BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G36750.1 Length=1577 Score E Sequences producing significant alignments: (Bits) Value Ahg482658 jgi|Araly1|482658|fgenesh2_kg.4__1718__AT2G36750.1 2355 0.0 Ahg482660 jgi|Araly1|482660|fgenesh2_kg.4__1720__AT2G36800.1 1166 0.0 Ahg934312 jgi|Araly1|934312|scaffold_402300.1 1081 0.0 > Ahg482658 jgi|Araly1|482658|fgenesh2_kg.4__1718__AT2G36750.1 Length=1529 Score = 2355 bits (1275), Expect = 0.0 Identities = 1427/1503 (95%), Gaps = 0/1503 (0%) Strand=Plus/Plus Query 21 AGAGAGTTCCTCATGGCATCGGAATTTCGTCCTCCTCTTCATTTTGTTCTCTTCCCTTTC 80 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 1 AGAGAGTTCCTCATGGCATCCGAATTTCGTCCTCCTCTTCACTTTGTTCTCTTCCCTTTC 60 Query 81 ATGGCTCAAGGCCACATGATCCCAATGGTAGATATTGCAAGGCTCCTGGCTCAGCGCGGG 140 ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||||||||| Sbjct 61 ATGGCTCAAGGTCACATGATCCCCATGGTGGATATTGCAAGGCTCTTGGCTCAGCGCGGG 120 Query 141 GTGACTATAACCATTGTCACTACACCTCAAAACGCAGGCCGGTTCAAGAACGTTCTTAGC 200 |||||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||| Sbjct 121 GTGACTATAACCATTGTCACGACGCCTCACAACGCAGGCCGGTTCAAGAACGTTTTTAGC 180 Query 201 CGGGCTATCCAATCCGGCTTGCCCATCAATCTCGTGCAAGTAAAGTTTCCATCTCAAGAA 260 ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 181 CGGGCCATCCAGTCCGGCTTGCCCATCAATCTTGTGCAAGTAAAGTTTCCATCTCAAGAA 240 Query 261 TCGGGTTCACCGGAAGGACAGGAGAATTTGGACTTGCTCGATTCATTGGGGGCTTCATTA 320 ||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||| Sbjct 241 TCGGGTTCACCCGAAGGACAGGAGAATTTGGACTTGCTGGATTCGTTGGGGGCGTCATTA 300 Query 321 ACCTTCTTCAAAGCATTTAGCCTGCTCGAGGAACCAGTCGAGAAGCTCTTGAAAGAGATT 380 |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| Sbjct 301 ACCTTCTTCAAAGCATCTAGCCTGCTTGAGGAACCGGTCGAGAAGCTCTTGAAAGAGATT 360 Query 381 CAACCTAGGCCAAACTGCATAATCGCTGACATGTGTTTGCCTTATACAAACAGAATTGCC 440 ||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 361 CAACCTAGGCCAAGCTGCATAATCGCCGACATGTGTTTGCCTTATACAAACCGAATTGCC 420 Query 441 AAGAATCTTGGTATACCAAAAATCATCTTTCATGGCATGTGTTGCTTCAATCTTCTTTGT 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 AAGAATCTTGGTATACCAAAAATCATCTTTCATGGCATGTGTTGCTTCAATCTTCTTTGT 480 Query 501 ACGCACATAATGCACCAAAACCACGAGTTCTTGGAAACTATAGAGTCTGACAAGGAATAC 560 |||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||| ||| Sbjct 481 ACGCACATTATGCACCAAAACTACGAGTTATTGGAAACTATAGAGTCTGAAAAGGAGTAC 540 Query 561 TTCCCCATTCCTAATTTCCCTGACAGAGTTGAGTTCACAAAATCTCAGCTTCCAATGGTA 620 ||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 541 TTCTCCATTCCAAATTTCCCTGACCGAGTTGAGTTCACAAAATCTCAGCTTCCAATGGTT 600 Query 621 TTAGTTGCTGGAGATTGGAAAGACTTCCTTGACGGAATGACAGAAGGGGATAACACTTCT 680 ||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||||||| Sbjct 601 TTAGTTGCTGGAGATTGGAAAGAGTTTCTTGACGAAATGACAGAAGCGGATAACACTTCT 660 Query 681 TATGGTGTGATTGTTAACACGTTTGAAGAGCTCGAGCCAGCTTATGTTAGAGACTACAAG 740 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TTTGGTGTGATTGTTAACACGTTTGAAGAGCTCGAGCCAGCTTATGTTAGAGACTACAAG 720 Query 741 AAGGTTAAAGCGGGTAAGATATGGAGCATCGGACCGGTTTCCTTGTGCAACAAGTTAGGA 800 ||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 721 AAGGTTAAAGCCGGTAAGGTATGGAGCATCGGGCCGGTTTCCTTGTGCAACAAGGTAGGA 780 Query 801 GAAGACCAAGCTGAGAGGGGAAACAAGGCGGACATTGATCAAGACGAGTGTATTAAATGG 860 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 781 GAAGACAAAGCTGAGAGGGGAAACAAGGCGGCCATTGATCAAGACGAGTGTATTAAATGG 840 Query 861 CTTGATTCTAAAGAAGAAGGGTCGGTGCTATATGTTTGCCTTGGAAGTATATGCAATCTT 