BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G36530.1
Length=1743
Score E
Sequences producing significant alignments: (Bits) Value
Ahg934284 jgi|Araly1|934284|scaffold_402272.1 2294 0.0
Ahg938189 jgi|Araly1|938189|scaffold_502380.1 1535 0.0
Ahg946853 jgi|Araly1|946853|scaffold_703082.1 422 5e-117
Ahg896115 jgi|Araly1|896115|Al_scaffold_0005_81 411 1e-113
> Ahg934284 jgi|Araly1|934284|scaffold_402272.1
Length=1400
Score = 2294 bits (1242), Expect = 0.0
Identities = 1347/1399 (96%), Gaps = 2/1399 (0%)
Strand=Plus/Plus
Query 60 TCTCTTTCTCTAGATCTACTCGCTATGGCTACTATCACCGTTGTTAAGGCTAGACAGATC 119
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1 TCTCTCTCTCTAGATCTACTCGCTATGGCTACTATCACCGGTGTTAAGGCTAGACAGATC 60
Query 120 TTCGACAGTCGTGGTAATCCCACCGTTGAGGTTGATATCCACACGTCAAATGGTATTAAG 179
|| ||||| ||||||||||||||||| ||||||||||||||||| || | |||| | |||
Sbjct 61 TTTGACAGCCGTGGTAATCCCACCGTCGAGGTTGATATCCACACATCCAGTGGTGTCAAG 120
Query 180 GTTACAGCAGCTGTTCCAAGTGGAGCTTCCACTGGTATCTATGAGGCTCTTGAGCTGAGG 239
|||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 121 GTTACAGCAGCTGTACCAAGTGGAGCTTCCACTGGAATCTACGAGGCTCTTGAGCTGAGG 180
Query 240 GATGGAGGATCTGACTACCTTGGAAAGGGTGTATCTAAGGCTGTTGGCAATGTGAACAAC 299
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 181 GATGGAGGATCTGACTACCTTGGAAAGGGTGTCTCTAAGGCTGTTGGCAATGTGAACAAT 240
Query 300 ATCATCGGGCCAGCACTTATTGGAAAGGACCCAACTCAGCAGACTGCTATTGACAACTTC 359
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 241 ATCATCGGCCCAGCACTTATTGGCAAGGACCCAACTCAGCAGACTGCTATTGACAACTTC 300
Query 360 ATGGTCCATGAACTTGACGGAACCCAAAACGAGTGGGGGTGGTGCAAGCAAAAGCTTGGA 419
||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||
Sbjct 301 ATGGTCCATGAACTTGATGGAACCCAGAATGAGTGGGGTTGGTGCAAGCAAAAGCTTGGA 360
Query 420 GCCAATGCGATTCTTGCTGTGTCTCTTGCTGTCTGCAAAGCTGGGGCTGTTGTCAGCGGC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GCCAATGCGATTCTTGCTGTGTCTCTTGCTGTCTGCAAAGCTGGGGCTGTTGTCAGCGGC 420
Query 480 ATTCCTCTATACAAGCACATTGCCAACCTTGCTGGTAACCCCAAGATTGTGCTACCAGTT 539
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 421 ATTCCTCTATACAAGCACATTGCCAATCTTGCTGGTAACCCCAAGATTGTGCTACCAGTT 480
Query 540 CCTGCCTTCAACGTCATCAATGGTGGATCCCATGCCGGAAACAAGCTTGCTATGCAGGAG 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CCTGCCTTCAACGTCATCAATGGTGGATCCCATGCCGGAAACAAGCTTGCTATGCAGGAG 540
Query 600 TTTATGATCCTCCCTGTTGGAGCTGCTTCTTTCAAGGAAGCCATGAAGATGGGTGTGGAA 659
|||||||| ||||||||||||||| | ||||||| |||||||||||| ||||||||||||
Sbjct 541 TTTATGATTCTCCCTGTTGGAGCTTCATCTTTCACGGAAGCCATGAAAATGGGTGTGGAA 600
Query 660 GTTTACCACCACTTGAAGTCTGTGATTAAGAAGAAGTACGGCCAGGATGCCACAAATGTT 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 GTTTACCACCACTTGAAGTCTGTGATTAAGAAGAAGTACGGCCAGGATGCCACAAATGTT 660
