BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G16890.2 Length=1645 Score E Sequences producing significant alignments: (Bits) Value Ahg480568 jgi|Araly1|480568|fgenesh2_kg.3__3269__AT2G16890.2 2222 0.0 Ahg906507 jgi|Araly1|906507|Al_scaffold_0003_3635 1943 0.0 Ahg350625 jgi|Araly1|350625|fgenesh1_pg.C_scaffold_6001218 1003 0.0 > Ahg480568 jgi|Araly1|480568|fgenesh2_kg.3__3269__AT2G16890.2 Length=1637 Score = 2222 bits (1203), Expect = 0.0 Identities = 1518/1664 (91%), Gaps = 46/1664 (3%) Strand=Plus/Plus Query 1 ATCGTGAGAACTAAGAAACACCCAAGAAAACAAACAAACT---TTTTAAAA-AATGTCCG 56 ||||||||||||||||||||||||||||||||| |||||| ||||| |||| | | Sbjct 1 ATCGTGAGAACTAAGAAACACCCAAGAAAACAAGCAAACTAAAAAATAAAATAATGGCAG 60 Query 57 TTTCAACACATCACCACCACGTGGTCCTCTTCCCTTTCATGTCAAAAGGCCACATCATCC 116 ||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 61 TTTCAACACAT---CATCACGTGGTCCTCTTCCCTTACATGTCAAAAGGCCACATCATCC 117 Query 117 CTCTCCTCCAATTCGGTCGTCTCCTCCTCCGTCACCACCGCAAAGAACCAACCA------ 170 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 CCCTCCTCCAATTCGGTCGTCTCCTCCTCCGTCACCACCGCAAAGAACCAACCATCTCCT 177 Query 171 TCACCGTCACCGTTTTCACCACTCCCAAGAACCAACCTTTCATCTCAGACTTCCTCTCGG 230 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 178 TCACCGTCACCGTCTTCACCACTCCTAAGAACCAACCTTTCATCTCAGACTTCCTCTCGG 237 Query 231 ATACGCCGGAGATCAAAGTCATCTCTCTCCCTTTCCCGGAAAACATCACCGGAATCCCTC 290 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 238 ACACGCCGGAGATCAAAGTCATTTCTCTCCCTTTCCCGGAAAACATCACCGGAATCCCTC 297 Query 291 CCGGCGTCGAGAACACCGAAAAGCTCCCATCCATGTCACTTTTCGTCCCCTTCACACGCG 350 |||||||||||| |||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct 298 CCGGCGTCGAGAGCACCGACAAGCTCCCTTCCATGTCACTTTTCGTTCCCTTCACACGCG 357 Query 351 CCACGAAGCTTCTCCAACCTTTCTTCGAAGAAACACTCAAGACTCTTCCAAAAGTTTCGT 410 |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| | Sbjct 358 CCACGAAGCTTCTCCAACCTTTCTTCGAGGAAACACTCAAGAATCTTCCTCAAGTTTCTT 417 Query 411 TCATGGTCTCTGATGGATTCCTCTGGTGGACATCGGAGTCTGCAGCTAAGTTCAACATTC 470 |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 418 TCATGGTCTCCGATGGATTCCTCTGGTGGACATCGGAATCTGCAGCTAAGTTCAAGATTC 477 Query 471 CAAGATTTGTCTCCTACGGCATGAACTCTTACTCCGCCGCTGTCTCCATCTCTGTTTTCA 530 | || || |||| ||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 478 CTAGGTTGGTCTTCTACGGCATGAACTCTTACTCTGCCGCTATCTCCATCTCTGTTTTCA 537 Query 531 AACACGAACTCTTTACCGAACCGGAAAGTAAATCTGATACCGAACCGGTCACTGTACCAG 