BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G35155.1 Length=2263 Score E Sequences producing significant alignments: (Bits) Value Ahg934124 jgi|Araly1|934124|scaffold_402112.1 2994 0.0 Ahg948569 jgi|Araly1|948569|scaffold_800456.1 675 0.0 Ahg948543 jgi|Araly1|948543|scaffold_800430.1 608 5e-173 > Ahg934124 jgi|Araly1|934124|scaffold_402112.1 Length=1774 Score = 2994 bits (1621), Expect = 0.0 Identities = 1730/1782 (97%), Gaps = 10/1782 (1%) Strand=Plus/Plus Query 289 AAGTAGCATTGTAAAAGGAGATGAATTTGGGAGCTTGGGGTCAGAGATTCATCCAAGCAG 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AAGTAGCATTGTAAAAGGAGATGAATTTGGGAGCTTGGGGTCAGAGATTCATCCAAGCAG 60 Query 349 CAGCTTCTTCTGAATCGGAGGATTCTGCTTTGGATTTGGAGAGAAATCATCACTGCAATC 408 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CAGCTTCTTCTGAATCCGAGGATTCTGCTTTGGATTTGGAGAGAAATCATCACTGCAATC 120 Query 409 ACTTGAGTCTTCCATCATCTTCAAGTCCATCTCCTCTTCAGCCATTCACACTCAACATCC 468 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 121 ACTTGAGTCTTCCGTCATCTTCAACTCCATCTCCTCTTCAGCCATTCACACTCAACATCC 180 Query 469 AACATGCTGAGAGCAATGCCCCTTACTTCTCCTGGCCTACGCTCAGCAGGCTTAACGACA 528 ||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct 181 AACATGCAGAGAGCAATGCCCCTTACTTCTCGTGGCCTACTCTCAGTAGGCTTAACGATG 240 Query 529 CTGTTGAAGACCGAGCTAACTACTTTGGTAATCTCCAGAAAGGGGTTTTACCAGAAACTG 588 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 241 CTGTTGAAGACCGAGCTAACTACTTTGGTAATCTTCAGAAAGGGGTTTTACCAGAAACTG 300 Query 589 TTGGCAGGTTGCCATCAGGACAACAAGCCACTACTTTGCTTGAGCTCATGACCATCAGAG 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TTGGCAGGTTGCCATCAGGACAACAAGCCACTACTTTGCTTGAGCTCATGACCATCAGAG 360 Query 649 CGTTTCATAGTAAAATCCTGCGCCGCTTCAGCCTTGGTACTGCGGTTGGGTTTCGGATCA 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CGTTTCATAGTAAAATCCTGCGCCGCTTCAGCCTTGGTACTGCGGTTGGGTTTCGGATCA 420 Query 709 GCCGTGGTGTTCTAACGAATGTTCCAGCGATACTTGTCTTTGTTGCTAGGAAAGTCCATA 768 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 421 GCCGTGGTGTTCTAACGAATGTTCCAGCAATACTTGTCTTTGTTGCTAGGAAAGTCCATA 480 Query 769 GGCAATGGCTAAATCCAATGCAGTGCCTTCCTTCTGCCCTTGAGGGTCCTGGAGGGGTAT 828 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 481 GGCAATGGCTAAATCCAATGCAGTGCCTTCCTTCTGCCCTTGAGGGCCCTGGAGGGGTAT 540 Query 829 GGTGCGATGTAGATGTTGTGGAATTCCAATACTACGGTGCTCCTGCTGCAACACCAAAGG 888 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 541 GGTGCGATGTCGATGTTGTGGAATTCCAATATTACGGTGCTCCTGCTGCAACACCAAAGG 