BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G78882.1 Length=2246 Score E Sequences producing significant alignments: (Bits) Value Ahg477051 jgi|Araly1|477051|fgenesh2_kg.2__2181__AT1G78880.1 3563 0.0 Ahg920592 jgi|Araly1|920592|scaffold_101873.1 1533 0.0 > Ahg477051 jgi|Araly1|477051|fgenesh2_kg.2__2181__AT1G78880.1 Length=2243 Score = 3563 bits (1929), Expect = 0.0 Identities = 2156/2261 (95%), Gaps = 33/2261 (1%) Strand=Plus/Plus Query 1 GTGTTCTTCACTTTTTCTTTCCTCAGTTGG-TTGTCCAAACaaaaaaaaTCTCCACCGCT 59 |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||| Sbjct 1 GTGTTCTTCACTTTTTCTTTCCTCAGTTGGTTTGTCC-AA-AAAAAAAATCTCCACCGCT 58 Query 60 CTGAGAG-AAAAAAGTTGGAagaggagagagagagagagCGACAACGCACCAACTGTTGC 118 ||||||| ||||||| ||| || |||| ||||||||| |||||||||||||||||| | Sbjct 59 CTGAGAGAAAAAAAG-TGG--GA--AGAG-GAGAGAGAGAGACAACGCACCAACTGTTAC 112 Query 119 GGCTCAAAGAGATCTCGATCGGGATCCACAAGACGgagatagatagagagagagtgagag 178 |||||||||||||||||||||||||||||| |||||||||||| | |||||| | ||||| Sbjct 113 GGCTCAAAGAGATCTCGATCGGGATCCACACGACGGAGATAGAGATAGAGAGTGAGAGAG 172 Query 179 CTAACGGAAATGGGATCTCAGCTACTTGAGTGTTGCTTCCGTTTCGTCTTCTACTGTCAC 238 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 173 CTAACGGATATGGGATCTCAGCTACTTGAGTGTTGCTTCCGTTTCGTCTTCTACTGTCAC 232 Query 239 TCCCACAGCTCCAACTGTTTTCCTTGAT--TGTTTTTCTTTTATCTC-GGCGTTTTACTC 295 |||||||||||||||||||||||||||| | |||||||||| |||| | | ||| ||| Sbjct 233 TCCCACAGCTCCAACTGTTTTCCTTGATACTCTTTTTCTTTTCTCTCTGTCCATTT-CTC 291 Query 296 --GGAAGCTTACAACACACTCTCTCAGGGATTTGAAATCCTCACGTTTCAGCACATTCTT 353 ||| ||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct 292 ATGGATTCTT--GTTTTACTCTCTCAGGGATTTGAAATCCTCACTTTTCAGCACATTCTT 349 Query 354 TGTGGTTCCCATCTATTCTCTAGCCAG-TTCGGAGTTGCCTGAAGAAATCAAATGGGTTC 412 |||||| |||||||||||||||||||| ||| ||||| |||||||||||||||||||||| Sbjct 350 TGTGGTGCCCATCTATTCTCTAGCCAGTTTC-GAGTTTCCTGAAGAAATCAAATGGGTTC 408 Query 413 GAGATACGCATCTCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGGCCAGAGCAACC 472 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 409 AAGATACGCATCCCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGCCCAGAGCAACC 468 Query 473 CAAAGAAAAGCCTCCAACAATGAGCTCAGTAGCCATGCCATACACCGGTGGTGATATCAA 532 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 469 CAAAGAAAAGCCTCCAACAATGAGCTCGGTAGCCATGCCATACACCGGTGGTGATATTAA 528 Query 533 GAAATCAGGAGAATTGGGGAAGATGTTTGACATTCCGACTGATGGGACTAAGTCAAGGAA 592 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 529 GAAATCAGGAGAATTAGGGAAGATGTTTGACATTCCGACTGATGGGACTAAGTCAAGGAA 588 Query 593 GTCTGGCCCCATAACCGGAGGATCGTCAAGAAGTGGTGCGCAATCAGGTCCAGTGCCTAA 652 ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||| Sbjct 589 GTCTGGCCCCATAACTGGAGGATCTTCAAGAAGTGGTACGCAATCAGGTCCAGTGCCTAA 