BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G34210.1 Length=2970 Score E Sequences producing significant alignments: (Bits) Value Ahg482364 jgi|Araly1|482364|fgenesh2_kg.4__1424__AT2G34210.1 4104 0.0 Ahg327088 jgi|Araly1|327088|fgenesh1_pm.C_scaffold_6002308 1062 0.0 > Ahg482364 jgi|Araly1|482364|fgenesh2_kg.4__1424__AT2G34210.1 Length=2937 Score = 4104 bits (2222), Expect = 0.0 Identities = 2549/2704 (94%), Gaps = 34/2704 (1%) Strand=Plus/Plus Query 290 GTTTCATTGTAAGTGGTGAAGCTGACCTTCCTAATGAGGATTCTGATCATCGTAGGCAAT 349 |||||||||||||||||||| |||||||||||| ||||||| || |||||| |||||||| Sbjct 245 GTTTCATTGTAAGTGGTGAAACTGACCTTCCTAGTGAGGATACTAATCATCATAGGCAAT 304 Query 350 ATTACCAACGGGGGTTTCATCCTCATGAAGAAGATGTCGACGAGTTGGAAAAGAGAACTT 409 |||||||||||||||| |||||||||||||||||||||||||||| || |||||||||| Sbjct 305 TTTACCAACGGGGGTTTAATCCTCATGAAGAAGATGTCGACGAGTTTGAGAAGAGAACTT 364 Query 410 TGGAAAGATTGTCTACGA-AAT--ATGCAAAGGATGATTATGAGCTTGATGATGTTAACG 466 ||||||| |||||| | | || ||||| |||||||| ||||||||||||| ||||||| Sbjct 365 TGGAAAGGTTGTCTTCTAGGATGCATGCAGAGGATGATGATGAGCTTGATGAGGTTAACG 424 Query 467 ACGTTGATCAACAAGCGCTTTTGCCATCAGTCCGTGACCCTAAACTGTGGCTGGTGAAAT 526 || |||| |||||||||||||||||||||||||| ||||| ||| ||||| |||| |||| Sbjct 425 ACATTGAGCAACAAGCGCTTTTGCCATCAGTCCGCGACCCGAAATTGTGGTTGGTCAAAT 484 Query 527 GTGCGATTGGACGTGAAAGAGAAGTTGCTGTTTGTCTTATGCAAAAAATCGTAGATAGAG 586 |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 485 GTGCGATTGGCCGTGAAAGAGAAGTTGCTGTTTGTCTTATGCAAAAAATCATAGATAGAG 544 Query 587 GATCAGAGTTCAAGATTAGATCTGCTATTGCTCTTGATCATCTTCAAAACTATGTATATA 646 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 545 GATCAGAGTTCAAGATTAGATCTGCTATTGCCCTTGATCATCTTCAAAACTATGTATACA 604 Query 647 TTGAAGCGGATATGGAAGCTCATGTGAAAGAGGCTATCAAGGGCATGCGGAATATTTATG 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 605 TTGAAGCGGATATGGAAGCTCATGTGAAAGAGGCTATCAAGGGCATGCGGAATATTTATG 664 Query 707 CTAATCAGAAGATTTTGCTTGTCCCCATAAAAGAAATGACTGCTGTTCTTTCTGTCGAGA 766 |||||||||||||||| ||||||||||||||||||||||| | |||||||||||| || | Sbjct 665 CTAATCAGAAGATTTTACTTGTCCCCATAAAAGAAATGACAGATGTTCTTTCTGTTGAAA 724 Query 767 GTAAAGCAATCGATTTATCCCGTGACT-CGTGGGTTAGAATGAAACTTGGGATATATAAG 825 |||||||||||||| |||||||||| | | |||||||||||||||||||||||||||||| Sbjct 725 GTAAAGCAATCGATCTATCCCGTGA-TACATGGGTTAGAATGAAACTTGGGATATATAAG 