BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G29080.1 Length=3000 Score E Sequences producing significant alignments: (Bits) Value Ahg344684 jgi|Araly1|344684|fgenesh1_pg.C_scaffold_4001026 3784 0.0 Ahg919477 jgi|Araly1|919477|scaffold_100758.1 2032 0.0 > Ahg344684 jgi|Araly1|344684|fgenesh1_pg.C_scaffold_4001026 Length=2457 Score = 3784 bits (2049), Expect = 0.0 Identities = 2327/2457 (95%), Gaps = 35/2457 (1%) Strand=Plus/Plus Query 293 ATGATCTTCTTCTCTAAGCTTAATCGCTCCATTTCTCGTTCAAAGGGATTTTTGTACGGT 352 |||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||| Sbjct 1 ATGATCTTCTTCTCTAAGCTTAGTCGCTCCATTTCTCGTTCAAGGGGGTTTTTGTACGGT 60 Query 353 GGTGGTGTTAGAT---C-G-G-----C--GGCAAGGCTACTTACTTCGCCGGGACTTGAG 400 ||||||||||||| | | | | ||||||||||||| ||||||| || |||||| Sbjct 61 GGTGGTGTTAGATCGGCGGTGTTAAACGAGGCAAGGCTACTTGCTTCGCCAGGTCTTGAG 120 Query 401 GCGGCGTCTGTGAATGAAGTGGAAGGTGGATTAGGGTTTATAAGAAGACACTTTGCTTCT 460 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCGGCGTCTGTGAATCAAGTGGAAGGTGGATTAGGGTTTATAAGAAGACACTTTGCTTCT 180 Query 461 TTAGCTTCACGGAAGGGTTTAGTCAATAATGATTTGATTGGTGTTTTTGCTAATCC-AAG 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 181 TTAGCTTCACGGAAGGGTTTAGTCAATAATGATTTGATTGGTGTTTTTGCTAATCCAAAG 240 Query 520 ACTTCGTAGATTCTTCTCTGATGAAGCTCCTAAGAAGAAGAATTATGAGAACTATTTTCC 579 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 A-TTCGTCGATTCTTCTCTGATGAAGCTCCTAAGAAGAAGAATTATGAGAACTATTTTCC 299 Query 580 TAAAGAT---AAGCAAGAACCCAAGAGTGATCAGAAATCAGAGCATAAAGAGGGTTCAGA 636 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 TAAAGATACAAAGCAAGAACCCAAGAGTGATCAGAAATCAGAGCATAAAGAGGGTTCAGA 359 Query 637 AAAGAATGAAAATGAGAATGTGGGAGATATGTTCATGAACCGATTCCAAAATTTGCTAAT 696 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct 360 GAAGAATGAAAATGAGAACGTGGGAGATATGTTCATGAATCGATTCCAAAATTTGCTGAT 419 Query 697 TCCTCTACTAGCTCTTGCTGTATTCTTTTCTACTTTCTCGTTTGGCTCTGGGG---AACA 753 ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| |||| Sbjct 420 TCCTCTATTAGCTCTTGCTGTGTTCTTTTCTTCTTTCTCGTTTGGCTCTGGGGACCAACA 479 Query 754 ACA---ACA----G----A--TA--AGTTTCCAGGAGTTCAAAAACAAGCTACTCGAGCC 798 ||| | | | | || |||||||||||||||||||||||||| |||||||| Sbjct 480 ACAGGCAAATGTGGTTCTACTTATTAGTTTCCAGGAGTTCAAAAACAAGCTTCTCGAGCC 539 Query 799 TGGTTTAGTTGACCACATAGATGTTTCAAACAAATCAGTAGCAAAAGTCTACGTGAGGAG 858 ||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 540 AGGTCTAGTTGACCACATAGATGTTTTAAACAAATCAGTAGCAAAAGTCTATGTGAGGAG 599 Query 859 CACACCGAAAGACCAACAAACAACTGACGTTGTCCATGGTAATGGTAACGGTATTCCTGC 