648 Query 653 TGCAACTGGTCGTATGTCTGGCAATTTAGCTTCTGCTGGTTCAAATTCAATGAAGAAAAC 712 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 649 TGCAACTGGTCGTATGTCTGGTTCTTTAGCTTCTGCTGGCTCAAATTCAATGAAGAAAAC 708 Query 713 AAATTCTGGGCCTTTGTCTAAGCATGGGGAGCCTTTAAAGAAATCCTCTGGTCCGCAATC 772 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 709 AAATTCTGGGCCTTTGTCTAAGCACGGGGAGCCTTTAAAGAAATCCTCTGGTCCGCAATC 768 Query 773 CGGTGGTGTAACAAGGCAAAATTCCGGCCCTATTCCTATACTCCCAACTACAGGTCTCAT 832 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 769 CGGTGGTGTAACAAGGCAAAATTCCGGCCCTATTCCTATACTCCCAACTACAGGTCTCAT 828 Query 833 AACATCTGGGCCAATTACCTCGGGGCCTCTAAATTCATCTGGGGCTCCTAGGAAAATTTC 892 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 829 AACATCTGGGCCAATTACCTCGGGCCCTCTAAATTCATCTGGGGCTCCTAGGAAAATTTC 888 Query 893 TGGTCCTCTAGACTATTCTGGTTCGATGAAGACACATATGCCTTCAGTTGTCCACAACCA 952 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 889 TGGTCCTCTAGACTATTCTGGTTCGATGAAGACACATATGCCTTCAGTTGTCCACAACCA 948 Query 953 GGCGGTAACTACCCTTGCTCCGGAAGATGACTTTTCCTGCATGAAAAGCTTCCCCAAGCC 1012 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 949 GGCGGTAACTACCCTTGCTCCGGAAGATGACTTTTCCTGCATGAAGAGCTTCCCCAAGCC 1008 Query 1013 TGTGCTGTGGCTGGTTATACTTATATTTGTGATGGGGTTCCTCGCTGGAGGCTTCATTCT 1072 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1009 TGTGCTGTGGCTGGTTATACTTATATTTGTAATGGGGTTCCTCGCTGGAGGGTTCATTCT 1068 Query 1073 TGGAGCAGTTCACAATGCAATTCTCCTCATAGTTGTGGCGGTCTTGTTCACAGTTGTTGC 1132 |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| Sbjct 1069 TGGAGCAGTTCACAATGCAATTCTCCTCATTGTTGTTGCGATCTTGTTCACAGTTGTTGC 1128 Query 1133 TGCACTTTTCATTTGGAATATTTCTTGTGAAAGACGTGGTATCACAGATTTCATCGCTCG 1192 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 1129 TGCACTTTTCATTTGGAATATTTCTTGTGAAAGGCGTGGTATCACAGATTTCATTGCTCG 1188 Query 1193 TTATCCGGATGCTGATCTTAGAACTGCCAAAAACGGTCAATATGTGAAGGTCACTGGGGT 1252 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1189 TTATCCTGATGCTGATCTTAGAACTGCCAAAAACGGTCAATATGTGAAGGTCACTGGGGT 1248 Query 1253 GGTCACCTGTGGTAACGTGCCTCTTGAATCATCCTTCCATAGAGTTCCTAGGTGTGTTTA 1312 |||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct 1249 GGTCACTTGTGGTAACGTGCCTCTGGAATCATCCTTCCATAGAGTTCCCAGATGTGTTTA 1308 Query 1313 CACGTCTACTTGTCTATATGAGTACCGTGGATGGGGTTCAAAGCCAGCCAATGCTTCACA 1372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1309 CACGTCTACTTGTCTATATGAGTACCGTGGATGGGGTTCAAAGCCAGCCAATGCTTCACA 1368 Query 1373 TCGTCGCTTTACATGGGGACTGAGATCAGCAGAGAGGCATGTGGTAGACTTCTACATTTC 1432 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1369 TCGTCGCTTCACATGGGGACTGAGATCAGCAGAGAGGCATGTGGTAGACTTCTACATTTC 1428 Query 1433 TGATTTCCAATCTGGGCTCAGGGCATTGGTCAAAACTGGAAACGGTGCAAAGGTAACACC 