783 Query 826 GGTGATCTAGCTCAGGTGGTTGATGTTGATAATGTACGTAAGAGGGTCACAGTCAAGTTG 885 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 784 GGTGATCTAGCTCAGGTGGTTGATGTTGATAATGTGCGTAAGAGGGTCACAGTCAAGTTG 843 Query 886 ATCCCAAGAATTGATCTGCAGGCTCTAGCCAATAAGCTGGAAGGAACAGAGAATGTCAAG 945 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 844 ATCCCAAGAATTGATCTGCAGGCTCTAGCCAATAAGCTGGAAGGAAGAGAGAATGTCAAG 903 Query 946 AAGAAAGCTTTTGCTCCACCTCCACGTTTCATGAACATTGATGAGGCAAGGGAACTTCAC 1005 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 904 AAGAAAGCTTTTGCTCCACCTCCACGTTTCATGAACATTGATGAGGCAAGGGAACTTCAC 963 Query 1006 ATACGTGTTGAGCACCGGCGTGATCCAATGACGGGTGACTACTTTGAGAATATCGGTGGA 1065 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 964 ATACGTGTTGAGCACCGGCGTGATCCAATGACGGGTGACCCCTTTGAGAATATCGATGGT 1023 Query 1066 ATGCTTTTCAAAGATGGTTTTCTTTACAAGAAAGTATCGACGAAGTCCATTGCTGCTCAG 1125 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1024 ATGCTTTTCAAAGATGGTTTTCTTTACAAGAAAGTATCGACGAAGTCAATTGCTGCTCAG 1083 Query 1126 AATGTAACACCAACCTTCGATGAACTTGAAAGATTCAAGAGACCAAATGAAAATGGGGAG 1185 ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1084 AATATTACACCAACCTTCGATGAACTTGAAAGATTCAAGAGACCAAATGAAAATGGGGAG 1143 Query 1186 ATCGACTTCGTTGATGAGTCGACTTTATTTGCAAATAGAAAGAAGGGTCATTTCATGAAA 1245 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 1144 ATCGACTTCGTTGATCCCTCCACTTTATTTGCAAATAGAAAGAAGGGTCATTTCATGAAA 1203 Query 1246 GGTGATGCGGTTATTGTGATCAAGGGGGATCTTAAAAACTTGAAGGGCTGGATTGAGAAA 1305 ||||||||||||||||| |||||||||||||||| |||||| ||||| |||||||||||| Sbjct 1204 GGTGATGCGGTTATTGTTATCAAGGGGGATCTTATAAACTTAAAGGGTTGGATTGAGAAA 1263 Query 1306 GTAGATGAAGAGAATGTCCTTATCAGATCAG-AGATGAAAGATCTTCCTAATCCTATTGC 1364 ||||||||||||||||| ||||||||||| | | ||||||| |||||||||||||||||| Sbjct 1264 GTAGATGAAGAGAATGTTCTTATCAGATC-GAATATGAAAGGTCTTCCTAATCCTATTGC 1322 Query 1365 GGTTAATGGGAGAGAGCTTTGTAAATACTTTGAACCTGGAAATTTTGTGAAGGTTGTGTC 1424 ||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1323 GGTAAATGAGAGAGAGCTTTGCAAATACTTTGAACCTGGAAATTTTGTGAAGGTTGTGTC 1382 Query 1425 TGGCATCCATGAAGGAGGAACTGGCATGATTGTCAAAGTTGATCAGCATATGCTTATCAT 1484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1383 TGGCATCCATGAAGGAGGAACTGGCATGATTGTCAAAGTTGATCAGCATATGCTTATCAT 1442 Query 1485 TCTGTCTGATACAACCAAAGAACATATTTGCGTCTTCGCTGATCATGTTGCCAAGAGTGC 