Query 720 GGTGATGAAGGTGGGTTTGCACCAAACATTCAGGAGAACAAGGAGGGTCTTGAATTGCTC 779
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 661 GGTGATGAAGGTGGCTTTGCACCAAACATTCAGGAGAACAAGGAAGGTCTTGAATTGCTC 720
Query 780 AAGACTGCTATCGAGAAGGCTGGATACACTGGAAAGGTTGTCATTGGAATGGATGTTGCC 839
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 721 AAGACTGCTATCGAGAAGGCTGGCTACACCGGAAAGGTTGTCATTGGAATGGATGTTGCC 780
Query 840 GCTTCAGAGTTCTACTCAGAAGACAAGACCTACGACTTGAACTTCAAAGAAGAGAACAAC 899
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 781 GCTTCAGAGTTCTACTCATCAGACAAGACCTACGACTTGAACTTCAAAGAAGAGAACAAT 840
Query 900 AATGGCT-CTCAGAAGATTTCTGGTGATGCTCTAAAGGACCTGTACAAGTCCTTTGTCGC 958
||| || ||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 841 GATG-CTTCTCAGAAGATTTCTGGTGATGCTCTCAAGGACCTGTACAAGTCCTTTGTTTC 899
Query 959 TGAGTACCCAATCGTGTCCATTGAGGACCCATTTGACCAAGATGACTGGGAGCACTATGC 1018
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 900 TGAGTACCCAATTGTGTCCATTGAGGACCCATTTGACCAAGATGATTGGGAGCACTATGC 959
Query 1019 TAAGATGACCACTGAGTGTGGAACCGAGGTTCAGATTGTCGGTGATGATTTGTTGGTCAC 1078
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 960 TAAGATGACCACTGAGTGTGGAACCGAGGTTCAGATTGTGGGTGATGATTTGTTGGTCAC 1019
Query 1079 TAACCCCAAGAGAGTTGCTAAGGCAATCGCAGAGAAGTCTTGCAATGCTCTTCTTTTGAA 1138
||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct 1020 CAACCCCAAGAGAGTTGCTAAGGCAATCGCCGAAAAGTCTTGCAACGCTCTTCTTTTGAA 1079
Query 1139 GGTTAACCAAATCGGATCTGTAACCGAGAGTATCGAGGCAGTTAAGATGTCGAAGAAAGC 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 GGTTAACCAAATCGGATCTGTAACCGAGAGTATCGAGGCAGTTAAGATGTCGAAGAAAGC 1139
Query 1199 AGGTTGGGGAGTGATGACCAGCCACAGAAGTGGTGAAACCGAGGACACATTCATTGCTGA 1258
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1140 AGGTTGGGGAGTGATGACCAGCCACCGAAGTGGTGAAACCGAGGACACATTCATTGCTGA 1199
Query 1259 CTTAGCCGTTGGCTTGTCCACTGGACAAATCAAAACCGGTGCTCCTTGCAGATCCGAGCG 1318
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 CTTAGCCGTTGGCTTGTCTACTGGACAAATCAAAACCGGTGCTCCTTGCAGATCCGAGCG 1259
Query 1319 TCTTGCCAAGTACAACCAGCTTTTGCGTATTGAGGAGGAGTTGGGATCAGAGGCAATTTA 1378
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1260 TCTTGCCAAGTACAACCAGCTTTTGCGTATCGAGGAGGAGTTGGGATCAGAGGCAATTTA 1319
Query 1379 CGCTGGAGTCAACTTCCGCAAACCTGTGGAACCCTACTAAATGGAGCTTTTAGAAGCAAA 1438
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1320 CGCTGGAGCCAACTTCCGCAAACCTGTGGAACCCTACTAAGTGGAGCTTTTAGAAGCAAA 1379
Query 1439 GTGGTCTTCTTTGTGACGA 1457
|||||||||||||||||||
Sbjct 1380 GTGGTCTTCTTTGTGACGA 1398
> Ahg938189 jgi|Araly1|938189|scaffold_502380.1
Length=1376
Score = 1535 bits (831), Expect = 0.0
Identities = 1188/1362 (87%), Gaps = 17/1362 (1%)
Strand=Plus/Plus
