BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G29350.1 Length=1266 Score E Sequences producing significant alignments: (Bits) Value Ahg481850 jgi|Araly1|481850|fgenesh2_kg.4__910__AT2G29350.1 1653 0.0 Ahg481843 jgi|Araly1|481843|fgenesh2_kg.4__903__AT2G29290.2 894 0.0 Ahg481853 jgi|Araly1|481853|fgenesh2_kg.4__913__AT2G29370.1 835 0.0 Ahg497196 jgi|Araly1|497196|fgenesh2_kg.41__4__AT2G29150.1 789 0.0 Ahg481835 jgi|Araly1|481835|fgenesh2_kg.4__895__AT2G29150.1 754 0.0 > Ahg481850 jgi|Araly1|481850|fgenesh2_kg.4__910__AT2G29350.1 Length=1118 Score = 1653 bits (895), Expect = 0.0 Identities = 1011/1065 (95%), Gaps = 15/1065 (1%) Strand=Plus/Plus Query 16 GAGGTTTCAAAGTTCAAAACTATCACAACTAGTCTTGATCAATTCTATATAAGATCTGTG 75 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct 1 GAGGTTTCAAAGTTCAAAACTATCACTACTAGTCTTGATCAATTCTCTATAAGATCTGTG 60 Query 76 ATCTTGGTTGAAGAAAAGAATCGTCGTAGGTTGATATTTAACAAGGAATGGCAAAGGAAG 135 |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||| Sbjct 61 ATCTTGGTTGAAGAAAAGAATCGTCGCAGGTTG--A--TAACAAGGAATGGCAAAGGAAG 116 Query 136 GGGGCTTGGGAGAGAACTCAAGATGGAGTCTTGGAGGCATGACCGCTCTTGTCACTGGTG 195 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 117 GGGGCTTGGGAGAGAACTCAAGATGGAGTCTTGGAGGCATGAACGCTCTTGTCACTGGTG 176 Query 196 GCTCTAAAGGCATCGGGGAAGCTGTGGTGGAGGAACTAGCCATGTTGGGAGCAAAAGTCC 255 |||||||||||||||||||||||||||| ||||||||||| || |||||||||| ||||| Sbjct 177 GCTCTAAAGGCATCGGGGAAGCTGTGGTAGAGGAACTAGCAATATTGGGAGCAAGAGTCC 236 Query 256 ACACGTGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACGTGAATGGCAAGCAAAAG 315 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 237 ACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACGTGAATGGCAAGCCAAAG 296 Query 316 GGTTTCAGGTCACCACTTCTGTCTGCGACGTCTCTTCTCGTGACCAACGAGTGAAACTCA 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 297 GGTTTCAGGTCACCACTTCTGTCTGCGACGTCTCTTCTCGTGACCAACGAGTGAAACTCA 356 Query 376 TGGAAACTGTTTCCTCTCTCTACCAAGGAAAACTCAACATCCTCGTCAACAATGTGGGAA 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 TGGAAACTGTTTCCTCTCTCTACCAAGGAAAACTCAACATCCTCGTCAACAATGTGGGAA 416 Query 436 CGTCAATATTCAAGCCGACCACAGAGTATACAGCAGAAGATTTCTCTTTTGTAATGGCTA 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 417 CGTCAATATTCAAGCCGACCACAGAGTATACAGCAGAAGATTTCTCTTTTGTAATGGCTA 476 Query 496 