1492 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1429 TGATTTCCAATCTGGGCTCAGAGCATTGGTCAAAACTGGAAACGGTGCAAAGGTAACACC 1488 Query 1493 GCTTGTCGATGATTCTGTTGTCATCGATTTTAAGCCAGGAAATGAGCAAGCCTCTCCAGA 1552 || |||||||||||||||||||||||||||| |||||| | |||||||||||||||||| Sbjct 1489 TCTCGTCGATGATTCTGTTGTCATCGATTTTAGGCCAGGGAGTGAGCAAGCCTCTCCAGA 1548 Query 1553 CTTTGTAAGGTGGTTGGGTAAAAAGAATCTAACCAATGATGATCGAATAATGCGGCTTAA 1612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1549 CTTTGTAAGGTGGTTGGGTAAAAAGAATCTAACCAATGATGATCGAATAATGCGGCTTAA 1608 Query 1613 AGAAGGGTATATCAAAGAAGGAAGCACAGTAAGTGTGATTGGAGTGGTTCAGAGAAACGA 1672 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1609 AGAAGGGTATATCAAAGAAGGAAGTACAGTGAGTGTGATTGGAGTGGTTCAGAGAAACGA 1668 Query 1673 TAACGTGTTAATGATAGTCCCGACGACAGAACCATTAGCAGCTGGTTGGCAATGGAGTAA 1732 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1669 TAACGTGTTAATGATAGTCCCGACGACAGAACCATTAGCAGCTGGTTGGCAATGGAGTAA 1728 Query 1733 GTGCACATTCCCTGCAAGTCTTGAAGGAATTGTATTGAGATGCGAAGATTCATCGAACGT 1792 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1729 GTGCACATTCCCTGCAAGTCTTGAAGGAATTGTATTGAGATGCGAAGATTCATCGAACGT 1788 Query 1793 AGATGCAATTCCTGTCTGATGCAGTAGTAGTGGAAGTCTTTCTTTTCCTTCTTCTTCCAC 1852 ||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 1789 AGACGCAATTCCTGTCTGATGCAGTAGTAGT--AAGTCTTTCTTTTGCTTCTTCTTCCAC 1846 Query 1853 GGTTGGTAGACGAAAATTTCACTGCTCCACTTCGGCTTCATTAATATTTTTCATGAAATC 1912 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 1847 GGTTGGTAGACGAAAATCTCACTGTTCCACTTCGGCTTCATTAATATTTTTCATGAAATC 1906 Query 1913 TGAAATGTGTTCTTGGTTGGTGGCCTTTTCGCTCTCTACTGATGATGATTCCTTTGGTTG 1972 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct 1907 TGAAATGTGTTCTTGGTTGGTGGC-TTTTCGCTCTCTCCTGATGATGATTCCTTTGGTTG 1965 Query 1973 GTGGTTTATGGTAGTGttttctttttcttctctctttt------aatatttcttattttt 2026 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 1966 GTGGTTTATGGTAGTGTTTTCTTTTTCTTTTCTCTTTTTCCTTTAATATTTCTTATTTTT 2025 Query 2027 tATATCGAGTTATTATTACATTAGGATGATAATGATGATGATGGATGTGGATTTCTTTTC 2086 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2026 TATATCGAGTTATTATTACAGTAGGATGATAATGATGATGATGGATGTGGATTTCTTTTC 2085 Query 2087 TACAACTTAATTTGTGTTGTGGGCACTCTTCTTTGCCTTATGGTTTGTAATTTGTAAAGC 2146 ||| ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| Sbjct 2086 TACGACTTAATTTGTGTTGTGGGCACTCTTCGTTGCCTT-TGGTTTGTAATT-GTAAAGC 2143 Query 2147 TCTGCTAGTTATTCTTTTTT-CGACCTAATTTGTGATCTAATGTAATGGGGATTATCTTT 2205 ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 2144 TCTGCTAGTAATTCTTTTTTTCGACCTAATTTGTGATCTAATGTAATGGG-ATTATCTTT 2202 Query 2206 TTAGTTTGGAATGTTCCCGTTGCATGTGGATTGTATTTATT 2246 |||||||||||||| ||||||||||||||||||| |||||| Sbjct 