590 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 538 AACACAAACTCTTTACCGAACCGGAAACTAAATCTGATACCGAACCGGTCACTGTACCGG 597 Query 591 ACTTTCCATGGAT-CAAGGTCAAGAAGTGTGATTTCGACCATGGCACTACCGAGCCGGAA 649 ||||||||||||| | | || ||||||||||||||||||||||| |||||||| || || Sbjct 598 ACTTTCCATGGATCCGA-GTTAAGAAGTGTGATTTCGACCATGGTACTACCGATCCCAAA 656 Query 650 GAATCAGGTGCAGCCCTCGAACTATCTATGGACCAAATCAAGTCGACCACCACAAGCCAT 709 ||||||||||||||| | ||| |||||||||||||||||| ||||| || ||||||||| Sbjct 657 GAATCAGGTGCAGCCTTAGAATTATCTATGGACCAAATCATGTCGAACAATACAAGCCAT 716 Query 710 GGGTTTTTAGTCAATAGCTTCTACGAGCTCGAGTCAGCATTTGTTGATTACAACAACAAC 769 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct 717 GGGTTTTTAGTCAATAGCTTCTACGAGCTCGAATCAACATTTGTTGATTATAACAACAAC 776 Query 770 TCTGGTGATAAACCAAAGTCGTGGTGTGTTGGGCCACTGTGTTTGACAGATCCTCCTAAA 829 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 777 TCTGATGATAGACCAAAGTCGTGGTGTGTTGGGCCACTGTGTTTGACAGATCCTCCTAAA 836 Query 830 CAGGGGAGTGCTAAACCGGCTTGGATTCATTGGTTGGATCAGAAGCGAGAGGAAGGGCGT 889 | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 837 CCGGGGAGGGCTAAACCGGCTTGGATTCATTGGTTGGATCGGAAGCGAGAGGAAGGGCGT 896 Query 890 CCGGTTTTGTACGTGGCGTTTGGAACGCAGGCAGAGATATCGAACAAGCAGCTTATGGAA 949 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 897 CCGGTTTTGTACGTGGCGTTTGGAACGCAGGCAGAGATATCGAACAAGCAGCTTATGGAA 956 Query 950 CTAGCTTTCGGCTTGGAAGATTCAAAGGTGAACTTTCTGTGGGTCACAAGAAAAGATGTG 1009 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 957 CTAGCTTTAGGCTTGGAAGATTCTAAGGTGAACTTTCTGTGGGTCACAAGAAAAGACGTG 1016 Query 1010 GAGGAGATTATTGGAGAAGGATTCAACGATAGAATAAGAGAGAGTGGGATGATAGTGAGA 1069 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1017 GAGGAGATTCTTGGAGAAGGATTCAACGATAGAATAAGAGAGAGTGGGATGATAGTGAGA 1076 Query 1070 GATTGGGTGGACCAATGGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGCCAT 1129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1077 GATTGGGTGGACCAATGGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGCCAT 1136 Query 1130 TGTGGGTGGAACTCAGCACAAGAGAGCATATGTGTCGGGGTCCCATTGTTGGCTTGGCCG 1189 ||||| ||||||||||| |||||||||||||| || |||||||||||| ||||||||||| Sbjct 1137 TGTGGATGGAACTCAGCGCAAGAGAGCATATGCGTTGGGGTCCCATTGCTGGCTTGGCCG 1196 Query 1190 ATGATGGCCGAGCAACCGCTCAATGCGAAGATGGTTGTGGAGGAGATAAAGGTGGGAGTA 1249 ||||||||||||||||||||||||||||| ||||||||||| |||||||| || |||||| Sbjct 1197 ATGATGGCCGAGCAACCGCTCAATGCGAAAATGGTTGTGGATGAGATAAAAGTCGGAGTA 