CAAATCTCGAGTCAGCTTTCCATCTCTCACAGCTTGCCCACCCATTGTTAAAAGCCTCTG 555 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct 477 CAAATCTCGAGTCAGCTTTCCATCTCTCACAGCTTGCGCACCCATTGTTGAAAGCCTCCG 536 Query 556 GCTCAGGGAGCATCGTGCTCATATCCTCTGCTGCTGGAGTCGTGCATGTCAATGTTGGAT 615 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 537 GCTCAGGGAGCATCGTGCTCATGTCCTCTACTGCTGGAGTCGTGCATGTCAATGTTGGAT 596 Query 616 CCATCTATGGAGCAACCAAAGGAGCCATGAATCAGCTGGCTAGAAACTTAGCTTGCGAAT 675 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 597 CCATCTATGGAGCAACCAAAGGAGCCATGAATCAGCTGGCTAGAAACTTAGCTTGCGAAT 656 Query 676 GGGCGAGCGACAACATAAGGACGAACTCTGTTTGTCCTTGGTATATCACAACTCCTTTAA 735 |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| | Sbjct 657 GGGCGAGCGACAACATAAGGACTAACTCTGTTTGTCCTTGGTATATCACAACTTCTTTGA 716 Query 736 GTAACGATTTTTTCGATGAAGAGTTTAAGAAAGAAGCGGTGCGTACGACACCAATGGGGC 795 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | Sbjct 717 GTAACGATTTTTTCGATGAAGAGTTTAAGAAAGAAGCGGTGCGTAGGACACCGATGGGAC 776 Query 796 GTGTTGGAGAAGCAAATGAAGTCTCACCGCTTGTGGCATTTCTTTGTCTTCCTTCAGCTT 855 |||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 777 GTGTTGGAGAGGCAAATGAAGTCTCATCGCTTGTGGCATTTCTTTGTCTTCCTGCAGCTT 836 Query 856 CTTATATTACTGGTCAGACCATTTGCGTTGACGGCGGTGCCACTGTTAACGGTTTTTCCT 915 ||||||||||||||||||||||||| |||||||| ||||||||||| || ||| |||||| Sbjct 837 CTTATATTACTGGTCAGACCATTTGTGTTGACGGAGGTGCCACTGTCAATGGTCTTTCCT 896 Query 916 TCAAGACTATGCCATAAAACACATAT-GCAT----GT--GT-TT-GGATCATATTTTCAA 966 |||||||| |||| |||||||||||| | || || || || ||||||||||||||| Sbjct 897 TCAAGACTCTGCCTTAAAACACATATAGTATATATGTATGTGTTTGGATCATATTTTCAA 956 Query 967 TAATTTAAACTTACGGGTTATATACATCGTCAATATGTAATAAATGTAATTTAGATGTGT 1026 | ||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 957 TTATT-AAACCTACGGGTTATATACATCGTCTATATGTAATAAATGTAATTTAGATGTGT 1015 Query 1027 C-CACATGTTCTGTTTCTAAGAGATTCTTAGATATTTATGCTTGC 1070 ||||||||||||||||| ||||| ||||||||| ||||||||| Sbjct 1016 TTCACATGTTCTGTTTCTATGAGATCCTTAGATATATATGCTTGC 1060 > Ahg481843 jgi|Araly1|481843|fgenesh2_kg.4__903__AT2G29290.2 Length=1329 Score = 894 bits (484), Expect = 0.0 Identities = 679/773 (88%), Gaps = 14/773 (2%) Strand=Plus/Plus Query 155 AAGATGGAGTCTTGGAGGCATGACCGCTCTTGTCACTGGTGGCTCTAAAGGCATCGGGGA 214 ||||||||||||| ||| ||||| |||||||| || |||||| ||||||| |||||||| Sbjct 509 