1544 |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct 1443 TCTGTCTGATACAACCAAAGAACATATTCGCGTCTTCGCTGATCATGTCGCCAAGAGTGC 1502 Query 1545 AGAAGTGACTAAAGGTGTCACAAAAATTGGGGACTATGAACTTCATGATCTTGTGATTCT 1604 |||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1503 AGAAGTGACTAATGCTGTCACAAAAATTGGAGACTATGAACTTCATGATCTTGTGATTCT 1562 Query 1605 AAGTGACTTTAGCTTTGGAGTAATCCTAAAACTTGATAGTGAAGCTATCCAGATTCTTAA 1664 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1563 AAGTGACTTGAGCTTTGGAGTAATCATAAAACTTGATAGTGAAGCTATCCAGATTCTTAA 1622 Query 1665 AGGGGTTCCTGACAGCTCAGAGGTCTCTATTGTCAAAGCCAGCGAAATAAAATACAAAAT 1724 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1623 AGGGGTTCCTGACAGCTCAGAGGTCTCTATTGTCAAAGCCAGCGAAATAAAATACAAAAT 1682 Query 1725 TTGGAAGAAAATCAATGTGCAAGACCGTTACAAAAATGTCGTCGCGGTGAAAGATGTTGT 1784 ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1683 TTGGAAGAAAAGCAATGTTCAAGACCGTTACAAAAATGTCATCGCGGTGAAAGATGTTGT 1742 Query 1785 CAGGGTCATTGAGGGTCCTAGCAAAGGTAAACAAGGTCCAGTGGTGCAAATCTACAAAGG 1844 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1743 CAGGGTCATTGAGGGTCCTAGCAAAGGTAAACAAGGTCCAGTGGTGCAAATCTACAAAGG 1802 Query 1845 AGTGTTGTTTATACATGACCGGCATAACCTTGAACACACTGGATTTATCTGCACTAGATG 1904 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1803 AGTGTTGTTTATACATGACCGGCATAACTTTGAACACACTGGATTTATCTGCACTAGATG 1862 Query 1905 CTCATCTTGTGTTCTTGCTGGTGGCAATTTCAAGACACCAGCCCTGGTTCCTCCATCTCC 1964 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 1863 CTCATCTTGTGTTCTTGTTGGTGGCAATTTCAAGACACCAGCCCTGATTCCTCCATCTCC 1922 Query 1965 AAGGAGATTCCAACGGGCAGACATGGGATATAACCCTGGAGCTGGAGGGAGACATCAG-G 2023 ||| ||||| ||||||||||||||||||||||||| | |||||||||||||||| | | Sbjct 1923 AAGAAGATTTCAACGGGCAGACATGGGATATAACC--G-AGCTGGAGGGAGACATT-GTG 1978 Query 2024 GTGGACGAGGGAGAAGGGGTGACGATCATTTGGTAGGTACTTATGTCAAAATTCGTCTGG 2083 ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| Sbjct 1979 GTGGACGAGGGAGAAGGGGTGACGATCTTTTGGTAGGTACTTATGTGAAAATTCGTATGG 2038 Query 2084 GGCCTTTCAAGGGATATAGTGGGCGTTTAGTTGAAGTCAAAGATAAGCTAGTGCGTGTGG 2143 || |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 2039 GGGCTTTCAAGGGATATAGCGGGCGTTTAGTTGAAGTCAAAGATAAGTTAGTGCGTGTGG 2098 Query 2144 AACTTGAGGCCAAGATTGTGACAG------T----T--GAGCGGAAGGCGATATCAGATA 2191 |||| ||||||||||||||||||| | | |||||||||||||||||||||| Sbjct 