Query 66 TCTCT-AGATCTACTCG--CTATGGCTACTATCACCGTTGTTAAGGCTAGACAGATCTTC 122
||||| ||||||| | | |||||||||||||||| | |||||| |||||||||||||||
Sbjct 1 TCTCTAAGATCTAATTGAACTATGGCTACTATCACTGCTGTTAAAGCTAGACAGATCTTC 60
Query 123 GACAGTCGTGGTAATCCCACCGTTGAGGTTGATATCCACACGTCAAATGGTATTAAGGTT 182
||||| ||||| || |||||||| ||||| ||| ||||||| || | ||| |||||||
Sbjct 61 GACAGCCGTGGCAACCCCACCGTCGAGGTCGATGTCCACACATCCACCGGTGTTAAGGTC 120
Query 183 ACAGCAGCTGTTCCAAGTGGAGCTTCCACTGGTATCTATGAGGCTCTTGAGCTGAGGGAT 242
| ||| || ||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 121 AGAGCTGCCGTTCCTAGTGGAGCTTCCACTGGAATCTACGAGGCTCTTGAGCTGAGGGAT 180
Query 243 GGAGGATCTGACTACCTTGGAAAGGGTGTATCTAAGGCTGTTGGCAATGTGAACAAC-AT 301
|||||||| |||||||||||||| ||||| || ||||||||||| ||||| ||| | ||
Sbjct 181 GGAGGATCGGACTACCTTGGAAAAGGTGTTTCAAAGGCTGTTGGAAATGTTAAC-TCAAT 239
Query 302 CATCGGGCCAGCACTT-ATTGGAAAGGACCCAACTCAGCAGACTGCTATTGACAACTTCA 360
||| || ||||| || ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 240 CATTGGCCCAGC-GTTGATTGGAAAGGACCCAACTCAGCAAACTGCTATTGATAACTTCA 298
Query 361 TGGTCCATGAACTTGACGGAACCCAAAACGAGTGGGGGTGGTGCAAGCAAAAGCTTGGAG 420
|||| ||||||||||| || |||||||| || ||||| ||||||||||||||||||||||
Sbjct 299 TGGTTCATGAACTTGATGGGACCCAAAATGAATGGGGTTGGTGCAAGCAAAAGCTTGGAG 358
Query 421 CCAATGCGATTCTTGCTGTGTCTCTTGCTGTCTGCAAAGCTGGGGCTGTTGTCAGCGGCA 480
||||||| ||||||||||| |||||||| |||||||||||||| || ||||| | ||||
Sbjct 359 CCAATGCAATTCTTGCTGTTTCTCTTGCGGTCTGCAAAGCTGGTGCCGTTGTTAATGGCA 418
Query 481 TTCCTCTATACAAGCACATTGCCAACCTTGCTGGTAACCCCAAGATTG-TGCTACCAGTT 539
||||||| ||||||||||| ||||| |||||||||||||||||| ||| |||||||||||
Sbjct 419 TTCCTCTCTACAAGCACATCGCCAATCTTGCTGGTAACCCCAAG-TTGATGCTACCAGTT 477
Query 540 CCTGCCTTCAACGTCATCAATGGTGGATCCCATGCCGGAAACAAGCTTGCTATGCAGGAG 599
||||||||||| |||||||| |||||||| ||||| |||||||||||||| ||||| |||
Sbjct 478 CCTGCCTTCAATGTCATCAACGGTGGATCTCATGCAGGAAACAAGCTTGCAATGCAAGAG 537
Query 600 TTTATGATCCTCCCTGTTGGAGCTGCTTCTTTCAAGGAAGCCATGAAGATGGGTGTGGAA 659
|| ||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct 538 TTCATGATTCTCCCTGTTGGAGCTTCATCTTTCAAGGAAGCCATGAAAATGGGTGTGGAA 597
Query 660 GTTTACCACCACTTGAAGTCTGTGATTAAGAAGAAGTACGGCCAGGATGCCACAAATGTT 719
|| |||||| ||||||||||||||||||||||||||||||| || ||||| ||||| |||
Sbjct 598 GTCTACCACAACTTGAAGTCTGTGATTAAGAAGAAGTACGGTCAAGATGCAACAAACGTT 657
Query 720 GGTGATGAAGGTGGGTTTGCACCAAACATTCAGGAGAACAAGGAGGGTCTTGAA-TTGCT 778
|||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| || ||
Sbjct 658 GGTGATGAAGGTGGCTTTGCACCAAACATTCAGGAGAACAAGGAAGGTCTCGAACTT-CT 716
Query 779 CAAGACTGCTATCGAGAAGGCTGGATACACTGGAAAGGTTGTCATTGGAATGGATGTTGC 838
||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 717 CAAGACTGCCATCGAGAAGGCTGGATACACTGGCAAGGTGGTCATTGGAATGGATGTTGC 776