AAGATGGAGTCTTCAAGGTATGACTGCTCTTGTGACCGGTGGCACTAAAGGAATCGGGGA 568 Query 215 AGCTGTGGTGGAGGAACTAGCCATGTTGGGAGCAAAAGTCCACACGTGTGCCAGAGACGA 274 ||||||||||||||||||| | || |||||||||| ||||||||| |||||||||||||| Sbjct 569 AGCTGTGGTGGAGGAACTATCAATCTTGGGAGCAATAGTCCACACATGTGCCAGAGACGA 628 Query 275 AACTCAGCTTCAAGAACGCTTACGTGAATGGCAAGCAAAAGGGTTTCAGGTCACCACTTC 334 ||||||||||||||||| || | ||||||||||| |||||||||||||||||||||||| Sbjct 629 GACTCAGCTTCAAGAACGTTTGCTTGAATGGCAAGAAAAAGGGTTTCAGGTCACCACTTC 688 Query 335 TGTCTGCGACGTCTCTTCT-CGTGACCAACGAGTGAAACTCATGGAAACTGTTTCCTCTC 393 |||||||||||| || ||| ||||||||||||| ||||||||| ||||| |||||||||| Sbjct 689 TGTCTGCGACGTTTC-TCTGCGTGACCAACGAGAGAAACTCATCGAAACCGTTTCCTCTC 747 Query 394 TCTACCAAGGAAAACTCAACATCCTCGTCAACAATGTGGGAACGTCAATA-TTCAAGCCG 452 ||| ||||||||||||||| |||||||| ||||||| ||||||| ||| || |||||| Sbjct 748 TCTTCCAAGGAAAACTCAATATCCTCGTAAACAATGCAGGAACGTTTATACTT-AAGCCG 806 Query 453 ACCACAGAGTATACAGCAGAAGATTTCTCTTTTGTAATGGCTACAAATCTCGAGTCAGCT 512 ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| Sbjct 807 ACCACAGAGTATACAGCAGAAGAATTCTCGTTTATAATGGCTACAAATCTCGAGTCAGCT 866 Query 513 TTCCATCTCTCACAGCTTGCCCACCCATTGTTAAAAGCCTCTGGCTCAGGGAGCATCGTG 572 |||||| | |||||||| || ||||| ||||| ||||||||||||||||||||||| ||| Sbjct 867 TTCCATATTTCACAGCTAGCGCACCCTTTGTTGAAAGCCTCTGGCTCAGGGAGCATTGTG 926 Query 573 CTCATATCCTCTGCTGCTGGAGTCGTGCATGTCAATGTTGGATCCATCTATGGAGCAACC 632 ||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 927 CTCATGTCCTCAATTGCCGGAGTCGTGCATGTCAGTGTTGGATCCATCTATGGAGCAACC 986 Query 633 AAAGGAGCCATGAATCAGCTGGCTAGAAACTTAGCTTGCGAATGGGCGAGCGACAACATA 692 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 987 AAAGGAGCCATGAATCAGCTGGCTAGAAACTTAGCTTGCGAATGGGCTAGCGACAACATA 1046 Query 693 AGGACGAACTCTGTTTGTCCTTGG-TATATCACAACTCCTTTAAGTAACGATTTTTTC-G 750 || || ||| || ||||||| || || |||| ||||||||| | || ||| | || | Sbjct 1047 AGAACTAACGCTATTTGTCCAGGGGTA-ATCAAAACTCCTTTGATTAGTGATCATCTCAG 1105 Query 751 --ATGAAGAGTTTAAGAAAGAAGCGGTGCGTACG-ACACCAATGGGGCGTGTTGGAGAAG 807 || ||||| |||| |||||||| | || ||| | ||| |||||||| |||||||| | Sbjct 1106 TGATAAAGAGATTAAAAAAGAAGCAGAGCA-ACGGATACCGATGGGGCGCGTTGGAGAGG 1164 Query 808 CAAATGAAGTCTCACCGCTTGTGGCATTTCTTTGTCTTCCTTCAGCTTCTTATATTACTG 867 |||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 1165 