2099 AACTCGAGGCCAAGATTGTGACAGGCAAGCTCCACTTTGAGCGGAAGGCGATATCAGATA 2158 Query 2192 TGACTGATAATGTAGTCGCAACCC-CGCAGTATAATATGGGAAGCCAAACTCCTATGCAT 2250 ||||||||||||||| | || || | || |||||||||||||||||||||||||||||| Sbjct 2159 TGACTGATAATGTAGCCACA-CCTTCTCATTATAATATGGGAAGCCAAACTCCTATGCAT 2217 Query 2251 CCTTCCCGGACTCCACTTCATCCCTGTATGACTCCAATGCGGCATTCTGGAGCTACACCT 2310 ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| Sbjct 2218 CCTTCCCGGACTCCACTTCATCCTTGTATGACTCCGATGCGGGATTCTGGAGCTACACCT 2277 Query 2311 ATCCATGATGGAATGAGGACACCTATGCGTGGTAGAGCTTGGAATCCTTACATGCCTATG 2370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2278 ATCCATGATGGAATGAGGACACCTATGCGTGGTAGAGCTTGGAATCCTTACATGCCGATG 2337 Query 2371 AGTCCTCCTAGGGATAACTGGGAAGATGGGAACCCGGGATCATGGGGAACAAGTCCATAT 2430 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct 2338 AGTCCTCCTAGGGATAACTGGGAAGATGGAAACCCGGGATCATGGGGAACAGGTCCATAT 2397 Query 2431 GAAGCAGCTACGCCTGGATCAG-ATTGGGGTAGTAGTACTCCTGGTCGTAGTAGTTACAG 2489 |||||| ||||||||||||||| || ||||||||||||||||| || ||||||||||||| Sbjct 2398 GAAGCATCTACGCCTGGATCAGGAT-GGGGTAGTAGTACTCCTAGTTGTAGTAGTTACAG 2456 Query 2490 AGATGCCGGAACACCAATAAACAATGCTAATGCCCCAAGTCCTATGACACCAAGCTCAAC 2549 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2457 TGATGCTGGAACACCAATAAACAATGCTAATGCCCCAAGTCCTATGACACCAAGCTCAGC 2516 Query 2550 TTCCTACTTACCTACCACACCCGGAGGACAAGCAATGACTCCTGGAACCGATCTCGATGT 2609 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2517 TTCCTACCTACCTACCACACCCGGAGGACAACCAATGACTCCTGGAACCGATCTCGATGT 2576 Query 2610 CATGTCTCTTGATATAGGTGGAGATGCAGAAACCAGGTTCATACCCGGTATATTGGTCAA 2669 |||||||| |||| ||||||||||||||||||| ||||| | || ||||| |||||||| Sbjct 2577 CATGTCTCATGATTTAGGTGGAGATGCAGAAACAAGGTTTGTGCCTGGTATTTTGGTCAA 2636 Query 2670 TGTACACAAAGCTGGAGAGGATAG-AAATCCCGGTGTTATTCGAGATGTTCTTCCGGATG 2728 ||||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||| Sbjct 2637 CGTACACAAAGCTGGAGAGGATAGTAAA-CCCGGTGTCATCCGAGATGTTCTTCCGGATG 2695 Query 2729 GCTCCTGTGTAGTCGCACTTGGACACAGAGGTGAAGGCGAGACGATAA-GAGCGACACAG 2787 |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||| Sbjct 2696 GCTCATGTGTAGTCGCACTTGGACACAGAGGTGAAGGCGGGACGATAATG-GCGACACAG 2754 Query 2788 AACAAAGTGAGCCTAGTTTGTCCGAAGAAGAACGAACGTGTGAAGATTCTTGGAGGCAAG 2847 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2755 