BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G22990.3 Length=1635 Score E Sequences producing significant alignments: (Bits) Value Ahg481168 jgi|Araly1|481168|fgenesh2_kg.4__228__AT2G22990.1 2183 0.0 Ahg932271 jgi|Araly1|932271|scaffold_400259.1 1408 0.0 Ahg481172 jgi|Araly1|481172|fgenesh2_kg.4__232__AT2G23010.2 1277 0.0 Ahg481161 jgi|Araly1|481161|fgenesh2_kg.4__221__AT2G22970.3 1103 0.0 Ahg481165 jgi|Araly1|481165|fgenesh2_kg.4__225__AT2G22980.2 909 0.0 Ahg932268 jgi|Araly1|932268|scaffold_400256.1 414 8e-115 > Ahg481168 jgi|Araly1|481168|fgenesh2_kg.4__228__AT2G22990.1 Length=1503 Score = 2183 bits (1182), Expect = 0.0 Identities = 1404/1505 (93%), Gaps = 39/1505 (3%) Strand=Plus/Plus Query 8 TTATCATTATTTTATAAAGATCCTATGTCTATCCGTAAATGGACTAATCTTTAGACACAC 67 |||||||||||||||||||||||||||||| ||| |||| ||| |||||||||| || | Sbjct 2 TTATCATTATTTTATAAAGATCCTATGTCTTTCCCTAAACGGAGTAATCTTTAGCCAAAG 61 Query 68 AG-----AGAATATAATGAGTTTGAAAATAAAGTTTCTGCTTCTGCTTGT-CTTG---T- 117 || ||||||||||||| ||||||||||||||||||||||||||| | |||| | Sbjct 62 AGAATTCAGAATATAATGAGATTGAAAATAAAGTTTCTGCTTCTGCTTCTACTTGTCTTA 121 Query 118 A-TCATCATGTTGATTCTGCCTCTATCGTCAAGTTTCTTCCTGGTTTTGAAGGCCCTCTT 176 | |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 122 AGTCATCATGTTGATTGTGCCTCTATTGTCAAGTTTCTTCCTGGTTTTGAAGGCCCTCTT 181 Query 177 CCTTTCGAACTTGAAACCGGGTACATTGGTATTGGTGAGGACGAGAATGTGCAATTTTTC 236 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 182 CCTTTCGAACTTGAAACCGGGTACGTTGGTATTGGTGAGGACGAGAATGTGCAATTTTTC 241 Query 237 TACTATTTCATCAAATCTGAAAACAATCCAAAAGAAGATCCTCTTCTTATATGGTTAAAT 296 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 242 TACTATTTCATCAAATCTGAGAACAATCCAAAAGAAGATCCTCTTCTTATATGGTTAAAT 301 Query 297 GGAGGACCTGGATGTTCTTGTCTTGGTGGTATTATTTTTGAGAACGGACCGGTGGGTTTG 356 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 302 GGAGGACCTGGATGTTCTTGTCTCGGTGGTATTCTTTTTGAGAACGGACCGGTGGGTTTG 361 Query 357 AAGTTTGAGGTGTTCAACGGAAGTGCTCCTTCTTTGTTCTCTACTACATATTCATGGACA 416 ||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 362 AAGTTCGAGGTGTACAATGGAAGTGCTCCTTCTTTGTTCTCTACTACATATTCATGGACA 421 Query 417 AAGATGGCAAACATTATATTCTTGGATCAGCCAGTAGGATCTGGCTTCTCCTACTCAAAA 476 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 422 AAGATGGCAAACATAATATTCTTGGATCAGCCAGTAGGATCTGGCTTCTCCTACTCAAAA 481 Query 477 ACTCCAATTGATAAAACTGGTGACATAAGTGAAGTAAAGAGGACCCATGAGTTTCTTCAA 536 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 482 ACTCCAATTGATAAAACTGGTGATATAAGTGAAGTAAAGAGGACCCATGAATTTCTTCAA 541 Query 537 AAGTGGCTAAGCAGGCATCCACAATATTTC-TCCAACCCTTTATATGTAGTTGGAGATTC 595 ||||||||||| | |||||||||||||||| | ||||||||| ||||| || |||||||| Sbjct 542 AAGTGGCTAAGAATGCATCCACAATATTTCAT-CAACCCTTTTTATGTTGTCGGAGATTC 600 Query 596 TTATTCCGGTATGATTGTCCCGGCCCTCGTTCAAGAAATCTCACAAGGAAATTATATATG 655 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 601 TTATTCCGGTATGATTGTCCCGGCCCTCGTTCAAGAAATCTCACAAGGAAACTATATATG 660 Query 656 TTGCGAACCTCCTATAAATCTACAGGGTTATATGCTTGGAAACCCTGTAACATATATGGA 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TTGCGAACCTCCTATAAATCTACAGGGTTATATGCTTGGAAACCCTGTAACATATATGGA 720 Query 716 CTTTGAACAAAACTTCCGCATTCCATATGCTTATGGTATGGGATTAATCTCCGACGAAAT 775 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || Sbjct 721 CTTTGAACAAAACTTCCGCATTCCATATGCTTATGGCATGGGTTTAATCTCCGATGAGAT 780 Query 776 CTATGAGCCAATGAAGAGAATCTGCAACGGAAATTATTACAATGTGGATCCATCTAACAC 