BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G21300.1 Length=3009 Score E Sequences producing significant alignments: (Bits) Value Ahg480993 jgi|Araly1|480993|fgenesh2_kg.4__53__AT2G21300.1 4562 0.0 Ahg490663 jgi|Araly1|490663|fgenesh2_kg.7__96__AT4G38950.2 1849 0.0 > Ahg480993 jgi|Araly1|480993|fgenesh2_kg.4__53__AT2G21300.1 Length=2889 Score = 4562 bits (2470), Expect = 0.0 Identities = 2759/2899 (95%), Gaps = 17/2899 (1%) Strand=Plus/Plus Query 1 CAAATACAAAGgagagagagagagaagagGCGCTTCGCTACGAGATTTGCGGGACCAAAT 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CAAATAGAAAGGAGAGAGAGAGAGAAGAGGCGCTTCGCTACGAGATTTGCGGGACCAAAT 60 Query 61 CAATGCCCATTGGTCCCTCCTCCTTCACACTGAGAGAGCCATTGGCCAATTTCCAGATAT 120 ||||||||||||||||||| |||||||||||| |||||||| ||||||||||| | | || Sbjct 61 CAATGCCCATTGGTCCCTCTTCCTTCACACTGTGAGAGCCAATGGCCAATTTCTACAGAT 120 Query 121 AgacgacgacgacgacgaAGCAGCAGCATGATGATGGAGTAACTAGACGAAGACGAAGAA 180 | ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct 121 --A-GACGACGACGACGAAGCAGCAGCATGATGATGGAGTAACCAGACGAAGAAGAAGAA 177 Query 181 GATTAGAGGAGCTTCTGAAGAATCACTTTGAGGAAGAAGACA-ACATATCTCACAAGTGA 239 ||||| | ||||||||||||||||||||||| |||||||| | ||| | ||||||||||| Sbjct 178 GATTACAAGAGCTTCTGAAGAATCACTTTGAAGAAGAAGA-AGACAAAACTCACAAGTGA 236 Query 240 GCAATGGGAGCGATTGCTGGAGAAGAGCTGAAGAAAATGGAGAAGACACAGGTGCATGTT 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 237 GCAATGGGAGCGATTGCTGGAGAAGAGCTGAAGAAAATGGAGAAGACACAGGTGCATGTT 296 Query 300 GCCCGGGAAGAGAAGATATTGGTTCTGGTGAGACTGAGACCTCTGAACGAGAAAGAGATC 359 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 297 GCCCGGGAAGAGAAGATATTGGTTCTGGTGAGACTGAGACCTCTGAATGACAAAGAGATC 356 Query 360 TTGGCTAATGAAGCTGCGGACTGGGAATGCATCAACGACACCACCGTATTGTACAGAAAC 419 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 357 TTGGCTAATGAAGCTGCGGATTGGGAATGCATCAACGACACCACCGTATTGTACAGAAAC 416 Query 420 ACGTTGCGTGAGGGCTCAACTTTTCCTTCTGCATACTCATTTGATAGAGTGTACCGAGGT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 417 ACGTTGCGTGAGGGCTCAACTTTTCCTTCTGCATACTCATTTGATAGAGTGTACCGAGGT 476 Query 480 GAATGCCCAACCAGACAAGTTTACGAAGATGGCCCCAAGGAAGTTGCTCTCTCGGTGGTC 539 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct 477 GAATGCCCAACCAGACAAGTTTACGAAGATGGCCCTAAGGAAGTTGCTCTCTCTGTTGTC 536 Query 540 AAAGGAATTAACTCTAGTATTTTCGCGTATGGTCAGACGAGCAGTGGAAAGACATACACC 599 ||||||||||| |||||||||||||| |||||||||||||||||||||||||| || ||| Sbjct 537 AAAGGAATTAATTCTAGTATTTTCGCATATGGTCAGACGAGCAGTGGAAAGACGTATACC 596 Query 600 