BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G79000.2
Length=5832
Score E
Sequences producing significant alignments: (Bits) Value
Ahg477069 jgi|Araly1|477069|fgenesh2_kg.2__2199__AT1G79000.1 8903 0.0
Ahg911475 jgi|Araly1|911475|Al_scaffold_0001_1729 3620 0.0
> Ahg477069 jgi|Araly1|477069|fgenesh2_kg.2__2199__AT1G79000.1
Length=5908
Score = 8903 bits (4821), Expect = 0.0
Identities = 5245/5445 (96%), Gaps = 48/5445 (1%)
Strand=Plus/Plus
Query 1 GATTTGGGAAAACCTGAATTCATTCGCTTTTGATT-TGCCATCTTCTTTCTGGGATTTGT 59
|||| |||||||||||||||| ||||||||||||| | || ||||||||| |||||||||
Sbjct 77 GATTAGGGAAAACCTGAATTCGTTCGCTTTTGATTAT-CCGTCTTCTTTCAGGGATTTGT 135
Query 60 CT-A-CTGCTTGATCCTAATTTCTGACCTCGCTTTTGGTTTGAGTTCACACGTGCCGCAT 117
| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 136 -TGACCTGCTTGATCCTAATTTCTAACCTCGCTTTTGGTTTGAGTTCACACGTGCCGCAT 194
Query 118 CGGCTGTTCACCGGCTTTGTTT-CATTGTGCAGACTCCAATCATCGTACAATCTGTAGCA 176
||||||||||||| |||||||| ||||||||||| ||||||||||||| |||| |||||
Sbjct 195 CGGCTGTTCACCGACTTTGTTTCCATTGTGCAGAATCCAATCATCGTAAAATCACTAGCA 254
Query 177 A-C-C-GGACATTCTCTAAGGTGCT-AAATCAGGAGATGAAATTTGGATACTGTGACTTC 232
| | | ||||| ||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 255 ACCGCAGGACA--GTCTAAGGTGCTCTAATCAGGAGATGAAATTTGGATACGGTGACTTC 312
Query 233 TGGAGGAGAGGAAAGTTATGCAGTGTTTGTTACTGTTAATTACCAGAAGAACTAGGACAA 292
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 313 TGGAGGAGAGGAAAGTTATGCACTGTTTGTTACTGTTAGTTACCAGAAGAACTAGGACAA 372
Query 293 GGCGACGGAGACTGAAGAGGTAGCTATGAATGTTCAGGCTCACATGTC--G---G----- 342
||||||||||||||||||| || ||||||||||||||||||||||||| | |
Sbjct 373 GGCGACGGAGACTGAAGAGATAACTATGAATGTTCAGGCTCACATGTCGGGACAGATATC 432
Query 343 -GG-CAGGTTTCAAACCAAGGGACTATGTCCCAGCAAAATGGGAACTCCCAAATGCAGAA 400
|| |||||| |||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 433 TGGCCAGGTTCCAAACCAAGGAACCATGTCCCAGCAAAATGGGAACTCCCAAATGCAGAA 492
Query 401 TTTAGTTGGTGGTGGTTCAGCTCCTGCTACTGGTGCTGGTTTAGGACCTTCACGCGTTTC 460
|||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||
Sbjct 493 TTTAGTTGGTGGTGGTGCAGCTCCTG---CTGGTGCTGGTTTAGGACCTTCACGTGTTTC 549
Query 461 TCCCGTTGACAATGACATCTTGAAACTTCGGCAGGCTATGCGAATCAGGATTTTCAATAT 520
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 550 TCCCGTTGACAATGACATCTTGAAACTTCGGCAGGCCATGCGAATCAGGATTTTCAATAT 609
Query 521 CTTACAGCAAAAGCAACCATCTCCAGCTGATGAAGCATCAAAGGCTAAATATATGGATGT 580
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 610 CTTACAGCAAAAACAACCATCTCCAGCTGATGAAGCATCAAAAGCAAAATATATGGATGT 669
Query 581 TGCTAGACGCTTAGAGGAGGGGCTGTTTAAAATTGCTAACACAAAGGAAGATTACGTGAA 640
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 670 TGCTAGACGCTTAGAAGAGGGGCTGTTTAAAATTGCTAACACAAAGGAAGATTACGTGAA 729
Query 641 CCCGTCAACCCTTGAACCTCGGCTGGCAAGTCTAATCAAAGGCAGGCAGTTAAATAACTA 700
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 CCAGTCAACCCTTGAACCTCGGCTGGCAAGTCTAATCAAAGGCAGGCAGTTAAATAACTA 789
Query 701 CAATCAGCGACACGCTAATTCTTCTTCGGTTGGAACAATGATACCCACTCCAGGATTACA 760
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 790 CAATCAGCGACACGCTAATTCTTCTTCGGTTGGAACAATGATACCTACTCCAGGATTACA 849
Query 761 ACACAGTGGTGGGAATCCAAATTTGATGATTACTTCCTCAGGT-GATGCTACAATGGCTG 819
||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||
Sbjct 850 ACACAGTGGGGGGAATCCTAATTTGATGATTACTTCCTCA-GTAGATGCTACAATGGCTG 908
Query 820 GAAGTAATAACATCACAACTAGTGCTATGAACACTGGAAACCTGCTAAATTCTGGTGGCA 879
||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 909 GAAGTAATAACATCATAACTAGTGCTATGAGCACTGGAAACCTGCTAAATCCTGGTGGCA 968
Query 880 TGCTTGGAGGTAACCTGTCTAATGGATACCAACATTCATCGAGTAACTTTGGTCTTGGGT 939
|||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
Sbjct 969 TGCTCGGAGGTAACCTATCTAATGGATACCAGCATTCATCGAGTAACTTTGGTCTTGGTT 1028
Query 940 CTGGAGGGAACATGTCATCCATGAGCTCCCAGAGAAATACCGGCCAGATGATGCCTACCC 999
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1029 CTGGTGGGAACATGTCATCCATGAGCTCCCAGAGAAATACTGGCCAGATGATGCCTACCC 1088
Query 1000 CTGGATTTGTCAACAGTAGTACTAATAACAACAGCAATAATGGCCAGTCTTACTTGAGTG 1059
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1089 CTGGATTTGTCAACAGTAGTACAAATAACAACAGCAATAATGGCCAGTCTTACTTGAGTG 1148
Query 1060 TTGAAGCTTCCAACAATAGTGGTGGATTTTCTACTGCTCCCATGATGGTACCTCAGACT- 1118
|||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 1149 TTGAAGCTTCCAACAATAATGGTGGATTTTCTGCTGCTCCCATGATGGTACCTCAGACTC 1208