918 | ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct 600 CTCACCGAAAGACCAACAAACAACTGACGTTGTCCATGGCAATGGTAATGGTATACCTGC 659 Query 919 TAAAAGAACTGGTGGTCAGTATAAGTACTACTTCAATATCGGTAGTGTTGATTCTTTTGA 978 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 TAAAAGAACAGGTGGTCAGTATAAGTACTACTTCAATATCGGTAGTGTTGATTCTTTTGA 719 Query 979 GGAGAAACTCGAAGAAGCTCAAGAAGCGTTAGGTGTTGATCGTCATGAATATGTTCCTGT 1038 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 720 GGAGAAACTCGAAGAAGCTCAAGAAGCGCTAGGTGTTGATCGTCATGAATATGTTCCTGT 779 Query 1039 CACATACGTCTCTGAAATGGTCTGGTATCAAGAGTTCATGAGGTTTGCACCGACTTTGTT 1098 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 780 CACATATGTCTCTGAAATGGTCTGGTATCAAGAGTTCATGAGGTTTGCACCGACTTTATT 839 Query 1099 GCTCTTGGGTACTCTGATCTATGGTGCGAGACGGATGCAAGGTGGATTGGGTGTAGGAGG 1158 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 840 GCTCTTGGGTACTCTTATCTATGGGGCGAGACGGATGCAAGGTGGATTGGGTGTAGGAGG 899 Query 1159 AACTGGCGGTAAGAATGGTCGTGGAATTTTCAATATAGGCAAAGCTACAATAACGAGAGC 1218 ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct 900 AACCGGCGGTAAGAATGGTCGTGGAATTTTCAATATAGGCAAAGCCACAATAATAAGAGC 959 Query 1219 TGATAAACATTCCAAGAATAAGATTTATTTCAAGGATGTTGCTGGATGTGACGAGGCTAA 1278 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 960 GGATAAACATTCCAAGAATAAGATTTATTTTAAGGATGTTGCTGGATGTGATGAGGCTAA 1019 Query 1279 ACAAGAAATTATGGAGTTTGTACATTTCCTTAAGAACCCAAAGAAGTATGAAGATTTGGG 1338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1020 ACAAGAAATTATGGAGTTTGTACATTTCCTTAAGAACCCAAAGAAGTATGAAGATTTGGG 1079 Query 1339 TGCTAAAATTCCGAAAGGTGCACTTTTAGTCGGTCCGCCTGGAACCGGAAAGACCCTTTT 1398 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1080 TGCTAAAATTCCGAAAGGGGCACTTTTAGTCGGTCCGCCTGGAACCGGAAAGACCCTTTT 1139 Query 1399 AGCAAAAGCCACAGCAGGAGAATCTGGTGTGCCATTTCTGTCTATTTCTGGCTCAGATTT 1458 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1140 AGCAAAAGCCACAGCGGGAGAATCGGGTGTGCCATTTCTGTCTATTTCTGGCTCAGATTT 1199 Query 1459 CATGGAGATGTTTGTTGGTGTTGGGCCTTCGAGGGTGAGACATTTGTTCCAAGAGGCGAG 1518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1200 CATGGAGATGTTTGTTGGTGTTGGGCCTTCGAGGGTGAGACATTTGTTCCAAGAGGCAAG 1259 Query 1519 ACAAGCTGCACCGAGCATTATATTTATCGATGAGATTGATGCTATTGGTCGGGCAAGAGG 1578 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 1260 ACAAGCTGCACCGAGCATTATATTTATAGATGAGATTGATGCGATTGGTCGGGCAAGAGG 1319 Query 1579 TCGTGGAGGTTTAGGCGGAAATGATGAGCGTGAAAGCACTCTGAATCAGTTGCTAGTTGA 1638 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1320 