ATGTCTGGTATAACTGAGTTTGCTGTGGCTGACATATTTGATTATATATTTAAGCATGAA 659 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 597 ATGTCTGGTATAACTGAGTTTGCTGTGGCTGACATATTTGATTATATTTTTAAGCATGAA 656 Query 660 GATAGGGCATTTGTTGTGAAATTTTCGGCTATAGAGATCTACAATGAGGCCATCCGCGAT 719 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct 657 GATAGGGCATTTGTTGTGAAGTTTTCAGCTATAGAGATCTACAATGAGGCCATCCGAGAT 716 Query 720 CTTCTCAGCCCAGATAGTACACCACTGAGGCTACGAGATGACCCTGAGAAAGGGGCCGCC 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 717 CTTCTCAGCCCAGATAGTACACCACTGAGGCTACGAGATGACCCTGAGAAAGGGGCCGTC 776 Query 780 GTTGAAAAAGCCACAGAGGAAACGCTGAGAGATTGGAACCATTTGAAGGAACTTATCTCA 839 |||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||| Sbjct 777 GTTGAAAAAGCCACAGAGAAAACCCTGAGAGACTGGAACCATTTGAAGGATCTTATCTCA 836 Query 840 GTTTGTGAAGCACAGCGGAAGATTGGTGAAACTTCACTAAATGAGAGAAGTTCAAGATCT 899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 837 GTTTGTGAAGCACAGCGGAAGATTGGTGAAACTTCACTAAATGAGAGAAGTTCAAGATCT 896 Query 900 CATCAAATTATCAAACTAACAGTTGAAAGCTCTGCTCGTGAGTTCTTAGGCAAGGAAAAC 959 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 897 CATCAAATTATCAAACTAACAGTTGAAAGCTCTGCTCGTGAGTTCTTAGGCAAAGAAAAC 956 Query 960 TCAACCACTCTCATGGCGAGTGTGAATTTTATTGATTTGGCGGGGAGCGAGCGTGCATCG 1019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 957 TCAACCACTCTCATGGCGAGTGTGAATTTTATTGATTTGGCGGGGAGCGAGCGTGCATCG 1016 Query 1020 CAGGCCTTATCAGCTGGTGCAAGACTTAAGGAGGGTTGTCATATCAATCGAAGCTTGCTG 1079 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1017 CAGGCCTTATCAGCTGGTGCAAGACTTAAGGAGGGTTGTCATATCAATCGAAGCTTGTTG 1076 Query 1080 ACTCTAGGAACAGTGATACGCAAACTCAGCAACGGAAGACAAGGACACATCAACTATAGA 1139 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1077 ACTCTAGGAACCGTGATACGCAAACTCAGCAACGGAAGACAGGGACACATCAACTATAGA 1136 Query 1140 GACTCCAAACTCACACGCATTCTTCAGCCGTGCTTGGGGGGCAATGCCAGAACCGCCATA 1199 |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 1137 GACTCCAAGCTCACACGCATTCTTCAGCCGTGCTTGGGAGGCAATGCTAGAACCGCCATA 1196 Query 1200 GTCTGCACGCTGAGTCCAGCGAGGAGTCATGTGGAGCAGACTAGAAACACTCTCTTGTTT 1259 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1197 GTTTGCACGCTGAGTCCAGCGAGGAGTCATGTGGAGCAGACTAGAAACACTCTCTTGTTT 1256 Query 1260 GCTTGCTGTGCCAAGGAAGTCACCACGAAAGCACAGATCAATGTTGTTATGTCAGACAAG 1319 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1257 GCTTGCTGTGCCAAGGAAGTCACAACGAAAGCACAGATCAATGTTGTTATGTCAGACAAG 1316 Query 1320 GCTTTGGTGAAGCAACTACAGCGTGAGCTAGCCAGGCTCGAGAGCGAGCTGAGAAACCCA 1379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1317 