835 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 781 CTATGAGCCAATGAAGAGAAGCTGCAACGGAAATTATTACAATGTGGATCCATCTAACAC 840 Query 836 ACAATGTTTGAAACTTACTGAAGAATATCATAAGTGCACTGCCAAAATAAATATCCATCA 895 | ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 841 AAAATGTTTGAAACTTACTGAAGAATACCATAAGTGCACTGACAAAATAAATATCCATCA 900 Query 896 CATATTAACACCAGATTGCGATGTAACCAATGTAACATCTCCTGATTGTTATTATTATCC 955 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 901 TATATTAACACCAGATTGCGATGTAACCAATGTAACATCTCCTGATTGTTATTACTATCC 960 Query 956 ATATCATCTCATTGAATGTTGGGCTAACGACGAGAGCGTTCGCGAAGCTCTTCATATTGA 1015 ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| | Sbjct 961 GTATCATCTCATTGAATGTTGGGCCAACGATGAGAGCGTTCGTGAAGCTCTTCATATTAA 1020 Query 1016 AAAGGGTAGTAAAGGAAAATGGGCGCGATGTAATCGGACTATTCCATACAATCACGACAT 1075 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 AAAGGGGAGTAAAGGAAAATGGGCGCGATGTAATCGGACTATTCCATACAATCACGACAT 1080 Query 1076 TGTAAGCAGCATACCATATCACATGAATAACAGCATCAGTGGATACCGATCTCTTATTTA 1135 | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1081 CGAAAGCAGCATACCATATCACATGAATAACAGCATCAGAGGATACCGATCTCTTATTTA 1140 Query 1136 CAGTGGTGATCACGACATCGCGGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCT 1195 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 TAGTGGTGATCATGACATTGCGGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCT 1200 Query 1196 CAATTACTCCCCCATTCATAACTGGAGGCCATGGATGATAAACAATCAAATCGCTGGATA 1255 |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct 1201 CAATTACTCCCCCATTCATAACTGGAGGCCTTGGATGATAAATAATCAAATTGCTGGATA 1260 Query 1256 CACGAGAGCTTATTCCAATAAGATGACATTTGCTACTATCAAAGCAAGTGTGGACACACG 1315 |||||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||| Sbjct 1261 CACGAGAGCTTACTCCAATAAGATGACATTTGCTACTATCAAAGGA-G-GTGGACACACG 1318 Query 1316 GCAGAGTATAGACCAAACGAGACCTTTATCATGTTCCAAAGGTGGATCAGTGGCCAACCC 1375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1319 GCAGAGTATAGACCAAACGAGACCTTTATCATGTTCCAAAGGTGGATCAGTGGCCAACTT 1378 Query 1376 CTGTAACAAAAGGCTTATGACCTTCACCTATAATTATCTACCAACTAATATCCACGTTAA 1435 |||||| |||| |||| | | ||| | | | | | || |||||||||||| Sbjct 1379 CTGTAATAAAAA--TTAT--C-T--ACC-A-AGT-A---A-----TA-TATCCACGTTAA 1419 Query 1436 GCGCAgttgtttgt-gttgaaatgtttttgttgtttgctttgttgcattcttttgtgctt 1494 ||||||||||||| || ||||||||||||||||||| ||||||||||| |||| | || Sbjct 1420 CCGCAGTTGTTTGTTGT-GAAATGTTTTTGTTGTTTGATTTGTTGCATT-TTTTAT--TT 1475 Query 1495 tatgt 1499 ||||| Sbjct 1476 TATGT 1480 > Ahg932271 jgi|Araly1|932271|scaffold_400259.1 Length=1354 Score = 1408 bits (762), Expect = 0.0 Identities = 1135/1314 (86%), Gaps = 30/1314 (2%) Strand=Plus/Plus Query 95 GTTTCTGCTTCTGCTTGTCTTGTA-TCATCATGTTGATTCTGCCTCTATCGTCAAGTTTC 153 |||||||||||||||||||||| | ||||||||||||||||||| ||| ||||||| || Sbjct 44 GTTTCTGCTTCTGCTTGTCTTG-AGTCATCATGTTGATTCTGCCAATATAGTCAAGTCTC 102 Query 154 TTCCTGGTTTTGAAGGCCCTCTTCCTTTCGAACTTGAAACCGGGTACATTGGTATTGGTG 213 |||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||| | Sbjct 103 TTCCTGGTTTGGAAGGCAATCTTCCTTTCGAACTCGAAACCGGGTACATCGGTATTGGAG 162 Query 214 AGGACGAGAATGTGCAATTTTTCTACTATTTCATCAAATCTGAAAACAATCCAAAAGAAG 273 |||||||| | | |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 163 AGGACGAGGACATCCAATTTTTCTACTACTTCATCAAATCTGAAAACAATCCAAAAGAAG 222 Query 274 ATCCTCTTCTTATATGGTTAAATGGAGGACCTGGATGTTCTTGTCTTGGTGGTATTATTT 333 | ||||||||| |||||||| ||||||||||||||||||||| ||| ||||| || ||| Sbjct 