TCGTGGAGGTTTAGGCGGTAACGATGAGCGTGAAAGCACTCTGAATCAGTTGCTAGTTGA 1379 Query 1639 AATGGATGGTTTTGGTACAACCGCTGGTGTTGTGGTTCTTGCTGGAACCAACAGACCGGA 1698 |||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 1380 AATGGACGGTTTTGGTACAACCGCTGGAGTTGTGGTTCTTGCTGGGACCAACAGACCGGA 1439 Query 1699 TATTTTGGATAAAGCTTTGTTAAGGCCTGGACGTTTTGATCGCCAGATAACTATTGATAA 1758 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1440 TATTTTGGATAAAGCTTTGTTAAGGCCTGGCCGTTTTGATCGCCAGATAACCATTGATAA 1499 Query 1759 ACCTGATATCAAAGGGCGTGATCAGATTTTCAAGATTTACTTGAAGAAGATCAAACTTGA 1818 ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1500 ACCTGATATTAAAGGGCGTGATCAGATTTTCCAGATTTACTTGAAGAAGATCAAACTTGA 1559 Query 1819 TCATGAGCCATCATATTACTCTCAAAGGCTTGCTGCTCTCACTCCCGGGTTTGCAGGAGC 1878 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| Sbjct 1560 TCATGAGCCATCATATTACTCTCAAAGGCTTGCGGCTCTCACTCCCGGATTTGCTGGAGC 1619 Query 1879 TGACATTGCGAATGTCTGTAACGAAGCAGCTCTTATTGCTGCTAGACACGAAGGAGCAAC 1938 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1620 TGACATTGCGAATGTCTGTAACGAAGCAGCTCTTATTGCTGCTAGACACGAAGGAGCAAC 1679 Query 1939 GGTTACTATGGCACACTTTGAATCTGCGATTGATCGTGTTATTGGTGGTCTTGAGAAGAA 1998 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1680 GGTTACAATGGCACACTTTGAATCTGCAATTGATCGTGTTATTGGTGGTCTTGAGAAGAA 1739 Query 1999 AAACCGGGTGATAAGCAAGTTGGAGCGACGTACAGTTGCATATCATGAATCTGGTCACGC 2058 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || || Sbjct 1740 AAACCGGGTGATAAGCAAGTTGGAGCGACGTACGGTTGCATATCATGAATCTGGGCATGC 1799 Query 2059 AGTTGTAGGGTGGTTCCTTGAACATGCAGAGCCGTTACTGAAAGTGACTATTGTACCACG 2118 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1800 AGTTGTAGGATGGTTCCTCGAACATGCAGAGCCGTTGCTGAAAGTGACTATTGTACCACG 1859 Query 2119 TGGCACAGCGGCTCTCGGATTTGCACAATACGTTCCAAACGAAAACCTTCTCATGACCAA 2178 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1860 TGGCACAGCGGCTCTCGGATTTGCACAATATGTTCCAAACGAAAACCTTCTCATGACCAA 1919 Query 2179 AGAGCAACTCTTTGACATGACTTGCATGACTCTCGGAGGCCGTGCAGCTGAGCAGGTATT 2238 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 1920 AGAGCAACTCTTTGACATGACTTGCATGACCCTCGGTGGCCGTGCAGCTGAGCAGGTATT 1979 Query 2239 GATAGGTAAAATCTCAACGGGTGCGCAGAACGATCTAGAGAAGGTGACGAAGATGACTTA 2298 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1980 GATAGGTAAAATCTCAACGGGTGCGCAGAACGATCTAGAGAAGGTGACAAAGATGACGTA 2039 Query 2299 CGCGCAAGTAGCTGTGTATGGTTTCAGTGACAAGGTTGGGCTACTCTCGTTTCCACCAAG 2358 |||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct 2040 