Query 1119 --------------CAGCAACAGCAACTGAGGCAGGATATTGGTGGCCAAAATAGTCGTA 1164
|||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1209 AGCAGCAGCAGCAACAGCAACAGCAACTGAGGCAAGATATTGGTGGCCAAAATAGTCGTA 1268
Query 1165 TGCTGCAAAACCATGGAAGTCAAATGGGTGTTGGCCTTAGACCTGGAATGCAACAAAAAT 1224
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 TGCTGCAAAACCATGGAAGTCAAATGGGTGTTGGCCTTAGACCTGGAATGCAACAAAAAA 1328
Query 1225 TGTCTAATGTGTCTAACAGCTCCATAAATGGTGGTGTTGGAATGAATGCAAAAAGCGTAG 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 TGTCTAATGTGTCTAACAGCTCCATAAATGGTGGTGTTGGAATGAATGCAAAAAGCGTAG 1388
Query 1285 ATTCAGGTACATCCTACACCAATCCTATCAGAAATTCACAGCAGGCTTATGATAATCTTC 1344
||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||||
Sbjct 1389 ATTCAGGTACATCGTACACTAATCCTACCAGAAATTCACAGCAGGCTTATGATAACCTTC 1448
Query 1345 AGCGTTCAGGAATGCAGGGTGATGGATATGGCACAAACAACTCTGACCCATTCGGATCGG 1404
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1449 AGCGTTCAGGAATGCAGGGTGAAGGATATGGCACAAACAACTCTGACCCATTCGGATCGG 1508
Query 1405 GAAATTTGTATGGTGCTGTAACATCTGTTGGGATGATGACAAATACTCAGAATGCCAATA 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1509 GAAATTTGTATGGTGCTGTAACATCTGTTGGGATGATGACAAATACTCAGAATGCCAATA 1568
Query 1465 CAGCAAGTTTCCAGGCTGTGTCTAGAACTAGCTCTTCTTTGTCACATCAACAGCAGCAGT 1524
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1569 CAGCAAGTTTCCAGTCTGTGTCTAGAAGTAGCTCTTCTTTGTCACATCAACAGCAGCAGT 1628
Query 1525 TTCAGCAACAGCCTAATCGGTTTCAGCAACAACCTAATCAATTTCACcaacagcagcagc 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TTCAGCAACAGCCTAATCGGTTTCAGCAACAACCTAATCAATTTCACCAACAGCAGCAGC 1688
Query 1585 agtttcttcatcaacagcaattgaagcagcaaagccagcagcaacagAGATTTATAAGTC 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1689 AGTTTCTTCATCAACAGCAATTGAAGCAGCAAAGCCAGCAGCAACAGAGATTTATAAGTC 1748
Query 1645 ACGATGCTTTTGGGCAAAATAATGTGGCTTCTGATATGGTTACTCACGTTAAACATGAAC 1704
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1749 ACGATGCTTTTGGGCAAAATAACGTGGCTTCTGACATGGTTACTCACGTTAAACATGAAC 1808
Query 1705 CTGGAATGGAGAACCCTAGCGAGTCTATCCACTCCCAAACTCCTGAGCAATTTCAGCTTT 1764
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1809 CTGGAATGGAGAACCCTAGCGAGTCTATCCACCCCCAAACTCCTGAGCAATTTCAGCTTT 1868
Query 1765 CTCAGTTTCAGAATCAATACCAGAACAATGCAGAAGACCGTCATGCAGGTTCTCAGATTC 1824
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1869 CTCAGTTTCAGAATCAATACCAGAACAATGCAGAAGACCGTCATGGAGGTTCTCAGATTC 1928
Query 1825 TCCCTGTCACAAGTCAGAGTGATATGTGCACATCAGTTCCTCAAAATAGCCAACAGATAC 1884
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1929 TCCCTGTCACTAGTCAGAGTGATATGTGCACATCAGTTCCTCAAAATAGCCAACAGATAC 1988
Query 1885 AGCAGATGTTGCACCCGCATAGTATGGCTTCAGACTCTGTCAACGGTTTTAGCAACCTCT 1944
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 1989 AGCAGATGTTGCACCCGCAGAGTATGGCTTCAGACTCTATCAACGGTTTTAGCAACCTCT 2048
Query 1945 CTGTTGGAGTGAAAACAGAATCTGGGATGCGTGGTCACTGGCAATCTCAGTCACAGGAAC 2004
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2049 CTGTTGGAGTGAAAACAGAATCTGGGATGCATGGTCACTGGCAATCTCAGTCACAGGAAC 2108
Query 2005 ATACTCAAATGTCTAATAGTATGTCGAACGAACGGCACATTCAGGAGGATTTCCGACAAA 2064
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2109 ATACTCAAATGTCTAATAGTATGTCGAACGAACGGCACATTCAGGAGGATTTCCGTCAAA 2168
Query 2065 GAATGTCTGGAACGGATGAAGCTCAGCCCAATAATATGTCTGGAGGCTCAATTATAGGTC 2124
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 2169 GAATGTCTGGAACGGATGAAGCTCAGCCCAATAATATGTCTGGAGGCTCCATCATAGGTC 2228
Query 2125 AAAATCGTGTCTCGACTACATCAGAATCCCTTAATCCCCAAAATCCTACTGCTACCACTT 2184
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2229 AAAATCGTGTCTCCACTACATCAGAATCCCTTAATCCCCAAAATCCTACTACTACCACTT 2288
Query 2185 GTAGAAATGGAAATGGCAACCGGGATCCGAGATTCAAAAATCAACAGAAATGGCTCCTCT 2244
||||| ||||||| || ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2289 GTAGATATGGAAACGGAAACCGGGATCCGAGATTCAGAAATCAACAGAAATGGCTCCTCT 2348
Query 2245 TTCTACGCCATGCTCGCCACTGCAAAGCGCCTGAAGGGAAGTGTCCTGATCGAAATTGTG 2304
||||||||||| ||||| |||||||||||||||||||||||||||| || ||||||||||
Sbjct 2349 TTCTACGCCATTCTCGCAACTGCAAAGCGCCTGAAGGGAAGTGTCCCGACCGAAATTGTG 2408
Query 2305 TTACGGTTCAAAAGCTCTGGAAACACATGGACAGTTGTGCTGCACCTCAATGTTCATATC 2364
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2409 TTACGGTTCAGAAGCTTTGGAAACACATGGACAGTTGTGCTGCACCTCAATGTTCATATC 2468