GCTTTGGTGAAGCAACTACAGCGTGAGCTAGCCAGGCTCGAGAGCGAGCTGAGAAACCCA 1376 Query 1380 GCACCTGCAACCTCAAGCTGCGATTGTGGGGTGACACTGAGAAAGAAAGATCTTCAGATA 1439 || ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 1377 GCCCCTGCAACCTCAAGCTGCGATTGTGGGGTTACGCTGAGAAAGAAAGATCTTCAGATA 1436 Query 1440 CAAAAGATGGAGAAGCAGCTTGCAGAAATGACAAAACAGCGGGATATTGCTCAATCTCGG 1499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1437 CAAAAGATGGAGAAGCAGCTTGCAGAAATGACAAAACAGCGGGATATTGCTCAATCTCGG 1496 Query 1500 CTTGAAGATTTTATGAAGATGGTGGAACACGATGCGTCTTCGAAGGCTGGAACTCCGCAT 1559 ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| Sbjct 1497 CTTGAAGATTTTATGAAGATGGTTGAACACGATGAGTCTTCGAAGGTTGGAACTCCGCAT 1556 Query 1560 TTCCGTAACCGTACCAACAAGTGGGAGGATGGTTCAGTGTCAGAGATATCAGGCGTGGTT 1619 |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1557 TTCCGTAACCGTACCACCAAGTGGGAGGATGGTTCACTGTCAGAGATATCAGGCGTGGTT 1616 Query 1620 GATCCAGACAGGACCAGTTTCATATCAGATGGGACGTCAACGCCTCTGTCGACTGCAAGA 1679 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1617 GATCCAGACAGGACCAGTTTCATATCAGATGGGACCTCAACGCCTCTGTCGACTGCAAGA 1676 Query 1680 GCTCATGTTAGGTCTCACTCTGATGATGATCTGGAGGAGGAAATGTCGCCCAGGCATTCA 1739 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1677 GCTCATGTTAGGTCTCACTCTGATGATGATCTGGAGGAGGAAATGTCGCCTAGGCATTCA 1736 Query 1740 GGAGATCAATCAGAAGAATACTGCAAAGAGGTACAATGCATTGAGATGGAAGAATCGACC 1799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1737 GGAGATCAATCAGAAGAATACTGCAAAGAGGTACAATGCATTGAGATGGAAGAATCGACC 1796 Query 1800 AGAGACATTAATAAC-GACAGTGAAGAAAGGACAGACGCAGAAACACTTTTGGGACACAA 1858 ||||||||||||||| | ||||||||||||||||||||| ||||||||| ||| ||||| Sbjct 1797 AGAGACATTAATAACAG-CAGTGAAGAAAGGACAGACGCCGAAACACTTCAGGGCCACAA 1855 Query 1859 TGCAGAGGCAAACGGTGAAACAGGTAGTGCTCAACACAGGATCCCGTCAAGTGTTAGAAG 1918 ||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 1856 CGCAGAGGCAAATGGTGGAACAGGTATTGCTCAACACAGGATCCCGTCAAGTGTTAGAAG 1915 Query 1919 TGTCAGGAGGAGGAAGAGTTGGAGCCGTGGAGATACCATGACAGGCACAAGCACTCCTCC 1978 ||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| Sbjct 1916 CGTCAGGAGGAGGAAGAGTTGGAGCCGTGGAGATACCATGCCGGGAACAAGCACTCCTCC 1975 Query 1979 TGATGCCCTGGAGACAGACTACCGTGGAAGACCGGAGGGTCATGGAT-TTGCGTTTCCTG 2037 ||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 1976 TGATGCCCTGGAGGCAGACTACCGTGGAAGACCGGAGGGTCATGG-TGTTGCGTTTCCTG 2034 Query 2038 ATTTGGAGTTTGGTTCTGGTGGGAAATTGTTGAGGAACGATTCAATGACTTCTCGTGGAA 2097 |||| ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||| Sbjct 2035 