCCAGAAAGTCAATGAACAGACCATCTTCTGAGAA 1079 |||||| | |||| ||||||||||||| || |||||| ||||||||||| | || |||| Sbjct 907 TGCTGCTAGTTATTTAGTCAGTGAAGCTAGGAAGTCACTGAACAGACCACCATCAAAGAA 966 Query 1080 AGTGCTGAGCAATCTCATCTACAACTACAAGCCTACGTACTCCGGATACAAAGGGAGCGG 1139 |||||| ||||||||||| |||||||| |||||||| |||| |||||| |||||| || Sbjct 967 AGTGCTAAGCAATCTCATATACAACTATAAGCCTACTTACTGTGGATACGCAGGGAGGGG 1026 Query 1140 TGACGACGAGGTTTATATTTTCACGTAACAAAGATCCC-TTCTCTG 1184 | ||||||||||||| |||||||| ||| |||||||| || |||| Sbjct 1027 TTACGACGAGGTTTACATTTTCACACAACCAAGATCCCGTT-TCTG 1071 > Ahg316768 jgi|Araly1|316768|fgenesh1_pm.C_scaffold_2001801 Length=1032 Score = 695 bits (376), Expect = 0.0 Identities = 765/947 (81%), Gaps = 49/947 (5%) Strand=Plus/Plus Query 238 AGTCCTGTATGCTCCGCGGCTGATCCAAACCTCAACTACAAGCCGGTCATCGGGATTCTG 297 ||||| |||||||||||| | ||||| |||||||| |||| |||||| || ||||||||| Sbjct 118 AGTCCGGTATGCTCCGCGCCGGATCCGAACCTCAATTACAGGCCGGTTATTGGGATTCTG 177 Query 298 ACCCACCCTGGCGAAGGTCGATGGGACGCTCGTCTTCACTCTCTGAAAAACTACGCCTAC 357 | ||| ||||| | | || | | || ||| || | | ||| || | | |||| Sbjct 178 AGCCATCCTGGTG-A---CG--GTG-CG-TCG-GGTC-GT-T-TGAGCAA-T--G-CTAC 221 Query 358 GCGACGAACATATCGTACATCGCAGCTTCGTATGTGAAGTTAGCTGAGACTGGTGGAGCT 417 |||| | |||| ||| || |||||||||||||| ||||||||| |||||||||| Sbjct 222 -AGACG--C--GTCGTCCATTGCGGCTTCGTATGTGAAATTAGCTGAGTCTGGTGGAGCA 276 Query 418 CGTGTGATTCCTCTTATCTACAACGAGCCTGAAGAAA-TCTTGTTTCAGAAGCTAGAATT 476 |||||||| || || ||||| ||||| |||||||||| || | ||||||||||||||||| Sbjct 277 CGTGTGATCCCACTCATCTATAACGATCCTGAAGAAATTC-TCTTTCAGAAGCTAGAATT 335 Query 477 GGTAAATGGTGTGATATTCACAGGTGGTTGGGCTAAA-ACAGGGTTATATTACGATGTTG 535 ||| || ||||||||| |||| ||||||||||||||| | ||| || |||| || | | Sbjct 336 GGTCAACGGTGTGATACTCACTGGTGGTTGGGCTAAAGA-AGGATTGTATTTTGAAATCG 394 Query 536 TGGAGAAAATCTTCAATAAAGTTATGGAGAA-AAATGATGCTGGAGAACATTTTCCGGTG 594 | |||||||||||||||||||| |||| || ||||||||||||||| |||||||| | Sbjct 395 TCAAGAAAATCTTCAATAAAGTTTTGGA-AAGAAATGATGCTGGAGAGCATTTTCCTATA 453 Query 595 TACGCCATGTGTCTTGGATTCGAGATTTTGTCAATGATCATAAGTCAGAACAGAGACATT 654 ||||| || || || ||||| ||| | ||| ||||||||||||||||||||||||||||| Sbjct 454 TACGCTATTTGCCTCGGATTTGAGCTCTTGACAATGATCATAAGTCAGAACAGAGACATT 513 Query 