Query 2365 CTCGTTGCCTCCCCACAAAGACATTGATTAATCATCATCGAAGTTGTAAGGAACCTAACT 2424
||||||||| |||||||||||||||||||||||| ||||||| |||||||||| ||||||
Sbjct 2469 CTCGTTGCCGCCCCACAAAGACATTGATTAATCACCATCGAAATTGTAAGGAATCTAACT 2528
Query 2425 GCCCTGTCTGTATTCCTGTGAAGGCCTACCTACAGCAACAGGCAAATGCACGGTCCCTTG 2484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2529 GCCCTGTCTGTATTCCTGTGAAGGCCTACCTACAGCAACAGGCAAATGCACGGTCCCTTG 2588
Query 2485 CTCGATTAAAAAATGAAACCGATGCAGCCAGGTCAGTGAATGGTGGAGGAATATCAAGTG 2544
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2589 CTCGTTTAAAAAATGAAACCGATGCAGCCAGGTCAGTGAATGGTGGAGGAATATCAAGTG 2648
Query 2545 ACGCTGTACAGACCTCTGCTGGAGCAAAATCTTGTACTTCGCCTGGTGCTGATATTTCAG 2604
| |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct 2649 ATACTGTACAGACCTCTGCTGGAGCAATATCTTGTGCTTCGCCTGGTGCTGCTATTTCAG 2708
Query 2605 GTCATTTGCAACCATCATTAAAACGGTTGAAGGTGGAGCAGTCTTCTCAACCTGTGGATG 2664
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2709 ATCATTTGCAACCTTCATTAAAACGGTTGAAGGTGGAGCAGTCTTCTCAACCTGTGGATG 2768
Query 2665 TTGAGACAGAAAGTTGTAAGAGCTCAGTTGTTTCCGTAACAGAAGCACAATCATCTCAGT 2724
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2769 TTGAGACAGAAAGCTGTAAGAGCTCAGTTGTTTCCGTAACAGAAGCACAATCATCTCAGT 2828
Query 2725 ACGCTGAAAGAAAAGATCATAAGCACAGTGATGTACGTGCACCTTCAAAATATTTTGAAG 2784
||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 2829 ACGTTGAAAGAAAAGATCATAAGCACAGTGACGTACGTGCACCTTCAAAGTATTTTGAAG 2888
Query 2785 TGAAAGCTGAGGTTTCTGACT-TTTCTGTCCAGACACGACCCGGATTCAAAGATACAAAA 2843
||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||
Sbjct 2889 TGAAAGCTGAGGTTTCTGA-TGTTTCTGTCCAGACACGACCCGGATTCAAAGAGACAAAA 2947
Query 2844 ATTGGAATTGCTGAAAATATTCCCAAGCAAAGACCTGTCAGTCAACCTGATAAACAAGAT 2903
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2948 ATTGGAATTACTGAAAATATTCCCAAGCAAAGGCCTGTCAGTCAACCTGATAAACAAGAT 3007
Query 2904 TTATCTGATGTTTCACCTATGCAAGAGACTACCAAAGTGGAGAAAGAACCTGAATCACTT 2963
|| |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 3008 TTGTCTGATGTCTCACCTAGGCAAGAGAATACCAAAGTGGAGAAAGAACCTGAATCACTT 3067
Query 2964 AAGAAAGAAAATCTGGCAGAGTCTACTGAACATACATCAAAATCTGGAAAACCAGAGATA 3023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3068 AAGAAAGAAAATCTGGCAGAGTCTACTGAACATACATCAAAATCTGGAAAACCAGAGATA 3127
Query 3024 AAGGGTGTTTCATTAACTGAATTGTTCACTCCTGAACAAGTGAGAGAACATATCCGTGGT 3083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3128 AAGGGTGTTTCATTAACTGAATTGTTCACTCCTGAACAAGTGAGAGAACATATCCGTGGT 3187
Query 3084 CTCCGTCAGTGGGTTGGGCAGAGTAAAGCCAAAGCAGAAAAGAATCAGGCAATGGAGCAT 3143
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3188 CTCCGTCAGTGGGTTGGCCAGAGTAAAGCCAAAGCAGAAAAGAATCAGGCAATGGAGCAT 3247
Query 3144 TCAATGAGTGAGAATTCCTGCCAACTATGTGCAGTGGAGAAGCTTACCTTTGAGCCACCA 3203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3248 TCAATGAGTGAGAATTCCTGCCAACTATGTGCAGTGGAGAAGCTTACCTTTGAGCCACCA 3307
Query 3204 CCTATTTATTGTACCCCTTGTGGTGCTCGCATCAAGAGAAATGCTATGTACTACACCGTA 3263
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3308 CCTATTTATTGTACCCCTTGTGGTGCTCGCATCAAGAGAAATGCTATGTATTACACCGTA 3367
Query 3264 GGAGCTGGTGACACTCGTCATTACTTTTGTATTCCATGTTATAATGAATCCCGCGGCGAC 3323
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 3368 GGAGCTGGTGACACTCGTCATTACTTTTGTATTCCATGTTATAATGAATCCCGTGGGGAC 3427
Query 3324 ACTATACTCGCTGAAGGGACCCCTATGCCTAAGGCAAGACTCGAGAAAAAGAAAAATGAT 3383
| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 3428 AATATACTCGCCGAAGGGACGCCTATACCTAAGGCAAGACTCGAGAAAAAGAAAAATGAT 3487
Query 3384 GAAGAGACTGAAGAATGGTGGGTCCAATGTGATAAATGTGAGGCGTGGCAGCATCAGATA 3443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3488 GAAGAGACTGAAGAATGGTGGGTCCAATGTGATAAATGTGAGGCGTGGCAGCATCAGATA 3547
Query 3444 TGTGCTTTATTTAATGGGAGAAGGAATGACGGAGGGCAGGCTGAGTATACCTGCCCATAT 3503
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3548 TGTGCTTTATTTAATGGGCGAAGGAATGACGGAGGGCAGGCTGAGTATACCTGCCCATAT 3607
Query 3504 TGCTTTATAGCAGAAGTGGAGCAAAGTAAGAGGAAGCCTTTACCTCAGAGTGCTGTTCTT 3563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3608 TGCTTTATAGCAGAAGTGGAGCAAAGTAAGAGGAAGCCTTTACCTCAGAGTGCTGTTCTT 3667
Query 3564 GGAGCTAAAGACTTACCGCGAACAATTCTCAGTGACCATATAGAGCAGCGGTTGTTTAAG 3623
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3668 GGAGCTAAAGACCTACCGAGAACAATTCTCAGTGACCATATAGAGCAGCGGTTGTTTAAG 3727