600 Query 889 AACAAGTTTATAATGAACTTGTAGATGGTTTGAGAGGAAGTGATCCCTGCATTGGCTCTG 948 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AACAAGTTTATAATGAACTTGTAGATGGTTTGAGAGGAAGTGATCCCTGCATTGGCTCTG 660 Query 949 GTTCTCAGGTTGCAAGCCAAGAAACATATGGAACCTTGGGAGCTATAGTGAAAAGCAGAA 1008 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 661 GTTCTCAGGTTGCAAGCCAAGAAACGTATGGAACCTTGGGAGCCATAGTGAAAAGCAGAA 720 Query 1009 CAGGTAACCACCAGGTTGG-TTTCCTTACCAATCGGCATGTCGCAGTTGATTTGGATTAT 1067 |||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 721 CAGGTAACCATCAGGTTGGATTTC-TTACCAATCGGCATGTCGCAGTTGATTTGGATTAT 779 Query 1068 CCAAGCCAGAAAATGTTTCATCCTTTACCTCCAAGCCTTGGACCGGGTGTCTACCTCGGT 1127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 CCAAGCCAGAAAATGTTTCATCCTTTACCTCCAAGCCTTGGACCGGGTGTCTACCTCGGT 839 Query 1128 GCAGTTGAGAGAGCAACATCGTTTATCACAGATGATCAGTGGTATGGCATATTTGCTGGC 1187 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 840 GCAGTTGAGAGAGCAACATCGTTTATCACAGATGATCAGTGGTACGGCATATTTGCTGGC 899 Query 1188 ACAAATCCAGAAACGTTTGTGAGAGCGGATGGTGCCTTTATTCCTTTTGCAGAAGATTTC 1247 |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 900 ACAAATCCAGAAACATTTGTAAGAGCGGACGGTGCCTTTATTCCTTTTGCAGAAGATTTC 959 Query 1248 AACACGAGCAATGTAACTAC-GTTGATAAAGGGCATTGGTGAGATAGGAGATGTGCACGT 1306 |||||||||||||||||||| || |||||||||||||||||| |||||| |||| ||||| Sbjct 960 AACACGAGCAATGTAACTACCGT-GATAAAGGGCATTGGTGAAATAGGAAATGTACACGT 1018 Query 1307 TATAGACTTGCAATCCCCAATTGATAGCCTTATTGGGAAACAAGTTGTCAAAGTTGGAAG 1366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1019 TATAGACTTGCAATCCCCAATTGATAGCCTTATTGGGAAACAAGTTGTCAAAGTTGGAAG 1078 Query 1367 AAGCTCTGGATATACCACCGGAACCATAATGGCTTATGCATTGGAATACAACGACGAGAA 1426 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1079 AAGCTCTGGATATACCACCGGAACCATAATGGCTTATGCTTTGGAATACAACGACGAGAA 1138 Query 1427 AGGGATCTGTTTCCTCACGGATTTTCTGGTCATTGGTGAAAACCAGCAAACTTTTGACCT 1486 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1139 AGGGATCTGTTTCCTCACGGATTTTCTGGTCATTGGCGAAAACCAGCAAACTTTTGACCT 1198 Query 1487 TGAAGGTGACAGTGGAAGCCTAATACTCTTAACGGGTCCAAATGGTCAGAAGCCACGACC 1546 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1199 TGAAGGTGACAGTGGAAGCCTAATACTCTTAACGGGTCCAAATGGTCAGAAGCCAAGACC 1258 Query 1547 AGTTGGGATCATTTGGGGAGGAACAGCCAACCGAGGAAGACTTAAACTAATAGCCGGTCA 1606 ||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||| Sbjct 1259 AGTTGGGATCATTTGGGGAGGGACAGCCAACCGCGGAAGACTTAAACTCATAGCTGGTCA 