CAAATGAAGTTTCATCGCTTGTGGCATTTCTCTGTCTTCCTGCAGCTTCTTATATTACTG 1224 Query 868 GTCAGACCATTTGCGTTGACGGCGGTGC-CACTGTTAACGGTTTTTCCT-TCA 918 ||||||||||||| ||||| || ||| | ||||||||| || || |||| ||| Sbjct 1225 GTCAGACCATTTGTGTTGATGGAGGT-CTCACTGTTAATGGCTTCTCCTATCA 1276 > Ahg481853 jgi|Araly1|481853|fgenesh2_kg.4__913__AT2G29370.1 Length=819 Score = 835 bits (452), Expect = 0.0 Identities = 686/799 (86%), Gaps = 16/799 (2%) Strand=Plus/Plus Query 123 ATGGCAAAGGA-AGGGG---GCTTGGGAGA-GAACTCAAGATGGAGTCTTGGAGGCATGA 177 |||||||| || ||||| ||||| |||| ||| | ||||||||||||| |||||||| Sbjct 1 ATGGCAAA-GAGAGGGGAAAGCTTGAGAGACAAAC-CTAGATGGAGTCTTGAAGGCATGA 58 Query 178 CCGCTCTTGTCACTGGTGGCTCTAAAGGCATCGGGGAAGCTGTGGTGGAGGAACTAGCCA 237 | |||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 59 CTGCTCTTGTTACCGGTGGCTCCAAAGGCATCGGAGAAGCTGTGGTGGAGGAACTAGCCA 118 Query 238 TGTTGGGAGCAAAAGTCCACACGTGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTAC 297 |||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 119 TGTTTGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTAC 178 Query 298 GTGAATGGCAAGCAAAAGGGTTTCAGGTCACCACTTCTGTCTGCGACGTCTCTTCTCGTG 357 ||||||||||||| |||||||| || |||||||||||||| ||||| || |||||||||| Sbjct 179 GTGAATGGCAAGCCAAAGGGTTACAAGTCACCACTTCTGTTTGCGATGTTTCTTCTCGTG 238 Query 358 ACCAACGAGTGAAACTCATGGAAACTGTTTCCTCTCTCTACCAAGGAAAACTCAACATCC 417 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 239 ACCAGCGAGTGAAACTCATGGAAACTGTTTCCTCTCTCTTCCAAGGAAAACTCAACATCC 298 Query 418 TCGTCAAC-AATGTGGGAACGTCAATATTCAAGCCGACCACAGAGTATACAGCAGAAGAT 476 |||| | | |||||||||||| | | |||||||||||||||| |||| ||||||| Sbjct 299 TCGT-ACCCAATGTGGGAACGGGTGTGGTAAAGCCGACCACAGAGTGTACATCAGAAGAG 357 Query 477 TTCTCTTTTGTAATGGCTACAAATCTCGAGTCAGCTTTCCATCTCTCACAGCTTGCCCAC 536 ||||||||| |||||||||||||||| |||||| ||||||||||||| || || || ||| Sbjct 358 TTCTCTTTTATAATGGCTACAAATCTGGAGTCAACTTTCCATCTCTCGCAACTCGCGCAC 417 Query 537 CCATTGTTAAAAGCCTCTGGCTCAGGGAGCATCGTGCTCATATCCTCTGCTGCTGGAGTC 596 || || || ||||||||||| ||||||| ||| |||||||| || || |||||||| || Sbjct 418 CCTTTATTGAAAGCCTCTGGTTCAGGGAACATTGTGCTCATGTCTTCCGCTGCTGGGGTT 477 Query 597 GTGCATGTCAATGTTGGATCCATCTATGGAGCAACCAAAGGAGCCATGAATCAGCTGGCT 656 || || | | | ||| |||||||||||||||||||||||||||||||||||||| Sbjct 478 GTAAATTTGGGTAATACATCAATCTATGGAGCAACCAAAGGAGCCATGAATCAGCTGGCG 537 Query 657 