223 ACCCTCTTCTTCTATGGTTAGATGGAGGACCTGGATGTTCTTCTCTCGGTGGCCTTCTTT 282 Query 334 TTGAGAACGGACCGGTGGGTTTGAAGTTTGAGGTGTTCAACGGAAGTGCTCCTTCTTTGT 393 ||||||| |||||||||| |||||||| | ||| | ||| |||||| | |||||||||| Sbjct 283 TTGAGAATGGACCGGTGGCTTTGAAGTCCGCGGTCTACAATGGAAGTACCCCTTCTTTGT 342 Query 394 TCTCTACTACATATTCATGGACAAAGATGGCAAACATTATATTCTTGGATCAGCCAGTAG 453 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| || | Sbjct 343 TCTCTACTACATATTCATGGACAAAGATGGCAAACATAATATACTTGGATCAGCCTGTTG 402 Query 454 GATCTGGCTTCTCCTACTCAAAAACTCCAATTGATAAAACTGGTGACATAAGTGAAGTAA 513 ||||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||| | Sbjct 403 GATCTGGCTTCTCCTACTCAAGAACTCCAATTGAAAAAACTAGTGACACAAGTGAAGTTA 462 Query 514 AGAGGACCCATGAGTTTCTTCAAAAGTGGCTAAGCAGGCATCCACAATATTTCTCCAACC 573 |||||| |||||||||||||||||||||||| |||| |||||||| | ||||||||||| Sbjct 463 AGAGGATCCATGAGTTTCTTCAAAAGTGGCTTAGCAAACATCCACAGTTTTTCTCCAACC 522 Query 574 CTTTATATGT-A-GTTGGAGATTCTTATTCCGGTATGATTGTCCCGGCCCTCGTTCAAGA 631 |||| || || | | |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 523 CTTTTTACGTCACG--GGAGATTCTTATTCCGGTATGATTGTTCCGGCACTCGTTCAAGA 580 Query 632 AATCTCACAAGGAAATTATATATGTTGCGAACCTCCTATAAATCTACAGGGTTATATGCT 691 |||||| |||||||||||||||||||| |||||| |||||||||||||||||| |||| Sbjct 581 GATCTCAAAAGGAAATTATATATGTTGCAAACCTCTTATAAATCTACAGGGTTACGTGCT 640 Query 692 TGGAAACCCTG-TAACATATA-TGGACTTTGAACAAAACT-TCCGCATTCCATATGCTTA 748 |||||||| | |||||||| || || ||| |||||| || | ||||| | |||| | Sbjct 641 CGGAAACCC-GATAACATATGCTGAACAC-GAAAAAAACTATC-GTATTCCGTTTGCTCA 697 Query 749 TGGTATGGGATTAATCTCCGACGAAATCTATGAGCCAATGAAGAGAATCTGCAACGGAAA 808 ||| ||| ||||||||| || ||| |||| || || ||||||||| |||||| ||||| Sbjct 698 TGGAATGTCATTAATCTCTGATGAACTCTACGAATCATTGAAGAGAACCTGCAAAGGAAA 757 Query 809 TTATTACAATGTGGATCCATCTAACACACAA-TGTTTGAAACTTACTGAAGAATATCATA 867 |||| | |||||||||||| ||||||| || |||||||||||| ||||||||| |||| Sbjct 758 TTATGAAAATGTGGATCCAAGTAACACA-AAGTGTTTGAAACTTGTTGAAGAATACCATA 816 Query 868 AGTGCACTGCCAAAATAAATATC-CATCACATATTAACACCAGATTGCGATGTAAC---- 922 ||||||||| ||||||||||| | || || ||||||| ||||||||||||| || Sbjct 817 AGTGCACTGACAAAATAAATA-CACAACATATATTAATACCAGATTGCGATAAAAAAGGG 875 Query 923 CAATG---TAACATCTCCTGATTGTTATTATTATCCATATCATCTCATTGAATGTTGGGC 979 || || |||| |||||||||| |||||||||| ||| |||||||||||||||||| Sbjct 876 CA-TGGAATAACCCCTCCTGATTGCTATTATTATCTGTATTTTCTCATTGAATGTTGGGC 934 Query 980 TAACGACGAGAGCGTTCGCGAAGCTCTTCATATTGAAAAGGGTAGTAAAGGAAAATGGGC 1039 ||| ||||| | ||||| |||||||||||| || ||||||| | ||||||| ||||| | Sbjct 935 CAACAACGAGGGAGTTCGTGAAGCTCTTCATGTTAAAAAGGGAACTAAAGGACAATGG-C 993 Query 1040 -GCGATGTAATCGGACTATTCCATACAATCACGACATTGTAAGCAGCATACCATATCACA 1098 |||||||||| |||| ||| ||||| || || ||||| |||||||| |||| ||||| | Sbjct 994 AGCGATGTAATTGGACAATTTCATACGATAACAACATTATAAGCAGCGTACCCTATCATA 1053 Query 1099 TGAATAACAGCATCAGTGGATACCGATCTCTTATTTACAGTGGTGATCACGACATCGCGG 1158 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | Sbjct 1054 TGAATAACAGCATCAGTGGATACCGATCTCTTATTTATAGTGGTGATCATGACATCACAA 1113 Query 1159 TCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTACTCCCCCATTCATAACT 1218 | ||||| | ||||||||||| ||||||| |||||| ||||||||| ||||||| ||| Sbjct 1114 TGCCTTTCCAAGCAACTCAAGCATGGATAAAATCTCTAAATTACTCCATCATTCATGACT 1173 Query 1219 GGAGGCCATGGATGATAAACAATCAAATCGCTGGATACACGAGAGCTTATTCCAATAAGA 1278 ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 