AACAAAGTGAGCCTAGTTTGTCCAAAGAAGAACGAACGTGTGAAGATTCTTGGAGGCAAG 2814 Query 2848 TATTGTGGTTCAACAGCTAAGGTCATTGGTGAGGACGG-TCAGGACGGTATAGTTAAGCT 2906 ||| |||||||||||| ||||||||||||||| ||||| | |||| ||||||||||||| Sbjct 2815 TATGGTGGTTCAACAGGTAAGGTCATTGGTGAAGACGGATG-GGACAGTATAGTTAAGCT 2873 Query 2907 AGATGAAAGTCTCGATATCAAGATATTGAAGCTGACTATATTAGCCAAGTTAGTTCATGA 2966 |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| Sbjct 2874 AGATGAAAGTCTCGATGTCAAGATAATGAAGCTGGCTATATTAGCCAAGTTAGTTCATGA 2933 Query 2967 GTGA 2970 |||| Sbjct 2934 GTGA 2937 Score = 315 bits (170), Expect = 2e-84 Identities = 207/225 (92%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 32 ATGAAGATGACTCGGAGATGGAGGATGAGGACGAAGAAGACGAATATGAACCCAGAAGTA 91 |||| ||||| |||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct 23 ATGAGGATGATTCGGAGATGGAGGAGGAGGAGGACGAAGACGAATATGAGCCGAGAAGTA 82 Query 92 GCCGCAAAGGAAGATCAGGGAAGAAAAGGGGAAGATCAAATTCAGATTCCGATGGTCGGC 151 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83 GCCGCAAAGGTAGCTCAGGGAAGAAAAGGGGAAGATCAAATTCAGATTCCGATGGTCGGC 142 Query 152 GAGGGAGTAAAAAGAAGTCTTCGGGCTCCGCCTTCATTGACTGGGAGGTTGAGGTAGATG 211 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 143 GAGGGAGTAAAAAGAAGTCTTCGGGTTCCGCCTTCATTGACTGGGAGGTTGAGGTGGATG 202 Query 212 ACGACGTCGAAGACGACGATGATGATGTGGACGTTGA-AGACGGT 255 ||||||| ||||||||||| |||||||| || | ||| | ||||| Sbjct 203 ACGACGTAGAAGACGACGACGATGATGTTGAAGATGATA-ACGGT 246 > Ahg327088 jgi|Araly1|327088|fgenesh1_pm.C_scaffold_6002308 Length=3156 Score = 1062 bits (575), Expect = 0.0 Identities = 868/1010 (86%), Gaps = 18/1010 (2%) Strand=Plus/Plus Query 469 GTTGATCAACAAGCGCTTTTGCCATCAGTCCGTGACCCTAAACTGTGGCTGGTGAAATGT 528 ||||| ||||||||||||||||||||||| || ||||| ||| ||||| ||||||||||| Sbjct 499 GTTGAGCAACAAGCGCTTTTGCCATCAGTTCGCGACCCGAAATTGTGGATGGTGAAATGT 558 Query 529 GCGATTGGACGTGAAAGAGAAGTTGCTGTTTGTCTTATGCAAAAAATCGTAGATAGAGGA 588 |||||||| || ||||| || |||||||||||||||||||||||| | ||||| ||||| Sbjct 559 GCGATTGGTCGCGAAAGGGAGGTTGCTGTTTGTCTTATGCAAAAATTTATAGATCGAGGA 618 Query 589 TCAGAGTT-CAAGATTAGATCTGCTATTGCTCTTGATCATCTTCAA-AACTATGTATATA 646 | || || || ||||||||||| | |||| ||||| |||||| || || ||| ||||| Sbjct 619 GCTGATTTGCA-GATTAGATCTGTTGTTGCCCTTGACCATCTT-AAGAATTATATATATG 676 Query 647 TTGAAGCGGATATGGAAGCTCATGTGAAAGAGGCTATCAAGGGCATGCGGAATATTTATG 