AGAAACTTAGCTTGCGAATGGGCGAGCGACAACATAAGGACGAACTCTGTTTGTCCTTGG 716 ||||| || || ||||| |||||||| || ||||||||| | |||||||||||||| ||| Sbjct 538 AGAAATTTGGCATGCGAGTGGGCGAGTGATAACATAAGGGCTAACTCTGTTTGTCCATGG 597 Query 717 TAT-ATCACAACTCCTTTAAGTAACGATTTT-TTCG--ATGAAGA-GTTTAAGAAAGAAG 771 | | ||||||||||| | |||||| |||||| || | || |||| || |||||| | | Sbjct 598 T-TCATCACAACTCCATCAAGTAAAGATTTTCTTGGTGATAAAGATGTAAAAGAAA-AGG 655 Query 772 CGGTGCGTACGACACCAATGGGGCGTGTTGGAGAAGCAAATGAAGTCTCACCGCTTGTGG 831 || | || |||||| |||||||| |||||||| ||||||||||| ||| ||||||||| Sbjct 656 TGGAGAGTGTGACACCGATGGGGCGCGTTGGAGAGGCAAATGAAGTATCATCGCTTGTGG 715 Query 832 CATTTCTTTGTCTTCCTTCAGCTTCTTATATTACTGGTCAGACCATTTGCGTTGACGGCG 891 ||||||| ||||||||| |||||||||||||||||||||| |||||||||||||| || | Sbjct 716 CATTTCTATGTCTTCCTGCAGCTTCTTATATTACTGGTCAAACCATTTGCGTTGATGGAG 775 Query 892 GTGCCACTGTTAACGGTTT 910 || |||| |||||||||| Sbjct 776 GTTTCACTATTAACGGTTT 794 > Ahg497196 jgi|Araly1|497196|fgenesh2_kg.41__4__AT2G29150.1 Length=804 Score = 789 bits (427), Expect = 0.0 Identities = 671/787 (85%), Gaps = 24/787 (3%) Strand=Plus/Plus Query 146 AGAGAACTCAAGATGGAGTCTTGGAGGCATGACCGCTCTTGTCACTGGTGGCTCTAAAGG 205 ||| || || |||||||| ||||||||||||||||||||||| || |||||||| ||||| Sbjct 27 AGACAAATCTAGATGGAGCCTTGGAGGCATGACCGCTCTTGTGACCGGTGGCTCCAAAGG 86 Query 206 CATCGGGGAAGCTGTGGTGGAGGAACTAGCCATGTTGGGAGCAAAAGTCCACACGTGTGC 265 | |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct 87 CCTCGGAGAAGCTGTGGTGGAGGAACTAGCCATGTTGGGAGCAAGAGTCCACACATGTGC 146 Query 266 CAGAGACGAAACTCAGCTTCAAGAACGCTTACGTGAATGGCAAGCAAAAGGGTTTCAGGT 325 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 147 CAGAGACGAAACTCAGCTTCAAGAACGCTTACGTGAGTGGCAAGGAAAAGGGTTTCAGGT 206 Query 326 CACCACTTCTGTCTGCGACGTCTCTTCTCGTGACCAACGAGTGAAACTCATGGAAACTGT 385 |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| || Sbjct 207 CACCACTTCTGTATGCGACGTTTCTTCTCGTGACCAACGAGAGAAACTCATGGAAACCGT 266 Query 386 TTCCTCTCTCTACCAAGGAAAACTCAACATCCTCGTCAAC-AATGTGGGAAC-G-TCAAT 442 ||||||| ||| |||||||||||||||||||||||| || |||| |||||| | | | | Sbjct 267 TTCCTCTATCTTCCAAGGAAAACTCAACATCCTCGT-AAGTAATGCGGGAACCGGT-A-T 323 Query 443 ATTCAA-GCCGACCACAGAGTATACAGCAGAAGATTTCTCTTTTGTAATGGCTACAAATC 501 | ||| |||||| || |||| ||||||| |||||| ||| ||| | ||||||||||||| Sbjct 324 AG-CAAAGCCGACTACTGAGTTTACAGCACAAGATTACTCGTTTCTGATGGCTACAAATC 