1174 GGAGGCCTTGGATGATAAAGGATCAAATCGCTGGATACACGAGAACTTATTCCAATAAGA 1233 Query 1279 TGACATTTGCTACTATCAAAGCAAGTGTGGACACACGGCAGAGTATAGACCAAACGAGAC 1338 ||||||||||||||||||||| | | |||||||||| ||||| ||| |||||||||||| Sbjct 1234 TGACATTTGCTACTATCAAAGGA-G-GTGGACACACTGCAGAATATCTACCAAACGAGAC 1291 Query 1339 CTTTATCATGTTCCAAAGGTGGATCAGTGGCCAACCCCTGTAACAA-A-AGGCT 1390 |||||| ||||||||||||||||||||||||||||| ||||| || | ||||| Sbjct 1292 CTTTATAATGTTCCAAAGGTGGATCAGTGGCCAACCTTTGTAATAATAGAGGCT 1345 > Ahg481172 jgi|Araly1|481172|fgenesh2_kg.4__232__AT2G23010.2 Length=1376 Score = 1277 bits (691), Expect = 0.0 Identities = 1118/1318 (85%), Gaps = 53/1318 (4%) Strand=Plus/Plus Query 94 AGTTTCTGCTTCTGCTTGT-CTTGT-ATCA-TCATGTTGATTCT-G--C--C-TCTATCG 144 ||||||||||||| ||| | ||||| | | ||||||||||||| | | | ||||||| Sbjct 5 AGTTTCTGCTTCTTCTTCTACTTGTCTTGAGTCATGTTGATTCTGGTTCTACTTCTATCG 64 Query 145 TCAAGTTTCTTCCTGGTTTTGAAGGCCCTCTTCCTTTCGAACTTGAAACCGGGTACATTG 204 ||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||| Sbjct 65 TCAAGTTTCTTCCTGGTTTTGAAGGTCCTCTTCCTTTCGAGCTCGAAACCGGGTACATTG 124 Query 205 GTATTGGTGAGGACGAGAATGTGCAATTTTTCTACTATTTCATCAAATCTGAAAACAATC 264 |||||||||| || |||||||||||||||||||||||||||||||||||||| || || | Sbjct 125 GTATTGGTGAAGATGAGAATGTGCAATTTTTCTACTATTTCATCAAATCTGAGAAGAA-C 183 Query 265 C-AAAAGAAGATCCTCTTCTTATATGGTTAAATGGAGGACCTGGATGTTCTTGTCTTGGT 323 | |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 184 CTGGAAGAAGATCCTCTTCTTATATGGTTAAATGGAGGACCTGGATGTTCTTGTCTCAGT 243 Query 324 GGTATTATTTTTGAGAACGGACCGGTGGGTTTGAAGTTTGAGGTGTT-CAACGGAAGTGC 382 || || |||||||||||||||| ||| ||||||| ||||| || ||| || | || Sbjct 244 GGCCTTTTTTTTGAGAACGGACCTTTGGCTTTGAAGAACGAGGT-TTACAATGGCACTG- 301 Query 383 TCC-TTCTTTGTTCTCTACTACATATTCATGGACAAAGATGGCAAACATTATATTCTTGG 441 ||| ||||||| | ||||||||||||||||||||||||| ||||||||| |||| ||||| Sbjct 302 TCCCTTCTTTGGTATCTACTACATATTCATGGACAAAGACGGCAAACATAATATACTTGG 361 Query 442 ATCAGCCAGTAGGATCTGGCTTCTCCTACTCAAAAACTCCAATTGATAAAACTGGTGACA 501 ||||||| || |||||||||||||| ||||||| || ||||||||| |||||| |||||| Sbjct 362 ATCAGCCTGTTGGATCTGGCTTCTCTTACTCAAGAATTCCAATTGAAAAAACTAGTGACA 421 Query 502 TAAGTGAAGTAAAGAGGACCCATGAGTTTCTTCAAAAGTGGCTAAGCAGGCATCCACAAT 561 ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | Sbjct 422 CAAGTGAAGTTAAGAGGATCCATGAGTTTCTTCAAAAGTGGCTAAGCAAGCATCCACAGT 481 Query 562 ATTTCTCCAACCCTTTATATGTAGTTGGAGATTCTTATTCCGGTATGATTGTCCCGGCCC 621 ||||||||||||||| || || || |||||||||||||| || |||||||| ||||||| Sbjct 482 TTTTCTCCAACCCTTTTTACGTTGTAGGAGATTCTTATTCGGGCATGATTGTTCCGGCCC 541 Query 622 TCGTTCAAGAAATCTCACAA-GGAAATTATATATGTTGCGAACC-TCCTATAAATCTACA 679 ||||||||||||||||| || || ||||||||||||||| |||| ||||||||||||||| Sbjct 542 TCGTTCAAGAAATCTCA-AATGGGAATTATATATGTTGC-AACCCTCCTATAAATCTACA 599 Query 680 GGGTTATATGCTTGGAAACCCTG-TAACATATATGGACTTTGAACAAAACTTCCGCATTC 738 ||||||| |||| || || || | ||||| |||| || |||||||||||||| ||||||| Sbjct 600 GGGTTATGTGCTCGGCAATCC-GATAACACATATTGAATTTGAACAAAACTTTCGCATTC 658 Query 739 CATATGCTTATGGTATGGGATTAATCTCCGACGAAATCTATGAGCCAATGAAGAGAATCT 798 |||||||| |||| ||| ||||||||| || ||| |||| || ||||||||||||||| Sbjct 659 CATATGCTCATGGAATGTCATTAATCTCTGATGAACTCTACAAGTCAATGAAGAGAATCT 718 Query 799 GCAACGGAAATTATTACAATGTGGATCCATC-TAACACACAATGTTTGAAACTTACTGAA 857 |||| |||||||||| ||||||||||||| | ||||||| |||||||||| ||| |||| Sbjct 719 GCAAGGGAAATTATTTCAATGTGGATCCA-CGTAACACAGAATGTTTGAAGCTTGTTGAA 