1318 Query 1607 AGAACCCGAGAACTGGACAAGCGGAGTTGATCTTGGTCGCCTTTTGGATCTCTTGGAGCT 1666 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1319 AGAACCCGAGAACTGGACAAGCGGAGTTGATCTTGGTCGCCTTTTGGATCTCTTGGAGCT 1378 Query 1667 TGATCTCATCACATCCAACCATGAACTTGAAGCAGCAGCAGCAGCACGAGAAGAAAGAAA 1726 ||||||||||||||| |||||||| ||||||||||||||| | | | || | ||||||| Sbjct 1379 TGATCTCATCACATCAAACCATGAGCTTGAAGCAGCAGCA-C-G-A-GA-AC-AAAGAAA 1432 Query 1727 CACTTCGGTTACAGCCCTTGATTCAACCGTTAGCCAGTCATCCCCGCCTGACCCGGTTCC 1786 |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct 1433 CACTTCGGTTACAGCCCTCGATTCAACGGTTAGCCAGTCATCCCCGCCGGACCCGGTTCC 1492 Query 1787 ATCAGGAGACAAACAAGATGAGAGCTTTGAGCCATTTATTCCGCCTGAGTTCCATATAGA 1846 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1493 ATCAGGAGACAAACAAGATGAGAGCTTTGAGCCATTTATTCCGCCTGAGTTTCATATAGA 1552 Query 1847 AGAAGCAATCAAACCAACACTTGAAGTTGAGGAACATATCTTCATTGCTCCTATATCGGT 1906 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 1553 AGAAGCAATCAAACCAACACCTGAAGTAGAGGAACATATCTTCATTGCTCCTATATCGGT 1612 Query 1907 TAACGAGTCTACTTCCGCCATTAAAGGGCAAGAGATACCCAAATTGGATAATCTCATGGC 1966 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1613 TAACGAGTCTACTTCCGCCATTAAAGGGCAAGAGAAACCCAAATTGGATAATCTCATGGC 1672 Query 1967 TTTAAAGAACAGTTCCGAAGAAGAGGTTAACATATCGTTGCATCTAGGTGAGCCCAAACT 2026 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1673 TTTAAAGAACAGTTCCGAAGAAGAGGTTAACGTATCGTTGCATCTAGGTGAGCCCAAACT 1732 Query 2027 AAAGAAGCCAAAGtttttttAGCTGAACCAGGAAATTGATCT 2068 |||||||||||||||||||||||||||||||||||||||||| Sbjct 1733 AAAGAAGCCAAAGTTTTTTTAGCTGAACCAGGAAATTGATCT 1774 > Ahg948569 jgi|Araly1|948569|scaffold_800456.1 Length=1886 Score = 675 bits (365), Expect = 0.0 Identities = 919/1182 (78%), Gaps = 56/1182 (5%) Strand=Plus/Plus Query 534 GAAGACCGAGCTAACTACTTTGGTAATCTCCAGAAAGGGGTTTTACCAGAAACTGTTGGC 593 |||||| |||| ||||| |||| ||||| |||||||| ||||| || |||||| || | Sbjct 246 GAAGACAGAGCAAACTATTTTGCAAATCTTCAGAAAGGTGTTTTGCCTGAAACT-TTTG- 303 Query 594 A-GG-TTGCCAT-CA-GGACA-ACAAGCCACTACTTTGCTTGAGCTCATGACCATCAGAG 648 | || || || | || ||| | | |||| ||||| |||||||| | |||| || |||| Sbjct 304 ATGGTTTACC-TACAGGGA-AGA-AAGCTACTACGTTGCTTGAATTGATGATGATTAGAG 360 Query 649 CGTTTCATAGTAA-AATCCTGCGCCGCTTCAGCCTTGGTACTGCGGTTGGGTTTCGGATC 707 | ||||||||||| ||| | | | || || || ||||| || |||| |||||||| Sbjct 361 CTTTTCATAGTAAGAAT-TTAAGGAGGTTTAGTCTCGGTACAGCTATTGGATTTCGGATT 419 Query 708 