Query 3624 AGGCTGAAGCAGGAAAGAACAGAGAGAGCCAGGGCTCAAGGAAAAAGTTATGATGAGATT 3683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3728 AGGCTGAAGCAGGAAAGAACAGAGAGAGCCAGGGCTCAAGGAAAAAGTTATGATGAGATT 3787
Query 3684 CCCACTGCCGAGTCCCTTGTGATTAGAGTTGTTTCATCTGTTGACAAGAAGCTGGAAGTC 3743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3788 CCCACTGCCGAGTCCCTTGTGATTAGAGTTGTTTCATCTGTTGACAAGAAGCTGGAAGTC 3847
Query 3744 AAACCTCGATTTCTTGAAATTTTTCGGGAGGATAGTTACCCAACAGAATTTGCATACAAG 3803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3848 AAACCTCGATTTCTTGAAATTTTTCGGGAGGATAGTTACCCAACAGAATTTGCATACAAG 3907
Query 3804 TCCAAGGTAGTTCTGTTGTTTCAAAAGATTGAAGGCGTAGAAGTATGCTTATTTGGGATG 3863
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3908 TCCAAGGTAGTTCTGTTGTTTCAAAAGATTGAAGGTGTAGAAGTATGCTTATTTGGGATG 3967
Query 3864 TACGTCCAAGAATTCGGTTCTGAATGCGCATTTCCCAATCAACGCCGAGTTTATCTCTCG 3923
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3968 TACGTCCAAGAATTCGGTTCTGAATGCGCATTTCCCAATCAACGCCGAGTATATCTCTCG 4027
Query 3924 TATTTGGATTCTGTCAAGTACTTCAGACCCGAGGTTAGATCTTATAACGGAGAAGCTCTG 3983
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4028 TATTTGGATTCAGTCAAGTACTTCAGACCCGAGGTTAGATCTTATAACGGAGAAGCTCTG 4087
Query 3984 CGTACTTTTGTTTACCACGAAATTCTGATCGGCTACCTAGAATACTGCAAGTTGCGTGGT 4043
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 4088 CGTACTTTTGTTTACCACGAAATTCTGATTGGCTACCTAGAATACTGTAAGTTGCGTGGT 4147
Query 4044 TTCACGAGCTGCTACATATGGGCTTGTCCGCCGCTGAAGGGCGAGGATTATATCTTATAT 4103
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 4148 TTCACGAGCTGCTACATATGGGCTTGTCCGCCGCTGAAGGGCGAGGACTATATCTTATAT 4207
Query 4104 TGTCATCCAGAAATTCAGAAGACGCCAAAATCTGATAAACTACGAGAGTGGTACTTAGCA 4163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4208 TGTCATCCAGAAATTCAGAAGACGCCAAAATCTGATAAACTACGAGAGTGGTACTTAGCA 4267
Query 4164 ATGTTGAGAAAAGCTTCAAAGGAGGGCATTGTTGCAGAAACTATCAATCTATATGACCAT 4223
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 4268 ATGTTGAGAAAAGCTTCAAAGGAGGGCATTGTTGCAGAAACTATAAATCTATATGACCAT 4327
Query 4224 TTTTTCATGCAAACTGGTGAATGTAGAGCTAAGGTTACAGCAGCTAGGCTCCCGTATTTT 4283
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4328 TTTTTTATGCAAACTGGTGAATGTAGAGCTAAGGTTACAGCAGCTAGGCTCCCGTATTTT 4387
Query 4284 GACGGTGACTACTGGCCAGGTGCAGCAGAGGATCTTATATACCAAATGAGTCAAGAAGAA 4343
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 4388 GATGGTGACTACTGGCCAGGTGCAGCGGAGGATCTTATATACCAAATGAGTCAAGAAGAA 4447
Query 4344 GATGGAAGAAAGGGAAATAAGAAAGGAATGCTCAAGAAAACCATTACTAAAAGGGCTCTA 4403
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 4448 GATGGAAGAAAGGGAAATAAGAAAGGAATGCTCAAGAAAACCATTACCAAAAGGGCTTTA 4507
Query 4404 AAAGCTTCTGGTCAGACTGATCTATCTGGGAATGCTTCCAAGGATCTGCTTCTAATGCAT 4463
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 4508 AAAGCTTCTGGTCAGACTGATCTATCTGGGAATGCGTCCAAGGATCTGCTGCTAATGCAT 4567
Query 4464 AGACTCGGTGAGACCATTCACCCGATGAAGGAGGACTTTATCATGGTCCACTTGCAGCCT 4523
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4568 AAACTCGGTGAGACCATTCACCCGATGAAGGAGGACTTTATCATGGTCCACTTGCAGCCT 4627
Query 4524 TCTTGCACTCATTGCTGCATACTGATGGTATCTGGTAATCGTTGGGTCTGCAGCCAGTGC 4583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4628 TCTTGCACTCATTGCTGCATACTGATGGTATCTGGTAATCGTTGGGTCTGCAGCCAGTGC 4687
Query 4584 AAACACTTCCAGATTTGTGACAAGTGTTACGAGGCTGAGCAGAGACGTGAAGACAGGGAA 4643
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4688 AAACACTTCCAGATATGTGACAAGTGTTACGAGGCTGAGCAGAGACGTGAAGACAGGGAA 4747
Query 4644 AGGCATCCTGTTAATTTTAAGGATAAGCATGCGTTGTATCCAGTTGAGATTATGGATATT 4703
|||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||
Sbjct 4748 AGGCATCCTGTTAATTTTAAGGATAAACATGCGCTGTATCCCGTTGAGATTATGGATATT 4807
Query 4704 CCTGCAGATACAAGAGACAAAGATGAAATACTCGAAAGCGAGTTTTTCGACACTAGACAA 4763
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 4808 CCTGCAGATACGAGAGATAAAGATGAAATACTCGAAAGCGAGTTTTTCGACACTAGGCAA 4867
Query 4764 GCATTTCTGAGTCTTTGTCAAGGGAACCATTATCAGTATGATACATTGAGGCGGGCAAAA 4823
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 4868 GCATTTCTGAGTCTTTGTCAAGGGAACCATTATCAGTATGACACGTTGAGGCGGGCAAAA 4927
Query 4824 CATTCGTCCATGATGGTCCTTTATCATCTACATAACCCAACCGCTCCTGCCTTTGTCACG 4883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4928 CATTCGTCCATGATGGTCCTTTATCATCTACATAACCCAACCGCTCCTGCCTTTGTCACG 4987