1256 Query 1250 AGAGTTGAAACGGAAGATGGGAGTGTAAAAGGTTTTGTGACAAGAGAAGAACTAAGTGGA 1309 ||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||| || Sbjct 1257 AGAGTTGAAACGGAAGATGGGAGTGTACAAGGATTCGTGACAAGAGAGGAACTAAGTCGA 1316 Query 1310 AAGATTAAAGAACTGATGGAAGGAGAAACGGGGAAAACC-GCAAGAAAGAATGTAAAAGA 1368 |||||||||||||| ||||||||||||||||| |||| | || ||||||||||| ||||| Sbjct 1317 AAGATTAAAGAACTAATGGAAGGAGAAACGGG-AAAATCTGCGAGAAAGAATGTGAAAGA 1375 Query 1369 ATATTCGAAAATGGCGAAAGCGGCTTTGGTCGAAGGGACTGGTTCGTCATGGAAGAATTT 1428 ||| || |||||||| ||||| |||||||||||||||||||||||||| |||||||| || Sbjct 1376 ATACTCAAAAATGGCAAAAGCAGCTTTGGTCGAAGGGACTGGTTCGTCTTGGAAGAACTT 1435 Query 1429 AGATATGATTCTTAAGGAGTTATGTAAGAGTAGAGATTCAAACGGTGCTAGTGAGTAGAG 1488 |||| |||||||||| || |||||||||||||||||||| |||||||||||||||||||| Sbjct 1436 AGATTTGATTCTTAATGACTTATGTAAGAGTAGAGATTCCAACGGTGCTAGTGAGTAGAG 1495 Query 1489 TG--ATTAAGAATTGAATAACTGAACCAGTCTATACGTTTACTAATTAAAACAAGTATTT 1546 || |||||| |||| ||||||||||| | | | || || |||| | Sbjct 1496 TGTGATTAAGGATTGGATAACTGAACC--TA-A-A-----AC---------CA-GTATAT 1536 Query 1547 TCAATATACGTCT-TGTGTAAGTCTTG---G-TTTAGTTGAAAAGATGTTATCGATTACA 1601 |||||||| || ||||||||||||| | ||||||||||||| || | | ||||||| Sbjct 1537 CCAATATACA-CTATGTGTAAGTCTTGTATGGTTTAGTTGAAAAGTTGATCTTGATTACA 1595 Query 1602 ATAACTGACTCTCTCATTTGATAATACTGACTATGATTAATATT 1645 |||| ||||| | |||||||||||| ||||||||||||||||| Sbjct 1596 ATAAATGACT-T-TCATTTGATAATTTTGACTATGATTAATATT 1637 > Ahg906507 jgi|Araly1|906507|Al_scaffold_0003_3635 Length=1449 Score = 1943 bits (1052), Expect = 0.0 Identities = 1307/1430 (91%), Gaps = 18/1430 (1%) Strand=Plus/Plus Query 74 CACGTGGTCCTCTTCCCTTTCATGTCAAAAGGCCACATCATCCCTCTCCTCCAATTCGGT 133 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 22 CACGTGGTCCTCTTCCCTTACATGTCAAAAGGCCACATCATCCCTCTCCTCCAATTCGGT 81 Query 134 CGTCTCCTCCTCCGTCACCACCGCAAAGAACCAACCA------TCACCGTCACCGTTTTC 187 ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 82 CGTCTCCTCCTCCGTCACCACCGCAAAGAACCAACCATCTCCTTCACCGTCACCGTCTTC 141 Query 188 ACCACTCCCAAGAACCAACCTTTCATCTCAGACTTCCTCTCGGATACGCCGGAGATCAAA 247 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 142 ACCACTCCTAAGAACCAACCTTTCATCTCAGACTTCCTCTCGGACGCGCCGGAGATCAAA 201 Query 248 GTCATCTCTCTCCCTTTCCCGGAAAACATCACCGGAATCCCTCCCGGCGTCGAGAACACC 307 || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 202 GTGATTTCTCTCCCTTTCCCGGAAAACATCACCGGAATCCCTCCCGGCGTCGAGAGCACC 261 Query 