777 Query 858 GAATATCATAAGTGCACTGCCAAAATAAATATCCATCACATATTAACACCAGATTGCGAT 917 ||||| |||| ||| |||| ||||||||||| |||||| | ||||| | ||| ||| ||| Sbjct 778 GAATACCATATGTGTACTGACAAAATAAATAGCCATCATACATTAATAGCAGGTTGTGAT 837 Query 918 G--T-AA-C-CAATGTA-ACATCTCCTGATTGTTATTATTATCCATATCATCTCATTGAA 971 | | || | |||| | | |||||||||||| ||||||||||| ||||||||| ||||| Sbjct 838 GACTCAAACACAATCCACATATCTCCTGATTGCTATTATTATCCGTATCATCTCGTTGAA 897 Query 972 TGTTGGGCTAACGAC-GAGAGCGTTCGCGAAGCTCTTCATATTGAA-AAGG-GTAGTAAA 1028 |||||||| || || || ||||||||| ||||||||||| || | || | | || | | Sbjct 898 TGTTGGGCCAAT-ACCGATAGCGTTCGCAAAGCTCTTCATGTT-ATTAATGCG-AGCATA 954 Query 1029 GGAAAATGGGCGCGATG-TAATCG-GACTATTCCATACAATCACGACATTGTAAGCAGCA 1086 ||| ||||| ||| | |||||| | |||||||||||||| ||||||| | ||| || Sbjct 955 GGAGAATGGATACGA-GATAATCGTGG-TATTCCATACAATCGCGACATTATGAGCGGCG 1012 Query 1087 TACCATATCACATGAATAACAGCATCAGTGGATACCGATCTCTTAT-TTACAGTGGTGAT 1145 ||||||| || |||||||||||||||| ||| || |||||||| || || |||||||||| Sbjct 1013 TACCATACCATATGAATAACAGCATCAATGGTTATCGATCTCTCATCTT-CAGTGGTGAT 1071 Query 1146 CACGACATCGCGGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTACTCC 1205 || | |||| | | ||||| | |||||||| |||||||||| |||||| ||||||||| Sbjct 1072 CATGGCATCACAATGCCTTTCCAAGCAACTCAGGCCTGGATAAAATCTCTAAATTACTCC 1131 Query 1206 CCCATTCATAACTGGAGGCCATGGATGATAAACA-ATCAAATCGCTGGATACACGAGAGC 1264 || | || |||||||||| ||||||||||| | ||||||||||||||||||||||| | Sbjct 1132 ATCACTGATGACTGGAGGCCTTGGATGATAAA-AGATCAAATCGCTGGATACACGAGAAC 1190 Query 1265 TTATTCCAATAAGATGACATTTGCTACTATCAAAGCAAGTGTGGACACACGGCAGAGTAT 1324 || |||||||||||||||||||||||| | | | | |||||||||||||||||||| Sbjct 1191 TTTTTCCAATAAGATGACATTTGCTAC-AG----G-A-G-GTGGACACACGGCAGAGTAT 1242 Query 1325 AGACCAAACGAGACCTT-TATCATGTTCCAAAGGTGGATCAGTGGCCAACCCCTGTAA 1381 ||||||||||| || ||||||||||||||||||| |||||||||| || ||||| Sbjct 1243 CTACCAAACGAGAG-TTCTATCATGTTCCAAAGGTGGCTCAGTGGCCAGCCTTTGTAA 1299 > Ahg481161 jgi|Araly1|481161|fgenesh2_kg.4__221__AT2G22970.3 Length=1574 Score = 1103 bits (597), Expect = 0.0 Identities = 1086/1312 (83%), Gaps = 74/1312 (6%) Strand=Plus/Plus Query 97 TTCTGCTTCTGCTTGTCTTGTATCATCATGTTGATTCTGCCTCTATCGTCAAGTTTCTTC 156 ||||||||||| || ||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 48 TTCTGCTTCTGTTTATCTTGAATCATCATGTTGATTCTGGCTCTATCGTCAAGTTTCTTC 107 Query 157 CTGGTTTTGAAGGCCCTCTTCCTTTCGAACTTGAAACCGGGTACATTGGTATTGGTGAGG 216 | || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 108 CCGGCTTTGAAGGCCCTCTTCCTTTCGAACTCGAAACCGGGTACATTGGTATTGGTGAGG 167 Query 217 ACGAG-AATGTGCAATT-TTTCTACTATTTCATCAAATCTGAAAACAATCCAAAAGAAGA 274 | ||| ||| ||| || ||| |||||||||||||||||||| ||||||||||||||||| Sbjct 168 AAGAGGAATC-GCAGTTGTTT-TACTATTTCATCAAATCTGAGAACAATCCAAAAGAAGA 225 Query 275 TCCTCTTCTTATATGGTTAAATGGAGGACCTGGATGTTCTTGTCTTGGTGGTATTATTTT 334 ||||||||| | |||||||||||||||||||||||||||| | | ||| || |||| Sbjct 226 CCCTCTTCTTCTCTGGTTAAATGGAGGACCTGGATGTTCTTCTATCACTGGCCTT-TTTT 284 Query 335 T-GAGAACGGACCGGTGGGTTTGAAGTTTGAGGTGTT-CAACGGAAGTGCTCC-TTCTTT 391 | ||||| ||||| ||| ||||||||| ||||| || ||| ||||||| ||| |||||| Sbjct 285 TCGAGAATGGACCTCTGGCTTTGAAGTTAGAGGT-TTACAATGGAAGTG-TCCCTTCTTT 342 Query 392 GTTCTCTACTACATATTCATGGACAAAGATGGCAAACATTATATTCTTGGATCAGCCAGT 451 | |||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||| || Sbjct 343 GGTCTCTACTACATATTCGTGGACAAAGATGGCGAACATAATATTTTTGGATCAGCCTGT 402 Query 452 