655 CTTGAGAGGTTTAACT-CA-GTAAACTATGCATCAAGTCTCCAGTTTTTTAAAAACGTTA 712 |||| | | | | || | ||| | |||||||||||| ||||| || |||| |||| Sbjct 514 TTTGAAAAAATGGA-TGCAAG-AAATTCTGCATCAAGTCTTCAGTTCCTTGAAAATGTTA 571 Query 713 ATATCGAAGCAACCGTGTTCCAAAGATTTCCTCCAGAGCTGTTGAAAAAGCTCAGTGCAG 772 ||||| ||| |||| | |||||||||||||||||||| ||||||||||| ||| || ||| Sbjct 572 ATATCCAAGGAACCATTTTCCAAAGATTTCCTCCAGAACTGTTGAAAAAACTCGGTACAG 631 Query 773 ACTGTTTGGTTATGCAGAACCA-CTATTTTGGTATCTCACCAGACAA-CTTTCAAGGCAA 830 | ||||| |||||||||||||| | ||| |||||||||||||| || |||| ||||||| Sbjct 632 ATTGTTTAGTTATGCAGAACCATCGGTTT-GGTATCTCACCAGA-AAGCTTTGAAGGCAA 689 Query 831 TCCTTA-TCTGTCTAGTTTCTTCAATATCGTCACAACCA-GCGCCGATAA-AGACAGCAA 887 | || |||||| |||||||| || ||||||||||| | ||| ||||| | ||| ||| Sbjct 690 TG-TTGCTCTGTCCAGTTTCTTTAAAATCGTCACAAC-ATGCGTTGATAACA-ACAACAA 746 Query 888 GACTTT-TGTTTCAACTA-TTCGATCAAAACGATACCCTGTGACCGCCTTCCAATGGCAT 945 | ||| ||||||||| | ||| ||||||| ||| || ||||||| |||||| |||||| Sbjct 747 GG-TTTATGTTTCAAC-AGTTCAATCAAAAAAATATCCAGTGACCGGCTTCCAGTGGCAT 804 Query 946 CCAGAGAAAAATGCATTCGAATGGGGATCATCTGAAATCCCACACTCTGAGGACGCAATT 1005 || ||||||||||||||||| ||||||||||| |||| ||||||||||||||||| || Sbjct 805 CCCGAGAAAAATGCATTCGAGTGGGGATCATCCAAAATTCCACACTCTGAGGACGCGATC 864 Query 1006 CAGGTGACTCAACATGCTGCAAATTATCTAGTCAGTGAAGCCAGAAAGTCAATGAACAGA 1065 ||||||||||| || || |||||| |||||||||||||||| || |||||| ||||||| Sbjct 865 CAGGTGACTCAGCACGCAGCAAATCATCTAGTCAGTGAAGCTAGGAAGTCACTGAACAGG 924 Query 1066 CC--ATCTTCTGAGAAAGTGCTGAGCAATCTCATCTACAACTACAAGCCTACGTACTCCG 1123 || | || || ||||||||||||| ||||||| || | |||||||||||| |||| | Sbjct 925 CCGGA-CT-CTAAGAAAGTGCTGAGTTATCTCATTTATAGCTACAAGCCTACCTACTGTG 982 Query 1124 GATACAAAGGGAGCGGTGACGACGAGGTTTATATTTTCACGTAACAA 1170 ||||| ||||| ||| ||||||||||||| || ||||| ||||| Sbjct 983 GATACGCAGGGAATGGTTACGACGAGGTTTACATCTTCACACAACAA 1029 > Ahg359459 jgi|Araly1|359459|fgenesh1_pg.C_scaffold_262000001 Length=633 Score = 569 bits (308), Expect = 1e-161 Identities = 533/641 (83%), Gaps = 18/641 (3%) Strand=Plus/Plus Query 553 AAAG-TTATGGAGAAAAATGATGCTGGAGAACATTTTCCGGTGTACGCCATGTGTCTTGG 611 |||| || |||||| ||||||||||||||| |||||||| || || | ||| ||||| || Sbjct 1 