308 GAAAAGCTCCCATCCATGTCACTTTTCGTCCCCTTCACACGCGCCACGAAGCTTCTCCAA 367 || |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 262 GACAAGCTCCCATCCATGTCACTTTACGTGCCCTTCACACGCGCCACGAAGCTTCTCCAA 321 Query 368 CCTTTCTTCGAAGAAACACTCAAGACTCTTCCAAAAGTTTCGTTCATGGTCTCTGATGGA 427 ||||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||||| Sbjct 322 CCTTTCTTCGAAGAAACACTCAAGAATCTTCCTCAAGTTTCTTTCATGGTCTCCGATGGA 381 Query 428 TTCCTCTGGTGGACATCGGAGTCTGCAGCTAAGTTCAACATTCCAAGATTTGTCTCCTAC 487 ||||||||||||||||| || || |||||||||||||| ||||| || || |||| ||| Sbjct 382 TTCCTCTGGTGGACATCAGAATCCGCAGCTAAGTTCAAGATTCCTAGGTTGGTCTTTTAC 441 Query 488 GGCATGAACTCTTACTCCGCCGCTGTC-TCCATCTCTGTTTTCAAACACGAACTCTTTAC 546 || || ||||||||| || | || ||| | ||||||| |||| ||||| |||||||||| Sbjct 442 GGTATTAACTCTTACGCCTCTGCCGTCGT-CATCTCTACTTTCCAACACAAACTCTTTAC 500 Query 547 CGAACCGGAAAGTAAATCTGATACCGAACCGGTCACTGTACCAGACTTTCCATGGATCAA 606 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 501 CGAACCGGAAATTAAATCTGATACCGAACCGGTCACTGTACCGGACTTTCCATGGATCCA 560 Query 607 GGTCAAGAAGTGTGATTTCGACCATGGCAC-TACCGAGCCGGAAGAATCAGGTGCAGCCC 665 || |||||||||||| |||||||| | | |||||| || || |||||||| |||| | Sbjct 561 TGTTAAGAAGTGTGATCTCGACCAT-GTTCTTACCGATCCAAAACAATCAGGTCCAGCTC 619 Query 666 TCGAACTA-TCTATGGACCAAATCAAGTCGACCACCACAAGCCATGGGTTTTTAGTCAAT 724 ||||||| || || |||||||| | ||||||||||||||||||||||||||||||||| Sbjct 620 ACGAACTATTC-ATAGACCAAATGATTTCGACCACCACAAGCCATGGGTTTTTAGTCAAT 678 Query 725 AGCTTCTACGAGCTCGAGTCAGCATTTGTTGATTACAACAACAA-CTCTGGTGATAAACC 783 || ||||||||||||||||||||||||||||||| |||||| || |||| ||||| ||| Sbjct 679 AGTTTCTACGAGCTCGAGTCAGCATTTGTTGATTGCAACAATAACCTCT-CTGATAGACC 737 Query 784 AAAGTCGTGGTGTGTTGGGCCACTGTGTTTGACAGATCCTCCTAAA-CAGGGGAGTGCTA 842 ||||||||||||||||||||||||||||||||| |||||||||||| | | |||||||| Sbjct 738 AAAGTCGTGGTGTGTTGGGCCACTGTGTTTGACCGATCCTCCTAAATC-GAAGAGTGCTA 796 Query 843 AACCGGCTTGGATTCATTGGTTGGATCAGAAGCGAGAGGAAGGGCGTCCGGTTTTGTACG 902 ||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||| Sbjct 797 AACCGGCTTGGATTCATTGGTTGGACCGGAAGCGAGAAGAGGGGCGTCCGGTTTTGTACG 856 Query 903 TGGCGTTTGGAACGCAGGCAGAGATATCGAACAAGCAGCTTATGGAACTAGCTTTCGGCT 962 |||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| Sbjct 857 TGGCGTTTGGAACGCAGGCAGAGATATCGAACAAGCAGCTCAAGGAACTAGCTTTAGGCT 916 Query 963 TGGAAGATTCAAAGGTGAACTTTCTGTGGGTCACAAGAAAAGATGTGGAGGAGATTATTG 1022 |||||||||| ||||||||||||||||||||||| |||||||| ||||| |||| ||||| Sbjct 