AGGATCTGGCTTCTCCTACTCAAAAACTCCA---ATTGATAAAACTGGTGACATAAGTGA 508 ||| |||||||||||||||||| ||| ||| |||||||| || |||||| ||| || Sbjct 403 TGGAACTGGCTTCTCCTACTCAAGAACCCCACTTATTGATAAGCCTAGTGACACAAGAGA 462 Query 509 AGTAAAGAGGACCCATGAGTTTCTTCAAAAGTGGCTAAGCAGGCATCCACAATATTTCT- 567 ||| ||||||| || |||||||||||||||||||||||||| |||||||| | ||||| Sbjct 463 AGTTAAGAGGATCCGTGAGTTTCTTCAAAAGTGGCTAAGCAATCATCCACAGT-TTTCTT 521 Query 568 CCAACCCTTTATATG-TAGTTGGAGATTCTTATTCCGGTATGATTGTCCCGGCCCTCGTT 626 |||||||||| |||| ||| |||||||||||||||||||||||||| || ||||||||| Sbjct 522 CCAACCCTTTTTATGCTAGC-GGAGATTCTTATTCCGGTATGATTGTTCCAGCCCTCGTT 580 Query 627 CAAGAAATCTC-ACAAGGAAATTATATATGTTGCGAACC-TCCTATAAATCTACAGGGTT 684 ||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 581 CAAGAAATCTCTA-AAGGAAATTATATATGTTGC-AACCCTCCTATAAATCTACAGGGTT 638 Query 685 ATATGCTTGGAAACCCTG-TAACATATATGGACTTTGAACAAAACT-TCCGCATTCCATA 742 |||| || || ||||| | ||||| || | || || | ||||| || || |||||| Sbjct 639 ATATACTCGGGAACCC-GATAACAAATTTTGAAGAAGACCGAAACTATC-GCGTTCCATT 696 Query 743 TGCTTATGGTATGGGATTAATCTCCGACGAAATCTATGAGCCAATGAAGAGAATCTGCAA 802 | || |||| |||| | |||| || || ||| | || ||| |||| | |||| |||||| Sbjct 697 TTCTCATGGAATGGCACTAATTTCAGATGAACTATACGAGTCAATTAGGAGAGCCTGCAA 756 Query 803 CGGAAATTATTACAATGTGGATCCATC-TAACACACAATGTTTGAAACTTACTGAAGAAT 861 ||||||||||| ||||||||||| | | ||||||| |||||||||||||| |||||||| Sbjct 757 CGGAAATTATTTCAATGTGGATCAA-CGTAACACAAAATGTTTGAAACTTGTTGAAGAAT 815 Query 862 ATCATAAGTGCACTGCCAAAATAAATATCCAT-CACATAT--TAACACCAGATTGCGATG 918 | |||||||| || | |||| |||||| || | ||||| || ||||||||||||| Sbjct 816 ACCATAAGTGTACCGACAAACTAAATAG--ATTC-CATATACTATCACCAGATTGCGA-- 870 Query 919 TAACCAATGTAACATCTCCTGATTG-TTATTATTATCCATATCATCTCATT-GAATGTTG 976 | | | ||||||||||||||| || |||| | |||||| ||||| || | | || Sbjct 871 ---C-A-T--AACATCTCCTGATTGCTTTTTAT-ACCCATATTATCTCCTTAGC-TACTG 921 Query 977 GGCTAACGACGAGAGCGTTCGCGAA-GCTCTTCATATTGAA-AAG-GGTAGTAAAGGAAA 1033 ||| |||||||||||||||||| || ||||||||| || || ||| || |||| |||| | Sbjct 922 GGCCAACGACGAGAGCGTTCGC-AATGCTCTTCATGTT-AATAAGTGG-AGTATAGGAGA 978 Query 1034 ATGGGCGCGATGTAATCGGACTATTCCATACAATCACG-ACATTGTA-AGCAGCATACCA 1091 ||||| |||||||||| ||| || |||||||| || | |||| | |||||| ||||| Sbjct 979 ATGGGTGCGATGTAATAGGAGTAAACCATACAA-CAAGGACATCA-AGAGCAGCGTACCA 1036 Query 1092 TATCACATGAATAACAGCATCAGTGGATACCGATCTCTTATTTACAGTGGTGATCACGAC 1151 || || ||||||||||| || | ||| ||||||||||| || |||||||||||||| || Sbjct 1037 TACCATATGAATAACAGTATTAATGGTTACCGATCTCTCATCTACAGTGGTGATCATGAT 1096 Query 1152 ATCGCGGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTACTCCCCCATT 1211 | | ||| ||||| | ||||||||||| ||||||| |||||| ||||||||| |||| Sbjct 1097 TTGGTGGTTCCTTTCCAAGCAACTCAAGCATGGATAAAATCTCTAAATTACTCCATCATT 1156 Query 1212 CAT-AACTGGAGGCCATGGATGAT-AAACAATCAAATCGCTGGATACACGAGAGCTTATT 1269 ||| || ||||| || |||||||| ||| | |||||||||||||||||| ||| |||||| Sbjct 1157 CATGAA-TGGAGACCTTGGATGATTAAAGA-TCAAATCGCTGGATACACAAGAACTTATT 1214 Query 1270 CCAATAAGATGACATTTGCTACTATCAAAGCAAGTGTGGACACACGGCAGAGTATAGACC 1329 ||||||||||||| ||||||||| ||||||||| | | | | | | || | ||| Sbjct 1215 CCAATAAGATGACTTTTGCTACTGTCAAAGCAA-TA-G-A-----G--A-A-TA-A-ACC 1260 Query 1330 AAACGAGACCTTTATCATGTTCCAAAGGTGGATCAGTGGCCAACCCCTGTAA 1381 ||| |||| ||||||||||| ||||||||||| | ||||||||| ||||| Sbjct 1261 AAATGAGAGTTTTATCATGTTTCAAAGGTGGATTAATGGCCAACCTTTGTAA 1312 > Ahg481165 jgi|Araly1|481165|fgenesh2_kg.4__225__AT2G22980.2 