2203 TTAGTTTGGAATGTACCCGTTGCATGTGGATTGTGTTTATT 2243 > Ahg920592 jgi|Araly1|920592|scaffold_101873.1 Length=1465 Score = 1533 bits (830), Expect = 0.0 Identities = 1241/1437 (86%), Gaps = 38/1437 (3%) Strand=Plus/Plus Query 403 AAATGGGTTCGAGATACGCATCTCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGGC 462 ||||||||||||||||| ||||||| |||||||||||||| || ||||||||||| |||| Sbjct 19 AAATGGGTTCGAGATACCCATCTCATCAGCTCAGCAATGGACTATTTGTGTCTGGTCGGC 78 Query 463 CAGAGCAACCCAAAGAAAAGCCTCCAACAATGAGCT-CAGTAGCCATGCCATACACCGGT 521 | |||||||||||||||| ||||||||| ||||| | ||||||||||||| ||||| ||| Sbjct 79 CTGAGCAACCCAAAGAAAGGCCTCCAACTATGAG-TGCAGTAGCCATGCCTTACACGGGT 137 Query 522 GGTGATATCAAGAAATCAGGAGAATTGGGGAAGATGTTTGACATTCCGA-CTGATGGGAC 580 || || ||||||| ||||||||||||||||||||||||||| | ||| | | ||||| || Sbjct 138 GGCGACATCAAGAGATCAGGAGAATTGGGGAAGATGTTTGATA-TCCCAGCAGATGGTAC 196 Query 581 TAAGTCAAGGAAGTCTGGCCCCATAACC--G-G--------AGGATC--G-TCA--AG-A 623 |||||| ||||||||||| ||||| ||| | | ||| || | ||| | | Sbjct 197 TAAGTCTAGGAAGTCTGGTCCCAT-ACCTGGTGCTCCTTCAAGG-TCTGGCTCATTTGCA 254 Query 624 AGTGGTGCGCAATCAGGTCCA-GTG--CCTAAT-GCAACTGGTCGTATGTCTGGCAATTT 679 | ||| ||||| |||||| ||| ||| || || ||||| |||||||||||| ||| Sbjct 255 GGAACTGCACAATCTGGTCCAGGTGCTCCT-ATGGCCACTGGCCGTATGTCTGGCTCTTT 313 Query 680 AGCTTCTGCTGGTTCAAATTCAATGAAGAAAACAAATTCTGGGCCTTTGTCTAAGCATGG 739 |||||||||||| || ||||||||||||||| ||||| || ||||| ||||||||||| Sbjct 314 AGCTTCTGCTGGCTCTGTTTCAATGAAGAAAACTAATTCCGGACCTTTATCTAAGCATGG 373 Query 740 GGAGCCTTTAAAGAAATCCTCTGGTCCGCAATCCGGTGGTGTAACAAGGCAAAATTCCGG 799 ||||||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||| Sbjct 374 AGAGCCTTTAAAGAAATCATCTGGCCCTCAATCTGGTGGTGTAACTCGGCAAAATTCCGG 433 Query 800 CCCTATTCCTATACTCCCAACTACAGGTCTCATAACATCTGGGCCAATTACCTCGGGGCC 859 |||||||||| || || |||||||||||||||| |||||||| ||||| ||||| || Sbjct 434 TTCTATTCCTATTCTTCCGGCTACAGGTCTCATAACCTCTGGGCCTATTACATCGGGCCC 493 Query 860 TCTAAATTCATCTGGGGCTCCTAGGAAAATTTCTGGTCCTCTAGACTATTCTGGTTCGAT 919 ||| ||||||||||||||||| ||||| |||||||||| ||||||| |||||||| ||| Sbjct 494 TCTGAATTCATCTGGGGCTCCCAGGAAGGTTTCTGGTCCACTAGACTCTTCTGGTTTGAT 553 Query 920 GAAGACACATATGCCTTCAGTTGTCCACAACCAGGCGGTAACTACCCTTGCTCCGGAAGA 979 |||| ||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||||| Sbjct 554 GAAGTCACATATCCCTTCTGTTGTCCACAACCAGGCGGTAACTACCCTTGGTCCAGAAGA 613 Query 980 TGACTTTTCCTGCATGAAAAGCTTCCCCAAGCCTGTGCTGTGGCTGGTTATACTTATATT 1039 ||||||||||||| |||| |||||||| ||||||||||||||||||||| | |||||||| Sbjct 614 TGACTTTTCCTGCCTGAAGAGCTTCCCAAAGCCTGTGCTGTGGCTGGTTGTTCTTATATT 673 Query 1040 TGTGATGGGGTTCCTCGCTGGAGGCTTCATTCTTGGAGCAGTTCACAATGCAATTCTCCT 1099 | ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| Sbjct 674 