706 ||||||| || | ||||||||||||||||||||| |||||||||||| ||||||| |||| Sbjct 677 TTGAAGCAGACAAGGAAGCTCATGTGAAAGAGGCAATCAAGGGCATGAGGAATATATATG 736 Query 707 CTAATCAGAAGATTTTGCTTGTCCCCATAAAAGAAATGACTGCTGTTCTTTCTGTCGAGA 766 ||||||||||||| || |||||||| |||| ||||||||| | ||| |||||||| || | Sbjct 737 CTAATCAGAAGATCTTACTTGTCCCGATAAGAGAAATGACAGATGTGCTTTCTGTTGAAA 796 Query 767 GTAAAGCAATCGATTTATCCCGTGACT-CGTGGGTTAGAATGAAACTTGGGATATATAAG 825 | |||||||| ||| |||| || || | | ||||||||||||||| | |||| ||||| Sbjct 797 GCAAAGCAATTGATCTATCTCGGGA-TACCTGGGTTAGAATGAAAATCGGGACGTATAAA 855 Query 826 GGTGATCTAGCTCAGGTGGTTGATGTTGATAATGTACGTAAGAGGGTCACAGTCAAGTTG 885 |||||||| || |||| ||||| ||||||||||| ||| ||||||||||||||||||| Sbjct 856 GGTGATCTTGCAAAGGTAGTTGACGTTGATAATGTGCGTCAGAGGGTCACAGTCAAGTTA 915 Query 886 ATCCCAAGAATTGATCTGCAGGCTCTAGCCAATAAGCTGGAAGGAACAGAGAA-TGTCAA 944 ||||||||||||||||||||||| ||||||| ||||||||| |||| ||||| | |||| Sbjct 916 ATCCCAAGAATTGATCTGCAGGCACTAGCCAGTAAGCTGGACGGAA--GAGAAGTTTCAA 973 Query 945 -GAAGAAAGCTTTTGCTCCACCTCCACGTTTCATGAACATTGATGAGGCAAGGGAACTT- 1002 ||| ||||| |||| |||||||||||||||||||||||||||||| ||||||||| || Sbjct 974 AGAAAAAAGCCTTTGTTCCACCTCCACGTTTCATGAACATTGATGAAGCAAGGGAA-TTG 1032 Query 1003 CACATACGTGTTGAGCACCGGCGTGATCCAATGACGGGTGACTACTTTGAGAATATCGGT 1062 |||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct 1033 CACATACGTGTTGAGCGTCGGCGTGATCCCATGACGGGTGATTACTTTGAAAATATTGGT 1092 Query 1063 GGAATGCTTTTCAAAGATGGTTTTCTTTACAAGAA-AGTATCGAC-GAAGTCCATTGCTG 1120 || ||||||||||||||||||||| | ||||| || |||||| | ||||||||| ||| Sbjct 1093 GGCATGCTTTTCAAAGATGGTTTTATGTACAA-AACAGTATC-ATTGAAGTCCATCACTG 1150 Query 1121 CTCAGAATGTAACACCAACCTTCGATGAACTTGAAAGATTCAAGAGACCAAATGAAAATG 1180 ||||||||| |||||||| || || |||||||||| |||||| | ||||| |||||||| Sbjct 1151 TTCAGAATGTTACACCAACTTTTGACGAACTTGAAAAATTCAATAAACCAAGTGAAAATG 1210 Query 1181 GGGAGATCGACTTCGTTGATGAGTCGACTTTATTTGCAAATAGAAAGAA-GGGTCATTTC 1239 | ||| ||| || | || | ||| |||||||||||||| |||||||| ||| |||||| Sbjct 1211 GAGAGGGCGATTTTGGTGGTCTGTCAACTTTATTTGCAAACAGAAAGAAAGGG-CATTTC 1269 Query 1240 ATGAAAGGTGATGCGGTTATTGTGATCAAGGGGGATCTTAAAAACTTGAAGGGCTGGATT 1299 ||||| |||||||| |||||||| || ||||||||||| |||||||||||||| ||| || Sbjct 1270 ATGAAGGGTGATGCAGTTATTGTTATAAAGGGGGATCTGAAAAACTTGAAGGGTTGGGTT 1329 Query 1300 