Query 4884 ACCTGCAATGCGTGTCATCTTGACATTGAAACTGGTCAAGGCTGGCGCTGTGAAGTATGT 4943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4988 ACCTGCAATGCGTGTCATCTTGACATTGAAACTGGTCAAGGCTGGCGCTGTGAAGTATGT 5047
Query 4944 CCAGACTACGATGTGTGCAATGCCTGTTTCAGTAGAGATGGTGGAGTTAATCATCCTCAC 5003
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 5048 CCAGACTACGATGTGTGCAATTCCTGTTACAGTAGAGATGGTGGAGTTAATCATCCTCAC 5107
Query 5004 AAGTTGACGAATCATCCATCTTTAGCTGATCAAAATGCTCAAAACAAAGAAGCGAGGCAA 5063
|||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 5108 AAGTTGACTAATCATCCATCTTTAGCTGATCAAAATGCTCAAAACAAAGAAGCAAGGCAG 5167
Query 5064 TTGCGAGTCTTGCAGCTTAGGAAAATGCTCGATCTTCTGGTACATGCATCACAATGTCGT 5123
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 5168 TTGCGAGTCTTGCAGCTTAGGAAAATGCTTGATCTTCTGGTACATGCATCACAATGTCGT 5227
Query 5124 TCGGCACATTGTCAATATCCGAATTGCCGGAAAGTGAAAGGGCTATTCCGACATGGTAT- 5182
||| |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct 5228 TCGCCACATTGTCAATATCCTAATTGCCGGAAAGTGAAGGGGCTGTTCCGACATGGTATA 5287
Query 5183 CAACTGCAAAGTACGTGCTTCGGGAGGTTGTGTTCTATGCaaaaaaaTGTGGTATCTCCT 5242
|| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 5288 CAG-TGCAAAGTACGCGCTTCGGGAGGGTGTGTTCTATGCAAGAAAATGTGGTATCTCCT 5346
Query 5243 GCAACTCCATGCTCGGGCCTGCAAGGAATCAGAGTGCCATGTACCTCGTTGCAGGGACCT 5302
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 5347 GCAACTCCATGCTCGGGCCTGCAAGGAATCCGAGTGCCATGTACCTCGTTGCAGGGACCT 5406
Query 5303 AAAGGAGCATCTGAGAAGATTACAGCAGCAATCAGATTCACGGCGCAGAGCAGCTGTAAT 5362
||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 5407 GAAGGAACATCTTAGAAGATTACAGCAGCAATCAGATTCACGGCGAAGAGCAGCTGTAAT 5466
Query 5363 GGAAATGATGAGACAAAGAGCTGCAGAAGTCGCTGGGGGCTCAGG 5407
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5467 GGAAATGATGAGACAAAGAGCTGCAGAAGTCGCTGGGGGCTCAGG 5511
Score = 108 bits (58), Expect = 6e-22
Identities = 103/122 (84%), Gaps = 13/122 (11%)
Strand=Plus/Plus
Query 5569 cacacacacacTTGC-C-CACTTCTATTTTTGGTAATTTATTGTATTTTTGTAAAATTGA 5626
||| ||||||||||| | ||||| | |||||||||||||||||||||||||||||||||
Sbjct 5770 CACGCACACACTTGCTCTCACTT-T-TTTTTGGTAATTTATTGTATTTTTGTAAAATTGC 5827
Query 5627 CATTTCTGATTCGGGAATGGCAAGAGTGTAACATATACAGTACGTTAACGTGtttttttt 5686
|| |||||||| |||| ||||||| ||||| | |||| || | ||||||||||| ||
Sbjct 5828 CACTTCTGATTTGGGAGTGGCAAG--TGTAA-A-ATAC-GT---T-AACGTGTTTTTCTT 5878
Query 5687 tt 5688
||
Sbjct 5879 TT 5880
> Ahg911475 jgi|Araly1|911475|Al_scaffold_0001_1729
Length=5058
Score = 3620 bits (1960), Expect = 0.0
Identities = 3375/4045 (83%), Gaps = 150/4045 (4%)
Strand=Plus/Plus
Query 1414 ATGGTGCTGTAACATCTGTTGGGATGATG-ACAAATACTCAGAATGCCAATACAGCAAGT 1472
|||| ||| ||||||| | ||||| || | |||||| |||||||| |||||||||||||
Sbjct 1091 ATGGAGCTATAACATCGGCTGGGACGA-GAACAAATGCTCAGAATATCAATACAGCAAGT 1149
Query 1473 TTCCAGGCTGTGTCTAGAACTAGCTCTTCTTTGTCACATCAACAGCAGCAGTTTCAGCAA 1532
|||||| ||||||| ||| |||||| ||| ||||||||||||| | || |||||||||
Sbjct 1150 TTCCAGCCTGTGTCCAGAGTTAGCTCCTCTCTGTCACATCAACA--A-CAATTTCAGCAA 1206
Query 1533 CAGCCTAATCGGTTTCAGCAACAACCTAATCA-ATTTCACcaacagcagcagcagtttct 1591
| ||||||||| |||||||||||||| ||||| | |||| || ||||||||||| ||||
Sbjct 1207 CCGCCTAATCGATTTCAGCAACAACCAAATCAGA-TTCAACAGCAGCAGCAGCAATTTC- 1264
Query 1592 tc-atcaaca-gcaattgaagcagcaaagc-cagcagcaacagAGATTTATAAGTCACGA 1648
|| ||||| | | ||||||||||||| | | | ||||||||| ||||| ||||| || |
Sbjct 1265 TCAATCAA-AGGAAATTGAAGCAGCAGA-CTCTGCAGCAACATAGATTAATAAG-CA--A 1319
Query 1649 TGCT--TTTGGGCAAAA-T-AATGTGGCTTCTGATATGGTTACTCACGTTAAACATGAAC 1704
|||| ||||| |||| | || |||| ||| || ||| ||||| | || ||||||||||
Sbjct 1320 TGCTGGCTTGGGGAAAACTCAA-GTGGATTCAGACATGATTACTAAGGTGAAACATGAAC 1378
Query 1705 CTGGAATGGAGAACCCTAGCGAGTCTATC-CACTCCCAAAC-TCCTGAGCAATTTCAGCT 1762
|| | | ||| | | || ||| | ||||||||| | | |||| | ||| |||||
Sbjct 1379 CT-G-A--GAG-----T--C-AGGCTA-CGCACTCCCAAGCAT-CTGAACGATTCCAGCT 1424
Query 1763 TTCTCAGTTTCAGAATCAATACCAGAACAATGCAGAAGACCGTCATGCAGGTTCTCAGAT 1822
||||||| | ||||||||||| ||||| || ||||||| | ||||||| ||||| |
Sbjct 1425 TTCTCAGCTCCAGAATCAATATCAGAATTCTGGAGAAGACTGCCATGCAGACGCTCAGCT 1484
Query 1823 TCTCCCTGTCACAAGTCAGAGTGATATGTGCACATCAGTTCCTCAAAATAGCCAACAGAT 1882
|||||| |||| ||||||| ||||||| |||||| || | ||||||| ||||||||||||
Sbjct 1485 TCTCCCAGTCAAAAGTCAGGGTGATATATGCACACCACTCCCTCAAAGTAGCCAACAGAT 1544