CATAATGGGGTTCCTTGCTGGAGGCTTCATTCTTGGTGCAGTTCACAACCCAATTCTCCT 733 Query 1100 CATAGTTGTGGCGGTCTTGTTCACAGTTGTTGCTGCACTTTTCATTTGGAATATTTCTTG 1159 | | ||||| ||| ||||||| |||||||||||||| ||||||||||||||||||| ||| Sbjct 734 CGTTGTTGTCGCGATCTTGTTTACAGTTGTTGCTGCGCTTTTCATTTGGAATATTTGTTG 793 Query 1160 TGAAAGACGTGGTATCACAGATTTCATCGCTCGTTATCCGGATGCTGATCTTAGAACTGC 1219 | ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 794 GGGGAGACGTGGTATCACAGATTTCATTGCTCGTTATCCTGATGCTGATCTTAGAACTGC 853 Query 1220 CAAAAACGGTCAATATGTGAAGGTCACTGGGGTGGTCACCTGTGGTAACGTGCCTCTTGA 1279 |||||| |||||||| |||||||||||||||||||| || |||||||| || || ||||| Sbjct 854 CAAAAATGGTCAATACGTGAAGGTCACTGGGGTGGTTACTTGTGGTAATGTACCGCTTGA 913 Query 1280 ATCATCCTTCCATAGAGTTCCTAGGTGTGTTTACACGTCTACTTGTCTATATGAGTACCG 1339 ||||||||||| ||||||||||| ||||| ||||| || || |||||||||||||| || Sbjct 914 GTCATCCTTCCACAGAGTTCCTAGATGTGTGTACACATCGACATGTCTATATGAGTATCG 973 Query 1340 TGGATGGGGTTC-AAAGCCAGCCAATGCTTCACATCGTCGCTTTACATGGGGACTGAGAT 1398 |||||||||||| ||| ||||||||| |||| ||||||| ||| |||||||||||||||| Sbjct 974 TGGATGGGGTTCGAAA-CCAGCCAATTCTTCCCATCGTCACTTCACATGGGGACTGAGAT 1032 Query 1399 CAGCAGAGAGGCATGTGGTAGACTTCTACATTTCTGATTTCCAATCTGGGCTCAGGGCAT 1458 || ||||||| |||||||| ||||| ||||| ||||||||||| ||||||||||| || | Sbjct 1033 CATCAGAGAGACATGTGGTGGACTTTTACATCTCTGATTTCCAGTCTGGGCTCAGAGCCT 1092 Query 1459 TGGTCAAAACTGGAAACGGTGCAAAGGTAACACCGCTTGTCGATGATTCTGTTGTCATCG 1518 | |||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 1093 TAGTCAAAACCGGAAGCGGTGCAAAGGTAACACCTCTTGTAGATGATTCTGTTGTCATCG 1152 Query 1519 ATTTTAAGCCAGGAAATGAGCAAGCCTCTCCAGACTTTGTAAGGTGGTTGGGTAAAAAGA 1578 ||||||||| ||||| ||||||| ||||| || ||||| || ||||| |||| |||| Sbjct 1153 ATTTTAAGCAAGGAAGCGAGCAAGTGTCTCCCGATTTTGTTAGATGGTTAAGTAAGAAGA 1212 Query 1579 ATCTAACCAAT-GATGATCGAATAATGCGGCTTAAAGAAGGGTATATCAAAGAAGGAAGC 1637 ||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 1213 ATCTAAC-AAGCGATGATCGAATAATGCGGCTCAAAGAAGGGTATATAAAAGAAGGAAGC 1271 Query 1638 ACAGTAAGTGTGATTGGAGTGGTTCAGAGAAACGATAACGTGTTAATGATAGTCCCGA-C 1696 ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| || | | Sbjct 1272 ACAGTGAGTGTGATTGGAGTGGTGCAGAGAAACGATAATGTGTTGATGATAGTTCC-ATC 1330 Query 1697 GA-CAGAACCATTAGCAGCTGGTTGGCAATGGAGTA-AGTGCACATTCCCTGCAAGTCTT 1754 | | || ||| |||||||||||||||||||||| | | |||||||||||| |||||||| Sbjct 1331 -ATCTGAGCCACTAGCAGCTGGTTGGCAATGGAGGAGA-TGCACATTCCCTACAAGTCTT 1388 Query 1755 GAAGGAATTGTATTGAGATGCGAAGATTCATCGAACGTAGATGCAATTCCTGTCTGA 1811 |||||||| ||||||||||| ||||| ||||| || || ||||| || || || ||| Sbjct 1389 GAAGGAATCGTATTGAGATGTGAAGACTCATCCAATGTTGATGCCATACCGGTTTGA 1445 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84560343900 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5