917 TGGAAGATTCCAAGGTGAACTTTCTGTGGGTCACGAGAAAAGACGTGGAAGAGACTATTG 976 Query 1023 GAGAAGGATTCAACGATAGAATAAGAGAGAGTGGGATGATAGTGAGAGATTGGGTGGACC 1082 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 977 GAGAAGGATTCAACGATAGAATAAGAGAGAGTGGGATGATAGTGAGAGATTGGGTGGACC 1036 Query 1083 AATGGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGCCATTGTGGGTGGAACT 1142 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1037 AATGGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGCCATTGTGGATGGAATT 1096 Query 1143 CAGCACAAGAGAGCATATGTGTCGGGGTCCCATTGTTGGCTTGGCCGATGATGGCCGAGC 1202 |||| |||||||||||||| || |||||||||||| |||||||||||||||||||||||| Sbjct 1097 CAGCTCAAGAGAGCATATGCGTTGGGGTCCCATTGCTGGCTTGGCCGATGATGGCCGAGC 1156 Query 1203 AACCGCTCAATGCGAAGATGGTTGTGGAGGAGATAAAGGTGGGAGTAAGAGTTGAAACGG 1262 |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1157 AACCATTCAATGCGAAGATGGTTGTGGAGGAGATAAAGGTCGGAGTAAGAGTTGAAACGG 1216 Query 1263 AAGATGGGAGTGTAAAAGGTTTTGTGACAAGAGAAGAACTAAGTGGAAAGATTAAAGAAC 1322 |||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||| Sbjct 1217 AAGATGGGAGTGTAAAAGGTTTCGTGACAAGAGAGGAACTAAGTCGAAAGGTTAAAGAAC 1276 Query 1323 TGATGGAAGGAGAAACGGGGAAAACCGCAAGAAAGAATGTAAAAGAATATTCGAAAATGG 1382 | ||||||||||||||||| |||||||||||||| ||||| |||||||| || ||||||| Sbjct 1277 TAATGGAAGGAGAAACGGGAAAAACCGCAAGAAAAAATGTGAAAGAATACTCAAAAATGG 1336 Query 1383 CGAAAGCGGCTTTGGTCGAAGGGACTGGTTCGTCATGGAAGAATTTAGATATGATTCTTA 1442 | ||||| |||||||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct 1337 CAAAAGCAGCTTTGGTCGAAGGGACTGGTTCGTCTTGGAAGAATTTAGATTTGCTTCTTA 1396 Query 1443 AGGAGTTATGTAAGAGTAGAGATTCAAACGGTGCT-AGTGAGTAGAGTGA 1491 |||||||||| ||||||| ||| ||||||||| | | | ||| |||||| Sbjct 1397 AGGAGTTATGCAAGAGTAAAGAGCCAAACGGTGTTTA-TAAGTTGAGTGA 1445 > Ahg350625 jgi|Araly1|350625|fgenesh1_pg.C_scaffold_6001218 Length=1473 Score = 1003 bits (543), Expect = 0.0 Identities = 1175/1471 (80%), Gaps = 80/1471 (5%) Strand=Plus/Plus Query 50 ATGTCCGTTTCAACACATCACCACCACGTGGTCCTCTTCCCTTTCATGTCAAAAGGCCAC 109 ||| ||||||| | |||| || || ||||| |||||||||| |||||||||||||||| Sbjct 1 ATGGCCGTTTC-A-TCATC-GCATCATGTGGTTCTCTTCCCTTACATGTCAAAAGGCCAC 57 Query 110 ATC-ATCCCTCTCCTCCAATTCGGTCGTCTCCTCCTCCGTCACCA-----------CC-G 156 | | || |||||||||||||||| |||||||||||||||||||| || | Sbjct 58 A-CGATTCCTCTCCTCCAATTCGCCCGTCTCCTCCTCCGTCACCACCGTGTCGTCCCCGG 116 Query 157 CAAAGAACCAACCATC-ACCGTCACCGTTTTCACCACTCCC-AAGAACCAACCTTTCATC 