ATTTAGAGTTCAGTTCTGGTGGGAAATTATTGAGGAACGATTCAATGTCTTCTCGCGGAA 2094 Query 2098 GTGATTCAACTGAGGCTCACAGCATTGGAACACCGTTGGTGGGAGAAGAGGGAGGTATCA 2157 ||||||| ||||||||||||||| |||||||||| |||||||||||||| |||||||||| Sbjct 2095 GTGATTCCACTGAGGCTCACAGCGTTGGAACACCATTGGTGGGAGAAGATGGAGGTATCA 2154 Query 2158 CCAGCATACGGTCATTTGTTGAAGGGCTGAAGGAGATGGTTTCGGATCCGGAGAATTCAG 2217 ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2155 CCAGCATCCGATCATTTGTTGAAGGGCTGAAGGAGATGGTTTCGGATCCTGAGAATTCAA 2214 Query 2218 GGAAAATGAGGAA-GGACATTGGTGTGGATGCTATGGAGGAAGAGGTGTCTGGGACAATG 2276 |||||||| |||| ||||||||||||||| |||||||| |||||||| |||||||||||| Sbjct 2215 GGAAAATG-GGAAAGGACATTGGTGTGGACGCTATGGAAGAAGAGGTATCTGGGACAATG 2273 Query 2277 ACAAACTGGTCGGAGGAATTCGAGAGACAGAGAGAACAAATTCTGGGGCTGTGGCAGACA 2336 ||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||||||| Sbjct 2274 ACAAACTGGCCGGAGGAGTTCGAGAGGCAGAGAGAACAAATTTTGGGGCTGTGGCAGACA 2333 Query 2337 TGTCATGTCTCGTTGGTGCATAGAACGTACTTCTTCTTGCTCTTCACGGGAGATCAAGCG 2396 ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2334 TGTCATGTCTCATTGGTGCATAGAACATACTTCTTCTTGCTCTTCACGGGAGATCAAGCA 2393 Query 2397 GATTCGATATACATCGGAGTAGAGCTAAGAAGACTCTCCTTTATGAAAGAAAGTTTCTCT 2456 ||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||| Sbjct 2394 GATTCGATATACATCGGAGTAGAGCTAAGAAAACTCTCCTTTATGAAAGAGAGCTTCTCT 2453 Query 2457 CAAGGAAACCATGCCTTTGAAAGAGGACAGACACTCACAATAGCTTCAAGCCTGAAGGCG 2516 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2454 CAGGGAAACCATGCCTTTGAAAGAGGACAAACACTCACAATAGCTTCAAGCCTGAAGGCG 2513 Query 2517 CTTCATAGGGAGAGACGGATGCTAAGCAAGCTTGTCGGGAAGAGGTTTACTGGAGAGGAA 2576 ||||| ||||||||||| ||||||||||||||||| || |||||||| |||||||||||| Sbjct 2514 CTTCACAGGGAGAGACGAATGCTAAGCAAGCTTGTAGGAAAGAGGTTCACTGGAGAGGAA 2573 Query 2577 AGGAAGAGACTTTACCAGAAGTTTGGGATTGCTGTGAACTCGAAACGTCGGCGGTTGCAG 2636 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| Sbjct 2574 AGGAAGAGACTTTACCAGAAGTTTGGGATCGCTGTAAACTCGAAACGCCGGCGGTTACAG 2633 Query 2637 CTAGCGAACCAGCTCTGGAGTAAACCCAATGACATAACTCATGCGGTTGAAAGCGCAGCC 2696 |||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||| Sbjct 2634 CTAGCGAACCAGCTCTGGAGTAAACCCAATGACATAACCCATGTGGTCGAAAGTGCAGCC 2693 Query 2697 GTTGTAGCGAAA-CTGGTTAGGTTTGTGGAGCAAGGTAGAGCTATGAAGGAGATGTTTGG 2755 || ||||| ||| ||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2694 GTCGTAGC-AAAGCTGGTTAGGTTCGTGGAGCAAGGAAGAGCTATGAAGGAGATGTTTGG 2752 Query 2756 TCTGAGCTTCACGCCTCCGCTACCGACAACGCGGAGATCACTAAACTGGAGGAAAAGCAT 2815 ||||||||||||||||| ||| |||||||| |||||||| || |||||||| |||||||| Sbjct 