Length=1378 Score = 909 bits (492), Expect = 0.0 Identities = 996/1228 (81%), Gaps = 80/1228 (7%) Strand=Plus/Plus Query 108 CTTGTCTTGTA-TCATCATGTTGATTCTGCCTCTATCGTCAAGTTTCTTCCTGGTTTTGA 166 ||||||||| | | | |||| | |||||| |||||| ||||| ||||||||||||||||| Sbjct 172 CTTGTCTTG-AGTTACCATGCTCATTCTGGCTCTATTGTCAAATTTCTTCCTGGTTTTGA 230 Query 167 AGGCCCTCTTCCTTTCGAACTTGAAACCGGGTACATTGGTATTGGTGAGGACGAG-AATG 225 ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| || | Sbjct 231 AGGCCCTCTTCCTTTTGAACTTGAAACCGGGTATATTGGTATTGGTGAGGAAGAGGAA-G 289 Query 226 TGCAATT-TTTCTACTATTTCATCAAATCTGAAAACAATCCAAAAGAAGATCCTCTTCTT 284 ||||||| ||| ||||||||||| |||||||| || |||||||||||||| ||||||||| Sbjct 290 TGCAATTGTTT-TACTATTTCATAAAATCTGAGAAGAATCCAAAAGAAGACCCTCTTCTT 348 Query 285 ATATGGTTAAATGGAGGACCTGGATGTTCTTGTCTTGGTGGTATTATTTTTGAGAACGGA 344 ||||||||| |||||| ||||||||||| | ||| ||| || |||||||||| ||| Sbjct 349 CTATGGTTAACTGGAGGGCCTGGATGTTCCTCTCTCACTGGCCTTCTTTTTGAGAATGGA 408 Query 345 CCGGTGGGTTTGAAGTTTGAGGTGTT-CAACGGAAGTGCTCCTTCTTTGTTCTCTACTAC 403 ||||||| ||||||||||||||| || ||| ||||||| ||| |||||| |||||||||| Sbjct 409 CCGGTGGCTTTGAAGTTTGAGGT-TTACAATGGAAGTGTTCCATCTTTGGTCTCTACTAC 467 Query 404 ATATTCATGGACAAAGATGGCAAACATTATATTCTTGGATCAGCCAGTAGGATCTGGCTT 463 ||||||||||||||||||||| ||||| ||||||||||||||||| || ||| ||||||| Sbjct 468 ATATTCATGGACAAAGATGGCCAACATAATATTCTTGGATCAGCCTGTTGGAGCTGGCTT 527 Query 464 CTCCTACTCAAAAACTCCAATTG---ATAAAACTGGTGACATAAGTGAAGT-AAAGAGGA 519 |||||| |||| ||||||| ||| |||||| | |||||| ||||||| |||| ||| Sbjct 528 CTCCTATTCAAGAACTCCACTTGTTGATAAAATTAGTGACACGGGTGAAGTTAAAG-GGA 586 Query 520 CCCATGAGTTTCTTCAAAAGTGGCTAAGCAGGCATCCACAATATTTCTCCAACCCTTTAT 579 | |||||||||||||||||||| |||||| |||| ||||| ||| ||||||||||| | Sbjct 587 TCTATGAGTTTCTTCAAAAGTGGTTAAGCAAACATCAACAATTTTTTTCCAACCCTTT-T 645 Query 580 -ATGTAGTTGGAGATTCTTATTCCGGTATGATTGT-CCCGGCCCTCGTTCAAGAAATCT- 636 |||| | ||||||||||||||||||||| |||| |||| |||| ||||||||||| | Sbjct 646 CATGTTGGCGGAGATTCTTATTCCGGTATGGTTGTTCCCG-CCCTAGTTCAAGAAAT-TG 703 Query 637 CACAAGGAAATTATATATGTTGCGAACCTCCTATAAATCTACAGGGTTATATGCTTGGAA 696 || ||||||||||| | || |||||||||||||||||||| || |||| Sbjct 704 CAAAAGGAAATTAT--------C-AA------ATAAATCTACAGGGTTATATCCTCGGAA 748 Query 697 ACCCTG-TAACATATA-TGGACTTTGAACAAAACT-TCCGCATTCCATATGCTTATGGTA 753 |||| | ||||| ||| || | | |||||| |||| || | |||||||||||| |||| | Sbjct 749 ACCC-GATAACAGATACTGAA-TCTGAACAGAACTATCAG-ATTCCATATGCTCATGGAA 805 Query 754 TGGGATTAATCTCCGACGAAATCTATGAGCCAATGAAGAGAATCTGCAACGGAAATTAT- 812 ||| ||||||||| || ||| | || ||| ||||||||||||||||||| | ||||||| Sbjct 806 TGGCATTAATCTCTGATGAACTATACGAGTCAATGAAGAGAATCTGCAAAGAAAATTATG 865 Query 813 TACAATGTGGATCCATCT-AACACACAATGTT-TGAAACTTACTGAA-GAATATCATAAG 869 | ||||||||| || || |||||| |||| | | ||||| | | || || ||||| ||| Sbjct 866 TG-AATGTGGATGCA-CTTAACACAAAATGCTAT-AAACTCA-TAAAAGATTATCAAAAG 921 Query 870 TGCACTGCCA-AAA-TAAATATCCATCACATATTAACACCAGATTGCGATGTAACCAATG 927 || | | | | ||| | |||| |||| |||||| ||| || |||||| | | Sbjct 922 TGTATT-C-ATAAACTGAATAAGTATCATATATTATTACCTGACTGCGAT--A-----T- 971 Query 928 TAACATCTCCTGATTG-TTATTATTATCCATAT-CATCTCATTGAA-TGTTGGGCTAACG 984 ||||||||||||||| || |||| || ||| | |||||| || | |||||| |||| Sbjct 972 -AACATCTCCTGATTGCTTTTTAT-ATAGGTATTC-TCTCAT-GACCTTTTGGGCCAACG 1027 Query 985 ACGAGAGCGTTCGCGAAGCTCTTCATATTGAA-AAGGGTAGTAAAGGAAAATGGGCGCGA 1043 || |||||||||||| |||||| || | | || ||||| |||| |||| |||||| || | Sbjct 