TGCGCAAGTAGCTGTATACGGTTTCAGTGACAAGGTTGGCCTGCTCTCGTTTCCCCCAAG 2099 Query 2359 GGATGATGGCTACGACTTCTCTAAACCATACAGCAACAAAACCGGTGCTATCATAGACGA 2418 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 2100 GGATGATGGCTACGACTTCTCTAAACCATACAGCAACAAAACAGGCGCTATCATAGACGA 2159 Query 2419 AGAAGTTAGGGACTGGGTGGCCAAAGCTTATGAGCGGACCGTAGAGCTGGTTGAGGAACA 2478 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2160 AGAAGTTAGGGAATGGGTGGCCAAAGCTTATGAGCGGACCGTAGAGCTGGTTGAGGAACA 2219 Query 2479 CAAAGTGAAAGTGGCTGAGATCGCCGAGCTTTTACTAGAGAAAGAGGTGTTGCATCAGGA 2538 ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2220 CAAAGAGAAAGTGGCTCAGATCGCCGAGCTTTTACTAGAGAAAGAGGTGTTGCATCAGGA 2279 Query 2539 TGATCTCTTAAAAATTTTAGGTGAACGTCCGTTTAAGTCAGCTGAGGTCACTAATTATGA 2598 ||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct 2280 TGATCTCTTAAAAGTTTTAGGTGAACGTCCATTTAAGTCCGCTGAGGTGACTAATTATGA 2339 Query 2599 CCGGTTCAAGTCTGGGTTTGAAGAGACTGAGAAGGACTCAGCCGCCACCCCTACAGTGGA 2658 ||||||||||||||||||||| ||||||||||||||||||||| |||| || |||||||| Sbjct 2340 CCGGTTCAAGTCTGGGTTTGAGGAGACTGAGAAGGACTCAGCCCCCACGCCGACAGTGGA 2399 Query 2659 GCCTGTGGTGGATGATGGAGCTCCCCCGCCGTTTGAACCCCAGGTTGTTCCGACGTA 2715 ||||||||| ||||| |||||||| || ||| ||||||| |||||| |||||||||| Sbjct 2400 GCCTGTGGTAGATGAAGGAGCTCCTCCTCCGCTTGAACCACAGGTTATTCCGACGTA 2456 > Ahg919477 jgi|Araly1|919477|scaffold_100758.1 Length=2482 Score = 2032 bits (1100), Expect = 0.0 Identities = 1958/2365 (83%), Gaps = 88/2365 (4%) Strand=Plus/Plus Query 395 CTTGAGGCGGCGTCTGTGAATGAAGTGGAAGGTGGATTAGGGTTTATAAGAAGACACTTT 454 ||||||||||| | || ||| | ||||| ||||||||||||||| | || | |||||| Sbjct 141 CTTGAGGCGGC--C-GTCAATCAGGTGGATGGTGGATTAGGGTTTCTGAGGCGGCACTTT 197 Query 455 GCTTCTTTAGCTTCACGGAAGGGTTTAG-TCAATAATGATTTGATTGGTGTTTTTGCTAA 513 |||||||||||| | |||||||| ||| | |||||| | | ||||| ||||| Sbjct 198 GCTTCTTTAGCTGCTCGGAAGGGACTAGAT-GCCGGTGATTTAAGCCGCGTTTTCGCTAA 256 Query 514 TCCAAGACTT-CGTAGATTCTTCTCT-GATGAAGCTCCTAAGAAGAAGAATTATGAGAAC 571 || ||| || ||| | ||||| ||| | |||| || ||||| ||||||||||||||| Sbjct 257 CCCTAGA-TTGCGTCGGTTCTTTTCTAGCCAAAGC-CCGAAGAAAAAGAATTATGAGAAC 314 Query 572 TATTTTCCTAAAG--A-TAAGCAAGAACCCAAGAGTGATCAGAAATCAG-AGCATAAAGA 627 || | ||| |||| | |||| ||| |||||||| ||| |||||||| | | | ||| Sbjct 315 TACTATCCAAAAGACAGTAAGAAAGCACCCAAGAATGAGCAGAAATCCGAATC-CGGAGA 373 Query 628 GGGTTCAGAA-AAGAATGAAAATGAGAATG-TGGGAGATATGTTCATGAACCG-AT-TCC 683 ||||||| || ||||||||||| ||||||| |||| || ||||||| || | || | | Sbjct 374 GGGTTCA-AAGAAGAATGAAAACGAGAATGTTGGG-GACATGTTCACCAA-GGAATAT-C 429 Query 684 