2753 TCTGAGCTTCACGCCTCTGCTCCCGACAACTCGGAGATCTCTTAACTGGAGAAAAAGCAT 2812 Query 2816 GGCCACACTGTTCTAATTTTAATAGTCAACCACGTTCATATAATG-GT-TTCAAGGTTTG 2873 |||||| || ||||||||||| ||| ||| ||||||||| ||||| || || |||||| | Sbjct 2813 GGCCACGCTTTTCTAATTTTATTAGGCAAACACGTTCATTTAATGAGTGTT-AAGGTT-G 2870 Query 2874 TACGTGTAAATCTTCTAGG 2892 || |||||||||||||||| Sbjct 2871 TATGTGTAAATCTTCTAGG 2889 > Ahg490663 jgi|Araly1|490663|fgenesh2_kg.7__96__AT4G38950.2 Length=2907 Score = 1849 bits (1001), Expect = 0.0 Identities = 2102/2616 (80%), Gaps = 145/2616 (6%) Strand=Plus/Plus Query 266 GCTGAAGAAAATGGAGAAGACACAGGTGCATGTTGCCCGGGAAGAGAAGATATTGGTTCT 325 ||| ||||| |||||||||||||| ||| ||| ||||| ||||||||||| ||||||| Sbjct 210 GCTAAAGAAGATGGAGAAGACACATTTGCCTGTAGCCCGACAAGAGAAGATACTGGTTCT 269 Query 326 GGTGAGACTGAGACCTCTGAACGAGAAAGAGATCT-TGGCTAATGAAGCTGCGGACTGGG 384 ||||||| |||||||||| || ||||||||||| | |||||| ||||||||||| |||| Sbjct 270 GGTGAGATTGAGACCTCTAAATGAGAAAGAGAT-TGCGGCTAACGAAGCTGCGGATTGGG 328 Query 385 AATGCATCAACGACACCACCGTATTGTACAGAAACACGTTGCGTGAGGGCTC-AACTTTT 443 |||| ||||| || |||||| |||||||||||||||| ||||| || ||||| ||| ||| Sbjct 329 AATGTATCAATGATACCACCATATTGTACAGAAACACATTGCGCGAAGGCTCAAAC-TTT 387 Query 444 CCTTCTGCATACTCATTTGATAGAGTGTACCGAGGTGAATG-CCCAACCAGACAAGTTTA 502 ||||||||||| |||||||||| ||| |||||||||||||| ||| |||||||||||||| Sbjct 388 CCTTCTGCATATTCATTTGATAAAGTCTACCGAGGTGAATGTCCC-ACCAGACAAGTTTA 446 Query 503 CGAAGATGGCCCCAAGGAAGTTGCTCTCTCGGTGGTCAAAGGAATTAACTCTAGTATTTT 562 ||| ||||| |||||||| | ||||| ||||| ||||||||||| || | ||||||||| Sbjct 447 CGAGGATGGAACCAAGGAAATCGCTCTGTCGGTTGTCAAAGGAATCAATTGTAGTATTTT 506 Query 563 CGCGTATGGTCAGACGAGCAGTGGAAAGACATACACCATGTCTGGTATAACTGAGTTTGC 622 ||| ||||| |||||||| || |||||||||||||||||| ||||||| ||||||||||| Sbjct 507 CGCATATGGCCAGACGAGTAGCGGAAAGACATACACCATGACTGGTATTACTGAGTTTGC 566 Query 623 TGTGGCTGACATATTTGATTATATATTTAAGCATGAAGATAGGGCATTTGTT-GTGAAAT 681 |||||||||||||||||| ||||||||| |||||||||| ||||||||| | ||||| | Sbjct 567 TGTGGCTGACATATTTGACTATATATTTCAGCATGAAGAAAGGGCATTT-TCAGTGAAGT 625 Query 682 TTTCGGCTATAGAGATCTACAATGAGGCCATCCGCGATCTTCTCAGCCCAGATAGTACAC 741 |||| |||||||||||||||||||||||||| || ||||| || ||| | ||| ||||| Sbjct 626 TTTCAGCTATAGAGATCTACAATGAGGCCATACGAGATCTGCTTAGCTCGGATGGTACAT 685 Query 742 CACTGAGGCTACGAGATGACCCTGAGAAAGGGGCCGCCGTTGAAAAAGCCACAGAGGAAA 801 | ||||||||||||||||| |||||||||||| | | |||||||||||||||||||||| Sbjct 686 CGCTGAGGCTACGAGATGATCCTGAGAAAGGGACAGTTGTTGAAAAAGCCACAGAGGAAA 745 Query 