214 | | |||||||||| | |||||||||| |||||||| ||| ||||||||||| ||| || Sbjct 117 CGACGAACCAACCA-CTTCCGTCACCGTCTTCACCAC-CCCAAAGAACCAACCATTCGTC 174 Query 215 TCAGACTTCCTCTCGGA--T-AC-GCCGGAGATCAAAGTCATCTCTCTCCCTTTCCCGGA 270 ||| |||||||||| || | || | | |||||||| ||||| ||||||||||| || Sbjct 175 TCAAACTTCCTCTCCGACGTCACATCATCA-ATCAAAGTAATCTCCCTCCCTTTCCCTGA 233 Query 271 AAACATCACCGGAATCCCTCCCGGCGTCGAGAACACCGAAAAGCTCCCATCCATGTCACT 330 ||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 234 AAACATCGCCGGAATCCCTCCCGGCGTCGAGAACACCGAAAAGCTCCCTTACATGTCACT 293 Query 331 TTTCGTCCCCTTCACACGCGCCACGAAG-CTTCTCCAACCTTTCTTCGAAGAA-ACACTC 388 || ||| |||||||| ||||| || || || ||||| ||||||||||||| | | |||| Sbjct 294 TTACGTGCCCTTCACGCGCGCTACCAAATCT-CTCCAGCCTTTCTTCGAAGCAGA-ACTC 351 Query 389 AAGACTCTTCCA-AAAGTTTCGTTCATGGTCTCTGATGGATTCCTCTGGTGGACATCGGA 447 |||| |||| | ||||| || ||||||||||| ||||||||| | |||||||||||||| Sbjct 352 AAGAATCTTG-AGAAAGTGTCTTTCATGGTCTCCGATGGATTCTTATGGTGGACATCGGA 410 Query 448 GTCTGCAGCTAAGTTCAACATTCCAAGATTTGTCTCCTACGGCATGAACTCTTACTCCGC 507 ||||| ||||| || | ||||| ||| | | || ||||||||||||||| ||| | | Sbjct 411 ATCTGCCGCTAAACTCGAGATTCCGAGACTCGCCTTCTACGGCATGAACTCGTACGCATC 470 Query 508 CGCTGTCTCCATCT-CTGTTTTCAA-ACACGAACTCTTTACCGAACCGGAAAGT---AAA 562 ||| | | | ||| | |||| | |||||| ||||||||| ||||||||||| ||| Sbjct 471 GGCTATGTAC-TCTGCCGTTT-CGGTACACGAGCTCTTTACCAAACCGGAAAGTGTTAAA 528 Query 563 TCTGATACCGAACCGGTCACTGTACCAGACTTTCCATGGATCAAG-GTCAAGAAGTGTGA 621 |||||||| |||||||| |||||||| || ||||||||||| ||| || |||||||| || Sbjct 529 TCTGATACTGAACCGGTTACTGTACCGGATTTTCCATGGAT-AAGTGTTAAGAAGTGCGA 587 Query 622 TTTCGACCATGGCACT-ACCGAGCCGGAAGAATC-AGGTGCAGCCCTCGAACTATCTATG 679 ||||||| || | ||||| ||||| |||| || | |||| | || ||| | ||| Sbjct 588 GTTCGACCC-GGTTGTGACCGAACCGGATCAATCGAG-TCCAGCGTTTGAGCTAGCCATG 645 Query 680 GACCAAATCAAGTCGACCACCACAAGCCATGG-GTTTTTAGTCAATAGCTTCTACGAGCT 738 ||||| || | ||| |||| | ||| | ||| ||| | ||| || || || |||||||| Sbjct 646 GACCATATTATGTCCACCAAGAAAAGTCGTGGAGTTAT-AGTGAACAGTTTTTACGAGCT 704 Query 739 CGAGTCAGCATTTGTTGATTA-CAACAACAACTCTGGTGATAA--A-CCAAAGTCGTGGT 794 |||| || | ||| |||| || | | | || || | || | | |||||| |||||| Sbjct 705 CGAGCCAACGTTTCTTGACTATCGGCT-C--CT-TGATAATGATGAGCCAAAGCCGTGGT 760 Query 795 GTGTTGGGCCACTGTGTTTGACAGATCCTCCTAAACAGGGGAGTGCTAAACCGGCTTGGA 854 |||||||||| |||||||| | |||||||||||| || ||||| |||||||| ||||| Sbjct 761 GTGTTGGGCCTTTGTGTTTGGTAAATCCTCCTAAACCGGAGAGTGATAAACCGGATTGGA 