382 Query 502 TCGAGTCAGCTTTCCATCTCTCACAGCTTGCCCACCCATTGTTAAAAGCCTCTGGCTCAG 561 ||||||||||||| ||| ||||||||||||| || || || |||||||| || | | || Sbjct 383 TCGAGTCAGCTTTTCATATCTCACAGCTTGCTCATCCTTTATTAAAAGCTTCAAGTTTAG 442 Query 562 GGAGCATCGTGCTCATATCCTCTGCTGCTGGAGTCGTGCATGTCAATGTTGGATCCATCT 621 ||||||||||| |||| ||||||| ||||||| | |||||| | || || |||||||| Sbjct 443 GGAGCATCGTGTTCATGTCCTCTGTTGCTGGACTTGTGCATA-C--TGGTGCATCCATCT 499 Query 622 ATGGAGCAACCAAAGGAGCCATGAATCAGCT-GGCTAGAAACTTAGCTTGCGAATGGGCG 680 |||||||||| |||||||| ||||||||||| || ||||||||||| ||||| ||||| Sbjct 500 ATGGAGCAACAAAAGGAGCTATGAATCAGCTAGGA-AGAAACTTAGCATGCGAGTGGGCA 558 Query 681 AGCGACAACATAAGGACGAACTCTGTTTGTCCTTGG-T-ATATCACAACTCCTTTAAGTA 738 || |||||||||||| |||||||| ||||| ||| | ||| || | |||||||| | Sbjct 559 AGTGACAACATAAGGGTTAACTCTGTGTGTCCATGGGTCATAGCA-A-CTCCTTTA-GCC 615 Query 739 A-CGATT-TTTTC-G--ATGAAGAGTTTAAGAAAGAAGCGGTGCGTACGACACCAATGGG 793 | | ||| ||||| | ||||||||||||| |||| || || | ||| |||||||||||| Sbjct 616 AGC-ATTATTTTCAGTGATGAAGAGTTTAAAAAAGCAGTGGAGAGTAAGACACCAATGGG 674 Query 794 GCGTGTTGGAGAAGCAAATGAAGTCTCACCGCTTGTGGCATTTCTTTGTCTTCCTTCAGC 853 ||||||||| ||||||||||||||||| ||||||| |||||||| ||| |||| |||| Sbjct 675 ACGTGTTGGAAAAGCAAATGAAGTCTCATCGCTTGTCGCATTTCTCTGTTTTCCGGCAGC 734 Query 854 TTCTTATATTACTGGTCAGACCATTTGCGTTGACGGCGGTGCCACTGTTAACGGTTTTTC 913 ||||||||| || |||||||| || || || || || |||||| | || ||||| || || Sbjct 735 TTCTTATATAACGGGTCAGACTATCTGTGTCGATGGAGGTGCCTCGGTGAACGGCTTCTC 794 Query 914 CTTCAAG 920 |||||| Sbjct 795 TTTCAAG 801 > Ahg481835 jgi|Araly1|481835|fgenesh2_kg.4__895__AT2G29150.1 Length=798 Score = 754 bits (408), Expect = 0.0 Identities = 665/788 (84%), Gaps = 21/788 (3%) Strand=Plus/Plus Query 140 CTTGGGAGAGAACTCAAGATGGAGTCTTGGAGGCATGACCGCTCTTGTCACTGGTGGCTC 199 |||| |||| || || |||||||| |||| |||||||||||||||||| || |||||||| Sbjct 21 CTTGAGAGACAAATCTAGATGGAGCCTTGAAGGCATGACCGCTCTTGTTACCGGTGGCTC 80 Query 200 TAAAGGCATCGGGGAAGCTGTGGTGGAGGAACTAGCCATGTTGGGAGCAAAAGTCCACAC 259 |||||| |||| |||||||| |||||||||||||||||||| ||||||| ||||||||| Sbjct 81 CAAAGGCCTCGGAGAAGCTGTAGTGGAGGAACTAGCCATGTTTGGAGCAAGAGTCCACAC 140 Query 260 GTGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACGTGAATGGCAAGCAAAAGGGTT 319 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 141 