802 CGCTGAGAGATTGGAACCATTTGAAGGAACTT--ATCTCAGTTTGTGAAGCACAGCGGAA 859 | || |||| |||||||| ||||||| ||| |||| | |||||||||||||||| || Sbjct 746 CTTTGCGAGACTGGAACCACCTGAAGGAGCTTCTATCT-A-TTTGTGAAGCACAGCGTAA 803 Query 860 GATTGGTGAAACTTCACTAAATGAGAGAAGTTCAAGATCTCATCAAATTATCAAACTAAC 919 |||||||||||| ||| | |||||||||||||| |||||||||||||| |||| ||| || Sbjct 804 GATTGGTGAAACCTCATTGAATGAGAGAAGTTCCAGATCTCATCAAATGATCAGACTGAC 863 Query 920 AGTTGAAAGCTCTGCTCGTGAGTTCTTAGGCAAGGAAAACTCAACCACTCTCATGGCGAG 979 ||||||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||| Sbjct 864 AGTTGAAAGCTCTGCTCGTGAGTTCCTAGGCAAAGAAAACTCCACCACCCTCATGGCGAG 923 Query 980 TGTGAATTTTATTGATTTGGCGGGGAGCGAGCGTGCATCGCAGGCCTTATCAGCTGGTGC 1039 ||||||||| || ||| | ||||| |||||||||||||| ||||| | ||||||||| | Sbjct 924 TGTGAATTTCATCGATCTAGCGGGAAGCGAGCGTGCATCACAGGCGATGTCAGCTGGTAC 983 Query 1040 AAGACTTAAGGAGGGTTGTCATATCAATCGAAGCTTGCTGACTCTAGGAACAGTGATACG 1099 |||||| ||||| || || ||||||||| |||| ||||||||||| ||||||||||| || Sbjct 984 AAGACTCAAGGAAGGCTGCCATATCAATAGAAGTTTGCTGACTCTTGGAACAGTGATCCG 1043 Query 1100 CAAACTCAGCAACGGAAGACAAGGACACATCAACTATAGAGACTCCAAACTCACACGCAT 1159 ||||| || || ||||||||||| |||||||||| |||||||||||| ||||| || || Sbjct 1044 TAAACTTAGTAAGGGAAGACAAGGGCACATCAACTTTAGAGACTCCAAGCTCACCCGAAT 1103 Query 1160 TCTTCAGCCGTGCTTGGGGGGCAATGCCAGAACCGCCAT-AGTCTGCACGCTGAGTCCAG 1218 ||| ||||| ||||||||||| ||||| ||||| || || | ||||||| ||||| |||| Sbjct 1104 TCTACAGCCATGCTTGGGGGGTAATGCAAGAACAGCTATCA-TCTGCACTCTGAGCCCAG 1162 Query 1219 CGAGGAGTCATGTGGAGC-AGACTA-GAAACACTCTCTTGTTTGCTTGCTGTGCCAAGGA 1276 | ||||||||||| |||| | || | ||| ||||||||||||||| |||||||| ||||| Sbjct 1163 CAAGGAGTCATGTAGAGCTA-ACGAAGAA-CACTCTCTTGTTTGCGTGCTGTGCAAAGGA 1220 Query 1277 AGTCACCACGAAAG-CACAGATCAATGTTGTTATGTCAGACAAGGCTTTGGTGAAGCAAC 1335 ||| ||||| |||| | | |||||||||||||||||||||||||||| || ||||||||| Sbjct 1221 AGTTACCAC-AAAGGCGCGGATCAATGTTGTTATGTCAGACAAGGCTCTGCTGAAGCAAC 1279 Query 1336 TACAGCGTGAGCTAGCCAGGCTCGAGAGCGAGCTGAGAAACCCAGCA-CCTGCAAC--C- 1391 ||||||||||||| || ||||| |||| ||||||||||||||| || ||| || | | Sbjct 1280 TACAGCGTGAGCTTGCGAGGCTTGAGACCGAGCTGAGAAACCCTGCCTCCT-CACCTGCC 1338 Query 1392 TCAAGCTGCGATTGTGGGGTGACACTGAGAAAGAAAGATCTTCAGATACAAAAGATGGAG 1451 |||| ||| ||||||| |||| |||| |||||||||||||| |||||||||||||| Sbjct 1339 TCAAACTGTGATTGTGCAATGACGGTGAGGAAGAAAGATCTTCAAATACAAAAGATGGAA 1398 Query 1452 AAGCAGCTTGCAGAAATGACAAAACAGCGGGATATTGCTCAATCTCGGCTTGAAGATTTT 1511 ||| || | || || ||| ||||||| ||||| |||||||||| |||||||||||||| Sbjct 1399 