820 Query 855 TTCATTGGTTGGATCAGAAGCGAGAGGAAGGGCGTCCGGTTTTGTACGTGGCGTTTGGAA 914 ||||||||||||| | ||| | ||||||| | |||||||| |||||||||||||||| | Sbjct 821 TTCATTGGTTGGACCGGAAACTAGAGGAAAGATGTCCGGTTATGTACGTGGCGTTTGGTA 880 Query 915 CGCAGGCAGAGATATCGAACAAGCAGCTTATGGAACTAGCTTTCGGCTTGGAAGATTCAA 974 ||||||| |||||||| ||| | ||||| | ||| | || || || ||||||||||| | Sbjct 881 CGCAGGCTGAGATATCAAACGATCAGCTCAAAGAAATTGCATTAGGGTTGGAAGATTCCA 940 Query 975 AGGTGAACTTTCT-GTGGGTCACAAGAAAAGA-TGTGGAGGAGATTAT-TGGAG-A--AG 1028 |||| || ||||| ||||||||| ||||| || | |||| || | || ||||| | || Sbjct 941 AGGTAAA-TTTCTTGTGGGTCACGAGAAAGGACT-TGGAAGA-AGTAACTGGAGGATTAG 997 Query 1029 GATTC-AACGATAGAAT-AAGAGAG-AGTGGGATGATAGTGAGAGATTGGGTGGACCAAT 1085 | ||| || | ||| | || |||| | ||||||||| |||||||||||||| ||||||| Sbjct 998 GGTTCGAAA-AGAGAGTGAA-AGAGCA-TGGGATGATTGTGAGAGATTGGGTAGACCAAT 1054 Query 1086 GGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGCCATTGTGGGTGGAACTCAG 1145 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| | Sbjct 1055 GGGAGATATTGTCACATGAAAGTGTCAAAGGATTTTTGAGTCATTGTGGATGGAACTCGG 1114 Query 1146 CACAAGAGAGCATATGTGTCGGGG-TCCCATTGTTGGCTTGGCCGATGATGGCCGAGCAA 1204 | ||||||||||| || | | || | || | | |||||||| |||||||| ||||| Sbjct 1115 CGCAAGAGAGCATTTGCG-CTGGAATTCCGCTACTCGCTTGGCCAATGATGGCAGAGCAG 1173 Query 1205 CCGCTCAATGCGAAGATGGTTGTGGAGGAGATAAAGGTGGGAGTAAGAGTTGAAACGGAA 1264 || |||||||||||| |||| ||||||||| ||||| | ||||||||| | ||||| ||| Sbjct 1174 CCACTCAATGCGAAGTTGGTAGTGGAGGAGCTAAAGATTGGAGTAAGAATCGAAACAGAA 1233 Query 1265 GATGGGAGTGTAAAAGGTTTTGTGACAAGAGAAGAACTAAGTGGAAAGATTAAAGAACTG 1324 ||||| ||||| ||||| || ||||||||||||||||| ||| ||||| ||||| || || Sbjct 1234 GATGGAAGTGTGAAAGGATTCGTGACAAGAGAAGAACTTAGTCGAAAGGTTAAACAATTG 1293 Query 1325 ATGGAAGGAGAAACGGGGAAAACCGCAA-GAAAGAATGTAAAAGAATATTCGAAAATGGC 1383 ||||||||||| | |||||| || || ||| |||||| ||||| ||| || |||| || Sbjct 1294 ATGGAAGGAGATATGGGGAAGACTATAATGAA-GAATGTGAAAGAGTATGCGGAAATAGC 1352 Query 1384 GAAAGCGGCTTTGG-TCGAAGGGACTGGTTCGTCATGGAAGAATTTAGATATGA-TTCTT 1441 |||| ||||||| || ||||||| ||||| || ||||||||||| ||| | | ||||| Sbjct 1353 GAAAAAAGCTTTGGCTC-AAGGGACCGGTTCTTCTTGGAAGAATTTGGAT-TCACTTCTT 1410 Query 1442 -AAGGAGTTATGTAAGAGTAGAGATTCAAAC 1471 ||| ||| |||||||||| ||| ||||| Sbjct 1411 GAAGC-GTTTTGTAAGAGTATAGAGCCAAAC 1440 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61668106655 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5