Query 839 CGCTTCAGAGTTCTACTCAGAAGACAAGACCTACGACTTGAACTTCAAAGAAGAGAACAA 898
|| || ||||| |||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 777 TGCATCCGAGTTTTACTCATCAGACAAGAAATACGACTTGAACTTCAAAGAAGAGAACAA 836
Query 899 CAATGGCTCTCAGAAGATTTCTGGTGATGCTCTAAAGGACCTGTACAAGTCCTTTGTCGC 958
| |||| ||||||||||| ||||| |||||||| |||||||| |||||||| || || |
Sbjct 837 CGATGGTTCTCAGAAGATCTCTGGAGATGCTCTCAAGGACCTATACAAGTCATTCGTTTC 896
Query 959 TGAGTACCCAATCGTGTCCATTGAGGACCCATTTGACCAAGATGACTGGGAGCACTATGC 1018
|| |||||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 897 CGAATACCCAATTGTATCCATTGAAGACCCATTTGACCAAGATGACTGGGAGCACTATGC 956
Query 1019 TAAGATGACCACTGAGTGTGGA-ACCGAGGTTCAGATTGTCGGTGATGATTTGTTGGTCA 1077
||| |||||| |||| ||||| | || |||| |||||||||||||||||| ||||||
Sbjct 957 TAAAATGACCGCTGAATGTGGCGAGAAAG-TTCAAATTGTCGGTGATGATTTGCTGGTCA 1015
Query 1078 CTAACCCCAAGAGAGTTGCTAAGGCAATCGCA-GAGAAGTCTTGCAATGCTCTTCTTTTG 1136
| || |||||||| |||| ||||||||| | || ||||||||||||||||||||||||
Sbjct 1016 CCAATCCCAAGAGGGTTGAGAAGGCAATCA-ATGAAAAGTCTTGCAATGCTCTTCTTTTG 1074
Query 1137 AAGGTTAACCAAATCGGATCTGTAACCGAGAGTATCGAGGCAGTTAAGATGTCGAAGAAA 1196
|||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| |
Sbjct 1075 AAGGTTAACCAAATTGGATCAGTAACCGAGAGTATCGAGGCAGTTAAGATGTCAAAGAGA 1134
Query 1197 GCAGGTTGGGGAGTGATGACCAGCCACAGAAGTGGTGAAACCGAGGACACATTCATTGCT 1256
|| ||||||||||||||| | |||||| | ||||| || ||||||||||| |||||||||
Sbjct 1135 GCTGGTTGGGGAGTGATGGCTAGCCACCGTAGTGGAGAGACCGAGGACACCTTCATTGCT 1194
Query 1257 GACTTAGCCGTTGGCTTGTCCACTGGACAAATCAAAACCGGTGCTCCTTGCAGATCCGAG 1316
|||||| | || || || || || || |||||||| || || |||||||||||||| ||
Sbjct 1195 GACTTATCTGTCGGTTTATCAACCGGGCAAATCAAGACGGGAGCTCCTTGCAGATCAGAA 1254
Query 1317 CGTCTTGCCAAGTACAACCAGCTTTTGCGTATTGAGGAGGAG-TTGGGATCAGAGGCAAT 1375
||||| ||||| ||||| ||||| || || ||||| |||||| |||| | |||| |||||
Sbjct 1255 CGTCTGGCCAAATACAATCAGCTATTACGAATTGAAGAGGAGCTTGG-AGCAGACGCAAT 1313
Query 1376 TTACGCTGGAGTCAACTTCCGCAAACCTGTGGAACCCTACTA 1417
|| || |||| |||||||||||| || || || || |||||
Sbjct 1314 ATATGCAGGAGCCAACTTCCGCAAGCCCGTTGAGCCGTACTA 1355
> Ahg946853 jgi|Araly1|946853|scaffold_703082.1
Length=1889
Score = 422 bits (228), Expect = 5e-117
Identities = 351/410 (86%), Gaps = 10/410 (2%)
Strand=Plus/Plus
Query 735 TTTGCACCAAACATTCAGGAGAACAAGGAGGGTCTTGAATTGCTCAAGACTGCTATCGAG 794
|||||||||||||||||||||||||| || ||||| ||| |||| |||||||| || |||
Sbjct 240 TTTGCACCAAACATTCAGGAGAACAAAGAAGGTCTAGAACTGCTTAAGACTGCCATTGAG 299
Query 795 AAGGCTGGATACACTGGAAAGGTTGTCATTGGAATGGATGTTGCCGCTTCAGAGTTCTAC 854
||||| ||||||||||| ||||||||||||||||||||||| || || || |||||||||
Sbjct 300 AAGGCCGGATACACTGGCAAGGTTGTCATTGGAATGGATGTCGCTGCGTCTGAGTTCTAC 359
Query 855 TCAGAAGACAAGACCTACGACTTGAACTTCAAAGAAGAGAACAACAATGGCTCTCAGAAG 914