AAGGAGATCGCTGAGTTGAGAAAACAGAGGGATCTTGCTCAATCCCGGCTTGAAGATTTC 1458 Query 1512 ATGAAGA-TGGTGGAACACGATGCGTCTTCGAAGGCTGGAACTCCGCATTTCCGTAACCG 1570 |||| || || | |||||| ||| | | || ||| ||||||||||||||||| | |||| Sbjct 1459 ATGA-GAATGATTGAACACAATGTGGCGTCAAAGCCTGGAACTCCGCATTTCGGCAACCA 1517 Query 1571 TACCA-ACAAGTGGGAGGATGGTTCAGTGTCAGAGATATCAGGCGTGGTTGATCCAGACA 1629 || | |||||||||| ||||||||||| || |||| ||| |||||||| ||| |||||| Sbjct 1518 CAC-AGACAAGTGGGATGATGGTTCAGTATCGGAGACATCTGGCGTGGTCGATTCAGACA 1576 Query 1630 GGACCAGTTTCATATCAGATGGGACGTCAACGCCTCTGTCGAC-TGCAAGAGCTCATGTT 1688 | | |||| |||||||||||| | | | || || ||||| | | |||||||| ||||| Sbjct 1577 GAAGGAGTTACATATCAGATGGAATGCCTACACCGCTGTCAATAT-CAAGAGCTTATGTT 1635 Query 1689 -AGGTCTCACTCTGA---TGATGATCTGGAGGAGGAAATGTCGCCCAGGCATTCAGGA-G 1743 | ||||||||||| |||||||||||| || || | | ||| |||| ||| ||| | Sbjct 1636 CAT-TCTCACTCTGACGATGATGATCTGGATGAAGAC-T-T-GCCTAGGCGTTC-GGAAG 1690 Query 1744 ATCAATCAGAAGAATACTGCAAAGAGGTACAATGCATTGAGA-TGGAAGAATC-GACCAG 1801 ||| | |||||||||| |||| ||| || ||||||||||||| || | ||||| | | | Sbjct 1691 ATCTACCAGAAGAATATTGCAGAGAAGTTCAATGCATTGAGACTG-AGGAATCAGTC-AC 1748 Query 1802 AGAC-ATTAATAACGACAGTGAAGA-AAG-GA-CAGA-CGCAGAAACAC-TTTTGGGACA 1855 || | || |||||| | || |||| ||| || |||| | | |||| || |||| || | Sbjct 1749 AGTCTAT-AATAAC-A-AGA-AAGACAAGAGAGCAGAAC-CTGAAA-ACGTTTTAGG-C- 1800 Query 1856 CAATGCAGAGGCAAACGGTGAAACAGGTAGTGCTCAACAC-AGGATCCCGTCAAGTGTTA 1914 | || |||| | | | || ||| | ||| | || | || | | | | Sbjct 1801 CG-TGGTGAGG-ATGC--T-AAT--GGT-G-----AAC-CGAG--T---GT-A-G-GCCA 1838 Query 1915 GAAGTGTCAGGAG-GAGGAAGAGTTGGAGCCGTGGAGATACCATGACAGGCACAAGCACT 1973 ||| |||||| | ||| ||| | ||| ||| |||| || || ||||||| |||||| Sbjct 1839 GAAC-GTCAGG-GTGAG-AAGC-T-GGAACCGCAGAGAGACTGTGTCAGGCACGAGCACT 1893 Query 1974 CCTCCTGATGCCCT-GGAGACAGACTACCGT-GGAAGACCGGAGGGTCATG-GATTTGCG 2030 || ||||| ||| || ||||| || || | |||||||| ||| ||||| |||| ||| Sbjct 1894 CCGCCTGAAAACCTAGG-GACAGGCTTCC-TCGGAAGACCAGAGAGTCATAAGATT-GCG 1950 Query 2031 TTTCCTGATTTGGAGTTTGGTTCTGGTGGGAAATTGTTGAGGAACGATTCAATGACTTCT 2090 ||||||||||| ||||| |||||| | | || | ||||| ||||| ||| ||||| Sbjct 1951 TTTCCTGATTTAGAGTTCGGTTCTACT---ATATCG---AGGAATGATTCTATGTCTTCT 2004 Query 2091 CGTGGAAGTGATTCAACTGAGGCTCACAGCATTGGAACACCGTTGGTGGGAGAAGAGGGA 2150 | || |||||||| || | |||||| ||||| |||| ||||| | | |||||||||| Sbjct 2005 TGCGGGAGTGATTCTACAGGGGCTCAGAGCATCAGAACGCCGTTAG-G--AGAAGAGGGA 2061 Query 2151 GGTATCACCAGCATACGGTCATTT-GTTGAAGGGCTGAAGGAGATGGTTTCG-GATCC-G 2207 ||||| || || || ||| | ||| ||||||||||| || ||||||| | | || | Sbjct 