Query 1883 ACAGCAGATGTTGCACCCGCATAGTAT-GGCTTCAGACTCTGTCAACGGTTTTAGCAACC 1941
||||| ||| |||||||||| | ||| || ||| || |||| |||| |||||||||| |
Sbjct 1545 TCAGCAAATGCTGCACCCGCAGAATATAGG-TTCTGATTCTGGCAACAGTTTTAGCAATC 1603
Query 1942 TCT-CTGTTGGAGTGAAAA-CAGAATCTGGGAT--GCGTGGTCACTGGCAATCTC-AGTC 1996
| | |||||||||| |||| ||||||| || || ||||| |||| || | ||||
Sbjct 1604 T-TGCTGTTGGAGT-AAAATCAGAATC--CAATCCACGAGGTCAGTGGCCTTC-CAAGTC 1658
Query 1997 ACAGGAACATACTCAAATGTCTAATAG-TATGTCGAA-CGAACGGCACATTCAGGAGGAT 2054
|||||| ||||||||||||||||| | ||| || || ||| ||||| ||||||||||
Sbjct 1659 TCAGGAAAATACTCAAATGTCTAAT-GCTATTTC-AAGTGAAAAGCACAGTCAGGAGGAT 1716
Query 2055 TTCCGACAAAGAATGT-CTGGAACGGATGAAGCTCAGCCCAATAATATGTCTGGAGGCTC 2113
||||| |||||||| | | |||| |||||||||||| || |||||| || ||| ||| ||
Sbjct 1717 TTCCGTCAAAGAAT-TACCGGAATGGATGAAGCTCAACCTAATAATTTGACTGAAGGGTC 1775
Query 2114 AATTATAGGTCAAAATCGTGTC-TCGACTACATCAGAATCCCTTAATCCCCAAAATCCTA 2172
|||| |||||||||| | | || |||| ||| ||||||| |||| |||||| |||
Sbjct 1776 TGTTATTGGTCAAAATCAT-ACTTCTACTATATCGGAATCCCATAATTTGCAAAATTCTA 1834
Query 2173 CTGCTACCACTTGTAGAAATGGAAATGGCAA-CCGGGAT-CCGAGATTCAAAAATCAACA 2230
|| |||||| |||||| |||||||| | || | ||| || || ||||||||||||||
Sbjct 1835 TTGGTACCACATGTAGATATGGAAAT-GTAAGTCACGATCCCAAG-TTCAAAAATCAACA 1892
Query 2231 GAAATGGCTCCTCTTTCTACGCCATGCTCGCCA-CTGCAAAGCGCCTGAAGGGAAGTGTC 2289
|| ||||||||| ||||| || ||||| || | |||||| | || | ||||||||| |
Sbjct 1893 GAGATGGCTCCTGTTTCTTCGTCATGCACG-GAGTTGCAAACCACCAGGAGGGAAGTG-C 1950
Query 2290 C-TGATCGAAATTGTGTTACGGTTCA-AAAGCTCTGGAAACACATGGACAGTTGTGCTGC 2347
| |||| |||||| || |||||||| ||| || |||| |||||||||| |||||||
Sbjct 1951 CAAGATCAAAATTGCGTAACGGTTCAGAAA-CTATGGAGTCACATGGACAACTGTGCTG- 2008
Query 2348 A-CCTCAATGTTCATATCCTCGTTG-CCTCCCCACAAAGACATTGATTAATCATC-ATCG 2404
| ||||| |||| ||||| || || | | | ||||||| |||||||| || | ||
Sbjct 2009 ATCCTCAGTGTTTGTATCCCCGCTGTCGT-CACACAAAGGCATTGATTGGCCA-CTATAA 2066
Query 2405 AAGTTGTAAGGAACCTAAC--TGCCCTGTCTGTATTCCTGTGAAGGCCTACCTACAGCAA 2462
|| || ||||| || || ||||| |||||| | || |||||| |||| | ||||||
Sbjct 2067 AAACTGCAAGGATCC--ACGGTGCCCCGTCTGTGTGCCAGTGAAGACCTA--T-CAGCAA 2121
Query 2463 CAGGCAAATGCACG-GTCCCTTGCTCGATTAAAAAATGAAA-CCGATGCAGCCAGGTCAG 2520
|| || |||| || | |||| || || |||||||| |||| | | ||| | ||| ||||
Sbjct 2122 CAAGCTAATGTGCGCG-CCCTGGCCCGTTTAAAAAACGAAAGCAG-TGCTGTCAGCTCAG 2179
Query 2521 TGAATGGTGGAGGAATATCAAGTGACGCTGTACAGAC-CT-CTGCTGGAGCAAAATCTTG 2578
||||| | | | |||||| ||| | ||| | | || || ||| | ||| |
Sbjct 2180 TGAATAGACCTGTAGTATCAAATGATTCACTAC-G-CGCTAATGGGGGATCGGTTTCTGG 2237
Query 2579 TACTTCGCCTGGTGCTGATA-TTTCAGGTCATTTGCAACCATCATTAAAACGGTTGAAGG 2637
||| | | | ||||||||| ||| || | |||||||||| |||||||| ||||||||||
Sbjct 2238 TACCCCTCGTTGTGCTGATACTTT-AGATAATTTGCAACCTTCATTAAAGCGGTTGAAGG 2296
Query 2638 TGGAGCAGTCTTCTCAACCTGTGGAT-GTTGAGACAGAAAGTTGTAAGAGCT-CAGTTGT 2695
|||||||||||| |||||| |||| | | |||| ||||||||||| |||| || ||||
Sbjct 2297 TGGAGCAGTCTTTTCAACCAGTGG-TCCCTAAGACTGAAAGTTGTAAAAGCTCCA-TTGT 2354
Query 2696 TTCCGTAACAGAAGCACAATCATCTCAGTACGCTGAAAGAAAAGATCATAAGCACAGTGA 2755
||| |||||| ||| ||| ||| || | ||||||||||| ||||||| || | ||
Sbjct 2355 TTCTACAACAGATGCAGAATTTTCTGAGGATGCTGAAAGAAAGGATCATAGGC-C-GT-- 2410
Query 2756 TGTACGTGCACCTTCAAAATATTTTGAAGTGAAAGCT-GAGGTTTCTGACT-TTTCTG-T 2812
|| | || || | || || |||||||||| | || || |||| | |||||| |
Sbjct 2411 TG-AAGT-CA-----GAGAT-CTTGGAAGTGAAAG-TGGAAATTCCTGA-TATTTCTGTT 2460
Query 2813 CCAGACACGACCCGG-ATTCAAAGATACAAAAATTGGAA--TTGCTGAAAATATTCCCAA 2869
| || || || ||| | ||||||| || |||| | ||| || ||||||| |||||||
Sbjct 2461 CAAG-CAGGATTCGGCA-TCAAAGAAACGAAAAGT-GAACCTT-TTGAAAATGTTCCCAA 2516
Query 2870 G-CAAAGACCTGTCAGTCAACCTGATAAACAAGATTTATCTGATGTTTCACCTATGCAAG 2928
| | ||| ||||||||| |||| | |||||| | |||||||| || || || | |||||
Sbjct 2517 GCCTAAG-CCTGTCAGTGAACCAGGTAAACATGGTTTATCTGGTGACTCGCCAAAGCAAG 2575
Query 2929 -AGACTACCAAAGTGGAGAAAGAACCTGAATC-ACTTAAGAAAGAAAATCTGGCAGAGTC 2986
| || | |||| ||||||||| |||| | | | ||||||||| |||||| |||||
Sbjct 2576 AAAAC-ATCAAAACGGAGAAAGAGCCTGGA-CGGCCGAAGAAAGAAGATCTGGTGGAGTC 2633
Query 2987 TACTGAACATACATCAAAATCTGGAAAACCAGAGATAAAGGGTGTTTCATTAACTGAATT 3046
| |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 2634 TCCTGAACTTACATCAAAATCTGGAAAACCAAAGATAAAGGGTGTTTCTTTAACTGAATT 2693