1028 ACAAGAGCGTTCGCGGAGCTCTGCA-AGTCAATAAGGGAAGTATAGGAGAATGGGTGCAA 1086 Query 1044 TGTAA-TCGGAC--TATTCCATACAATCACGACATTGTA-AGCAGCATAC-CATATCACA 1098 ||||| | | |||| | || ||| ||||||| | |||||| | | |||| || | Sbjct 1087 TGTAACTATAAAAATATTTCGTATAATTACGACATCA-AGAGCAGCGT-CGCATACCATA 1144 Query 1099 TGAATAACAGCATC-AGTGGATACCGATCTCTTATTTACAGTGGTGATCACGACATCGC- 1156 |||| || || || | ||| |||||||||||||| |||| |||||| || || || | Sbjct 1145 TGAAGAATAGTATTGA-TGGCTACCGATCTCTTATCTACAATGGTGACCATGATAT-GAT 1202 Query 1157 GGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTACTCCCCCATTCATAA 1216 ||| ||||| ||||||||||||||||||||||||||||||||||| ||| || | || | Sbjct 1203 GGTGCCTTTCCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTATTCCATCACTGATGA 1262 Query 1217 CTGGAGGCCATGGATGATAAACAATCAAATCGCTGGATACACGAGAGCTTATTCCAATAA 1276 |||||||| |||||||||||| |||||||||||||||| || ||| ||||||||||||| Sbjct 1263 TTGGAGGCCTTGGATGATAAACGATCAAATCGCTGGATATACAAGAACTTATTCCAATAA 1322 Query 1277 GATGACATTTGCTACTATCAAAGCAAGT 1304 |||||||||||||||||||| |||||| Sbjct 1323 AATGACATTTGCTACTATCAAGGCAAGT 1350 > Ahg932268 jgi|Araly1|932268|scaffold_400256.1 Length=604 Score = 414 bits (224), Expect = 8e-115 Identities = 364/431 (84%), Gaps = 11/431 (3%) Strand=Plus/Plus Query 974 TTGGGCTAACGACGAGAGCGTTCGCGAAGCTCTTCATATTGA-AAAGGGTAGTAAAGGAA 1032 |||||| || ||||||| ||||| ||||||||||| | | | ||||| |||| ||||| Sbjct 179 TTGGGCCAATAACGAGAGGGTTCGTGAAGCTCTTCA-AATCAGGAAGGGAAGTATAGGAA 237 Query 1033 AATGGGCGCGATGTAATCGGACTATTCCA-TACAATCACGACATTGTAAGCAGCATACCA 1091 ||||| ||||||||| ||| |||| | |||||| | |||||| | |||||||||||| Sbjct 238 AATGGATACGATGTAATAGGAATATT-GATTACAATGAAGACATTATTAGCAGCATACCA 296 Query 1092 TATCACATGAATAACAGCATCAGTGGATACCGATCTCTTATTTACAGTGGTGATCACGAC 1151 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 297 TATCATATGAATAACAGCATCAACGGATACCGATCTCTTATTTACAGTGGTGATCACGAC 356 Query 1152 ATCGCGGTCCCTTTTCTTGCAACTCAAGCCTGGATAAGATCTCTCAATTACTCCCC-CAT 1210 || | ||| ||||| ||||||||| |||| |||||||||||||||||||| ||| ||| Sbjct 357 ATGGAGGTACCTTTCCTTGCAACTGAAGCTTGGATAAGATCTCTCAATTA-TCCTATCAT 415 Query 1211 TCATAACTGGAGGCCATGGATGATAAACAATCAAATCGCTGGATACACGA-GAGCTTATT 1269 | || | |||||||| ||||| ||||||||||| || ||||||||||||| || || || Sbjct 416 TGATGATTGGAGGCCTTGGATAATAAACAATCAGATTGCTGGATACACGATGACCT-ATG 474 Query 1270 CCAATAAGATGACATTTGCTACTATCAAAGCAAGTGTGGACACACGGCAGAGTATAGACC 1329 ||||||||||||||| ||||||| |||||| | ||| || ||||| |||||||||| ||| Sbjct 475 CCAATAAGATGACATATGCTACTGTCAAAGGAGGTG-GG-CACACTGCAGAGTATAAACC 532 Query 1330 AAACGAGACCTTTATCATGTTCCAAAGGTGGATCAGTGGCCAACCCCTGTAACAAAAG-G 1388 | | |||| |||||||||||||||||| ||||| ||||||||||| |||||| ||||| | Sbjct 533 AGAGGAGAGCTTTATCATGTTCCAAAGATGGATAAGTGGCCAACCTCTGTAATAAAAGAG 592 Query 1389 CTTATGACCTT 1399 | ||| |||| Sbjct 593 ATGATGGCCTT 603 Score = 145 bits (78), Expect = 1e-33 Identities = 95/103 (92%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 97 TTCTGCTTCTGCTTGTCTTGTA-TCATCATGTTGATTCTGCCTCTATCGTCAAGTTTCTT 155 |||||||||||||||||||| | ||||||| |||||| | ||| ||||||||||||||| Sbjct 49 TTCTGCTTCTGCTTGTCTTG-AGACATCATGCTGATTCCGGCTCCATCGTCAAGTTTCTT 107 Query 156 CCTGGTTTTGAAGGCCCTCTTCCTTTCGAACTTGAAACCGGGT 198 |||||||||||||||||||||||||||||||| |||||||||| Sbjct 108 CCTGGTTTTGAAGGCCCTCTTCCTTTCGAACTAGAAACCGGGT 150 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61287204205 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5