2062 GGTATTACTAGTATCCGGAC-TTTCGTTGAAGGGCTTAAAGAGATGGCCAAGCG-TCAAG 2119 Query 2208 GAGAATTCAGGGAAAATGAGGAAGGACATTGGTGTGGATGCTATGGAGGAAGAGGTG-TC 2266 | || || | || || || ||| || || | | |||| ||| | || | Sbjct 2120 GCGAGGTCTCG-AA--TGCCGA-GGA--TTC-TG-GTAAA--ATGG-GGA-G-GGACAT- 2165 Query 2267 TGGGAC-AATGA-CAAACTGGTCGGAGGAATTCGAGAGACAGAGAG-AACAAATTCTGGG 2323 ||| | ||| | | | ||| ||||| |||| ||||||||| | | || | ||||||| Sbjct 2166 TGGT-CTAAT-ATCCA--TGGACGGAG-AATTTGAGAGACAGCG-GCAAGAGATTCTGGA 2219 Query 2324 GCTGTGGCAGACATGTCATGTCTCGTTGGTGCATAGAACGTACTTCTTCTTGCTCTTCAC 2383 | | ||||| || ||| | |||| |||||||||||||| ||||||||||||||||||| Sbjct 2220 GTTATGGCAAACTTGTAACATCTCTTTGGTGCATAGAACATACTTCTTCTTGCTCTTCAA 2279 Query 2384 GGGAGATCAAGCGGATTCGATATACATCGGAGTAGAGCTAAGAAGACTCTCCTTTATGAA 2443 |||||| |||||||||| || |||||||||||||||||||||||||| | |||||||| Sbjct 2280 AGGAGATGAAGCGGATTCAATCTACATCGGAGTAGAGCTAAGAAGACTTTTGTTTATGAA 2339 Query 2444 AGAAAGTTTCTCTCAAGGAAACCATGCCTTTGAAAGAGGACAGACACTCA-CAATAGCTT 2502 ||| || |||||||| |||||||| || || ||| ||||| | || || | || | || | Sbjct 2340 AGATAGCTTCTCTCAGGGAAACCAAGCATTGGAAGGAGGAGAAAC-CTTAACATTGGCCT 2398 Query 2503 CAAGCCTGAAGGCGCTTCATAGGGAGAGACGGATGCTAAGCAAGCTTGTCGGGAAGAGGT 2562 |||||| ||| |||||||||||||||||| |||||| ||||||||||| ||||| |||| Sbjct 2399 CAAGCCGGAAAGCGCTTCATAGGGAGAGAAAGATGCTGAGCAAGCTTGTGGGGAAAAGGT 2458 Query 2563 TTACTGGAGAGGAAAGGAAGAGACTTTACCAGAAGTTTGGGATTGCTGTGAACTCGAAAC 2622 || | | ||| || ||||| ||| | || || |||||||||||||| || ||||| |||| Sbjct 2459 TTTCAGAAGAAGAGAGGAAAAGAATCTATCACAAGTTTGGGATTGCGGTTAACTCCAAAC 2518 Query 2623 GTC-GGCGGTTGCAGCTAGCGAACCAGCTCTGGAGTAAACCCAATGACATAACTCATGCG 2681 | | |||| || || || | |||| |||||||||| || ||||| |||| ||||| | Sbjct 2519 G-CAGGCGATTACAACTTGTGAACGAGCTCTGGAGCAATCCCAAGGACACGACTCAGGTT 2577 Query 2682 GTTGAAAGCGCAGCCGTTGTAGCGAAACTGGTTAGGTTTG-TGGAGCAAGGTAGAGCTAT 2740 || |||||||||| ||||||||||| || || ||||| | || ||||||| ||||| || Sbjct 2578 GTGGAAAGCGCAGATGTTGTAGCGAAGCTCGTGAGGTTCGCTG-AGCAAGGCAGAGCCAT 2636 Query 2741 GAAGGAGATGTTTGGTCTGAGCTTCACGCCTCCG-C-TACC-GACAACGCGGAGATCACT 2797 |||||||||||||||||||| |||||| ||||| | | | ||| || |||||||| | Sbjct 2637 GAAGGAGATGTTTGGTCTGACCTTCACACCTCCTTCATTCTTGACTACTCGGAGATCGC- 2695 Query 2798 AAACT-GGAGGAAAAGCATGGCC-ACACTGTTCTAA 2831 | | | |||| ||||||||| || ||||| |||||| Sbjct 2696 ATAGTTGGAGAAAAAGCATG-CCTACACTTTTCTAA 2730 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 113623200835 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5