Query 3047 GTTCACTCCTGAACAAGTGAGAGAACATATCCGTGGTCTCCGTCAGTGGGTTGGGCAGAG 3106
||||||||| |||||||||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct 2694 GTTCACTCCCGAACAAGTGAGAGAGCATATTCGTGGTCTTCGTCAGTGGGTTGGCCAGAG 2753
Query 3107 TAAAGCCAAAGCAGAAAAGAATCAGGCAATGGAGCATTCAATGAGTGAGAATTCCTGCCA 3166
||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct 2754 TAAAGCCAAAGCAGAAAAGAATCAGGCGATGGAGAATTCGATGAGTGAGAATTCCTGCCA 2813
Query 3167 ACTATGTGCAGTGGAGAAGCTTACCTTTGAGCCACCACCTATTTATTGTACCCCTTGTGG 3226
||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 2814 GTTATGTGCGGTGGAGAAGCTTACATTTGAGCCACCACCTATTTATTGTACTCCTTGTGG 2873
Query 3227 TGCTCGCATCAAGAGAAATGCTATGTACTACACCGTAGGAGCTGGTGACACTCGTCATTA 3286
|||||| |||||||| ||||| |||||||| || || |||| |||||| |||||||||||
Sbjct 2874 TGCTCGAATCAAGAGGAATGCGATGTACTATACTGTTGGAGGTGGTGAAACTCGTCATTA 2933
Query 3287 CTTTTGTATTCCATGTTATAATGAATCCCGCGGCGACACTATACTCGCTGAAGGGACCCC 3346
|||||||||||| ||||||||||||||||| || |||| ||| ||||||||||||| |
Sbjct 2934 CTTTTGTATTCCCTGTTATAATGAATCCCGAGGAGACAGTATTCTCGCTGAAGGGAAGTC 2993
Query 3347 TATGCCTAAGGCAAGACTCGAGAAAAAGAAAAATGATGAAGAGACTGAAGAATGGTGGGT 3406
|| || |||| || |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2994 AATACCAAAGGAAAAACTCGAGAAAAAGAAAAACGATGAAGAGACTGAAGAATGGTGGGT 3053
Query 3407 CCAATGTGATAAATGTGAGGCGTGGCAGCATCAGATATGTGCTTTATTTAATGGGAGAAG 3466
||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||| | ||
Sbjct 3054 CCAATGTGATAAATGTGAGGCCTGGCAGCATCAAATATGTGCTCTATTTAATGGGCGGAG 3113
Query 3467 GAATGACGGAGGGCAGGCTGAGTATACCTGCCCATATTGCTTTATAGCAGAAGTGGAGCA 3526
|||||| || ||||| |||||||||||||||||| |||||| |||| || ||||||||
Sbjct 3114 GAATGATGGGGGGCAAGCTGAGTATACCTGCCCAAATTGCTATATAATTGAGGTGGAGCA 3173
Query 3527 AAGTAAGAGGAAGCCTTTACCTCAGAGTGCTGTTCTTGGAGCTAAAGACT-TACCGCGAA 3585
|| | |||| |||||||||| ||||||||||||||||||||| ||||| | | || |||
Sbjct 3174 AAATGAGAGAAAGCCTTTACTTCAGAGTGCTGTTCTTGGAGCGAAAGA-TCTGCCAAGAA 3232
Query 3586 CAATTCTCAGTGACCATATAGAGCAGCGGTTGTTTAAGAGGCTGAAGCAGGAAAGAACAG 3645
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct 3233 CAATTCTCAGTGACCATATAGAGCAGCGGTTGTTTAAAAGGCTGAAGCAGGAAAGGACTG 3292
Query 3646 AGAGAGCCAGGGCTCAAGGAAAAAGTTATGATGAGATTCCCACTGCCGAGTCCCTTGTGA 3705
|||||||||||| |||||||| |||||||||||||||||| ||||| || |||||||||
Sbjct 3293 AGAGAGCCAGGGTTCAAGGAACAAGTTATGATGAGATTCCAACTGCTGAATCCCTTGTGG 3352
Query 3706 TTAGAGTTGTTTCATCTGTTGACAAGAAGCTGGAAGTCAAACCTCGATTTCTTGAAATTT 3765
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3353 TTAGAGTTGTTTCATCTGTTGACAAGAAGCTGGAAGTCAAATCTCGATTTCTTGAAATTT 3412
Query 3766 TTCGGGAGGATAGTTACCCAACAGAATTTGCATACAAGTCCAAGGTAGTTCTGTTGTTTC 3825
|||||||||||| || || ||||||||| |||| ||||||||||| ||||||||||| |
Sbjct 3413 TTCGGGAGGATAATTTTCCGACAGAATTTCCATATAAGTCCAAGGTGGTTCTGTTGTTCC 3472
Query 3826 AAAAGATTGAAGGCGTAGAAGTATGCTTATTTGGGATGTACGTCCAAGAATTCGGTTCTG 3885
| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||| || || |
Sbjct 3473 AGAAGATAGAAGGTGTAGAAGTATGCTTGTTTGGGATGTATGTCCAAGAATTTGGATCCG 3532
Query 3886 AATGCGCATTTCCCAATCAACGCCGAGTTTATCTCTCGTATTTGGATTCTGTCAAGTACT 3945
|||| || ||| ||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 3533 AATGTTCAAATCCTAATCAACGCCGTGTTTATCTCTCGTATTTGGATTCTGTTAAGTACT 3592
Query 3946 TCAGACCCGAGGTTAGATCTTATAACGGAGAAGCTCTGCGTACTTTTGTTTACCACGAAA 4005
| ||||| || ||| |||| ||| ||||| |||||||| ||||| |||||||||||||
Sbjct 3593 TTAGACCTGATATTAAATCTGCTAATGGAGAGGCTCTGCGCACTTTCGTTTACCACGAAA 3652
Query 4006 TTCTGATCGGCTACCTAGAATACTGCAAGTTGCGTGGTTTCACGAGCTGCTACATATGGG 4065
|||| || || ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3653 TTCTTATTGGTTACCTGGAATACTGCAAATTGCGTGGTTTCACGAGCTGCTACATATGGG 3712
Query 4066 CTTGTCCGCCGCTGAAGGGCGAGGATTATATCTTATATTGTCATCCAGAAATTCAGAAGA 4125
||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||||| |
Sbjct 3713 CTTGTCCACCACTGAAGGGCGAGGATTATATCCTATATTGCCATCCAGAAATTCAGAAAA 3772
Query 4126 CGCCAAAATCTGATAAACTACGAGAGTGGTACTTAGCAATGTTGAGAAAAGCTTCAAAGG 4185
| ||||| || ||||||||||| || ||||||||||||||||||||||||||| ||||||
Sbjct 3773 CACCAAAGTCCGATAAACTACGGGAATGGTACTTAGCAATGTTGAGAAAAGCTGCAAAGG 3832
Query 4186 AGGGCATTGTTGCAGAAACTATC-AATCTATATGACCATTTTTTCATGCAAACTGGTGAA 4244
| || |||||||| ||||||| | ||||||||||||||||||||| ||||||||||||||
Sbjct 3833 AAGGAATTGTTGCGGAAACTA-CAAATCTATATGACCATTTTTTCTTGCAAACTGGTGAA 3891
