BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G36720.1 Length=3629 Score E Sequences producing significant alignments: (Bits) Value Ahg482652 jgi|Araly1|482652|fgenesh2_kg.4__1712__AT2G36720.1 4903 0.0 Ahg942815 jgi|Araly1|942815|scaffold_603359.1 547 2e-154 > Ahg482652 jgi|Araly1|482652|fgenesh2_kg.4__1712__AT2G36720.1 Length=3506 Score = 4903 bits (2655), Expect = 0.0 Identities = 2977/3129 (95%), Gaps = 36/3129 (1%) Strand=Plus/Plus Query 406 CAGTTCGGTTTGGCAATCTCCGGTTAAGCGGTTGG-CTGTAGACGGCGAGTGTGGTGAGG 464 ||||||||||||||||||||||||||||||||||| || | ||||| ||||||||||||| Sbjct 352 CAGTTCGGTTTGGCAATCTCCGGTTAAGCGGTTGGCCT-TTGACGGTGAGTGTGGTGAGG 410 Query 465 CTGGTGATAGGAGTAGGACTAGCTGTAAGAGAATTAAAACGACTCAAGTCAATGGTTTTA 524 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 411 CTGGTGATAGGAGTAGGACTAGCTGTAAGAGAATTAAAACGACTCAGGTCAATGGTTTTA 470 Query 525 TTGTTTACACTAGAACTAGGAAGACTAAATTCACCAAGCTTCATGAACAAGAAGATGAAA 584 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 471 TTGTTTACACTAGAACTAGGAAGACTAAATTCACCAAGCTTCATGAACAAGGAGATGAAA 530 Query 585 ATGCTGGATTG-TCGAATCATCTCGAGGA-GTCGAAACCAACGAGTGGTGTTAC-AAGTG 641 ||||||||||| | ||| | |||| | ||| ||| || | | || | | | || Sbjct 531 ATGCTGGATTGTTGGAA--A-ATCGA--ATGTC-AAATCATCTTGAGGAG-T-CGAA--A 580 Query 642 GCTTC-GGTGGTGATATGTGTCGCAGCAGCTCGGTAGGTGAAACTAACGTTAGTGGGAGC 700 | | ||||| || | | ||||| ||||||||||||| |||||||||| | Sbjct 581 CCAACAAATGGTGCTA-----C-AAATGGCTCGATAGGTGAAACTAAAGTTAGTGGGAAC 634 Query 701 TCTTGTGTTAAGAATACACTTGTTGAGAGCTCCTCCGGGAAAGTCGTTGT-GATAGAGCG 759 |||||| ||||||||||| ||||||||||| || |||||||| | | ||| || |||||| Sbjct 635 TCTTGTATTAAGAATACATTTGTTGAGAGCCCCGCCGGGAAAATTGATGTGGA-AGAGCG 693 Query 760 GTTAGTTACTGGCGGCTTAGCTGAAAGTCCGGCAGTTGAGACTGACAGTAGCTCATTAGT 819 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 694 GTTAGTTACTGGCAGCTTAGCTGAAAGTCCGGCAGTTGTGACTGACAGTAGCTCATTAGT 753 Query 820 GGATGTTGTAATTGACGACATCAATTTTGTGGAATTGTTACATGAAGCGATTCCTGTTGA 879 || |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 754 CGACGTTGTAATTGACGACATCAATTTTGTAGAATTGTTACATGAAGAGATTCCTGTTGA 813 Query 880 AATTCTGTCTGAAGGAAGCCTGGATTTTGAGGTGAAA-AGACTAGGAACTAAAGTTAGAA 938 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct 814 AATTCTGTCTGAAGGAAGCCTGGATTTTGAGGT-AAAGAGACTAGGAACTAAAGTTAGAA 872 Query 939 CCATGGGAAAATCCTATAGCGTCTCGGAGAAGAAAAAGCATGGATCTTTTAAGCGTACAG 998 ||||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||||||| Sbjct 873 CCATGGGAAAATCTTATAGCGTCTCAGAGAAGAAAAGGCATGGATCTTTTAAACGTACAG 932 Query 999 CACAGATCTATAAATCTATTGTGAGAATGAAGAAGGTAAATAATTTGGTCCCTGAGAATG 1058 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 933 CACAGATCTATAAATCTATTGTGAGAATGAAGAAGGTAAACAATTTGGTGCCTGAGAATG 992 Query 1059 TAGAGGTTCTTGCGGAACCAGACTTTGGCCGTGAGGGATTAGATGAACAGAGTCATTCTG 1118 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 