ATGTGCCAGAGACGAAACTCAGCTTCAAGAACGATTACGTGAATGGCAAGCAAAAGGGTT 200 Query 320 TCAGGTCACCACTTCTGTCTGCGACGTCTCTTCTCGTGACCAACGAGTGAAACTCATGGA 379 ||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||| Sbjct 201 TCAAGTCACCACTTCTGTCTGCGATGTTTCTTCTCGTGACCAACGAGAGAAACTCATGGA 260 Query 380 AACTGTTTCCTCTCTCTACCAAGGAAAACTCAACATCCTCGTCAACAATGTGGGAACGTC 439 ||| ||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||| Sbjct 261 AACCGTTGCCTCTCTCTTCCAAGGAAAACTCAACATCCTCGTAAACAATGCGGGAACGGG 320 Query 440 AATATTCAAGCCGACCACAGAGTATACAGCAGAAGATTTCTCTTTTGTA-ATGGCTACAA 498 ||| | |||||||| | ||||||||||| | |||||| ||| ||| | |||||||||| Sbjct 321 TATACTAAAGCCGACTATAGAGTATACAGAACAAGATTACTCGTTTC-AGATGGCTACAA 379 Query 499 ATCTCGAGTCAGCTTTCCATCTCTCACAGCTTGCCCACCCATTGTTAAAAGCCTCTGGCT 558 |||||||||| ||||| ||||| |||||||| || || || || |||||||| || | | Sbjct 380 ATCTCGAGTCCGCTTTTCATCTATCACAGCTCGCTCATCCTTTATTAAAAGCTTC-GAAT 438 Query 559 C-AGGGAGCATCGTGCTCATATCCTCTGCTGCTGGAGTCGTGCATGTCAATGTTGGATCC 617 ||||||||||||| |||| ||||||| ||||||| | || ||| | || | |||| Sbjct 439 TTAGGGAGCATCGTGTTCATGTCCTCTGTTGCTGGACTTGTACATACCG--GT-GCATCC 495 Query 618 ATCTATGGAGCAACCAAAGGAGCCATGAATCAGCT-GGCTAGAAACTTAGCTTGCGAATG 676 ||||||||||||||||||||||| ||||||||||| || ||| ||||||| ||||| || Sbjct 496 ATCTATGGAGCAACCAAAGGAGCTATGAATCAGCTAGGA-AGAGACTTAGCATGCGAGTG 554 Query 677 GGCGAGCGACAACATAAGGACGAACTCTGTTTGTCCTTGG-T-ATATCACAACTCCTTTA 734 ||| || |||||||||||| ||||| || ||||| ||| | ||| |||||||||||| Sbjct 555 GGCAAGTGACAACATAAGGGTTAACTCGGTGTGTCCATGGGTCATA--ACAACTCCTTTA 612 Query 735 AGTAACGATTTTTTCG--ATGAAGAGTTTAAGAAA-GAAGCGGTGCG-TACGACACCAAT 790 | || | ||| || | ||||| |||| |||||| | || || | | || ||||||||| Sbjct 613 ACTAGC--TTTATTAGTGATGAAAAGTT-AAGAAAAGCAGTGGAG-GATAAGACACCAAT 668 Query 791 GGGGCGTGTTGGAGAAGCAAATGAAGTCTCACCGCTTGTGGCATTTCTTTGTCTTCCTTC 850 ||| ||||||||||||| |||||||| ||| ||||||| |||||||||||| |||| | Sbjct 669 GGGACGTGTTGGAGAAGTGAATGAAGTATCATCGCTTGTCGCATTTCTTTGTTTTCCGGC 728 Query 851 AGCTTCTTATATTACTGGTCAGACCATTTGCGTTGACGGCGGTGCCACTGTTAACGGTTT 910 |||||||||||| ||||||||||| || ||||| ||||| |||| | | || ||||| || Sbjct 729 AGCTTCTTATATAACTGGTCAGACTATCTGCGTCGACGGAGGTGTCTCGGTGAACGGCTT 788 Query 911 TTCCTTCA 918 || |||| Sbjct 789 CTCTTTCA 796 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47310539997 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5