Query 4245 TGTAGAGCTAAGGTTACAGCAGCTAGGCTCCCGTATTTTGACGGTGACTACTGGCCAGGT 4304
||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct 3892 TGTAGAGCTAAGGTTACAGCAGCTAGGCTCCCGTACTTCGATGGTGACTACTGGCCAGGT 3951
Query 4305 GCAGCAGAGGATCTTATATACCAAATGAGTCAAGAAGAAGATGGAAGAAAGGGAAATAAG 4364
|||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 3952 GCAGCAGAGGATATCATATACCAAATGAGTCAAGAAGATGATGGTAGAAAGGGAAATAAG 4011
Query 4365 AAAGGAATGCTCAAGAAAACCATTACTAAAAGGGCTCTAAAAGCTTCTGGTCAGA-CTGA 4423
|||||||| ||||||||| |||| || |||||||| || ||||| ||||| || | | ||
Sbjct 4012 AAAGGAATACTCAAGAAACCCATCACAAAAAGGGCGCTTAAAGCATCTGGCCA-ATCGGA 4070
Query 4424 TCTATCTGGGAATGCTTCCAAGGATCTGCTTCTAATGCATAGACTCGGTGAGACCATTCA 4483
||| ||||||||||||||||| |||||||| |||||||||| ||| ||||||||||||||
Sbjct 4071 TCTCTCTGGGAATGCTTCCAAAGATCTGCTGCTAATGCATAAACTTGGTGAGACCATTCA 4130
Query 4484 CCCGATGAAGGAGGACTTT-ATCATGGTCCACTTGCAGCCTTCTTGCACTCATTGCTGCA 4542
|| ||||||||||| ||| |||||||| |||||||||| || |||||| ||||||||
Sbjct 4131 TCCAATGAAGGAGGA-TTTCATCATGGTTCACTTGCAGCATTGTTGCACGCATTGCTGT- 4188
Query 4543 T-ACTGATGGTATCTGGTAATCGTTGGGTCTGCAGCCAGTGCAAACACTT-CCAGATT-T 4599
| |||||||||| |||| ||||||||||| |||||||| |||||| | || |||| || |
Sbjct 4189 TCACTGATGGTAACTGGAAATCGTTGGGTTTGCAGCCAATGCAAAGA-TTACCAG-TTAT 4246
Query 4600 GTGACAAGTGTTACGAGGCTGAGCAGAGACGTGAAGACAGGGAAAGGCATCCTGTTAATT 4659
|||| |||||| |||||||| |||| ||| |||||||| ||||| ||||||||||||
Sbjct 4247 GTGATGGGTGTTATGAGGCTGAACAGAAACGAGAAGACAGAGAAAGACATCCTGTTAATC 4306
Query 4660 TTAAGGATAAGCATG--CGTTGTATCCAGTTGAGATTATGGATATTCCTG-CAGATAC-A 4715
|| ||||| ||| | || | ||| |||||||| |||||||| | | ||||| |
Sbjct 4307 ACAAAGATAAACATAAACTTT-T-TCCTGTTGAGATCGCCGATATTCC-GACGGATACTA 4363
Query 4716 AGAGACAAAGATGAAATACTCGAAAGCGAGTTTTTCGACACTAGACAAGCATTTCTGAGT 4775
|| |||| ||| || ||||| ||||| || ||||| || || || ||||| || ||||||
Sbjct 4364 AG-GACAGAGACGAGATACTTGAAAGTGAATTTTTTGATACAAGGCAAGCGTTCCTGAGT 4422
Query 4776 CTTTGTCAAGGGAACCATTATCAGTATGATACATTGAGGCGGGCAAAACATTCGTCCATG 4835
|| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 4423 CTATGTCAAGGGAACCATTATCAGTATGATACACTGAGGCGGGCAAAACATTCTTCCATG 4482
Query 4836 ATGGTCCTTTATCATCTACATAACCCAACCGCTCCTGCCTTTGTCACGACCTGCAATGCG 4895
||||| ||||||||||| ||||| ||||| |||||||||||||| || || || |||||
Sbjct 4483 ATGGTGCTTTATCATCTGCATAATCCAACTGCTCCTGCCTTTGTGACAACATGTAATGCA 4542
Query 4896 TGTCATCTTGACATTGAAACTGGTCAAGGCTGGCGCTGTGAAGTATGTCCAGACTACGAT 4955
||||| || || ||||||| |||||||||||||||||||||||| || |||||||| |||
Sbjct 4543 TGTCACCTCGATATTGAAAGTGGTCAAGGCTGGCGCTGTGAAGTTTGCCCAGACTATGAT 4602
Query 4956 GTGTGCAATGCCTGTTTCAGTAGAGATGGTGG-AGTTAATCATCCTCACAAGTTGACGAA 5014
||||||||||| |||| || || ||| ||| | | ||||||||||||| ||||| || ||
Sbjct 4603 GTGTGCAATGCTTGTTACAATAAAGAGGGTTGTA-TTAATCATCCTCATAAGTTAACAAA 4661
Query 5015 TCATCCATCTTTAGCTGATCAAAATGCTCAAAACAAAGAAGCGAGGCAATTGCGAGTCTT 5074
|||||||||| ||||||| ||||| ||||| || |||||||| ||||||||||| |||||
Sbjct 4662 TCATCCATCTCTAGCTGAGCAAAACGCTCAGAATAAAGAAGCTAGGCAATTGCGGGTCTT 4721
Query 5075 GCAGCTTAGGAAAATGCTCGATCTTCTGGTACATGCATCACAATGTCGTTCGGCACATTG 5134
|||||| ||||||||||||||||||||||| ||||| || ||||| ||||| ||| |||
Sbjct 4722 GCAGCTCAGGAAAATGCTCGATCTTCTGGTGCATGCGTCGCAATGCCGTTCTCCACTTTG 4781
Query 5135 TCAATATCCGAATTGCCGGAAAGTGAAAGGGCTATTCCGACATGGTATCAACTGCAAAGT 5194
||||||||| |||||||| |||||||| |||||||||||||||||| || ||||||| |
Sbjct 4782 TCAATATCCCAATTGCCGCAAAGTGAAGGGGCTATTCCGACATGGTCTCCGCTGCAAAAT 4841
Query 5195 ACGTGCTTCGGGAGGTTGTGTTCTATGCaaaaaaaTGTGGTATCTCCTGCAACTCCATGC 5254
|||||| || |||||||||||||||||||| ||||||||||||||| |||||||||| ||
Sbjct 4842 ACGTGCCTCAGGAGGTTGTGTTCTATGCAAGAAAATGTGGTATCTCTTGCAACTCCACGC 4901
Query 5255 TCGGGCCTGCAAGGAATC-AGAGTGCCATGTACCTCGTTGCAGGGACCTAAAGGAGCATC 5313
|||||||||||||||||| | |||| |||||||||| ||| ||||||||||||| ||||
Sbjct 4902 TCGGGCCTGCAAGGAATCCA-AGTGTGATGTACCTCGATGCGGGGACCTAAAGGAACATC 4960
Query 5314 TGAGAAGATTACAGCAGCAATCAGATTCACGGCGCAGAGCAGCTGTAATGGAAATGATGA 5373
||||||| ||||| ||||||||||||||||| |||||||| || || ||||| |||||||
Sbjct 4961 TGAGAAGGTTACAACAGCAATCAGATTCACGACGCAGAGCTGCCGTTATGGAGATGATGA 5020
Query 5374 GACAAAGAGCTGCAGAAGTCGCTGG 5398
|||| ||||||||||||||||||||
Sbjct 5021 GACAGAGAGCTGCAGAAGTCGCTGG 5045
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 220924211265
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5