AAAGCTT-TGGAGAGAAATGATGCTGGAGAGCATTTTCCAGTTTATGGCATTTGTCTCGG 59 Query 612 ATTCGAGATTTTGTCAATGATCATAAGTCAGAACAGAGACATTCTTGAGAGGTTTAACT- 670 ||||||| || ||||||| ||||| ||||||||||||||||||||||| || ||| | | Sbjct 60 ATTCGAGCTTATGTCAATTATCATCAGTCAGAACAGAGACATTCTTGAAAGATTTGA-TG 118 Query 671 CAGTA-AACT-ATGCATCAAGTCTCCAGTTTTTTAAAAACGTTAATATCGAAGCAACCGT 728 ||| | | | ||||||||| || |||||| || | || ||||||||||| | ||| | Sbjct 119 CAG-AGGA-TAATGCATCAACCCTACAGTTTGTTGATAATGTTAATATCGATGGAACATT 176 Query 729 GTTCCAAAGATTTCCTCCAGAGCTGTTGAAAAAGCTCAGTGCAGACTGTTTGGTTATGCA 788 |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| Sbjct 177 ATTCCAAAGATTTCCTCCAGAGCTGTTGAAAAAACTCAGTACAGATTGTTTGGTTATGCA 236 Query 789 GAACCACTATTTTGGTATCTCACCAGACAA-CTTTCAAGGCAATCCTTATCTGTCTAGTT 847 ||| ||| | | ||||||| |||||| ||| |||||||||||||||| | ||||||||| Sbjct 237 GAAACACAAGTATGGTATCACACCAG-CAAACTTTCAAGGCAATCCTGCTTTGTCTAGTT 295 Query 848 TCTTC-AATATCGTCACAACCAGCGCCGAT-AAAGACAGCAAGACTTTTGTTTCAACTAT 905 |||| || ||| |||||||| || ||| ||| |||||||||||| |||||||||| | Sbjct 296 TCTTTGAA-ATCCTCACAACCTGCATAGATGAAA-ACAGCAAGACTTATGTTTCAACTGT 353 Query 906 TCGATCAAA-ACGATACCCTGTGACCGCCTTCCAATGGCATCCAGAGAAAAATGCATTCG 964 | | |||| | ||||||| | || | |||||| |||||||| |||||||||||||| | Sbjct 354 TAAAGCAAAGA-GATACCCAATAACTGGCTTCCAGTGGCATCCTGAGAAAAATGCATTTG 412 Query 965 AATGGGGATCATCTGAAATCCCACACTCTGAGGACGCAATTCAGGTGACTCAACATGCTG 1024 ||||||||||||| | || |||||||||||||| ||||| |||||||| || ||||||| Sbjct 413 AATGGGGATCATCCGCGATTCCACACTCTGAGGATGCAATCCAGGTGACACAGCATGCTG 472 Query 1025 CAAATTATCTAGTCAGTGAAGCCAGAAAGTCAATGAACAGACCATCTTCTGAGAAAGTGC 1084 | | |||| ||||||||||||| || |||||| ||||||||||| | || ||||||||| Sbjct 473 CTAGTTATTTAGTCAGTGAAGCTAGGAAGTCACTGAACAGACCACCATCAAAGAAAGTGC 532 Query 1085 TGAGCAATCTCATCTACAACTACAAGCCTACGTACTCCGGATACAAAGGGAGCGGTGACG 1144 | ||||||||||| |||||||| |||||||| |||| |||||| |||||| ||| ||| Sbjct 533 TAAGCAATCTCATATACAACTATAAGCCTACTTACTGTGGATACGCAGGGAGGGGTTACG 592 Query 1145 ACGAGGTTTATATTTTCACGTAACAAAGATCCC-TTCTCTG 1184 |||||||||| |||||||| ||| |||||||| || |||| Sbjct 593 ACGAGGTTTACATTTTCACACAACCAAGATCCCGTT-TCTG 632 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50398496274 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5