AAAATTTGCTAATTCCTCT-ACTAGCTC-TTGCTGTATTCTTTTCTACTTTCTCGT-TTG 740 ||||| || |||||||||| | | || | ||||| || || ||||||||||||| | ||| Sbjct 430 AAAATATGTTAATTCCTCTGA-TGGC-CATTGCTTTAATCCTTTCTACTTTCTC-TCTTG 486 Query 741 GCTCTGGGGAACAACAACAGATAAGTTTCCAGGAGTTCAAAAACAAGCTACTCGAGCCTG 800 | || | ||||| |||||||| |||||||||||||||||||||||||| || ||||||| Sbjct 487 GTTCCCGAGAACAGCAACAGATTAGTTTCCAGGAGTTCAAAAACAAGCTCCTTGAGCCTG 546 Query 801 GTTTAGTTGACCACATAGATGTTTCAAACAAATCAGTAGCAAAAGTCTACGTGAGGAGCA 860 || |||| || |||||||||||||| ||||||||||| || |||||||| |||||||| Sbjct 547 GTCTAGTGGATCACATAGATGTTTCTAACAAATCAGTCGCGAAAGTCTATGTGAGGAGTT 606 Query 861 CACCGAAAGACC-AACAAAC--AACTGACGTTGTCCATGGTAATGGTAACGGTA-TTCCT 916 |||||||| ||| ||| ||| || || ||||| || ||| |||||| || | ||||| Sbjct 607 CACCGAAAAACCAAAC-AACGGAA--GAAGTTGTTCAAGGTCCTGGTAATGG-AGTTCCT 662 Query 917 GCTAAAAGAAC-TGGTGGTCAGTATAAGTACTACTTCAATATCGGTAGTGTTGATTCTTT 975 ||| |||| || |||||||||||||||||||||||| ||||| ||||| ||||| | || Sbjct 663 GCT-AAAGGACGTGGTGGTCAGTATAAGTACTACTTTAATATTGGTAGCGTTGAAACATT 721 Query 976 TGAGGAGAAACTCGAAGAAGCTCAAGAAGCGTTAGGTGTTGA-TCGTCATGAATATGTTC 1034 |||||||||||| ||||| |||||||||||| |||| ||| | || |||||| | ||||| Sbjct 722 TGAGGAGAAACTTGAAGAGGCTCAAGAAGCGATAGGCGTTAATTC-TCATGACTTTGTTC 780 Query 1035 CTGTCACATACGTCTCTGAAATGGTCTGGTATCAAGAGTTCATGAGGTTTGCACCGACTT 1094 ||||||| |||||||| |||||| ||||||| || || | |||||||||||||||||| Sbjct 781 CTGTCACCTACGTCTCGGAAATGATCTGGTACCAGGAAATGTTGAGGTTTGCACCGACTT 840 Query 1095 T-GTTGCTCTTGGGTACTCTGATCTATGGTGCGAGACGGATGCAAGGTGGA-T-TG-GGT 1150 | || ||||||||||| || || ||||| || |||||||||||||||||| | | ||| Sbjct 841 TACTT-CTCTTGGGTACGCTAATTTATGGGGCAAGACGGATGCAAGGTGGACTGGGAGGT 899 Query 1151 GTAGGAGGAACTGGCGGTAAGAATGGTCGTGGAATTTTCAATATAGGCAAAGCTAC-AAT 1209 ||||| ||| |||| || ||| ||| |||||||||||||||||||| |||||| | ||| Sbjct 900 GTAGGCGGACCTGGTGGGAAGGGTGGCCGTGGAATTTTCAATATAGGGAAAGCT-CAAAT 958 Query 1210 AACGAGAGCTGATAAACATTCCAAGAATAAGATTTATTTCAAGGATGTTGCTGGATGTGA 1269 |||||||| |||||| |||||||||||||||| ||||| || |||||||| |||||||| Sbjct 959 TACGAGAGCAGATAAAAATTCCAAGAATAAGATATATTTTAAAGATGTTGCGGGATGTGA 1018 Query 1270 CGAGGCTAAACAAGAAATTATGGAGTTTGTACATTTCCTTAAGAACCCAAAGAAGTATGA 1329 ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||| Sbjct 1019 GGAGGCTAAACAAGAAATTATGGAATTTGTGCATTTCCTTCAGAACCCAAAGAAATATGA 1078 Query 1330 AGATTTGGGTGCTAAAATTCCGAAAGGTGCACTTTTAGTCGGTCCGCCTGGAACCGGAAA 1389 ||||||||| |||||||| || |||||||| |||||||| || || || || || ||||| Sbjct 1079 