AGCCGTGGTGTTCTAACGAATGTTCCAGCGATACTTGTCTTTGTTGCTAGGAAAGTCCAT 767 || || || ||| | || ||| | | || || ||||| ||||||||| ||||||| || Sbjct 420 AGACGAGGCGTTTTGACAAATATAGCGGCTATTCTTGTTTTTGTTGCTCGGAAAGTTCAC 479 Query 768 AGGCAATGGCTAAATCCAATGCAGTGCCTT-CCTTCTGCCCTT-GAGGGTCCTGGAGGGG 825 | ||||||||| ||||| | ||||| || ||| | | |||| |||||||||||||| | Sbjct 480 AAGCAATGGCTTAATCCTCTTCAGTG-TTTACCTACAG-CCTTGGAGGGTCCTGGAGGAG 537 Query 826 TATGGTGCGATGTAGATGTTGTGGAATTCCAATACTACGGTGCTCCTGCTGC-AAC-ACC 883 | ||||| |||||||||||||| || || ||||| || ||||| ||||| || ||| || Sbjct 538 TTTGGTGTGATGTAGATGTTGTTGAGTTTCAATATTATGGTGCACCTGC-GCAAACGCCC 596 Query 884 AAAGGAACAAGTTTATA-ATGAACTTGTAGATGGTTTGAGAGGAAGTGATCCCTGCATTG 942 ||| || || || |||| | || ||||| |||| | ||||||| |||| | | | ||| | Sbjct 597 AAA-GAGCAGGTGTATACA-GAGCTTGTTGATGATCTGAGAGGCAGTGGTTCGTCCATCG 654 Query 943 GCTCTGGTTCTCAGGTTGCAAGCCAAGAAACATATGGAACCTTGGGAGCTATAGTGAAA- 1001 | |||||||| ||||| || |||||||| ||||||||||||||||||||||| || ||| Sbjct 655 GATCTGGTTCACAGGTGGCTAGCCAAGAGACATATGGAACCTTGGGAGCTATTGT-AAAG 713 Query 1002 AGCAGAACAGGTAACCA-CCAGGTTGGTTTCCTTACCAATCGGCATGTCGCAGTTGATTT 1060 || | ||| || || || || ||||| |||||||| || || ||||| ||||||||||| Sbjct 714 AGTAAAACCGG-AATCAGACAAGTTGGCTTCCTTACAAACCGTCATGTTGCAGTTGATTT 772 Query 1061 GGATTATCCAAGCCAGAAAATGTTTCATCCTTTACCTCCAAGCCTTGGACCGGGTGTCTA 1120 || || ||||||||||| |||||||||||||| || || ||||| ||||| || ||||| Sbjct 773 AGACTACCCAAGCCAGAAGATGTTTCATCCTTTGCCACCTAGCCTCGGACCCGGAGTCTA 832 Query 1121 CCTCGGTGCAGTTGAGAGAGCAACATCGTTTATCACAGATGATCAGTGGTATGGCATATT 1180 | | |||||||| || |||||||| || || || || ||||| | ||||||||||| || Sbjct 833 CTTAGGTGCAGTGGAAAGAGCAACTTCATTCATTACCGATGACCTTTGGTATGGCAT-TT 891 Query 1181 T-GCTGGCACAAATCCAGAAACGTTTGTGAGAGCGGATGGTGCCTTTATTCCTTTTGCAG 1239 | ||||| || || |||||||| ||||| |||| ||||| ||||| || || ||||| | Sbjct 892 TCGCTGGAACTAACCCAGAAACATTTGTTCGAGCTGATGGAGCCTTCATACCATTTGCGG 951 Query 1240 AAGATTTCAACACGAGCAATGTAACTAC-GTTGAT-AAAGGGCATTGGTGAGATAGG-AG 1296 | || ||||||| || |||||||| || || | ||| || ||||||||||| || | Sbjct 952 AGGACTTCAACATGAATAATGTAACCACAACTG-TCAAA-GGTATTGGTGAGATCGGTA- 1008 Query 1297 ATGTGCACGTTA-TAGACT-TGCAATCCCCAATTGATAGCCTTATTGGGAA--ACAAGTT 1352 || | || | || | || | | || || ||||| | || | || | |||| | ||||| Sbjct 1009 ATATCCATGCTACT-GA-TCTACAGTCACCAATCAACAGTC-TAATAGGAAGGA-AAGTT 1064 Query 1353 GTCAAAGTTGGAAGAAGCTCTGGATAT-ACCACCGGAACCATAATGGCTTATGCATTGGA 1411 ||||||||||||||||||||||| | | ||||| || ||||||||||| ||||| ||||| Sbjct 