GAGAAAGTAGATGAAGAGAATGTCCTTATCAGATCAGAGATGAAAGATCTTCCTAATCCT 1359 ||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||| ||||| Sbjct 1330 GAGAAAGTAGATGAAGAAAATGTCCTTATCAGATCAGAAATGAAAGGTCTCCCTGATCCT 1389 Query 1360 ATTGCGGTTAATGGGAGAGAGCTTTGTAAATACTTTGAACCTGGAAATTTTGTGAAGGTT 1419 |||| || |||| |||||||||||| || |||||||||||||||||| |||||||||| Sbjct 1390 CTTGCTGTAAATGAGAGAGAGCTTTGCAAGTACTTTGAACCTGGAAATCATGTGAAGGTT 1449 Query 1420 GTGTCTGGCATCCATGAAGGAGGAACTGGCATGATTGTCAAAGTTGATCA 1469 || ||||| | ||||||||||| ||| |||||| |||||||||||||||| Sbjct 1450 GTTTCTGGGACCCATGAAGGAGCAACAGGCATGGTTGTCAAAGTTGATCA 1499 Score = 370 bits (200), Expect = 3e-101 Identities = 345/414 (83%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 1522 GCTGATCATGTTGCCAAGAG-TGCAGAAGTGACTAA-AGGTGTCACAAAAATTGGGGACT 1579 ||||||||||||| |||| | |||||||||| || ||||| || ||||||||||||| Sbjct 1516 GCTGATCATGTTGTTGAGAGCT-CAGAAGTGAC-AACTGGTGTTACCAAAATTGGGGACT 1573 Query 1580 ATGAACTTCATGATCTTGTGATTCTA-AGTGACTTTAGCTTTGGAGTAATCCTAAAACTT 1638 |||||||||||||||||||| |||| | | || | |||||||||||||| || ||| Sbjct 1574 ATGAACTTCATGATCTTGTGCTTCTGGA-TAACCTGAGCTTTGGAGTAATTATACGACTA 1632 Query 1639 GATAGTGAAGCTATCCAGATTCTTAAAGGGGTTCCTGACAG-CTCAGAGGTCT-CTATTG 1696 || | ||||||| | ||| |||||||||||||||||||||| | ||||||| | || ||| Sbjct 1633 GAGAATGAAGCTTTTCAGGTTCTTAAAGGGGTTCCTGACAGAC-CAGAGGT-TGCTCTTG 1690 Query 1697 TCAAAGC-CAGCGAAATAAAATACAAAATTTG-GAAGAAAATCAATGTGCAAGACCGTTA 1754 ||||| | ||| ||||| |||| ||||||| | ||||||||||||||| ||||| || || Sbjct 1691 TCAAA-CTCAGAGAAATCAAATGCAAAATT-GAGAAGAAAATCAATGTTCAAGATCGCTA 1748 Query 1755 CAAAAATGTCGTCGCGGTGAAAGATGTTGTCAGGGTCATTGAGGGTCCTAGCAAAGGTAA 1814 |||||||||| | || |||||||||| ||||| ||||| |||||||||||||||||||| Sbjct 1749 CAAAAATGTCATTGCTGTGAAAGATGACGTCAGAGTCATCGAGGGTCCTAGCAAAGGTAA 1808 Query 1815 ACAAGGTCCAGTGGTGCAAATCTACAAAGGAGTGTTGTTTATACATGACCGGCATAACCT 1874 ||||||||| ||| ||| |||||||||||||| || |||||| |||| |||||| |||| Sbjct 1809 ACAAGGTCCGGTGAAGCATATCTACAAAGGAGTCTTATTTATATATGATCGGCATCACCT 1868 Query 1875 TGAACACACTGGATTTATCTGCACTAGATGCTCATCTTGTGTTCTTGCTGGTGG 1928 ||| || |||||||||||||| ||| |||| |||| || || ||| |||||| Sbjct 1869 TGAGCATGCTGGATTTATCTGCGCTAAATGCACATCATGCATTGTTGTTGGTGG 1922 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 112137681280 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5