AGATTTGGGAGCTAAAATCCCAAAAGGTGCGCTTTTAGTTGGCCCACCAGGGACGGGAAA 1138 Query 1390 GACCCTTTTAGCAAAAGCCACAGCAGGAGAATCTGGTGTGCCATTTCTGTCTATTTCTGG 1449 ||||||| |||||||||| || || |||||||| | ||| || |||||||| || ||||| Sbjct 1139 GACCCTTCTAGCAAAAGCTACTGCGGGAGAATCAGCTGTACCGTTTCTGTCAATATCTGG 1198 Query 1450 CTCAGATTTCATGGAGATGTTTGTTGGTGTTGGGCCTTCGAGGGTGAGACATTTGTTCCA 1509 |||||||||||||| ||||||||||||||||| ||||| || |||||| | ||||| || Sbjct 1199 TTCAGATTTCATGGAAATGTTTGTTGGTGTTGGACCTTCAAGAGTGAGAAACTTGTTTCA 1258 Query 1510 AGAGGCGAGACAA-GCTGCACCGAGCATTATATTTATCGATGAGATTGATGCTATTGGTC 1568 |||||| |||||| | |||||| ||||| |||||||| |||||||| ||||| ||||| | Sbjct 1259 AGAGGCTAGACAATG-TGCACCTAGCATAATATTTATTGATGAGATCGATGCGATTGGCC 1317 Query 1569 GGGCAAGAGGTCGTGGAGG-TT-T-AGGCGGAAATGATGAGCGTGAAAGCACTCTGAATC 1625 | ||||||||||||||||| || | || ||||||||||||||||||||||| || |||| Sbjct 1318 GTGCAAGAGGTCGTGGAGGTTTCTCTGGTGGAAATGATGAGCGTGAAAGCACACTTAATC 1377 Query 1626 AGTTGCTAGTTGAAATGGATGGTTTTGGTACAACCGCTGGTGTTGTGGTTCTTGCTGGAA 1685 || ||||||||||||||||||| |||||||| |||||||| ||||| || |||||||| | Sbjct 1378 AGCTGCTAGTTGAAATGGATGGATTTGGTACTACCGCTGGAGTTGTCGTCCTTGCTGGGA 1437 Query 1686 CCAACAGACCGGATATT-TTGGATAAAGCTTTGTTAAGGCCTGGACGTTTTGATCGCCAG 1744 | ||||| || |||||| || ||||||||||| ||| | ||||| || |||||||||||| Sbjct 1438 CTAACAGGCCAGATATTCTT-GATAAAGCTTTATTACGACCTGGCCGGTTTGATCGCCAG 1496 Query 1745 ATAACTATTGATAAACCTGATATCAAAGGGCGTGATCAGATTTTCAAGATTTACTTGAAG 1804 ||||| || |||||||||||||| ||||| ||||||||||| ||| |||| ||| ||||| Sbjct 1497 ATAACCATAGATAAACCTGATATTAAAGGCCGTGATCAGATATTCCAGATATACCTGAAG 1556 Query 1805 AAGATCAAACTTGATCATGAGCCATCATATTACTCTCAAAGGCTTGCTGCTCTCACTCCC 1864 ||||||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||||| Sbjct 1557 AAGATCAAACTTGATCACGAGCCCTCATATTACTCGCAAAGGCTTGCAGCCCTCACTCCC 1616 Query 1865 GGGTTTGCAGGAGCTGACATTGCGAATGTCTGTAACGAAGCAGCTCTTATTGCTGCTAGA 1924 || ||||| ||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct 1617 GGATTTGCTGGAGCTGACATTGCGAATGTCTGTAACGAGGCGGCTCTTATTGCTGCCAGA 1676 Query 1925 CACGAAGGAGCAACGGTTACTATGGCACACTTTGAATCTGCGATTGATCGTGTTATTGGT 1984 || ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct 1677 CATGAAGGAGCAACAGTTACAATGGCACACTTTGACTCTGCAATTGATCGTGTTATTGGA 1736 Query 1985 GGTCTTGAGAAGAAAAACCGGGTGATAAGCAAGTTGGAGCGACGTACAGTTGCATATCAT 2044 ||||| ||||||||||||||||| ||||||||| |||||| |||||||||||||||||| Sbjct 1737 GGTCTGGAGAAGAAAAACCGGGTAATAAGCAAGCAGGAGCGCCGTACAGTTGCATATCAT 1796 Query 2045 GAATCTGGTCACGCAGTTG-TAGGGTGGTTCCTTGAACATGCAGAGCCGTTACTGAAA-G 2102 |||||||| ||||| |||| | || |||||||| |||||||| || || || || ||| | Sbjct 1797 GAATCTGGCCACGCGGTTGCT-GGTTGGTTCCTGGAACATGCGGAACCATTGCT-AAAGG 1854 Query 2103 TGACTATTGTACCACGTGGCACAGCGGCTCTCGGATTTGCACAATACGTTCCAAACGAAA 2162 |||||||||| || ||||||||||| || ||||| ||||| || || |||||||| |||| Sbjct 1855 TGACTATTGTTCCTCGTGGCACAGCAGCGCTCGGGTTTGCCCAGTATGTTCCAAATGAAA 1914 Query 2163 ACCTT-CTCATGACCAAAGAGCAACTCTTTGACATGACTTGCATGACTCTCGGAGGCCGT 2221 | ||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 1915 A-CTTGCTCATGACAAAAGAACAACTCTTTGACATGACTTGCATGACTCTCGGGGGCCGG 1973 Query 2222 GCAGCTGAGCAGGTATTGATAGGTAA-AATCTCAAC-GGGTGCGCAGAACGATCTAGAGA 2279 |||||||| |||||||| ||||| || ||| || || ||| || ||||||||||| || | Sbjct 1974 GCAGCTGAACAGGTATTAATAGG-AAGAATATCGACCGGG-GCTCAGAACGATCTGGAAA 2031 Query 2280 AGGTGACGAAGATGACTTACGCGCAAGTAGCTGTGTATGGTTTCAGTGACAAGGTTGGGC 2339 ||||||| |||||||||||||||||||| || ||||| || ||||| |||||| | ||| Sbjct 2032 AGGTGACTAAGATGACTTACGCGCAAGTGGCGGTGTACGGATTCAGCGACAAGATAGGGT 2091 Query 2340 TACTCTCGTTTCCACCAA-GGGATGATGGCTACGACTTCTCTAAACCATACAGCAACAAA 2398 | || || || || | || |||| | | |||| ||||| || || |||||||||| | Sbjct 2092 TGCTTTCATTCCCGC-AACGGGA--A-G---ACGAGTTCTCCAAGCCGTACAGCAACAGA 2144 Query 2399 ACCGGTGCTATCATAGACGAAGAAGTTAGGGACTGGGTGGCCAAAGCTTATGAGCGGACC 2458 || ||||| || ||||| ||||| || | || ||||||| |||||||| | ||||| Sbjct 2145 ACTGGTGCGATGATAGATGAAGAGGTCCGAGAATGGGTGGGGAAAGCTTACAAACGGACG 2204 Query 2459 GTAGAGCTGGTTGAGGAACACAAAGTGAAAGTGGCTGAGATCGCCGAGCTTTTACTAGAG 2518 || |||||| | ||||||||||||| | |||||||| ||||||| ||||| || |||||| Sbjct 2205 GTTGAGCTGATCGAGGAACACAAAGAGGAAGTGGCTCAGATCGCTGAGCTCTTGCTAGAG 2264 Query 2519 AAAGAGGTGT-TGCATCAGGATGATCTCTTAA-AAATT-TTAGGTGAACGTCCGTTTAAG 2575 || ||||| | |||||||||||||||| | | ||| | || ||||| ||||| |||||| Sbjct 2265 AAGGAGGT-TCTGCATCAGGATGATCT-T-ACTAAAGTATTGGGTGAGCGTCCATTTAAG 2321 Query 2576 TCAGCTGAGGTCA-CTAATTATGACCGGTTCAAGTCTGGGTTTGAAGAGACTGAGAAGGA 2634 || | |||| || | ||||| ||| |||| || ||||| ||||||||||| |||||||| Sbjct 2322 TCGGGTGAGA-CAACGAATTACGACAGGTTTAAATCTGGATTTGAAGAGACGGAGAAGGA 2380 Query 2635 CT-C-AGCCGCCACCCC-TACAG-TGGAGCCTGTGGTGGATGATGGAGCTCCCCCGCCGT 2690 | || | | | | | | || ||||||||| ||||||||||| ||| |||| | Sbjct 2381 GAGCCAGAAGG-AGTCTGTGCCGGTGAAGCCTGTGGAGGATGATGGAGTTCCACCGC--T 2437 Query 2691 TTGAACCCCAGGTTGTTCCGACGTA 2715 | || || ||||| ||||||||||| Sbjct 2438 T-GAGCCACAGGTGGTTCCGACGTA 2461 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 113280388630 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5