1065 GTCAAAGTTGGAAGAAGCTCTGGTT-TGACCACTGGGACCATAATGGCATATGCGTTGGA 1123 Query 1412 ATACAACGACGAGAAAGGGATCTGTTTCCTCACGGATTTTCTGGTCATTGGTGAAAACCA 1471 |||||| |||||||||||||| |||||||| || |||||||| || ||||||||||||| Sbjct 1124 ATACAATGACGAGAAAGGGATTTGTTTCCTAACTGATTTTCTTGTTGTTGGTGAAAACCA 1183 Query 1472 GCAAACTTTTGACCTTGAAGGTGACAGTGGAAGCCTAATACTCTTAAC-G-GGTCCA--A 1527 ||| |||||||| ||||| ||||||||||||||||| || || || | | || | | | Sbjct 1184 GCAGACTTTTGATCTTGAGGGTGACAGTGGAAGCCTTATTCTGTTGGCTGCGGGCGATGA 1243 Query 1528 -ATGG-TCAGAAGCCACGACCAGTTGGGATCATTTGGGGAGGAACAGCCAACCGAGGAAG 1585 | | | |||| || ||||| ||||| || ||||||||||||||||| ||| | ||| | Sbjct 1244 GAAGAATGAGAAACCGCGACCTGTTGGAATTATTTGGGGAGGAACAGCAAACAGGGGACG 1303 Query 1586 ACTTAAA-CTAATAGCCGGTCAAGAACCCGAGAACTGGACAAGCGGAGTTGATCTTGGTC 1644 || || |||| || || || |||| ||||| |||||||| |||||||||||||| Sbjct 1304 G-TTGAAGCTAAAAGTGGGGGAACAACCTGAGAATTGGACAAGTGGAGTTGATCTTGGAA 1362 Query 1645 GCCTT-TTGGATCT-CTTGGAGCTTGATCTCATCACATCCAA 1684 | || || |||| |||| ||||||||||||| || ||||| Sbjct 1363 GAGTTCTTA-ATCTTCTTG-AGCTTGATCTCATTACTTCCAA 1402 > Ahg948543 jgi|Araly1|948543|scaffold_800430.1 Length=1778 Score = 608 bits (329), Expect = 5e-173 Identities = 764/970 (79%), Gaps = 46/970 (5%) Strand=Plus/Plus Query 741 CTTGTCTTTGTTGCTAGGAAAGTCCATAGGCAATGGCTAAATCC-AATGCAGTGCCTT-C 798 ||||| ||||||||| ||||||| || | ||||||||| ||||| | ||||| || | Sbjct 345 CTTGTTTTTGTTGCTCGGAAAGTTCACAAGCAATGGCTTAATCCTCCT-CAGTG-TTTAC 402 Query 799 CTTCTGCCCTT-GAGGGTCCTGGAGGGGTATGGTGCGATGTAGATGTTGTGGAATTCCAA 857 || | | |||| |||||||||||||| || ||||| |||||||||||||| || || ||| Sbjct 403 CTACAG-CCTTGGAGGGTCCTGGAGGAGTTTGGTGTGATGTAGATGTTGTTGAGTTTCAA 461 Query 858 TACTACGGTGCTCCTGCTGC-AAC-ACCAAAGGAACAAGTTTATA-ATGAACTTGTAGAT 914 || || ||||| ||||| || ||| ||||| || || || |||| | || ||||| ||| Sbjct 462 TATTATGGTGCACCTGC-GCAAACGCCCAAA-GAGCAGGTGTATACA-GAGCTTGTTGAT 518 Query 915 GGTTTGAGAGGAAGTGATCCCTGCATTGGCTCTGGTTCTCAGGTTGCAAGCCAAGAAACA 974 | | ||||||| |||| | | | ||| || |||||||| ||||| || |||||||| ||| Sbjct 519 GATCTGAGAGGCAGTGGTTCGTCCATCGGATCTGGTTCACAGGTGGCTAGCCAAGAGACA 578 Query 975 TATGGAACCTTGGGAGCTATAGTGAAA-AGCAGAACAGGTAACCA-CCAGGTTGGTTTCC 1032 |||||||||||||||||||| || ||| || | ||| || || || || ||||| |||| Sbjct 579 TATGGAACCTTGGGAGCTATTGT-AAAGAGTAAAACCGG-AATCAGACAAGTTGGCTTCC 636 Query 1033 TTACCAATCGGCATGTCGCAGTTGATTTGGATTATCCAAGCCAGAAAATGTTTCATCCTT 1092 |||| || || ||||| ||||||||||| || || ||||||||||| ||||||||||||| Sbjct 637 TTACAAACCGTCATGTTGCAGTTGATTTAGACTACCCAAGCCAGAAGATGTTTCATCCTT 696 Query 1093 TACCTCCAAGCCTTGGACCGGGTGTCTACCTCGGTGCAGTTGAGAGAGCAACATCGTTTA 1152 | || || ||||| ||||| || |||||| | |||||||| || |||||||| || || | Sbjct 697 TGCCACCTAGCCTCGGACCCGGAGTCTACTTAGGTGCAGTGGAAAGAGCAACTTCATTCA 756 Query 1153 TCACAGATGATCAGTGGTATGGCATATTT-GCTGGCACAAATCCAGAAACGTTTGTGAGA 1211 | || ||||| | ||||||||||| ||| ||||| || || |||||||| ||||| || Sbjct 757 TTACCGATGACCTTTGGTATGGCAT-TTTCGCTGGAACTAACCCAGAAACATTTGTTCGA 815 Query 1212 GCGGATGGTGCCTTTATTCCTTTTGCAGAAGATTTCAACACGAGCAATGTAACTAC-GTT 1270 || ||||| ||||| || || ||||| || || ||||||| || |||||||| || | Sbjct 816 GCTGATGGAGCCTTCATACCATTTGCGGAGGACTTCAACATGAATAATGTAACCACAACT 875 Query 1271 GAT-AAAGGGCATTGGTGAGATAGG-AGATGTGCACGTTA-TAGACT-TGCAATCCCCAA 1326 | | ||| || ||||||||||| || | || | || | || | || | | || || |||| Sbjct 876 G-TCAAA-GGTATTGGTGAGATCGGTA-ATATCCATGCTACT-GA-TCTACAGTCACCAA 930 Query 1327 TTGATAGCCTTATTGGGAA--ACAAGTTGTCAAAGTTGGAAGAAGCTCTGGATAT-ACCA 1383 | | || | || | |||| | |||||||||||||||||||||||||||| | | |||| Sbjct 931 TCAACAGTC-TAATAGGAAGGA-AAGTTGTCAAAGTTGGAAGAAGCTCTGGTT-TGACCA 987 Query 1384 CCGGAACCATAATGGCTTATGCATTGGAATACAACGACGAGAAAGGGATCTGTTTCCTCA 1443 | || ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||| | Sbjct 988 CTGGGACCATAATGGCATATGCGTTGGAATACAATGACGAGAAAGGGATTTGTTTCCTAA 1047 Query 1444 CGGATTTTCTGGTCATTGGTGAAAACCAGCAAACTTTTGACCTTGAAGGTGACAGTGGAA 1503 | |||||||| || |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct 1048 CTGATTTTCTTGTTGTTGGTGAAAACCAGCAGACTTTTGATCTTGAGGGTGACAGTGGAA 1107 Query 1504 GCCTAATACTCTTAAC-G-GGTCCA--A-ATGG-TCAGAAGCCACGACCAGTTGGGATCA 1557 |||| || || || | | || | | | | | | |||| || ||||| ||||| || | Sbjct 1108 GCCTTATTCTGTTGGCTGCGGGCGATGAGAAGAATGAGAAACCGCGACCTGTTGGAATTA 1167 Query 1558 TTTGGGGAGGAACAGCCAACCGAGGAAGACTTAAA-CTAATAGCCGGTCAAGAACCCGAG 1616 |||||||||||||||| ||| | ||| | || || |||| || || || |||| ||| Sbjct 1168 TTTGGGGAGGAACAGCAAACAGGGGACGG-TTGAAGCTAAAAGTGGGGGAACAACCTGAG 1226 Query 1617 AACTGGACAAGCGGAGTTGATCTTGGTCGCCTT-TTGGATCT-CTTGGAGCTTGATCTCA 1674 || |||||||| |||||||||||||| | || || |||| |||| |||||||||||| Sbjct 1227 AATTGGACAAGTGGAGTTGATCTTGGAAGAGTTCTTA-ATCTTCTTG-AGCTTGATCTCA 1284 Query 1675 TCACATCCAA 1684 | || ||||| Sbjct 1285 TTACTTCCAA 1294 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85207878065 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5