993 TAGAGGTTCTTGCGGAACCAGACTTTGGCCATGAGGGATTAGATGAACAGAGTCATTCTG 1052 Query 1119 TCAGTCTT-GCGGACAAGTCCATTTTAATCCGCAGCAGGCCAGAAACAGTGA-GGGATCT 1176 ||||| || |||||||||||||||||||||||||| |||||||||||||||| |||| || Sbjct 1053 TCAGT-TTGGCGGACAAGTCCATTTTAATCCGCAGGAGGCCAGAAACAGTGAGGGGA-CT 1110 Query 1177 TTTTGAGACCGGTTTACTCGATGGTTTGTCGGTGGTTTACATGGGTACTGTTAAGTCTCA 1236 ||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 1111 TTTTGAGACCGGTATACTCGATGGTTTGTCTGTGGTTTACACGGGTACTGTTAAGTCTCA 1170 Query 1237 AGCCTTTCCTCTCCGTGGCATCATTAGAGATGGTGGAATTTTGTGCTCATGTTCCTCATG 1296 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1171 AGCCTTTGGTCTCCGTGGCATCATTAAAGATGGTGGAATTTTGTGCTCATGTTCCTCATG 1230 Query 1297 TGATTGGGCTAACGTTATTTCAACTTCCAAATTTGAGATTCATGCTTGTAAACAATACCG 1356 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1231 TGATTGGGCTCATGTTATTTCAACTTCCAAATTTGAGATTCATGCTTGTAAACAATACAG 1290 Query 1357 AAGAGCATCACAATACATTTGCTTTGAGAATGGTAAGAGCCTGCTAGATGTTCTAAATAT 1416 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1291 ACGAGCATCACAATACATTTGCTTTGAGAATGGTAAGAGCCTGCTAGATGTTTTAAATAT 1350 Query 1417 AAGTAGGAACACTCCTCTACATGCTCTCGAAGCAACAATTCTGGATGCTGTTGATTATGC 1476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1351 AAGTAGGAACACTCCTCTACATGCTCTCGAAGCAACAATTCTGGCTGCTGTTGATTATGC 1410 Query 1477 ATCTAAAGAAAAACGTTTTACCTGTAAAAGATGCAAAGGTCCCTTCCCTTTCTCCTCTCT 1536 |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1411 GTCTAAAGAAAAATGTTTTACCTGTAAAAGATGCAAAGGTTCCTTCCCTTTCTCCTCTCT 1470 Query 1537 TGGCCATAGAGGGTTTCTGTGTAAGTCATGCTCGGAGGTAGAAACTTCTCAGGCCAGCCT 1596 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1471 TGGCCATAGAGGGTTTCTGTGTATGTCATGCTCGGAGGTAGAAACTTCTCAGGCCAGCCC 1530 Query 1597 TGCTGCGACAAGGACCTCAACTAGTGCTCCTGCGTGCATAACATCTCCGGTTAAGAGTAG 1656 |||||| || ||||||||||| ||||||||||| |||||| ||||||| ||||||||||| Sbjct 1531 TGCTGCTACGAGGACCTCAACGAGTGCTCCTGCATGCATAGCATCTCCCGTTAAGAGTAG 1590 Query 1657 ATTGAAGATAACAAGAAAGCCATCAGAATCCACGTCAATATCACCAGTATTTATGTCATC 1716 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 1591 ATTGAAGATAACAAGAAAGCCATCAGAATCCACGTCAATATCGCCAGTATTTATGTCACC 1650 Query 1717 ACTTGGAAATAGCACTCGAAAGATAACAAGAAAGGCTTTACGTCAAGCTTTGGTTGGGAA 1776 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1651 ACTTGGAAATAGCACTCGAAATATAACAAGAAAGGCATTACGTCAAGCTTTGGTTGGGAA 1710 Query 1777 GGCTTATCTCAGTGCTTCTACAAATGTATCTTCACAAAAGAAGTGCCGATCAAAATTTAA 1836 ||||||||||||||||||||||||| ||||||||||||| |||||| || | |||||||| Sbjct 1711 GGCTTATCTCAGTGCTTCTACAAATATATCTTCACAAAATAAGTGCAGACCTAAATTTAA 1770 Query 1837 GAAGATGTTGACCCAACATTCTGTGACCCCCAAGGCTTTGAAAAGTGTGTCCCTTTCCGT 1896 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1771 GAAGATGTTGACCCAACATTCTGTGACCCCCAAGGCTTTGAAAAGTGTGTCCCTTTCTGT 1830 Query 1897 TTCTTCGAAAAAGAGGAGTTATAGATTAGCAAGAAAGGATCAAGGATTGCACAAGTTAGT 1956 |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct 1831 TTCTTCGAAAAAGAGGAGTTATAGATTAACAAGAAAGGATCAAGGATTGCATAAGTTAGT 1890 Query 1957 GTTTGATAGAGGGGGATTACCAGAGGGAACTGAACTAGGCTACTATGCTCGTGGACAGAA 2016 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1891 GTTTGAGAGAGGGGGATTACCAGAGGGAACTGAACTAGGATACTATGCTCGTGGACAGAA 1950 Query 2017 ATTGCTCGGAGGCTACAAAATGGGCGCTGGAATATATTGTTACTGTTGCAAGTGC-GAGG 2075 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 1951 ATTGCTCGGAGGCTACAAAATGGGCGCTGGAATATATTGTTACTGTTGCAAGT-CTGAGG 2009 Query 2076 TGAGCCCCTCTCTGTTCGAAGCTCATGCAGGCTGGGCATCTCGTAGAAAACCTTATTTTT 2135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2010 TGAGCCCCTCTCTGTTCGAAGCTCATGCAGGCTGGGCATCTCGTAGAAAACCTTATTTTT 2069 Query 2136 ACATATATACATCTAATGGTGTATCTCTTCACGAATGGGCAACTACTTTCTCACATGGTC 2195 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2070 ACATATATACATCTAATGGTGTATCTCTTCACGAATGGGCAACTACTTTCTCACAAGGTC 2129 Query 2196 GGAAATATTCTGCTAATGATAATAACGACTTGTGTGTTATTTGTGCTGATGGTGGAAATC 2255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2130 GGAAATATTCTGCTAATGATAATAACGACTTGTGTGTTATTTGTGCTGATGGTGGAAATC 2189 Query 2256 TTTTGCTCTGCGATAGCTGCCCAAGAGCTTTCCACATAGAATGTGTTTCCCTTCCGAGTA 2315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2190 TTTTGCTCTGCGATAGCTGCCCAAGAGCTTTCCACATAGAATGTGTTTCCCTTCCGAGTA 2249 Query 2316 TACCTCGTGGTAACTGGCATTGCAAATACTGCGAGAATAAGTTCACGAGCGAAATTGCTG 2375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2250 TACCTCGTGGTAACTGGCATTGCAAATACTGCGAGAATAAGTTCACGAGCGAAATTACTG 2309 Query 2376 GAGAGTACAATGTCAATTCTTCTGCAGTTGGGCAACTAGAAGGAGTTGATCCTGTTGATC 2435 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2310 GAGAGTACAATGTCAATTCTTCTGCAGTTGGGCAACTAGAAGGAGTTGATTCTGTTGATC 2369 Query 2436 AATTAGCTGGACGATGCATTCGCGTTGTCAAGAACATGGAAGCTGAAACAAATGGGTGTG 2495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2370 AATTAGCTGGACGATGCATTCGCGTTGTCAAGAACATGGAAGCTGAAACAAATGGGTGTG 2429 Query 2496 TATTATGCAGTGGTTCTGATTTTTGTAGATCAGGATTTGGGCCACGGACAATCATAATAT 2555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2430 TATTATGCAGTGGTTCTGATTTTTGTAGATCAGGATTTGGGCCACGGACAATCATAATAT 2489 Query 2556 GTGATCAGTGTGAAAAGGAGTACCACATTGGATGTTTGAGTAGTCAGAATATTGTGGATT 2615 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2490 GTGATCAGTGTGAAAAGGAGTACCACATTGGATGTTTGAGTAGTCAGAATATTGTGGATC 2549 Query 2616 TAAAGGAATTACCTAAAGGAAACTGGTTTTGCTCCATGGACTGTACGAGGATCAACTCCA 2675 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2550 TGAAGGAATTACCTAAAGGAAACTGGTTTTGCTCCATGGACTGTACGAGGATCAACTCCA 2609 Query 2676 CATTACAAAAGTTACTTCTTGGTGGGGCGGAGAAGCTTTCAGATTCTTCTTTGGGAATAA 2735 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2610 CATTACAAAAGTTACTTCTTGGTGGGGCGGAGAAGCTTTCAGATTCTTCTTTGGGAATAA 2669 Query 2736 TACAGACGAAGCAAGAGAGAAATGATGTATATTCCATCAGTGATCTTGACATCAGATGGA 2795 ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2670 TACAGACGAAGAAAGAAAGAAATGATGTATATTCCATCAGTGATCTTGACATCAGATGGA 2729 Query 2796 GACTGATCAGCGGCAAAGTTACTTCTCCTGAAAGCCGAATGTTACTGTCTCAGGCATTGG 2855 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2730 GACTGATCAGCGGCAAAGTTACTTCTCCTGAAAGCCGAATGTTACTCTCTCAGGCATTGG 2789 Query 2856 CTATTTTTCATGATTGCTTCGATCCTATAGTTGATCCACTTTCTGGGAGCAATCTTATTC 2915 ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 2790 CTATTTTTCATGATTGCTTTGATCCTATAGTTGATCCACTTTCTGGGCGCAATCTTATTC 2849 Query 2916 CGAGAATGGTTTACGGGAAGACTATGCAAGGACAAGACTACGGGGGAATCTGCTGTGCTG 2975 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2850 CGAGAATGGTTTACGGGAAGACTATGCAAGGACAAGACTACGGGGGAATCTGCTGTGCTG 2909 Query 2976 TTTTGACTGTTAATGCGACTGTTGTTTCTGCTGGACTATTACGAGTATTTGGCCGAGAGG 3035 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 2910 TTTTGACTGTTAATGCGACTGTTGTTTCTGCTGGACTACTGCGAGTATTTGGCCGAGAGG 2969 Query 3036 TTGCAGAACTTCCATTAGTTGCAACACGCATGTGCAGCCGAGAGAAGGGCTACTTTCAAT 3095 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2970 TTGCAGAACTTCCATTAGTTGCAACACGCATGTGCAGCCGAGAAAAGGGCTACTTTCAAT 3029 Query 3096 TGCTCTTTTCCTGCATTGAGAAGCTACTCTCATCCCTGAATGTTGAAAGCATCGTGGTTC 3155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3030 TGCTCTTTTCCTGCATTGAGAAGCTACTCTCATCCCTGAATGTTGAAAGCATCGTGGTTC 3089 Query 3156 CAGCAGCTGAAGAGGCAGAGCCCTTATGGATGAACAAATTTGGGTTCAGAAAACTTGCAC 3215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3090 CAGCAGCTGAAGAGGCAGAGCCCTTATGGATGAACAAATTTGGGTTCAGAAAACTTGCAC 3149 Query 3216 CTGAACAGCTCAGTAAGTATATAAAGATATGCTACCAAATGGTGAGGTTCAAAGGAGCAT 3275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3150 CTGAACAGCTCAGTAAGTATATAAAGATATGCTACCAAATGGTGAGGTTCAAAGGAGCAT 3209 Query 3276 CCATGCTGCAGAAACCAGT-CGATTCACACCAAATCATTGACAAGACAATCGAAACCGGT 3334 ||||||||||||||||||| | || ||||||||||||||||||||| |||||||||| || Sbjct 3210 CCATGCTGCAGAAACCAGTGC-ATGCACACCAAATCATTGACAAGAAAATCGAAACCAGT 3268 Query 3335 GCATCTTTAGAAGAAAATTTTGATTTGAAACAAGCCAATGAGTTGTATGTTCATCCTTTG 3394 | |||||||||||||| || |||| ||||||||||||||||||||||||| ||||||||| Sbjct 3269 GTATCTTTAGAAGAAAGTTCTGATATGAAACAAGCCAATGAGTTGTATGTGCATCCTTTG 3328 Query 3395 TGTTGAGGCAAAGCAAGTCATGGATTTAGTGAAAGATGGATTAAAGGGTGAAGCGTTTAG 3454 |||||||| ||||||||||| |||||| |||||||||||||||||| |||||| |||||| Sbjct 3329 TGTTGAGGTAAAGCAAGTCACGGATTTGGTGAAAGATGGATTAAAGAGTGAAGTGTTTAG 3388 Query 3455 GTTTTAAACAAGTTCTTACAACATATA--CTAGTGTAAATTTTTGTAGATGCGAAGCTCt 3512 |||||||| | ||||||||||| | | || |||||||||||||||||||||||||||| Sbjct 3389 GTTTTAAATGACTTCTTACAACAGAGAGACTTGTGTAAATTTTTGTAGATGCGAAGCTCT 3448 Query 3513 tttttgtta 3521 ||||||||| Sbjct 3449 TTTTTGTTA 3457 Score = 248 bits (134), Expect = 2e-64 Identities = 213/249 (86%), Gaps = 14/249 (6%) Strand=Plus/Plus Query 15 CCAGTGGCTGCAAAATCCTAAATCTC-ACCGAAAAGGATTTTGTATTGTTACATCCTCTT 