||| |||||||| |||||||||||||||||||||||||||||| |||| ||||| |||
Sbjct 360 TCATCAGACAAGAAATACGACTTGAACTTCAAAGAAGAGAACAACGATGGTTCTCAAAAG 419
Query 915 ATTTCTGGTGATGCTCTAAAGGACCTGTACAAGTCCTTTGTCGCTGAGTACCC-AATCGT 973
|| ||||| |||||||| |||||| |||||||||| || || | |||||||| ||| ||
Sbjct 420 ATCTCTGGAGATGCTCTCAAGGACTTGTACAAGTCATTCGTTTCAGAGTACCCTAAT-GT 478
Query 974 GTCCATTGAGGACCCATTTGACCAAGATGACTGGGAGCACTATGCT-AAGATGACCACTG 1032
|||||||| ||||||||||||||||||||||||||| |||||| | || |||||| ||
Sbjct 479 ATCCATTGAAGACCCATTTGACCAAGATGACTGGGAGAACTATGTTGAA-ATGACCGTTG 537
Query 1033 AGTGTGGA-ACCGAGGTTCAGATTGTCGGTGATGATTTGTTGGTCACTAACCCCAAGAGA 1091
| ||||| | || |||| || ||||||||||||||| ||||||| ||||||||||||
Sbjct 538 AATGTGGCGAGAAAG-TTCAAATCGTCGGTGATGATTTGCTGGTCACCAACCCCAAGAGA 596
Query 1092 GTTGCTAAGGCAATCGCA-GAGAA-GTCTTGCAATGCTCTTCTTTTGAAG 1139
|||| ||||||||| | || || ||||||||||||| |||| ||||||
Sbjct 597 GTTGAGAAGGCAATCA-ATGA-AATGTCTTGCAATGCTGTTCTATTGAAG 644
> Ahg896115 jgi|Araly1|896115|Al_scaffold_0005_81
Length=810
Score = 411 bits (222), Expect = 1e-113
Identities = 349/410 (85%), Gaps = 10/410 (2%)
Strand=Plus/Plus
Query 735 TTTGCACCAAACATTCAGGAGAACAAGGAGGGTCTTGAATTGCTCAAGACTGCTATCGAG 794
|||||||||||||||||||||||||| || ||||| ||| |||| |||||||| || |||
Sbjct 226 TTTGCACCAAACATTCAGGAGAACAAAGAAGGTCTAGAACTGCTTAAGACTGCCATTGAG 285
Query 795 AAGGCTGGATACACTGGAAAGGTTGTCATTGGAATGGATGTTGCCGCTTCAGAGTTCTAC 854
||||| ||||||||| | ||||||||||||||||||||||| || || || |||||||||
Sbjct 286 AAGGCCGGATACACTTGCAAGGTTGTCATTGGAATGGATGTCGCTGCGTCTGAGTTCTAC 345
Query 855 TCAGAAGACAAGACCTACGACTTGAACTTCAAAGAAGAGAACAACAATGGCTCTCAGAAG 914
||| |||||||| |||||||||||||||||||||||||||||| |||| ||||| |||
Sbjct 346 TCATCAGACAAGAAATACGACTTGAACTTCAAAGAAGAGAACAACGATGGTTCTCAAAAG 405
Query 915 ATTTCTGGTGATGCTCTAAAGGACCTGTACAAGTCCTTTGTCGCTGAGTACCC-AATCGT 973
|| ||||| |||||||| |||||| |||||||||| ||||| | |||||||| ||| ||
Sbjct 406 ATCTCTGGAGATGCTCTCAAGGACTTGTACAAGTCATTTGTTTCAGAGTACCCTAAT-GT 464
Query 974 GTCCATTGAGGACCCATTTGACCAAGATGACTGGGAGCACTATGCT-AAGATGACCACTG 1032
|||||||| ||||||||||||||||||||||||||| |||||| | || |||||| ||
Sbjct 465 ATCCATTGAAGACCCATTTGACCAAGATGACTGGGAGAACTATGTTGAA-ATGACCGTTG 523
Query 1033 AGTGTGGA-ACCGAGGTTCAGATTGTCGGTGATGATTTGTTGGTCACTAACCCCAAGAGA 1091
| ||||| | || |||| || ||||||||||||||| ||||||| |||||||||| |
Sbjct 524 AATGTGGCGAGAAAG-TTCAAATCGTCGGTGATGATTTGCTGGTCACCAACCCCAAGAAA 582
Query 1092 GTTGCTAAGGCAATCGCA-GAGAAG-TCTTGCAATGCTCTTCTTTTGAAG 1139
||| ||||||||| | || ||| |||||||||||| |||| ||||||
Sbjct 583 GTTAAGAAGGCAATCA-ATGA-AAGGTCTTGCAATGCTGTTCTATTGAAG 630
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65400950665
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5