73 |||||||||||||||||||||||| | ||| |||||||||||| | || || |||| Sbjct 1 CCAGTGGCTGCAAAATCCTAAATCCCAACCCAAAAGGATTTTG---T-TT-CA---TCTT 52 Query 74 CTTCTTCCTCCAGATCCATGTATGAAACCTCCCCTGAACCCTAATTTAGCTATCGAATTT 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 53 CTTCTTCCTCCAGATCCATGTATGAAACCTCCCCTGAACCCTAATTTAGCTATCGAATTT 112 Query 134 GAGATTCGATCCGATGTTTACTTCCAAATCTTCGTTTCGTCTCTGA-TAATATAACTCCA 192 |||||||||||||||| | ||||| ||||| ||| ||||||||||| ||| | | | ||| Sbjct 113 GAGATTCGATCCGATGCTCACTTCTAAATCCTCGATTCGTCTCTGAATAACA-ACC-CCA 170 Query 193 TCGTAATAGAACTGATT-TCAAGACGGTTCGTTTCGTTTTCCTCTATCCCAGATTCGGAA 251 ||||||| | || || || | |||||||||||||| |||||| ||||||| | || Sbjct 171 TCGTAATCGT-CTAATACTCTTCAATGTTCGTTTCGTTTTTCTCTATGCCAGATTTGAAA 229 Query 252 AGCTACCTT 260 ||||||||| Sbjct 230 AGCTACCTT 238 > Ahg942815 jgi|Araly1|942815|scaffold_603359.1 Length=682 Score = 547 bits (296), Expect = 2e-154 Identities = 318/329 (97%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 2987 AATGCGACTGTTGTTTCTGCTGGACTATTACGAGTATTTGGCCGAGAGGTTGCAGAACTT 3046 ||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct 270 AATGCGACTGTTGTTGCTGCTGGACTACTAAGAGTATTTGGCCGAGAGGTTGCAGAACTT 329 Query 3047 CCATTAGTTGCAACACGCATGTGCAGCCGAGAGAAGGGCTACTTTCAATTGCTCTTTTCC 3106 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 330 CCATTAGTTGCAACACGCATGTGCAGCCGAGAGAAGGGCTACTTTCAATTGCTCTTTTCT 389 Query 3107 TGCATTGAGAAGCTACTCTCATCCCTGAATGTTGAAAGCATCGTGGTTCCAGCAGCTGAA 3166 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 390 TGCATTGAGAAGCTACTCTCATCCCTGAATGTTGGAAGCATAGTGGTTCCAGCAGCTGAA 449 Query 3167 GAGGCAGAGCCCTTATGGATGAACAAATTTGGGTTCAGAAAACTTGCACCTGAACAGCTC 3226 |||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 450 GAGGAAGAGCATTTATGGATGAACAAATTTGGGTTCAGAAAACTTGCACCTGAACAACTC 509 Query 3227 AGTAAGTATATAAAGATATGCTACCAAATGGTGAGGTTCAAAGGAGCATCCATGCTGCAG 3286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 510 AGTAAGTATATAAAGATATGCTACCAAATGGTGAGGTTCAAAGGAGCATCCATGCTGCAG 569 Query 3287 AAACCAGTCGATTCACACCAAATCATTGA 3315 |||||||| |||||||||||||||||||| Sbjct 570 AAACCAGTTGATTCACACCAAATCATTGA 598 Score = 226 bits (122), Expect = 1e-57 Identities = 128/131 (98%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 2615 TTAAAGGAATTACCTAAAGGAAACTGGTTTTGCTCCATGGACTGTACGAGGATCAACTCC 2674 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 141 TTAAAAGAATTACCTAAAGGAAATTGGTTTTGCTCCATGGACTGTACGAGGATCAACTCC 200 Query 2675 ACATTACAAAAGTTACTTCTTGGTGGGGCGGAGAAGCTTTCAGATTCTTCTTTGGGAATA 2734 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 201 ACATTACAAAAGTTACTTCTTGGTGGGGCGGAGAAGCTTTCAGATTCTTCTATGGGAATA 260 Query 2735 ATACAGACGAA 2745 ||||||||||| Sbjct 261 ATACAGACGAA 271 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 137083377946 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5