920 |||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||| Sbjct 841 CTTGATTCTAAAGAAGTAGGGTCAGTTCTATATGTTTGCCTTGGAAGTATATGCAATCTT 900 Query 921 CCTCTGTCTCAGCTCAAAGAGCTCGGCTTAGGCCTCGAGGAATCCCAAAGACCTTTCATT 980 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 901 CCTCTGTCTCAGCTCAAAGAGCTCGGGTTAGGCCTCGAGGAATCCCAAAGGCCTTTCATT 960 Query 981 TGGGTCATAAGAGGTTGGGAGAAGTATAACGAGTTACTTGAATGGATCTCAGAGAGCGGT 1040 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct 961 TGGGTCATAAGAGGTTGGGAGAAGTATAACGAGTTATTTGAGTGGATCTCAGAGAGCGGT 1020 Query 1041 TATAAGGAAAGAATCAAAGAAAGAGGCCTTCTCATAACAGGATGGTCGCCTCAAATGCTT 1100 | |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct 1021 TTTAAGGAAAGAATCAAAGAGAGAGGCCTTCTCATAAGAGGATGGTCGCCTCAAATGCTT 1080 Query 1101 ATCCTTACACATCCTGCCGTTGGAGGATTCTTGACACATTGTGGATGGAACTCTACTCTT 1160 |||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1081 ATCCTTTCACACCCTGCCGTTGGAGGATTCTTGACACATTGTGGATGGAACTCGACTCTT 1140 Query 1161 GAAGGAATCACTTCAGGCGTTCCATTACTCACGTGGCCACTGTTTGGAGACCAATTCTGC 1220 |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||| Sbjct 1141 GAAGGAATCACTTCAGGCGTTCCATTGCTCACTTGGCCATTATTTGGAGACCAATTCTGC 1200 Query 1221 AATGAGAAATTGGCGGTGCAGATACTAAAAGCCGGTGTGAGAGCTGGGGTTGAAGAGTCC 1280 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 1201 AATGAGAAATTGGCGGTGCAGATACTAAAAGCCGGTGTGAGAGCCGGGGTTGAGGAGTCC 1260 Query 1281 ATGAGATGGGGAGAAGAGGAGAAAATAGGAGTACTGGTGGATAAAGAAGGAGTAAAGAAG 1340 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 1261 ATGAGATGGGGAGAAGAGGAGAACGTAGGAGTATTGGTGGATAAAGAAGGAGTAAAGAAG 1320 Query 1341 GCAGTGGAGGAATTGATGGGTGATAGTAATGATGCTAAGGAGAGAAGAAAAAGAGTGAAA 1400 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1321 GCAGTGGAAGAATTGATGGGTGATAGTAATGATGCTAAGGAGAGAAGAAAAAGAGTCAAA 1380 Query 1401 GAGCTTGGAGAATTAGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCCAACATC 1460 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1381 GAGCTTGGAGAATTAGCTCACAAGGCTGTGGAGGAAGGAGGCTCTTCTCATTCCAACATC 1440 Query 1461 ACATTCTTGCTACAAGACATAATGCAATTAGAACAACCCAAGAAATGATTGTAACTTTTC 1520 ||||| |||||||||||||||| ||| ||| | || |||||||||||||||||| |||| Sbjct 1441 ACATTATTGCTACAAGACATAACACAACTAGCAGAATCCAAGAAATGATTGTAACATTTC 1500 Query 1521 TTA 1523 ||| Sbjct 1501 TTA 1503 > Ahg482660 jgi|Araly1|482660|fgenesh2_kg.4__1720__AT2G36800.1 Length=1552 Score = 1166 bits (631), Expect = 0.0 Identities = 1214/1490 (81%), Gaps = 62/1490 (4%) Strand=Plus/Plus Query 53 TCCTCTTCATTTTGTTCTCTTCCCTTTCATGGCTCAAGGCCACATGA-TCCCAATGGTAG 111 ||| ||||| |||||||| |||||||||||||||||||||||||||| |||| ||||| | Sbjct 63 TCCACTTCACTTTGTTCTTTTCCCTTTCATGGCTCAAGGCCACATGATTCCC-ATGGTTG 121 Query 112 ATATTGCAAGGCTCCTGGCTCAGCGCGGGGTGACTATAACCATTGTCACTACACCTCAAA 171 |||||||||||||| ||||||||||||| |||| |||||| |||||||| || ||||| | Sbjct 122 ATATTGCAAGGCTCTTGGCTCAGCGCGGTGTGATTATAACAATTGTCACGACGCCTCACA 181 Query 172 ACGCAGGC-CGGTTCAAGAACGTTCTTAGCCGGGCTATCCAATCCGGCTTGCCCATCAAT 230 | ||| || |||||||||| || || | ||| || || | || |||||||||||||| Sbjct 182 ATGCA-GCGAGGTTCAAGAATGTCCTAAACCGAGCCATTGAGTCTGGCTTGCCCATCAAC 240 Query 231 CTCGTGCAAGTAAAGTTTCCATCTCAAGAATCGGGTTCACCGGAAGGACAGGAGAATTTG 290 || |||||||| |||||||||| ||||||| | |||| | |||||||| |||||| | Sbjct 241 CTAGTGCAAGTCAAGTTTCCATATCAAGAAGCTGGTTTGCAAGAAGGACAAGAGAATATC 300 Query 291 GACTTGCTC--GATTCATTGG-G-GGCTTCATTAACCTTCTTCAAAGCATTTAGCCTGCT 346 || || ||| || || ||| | || | | || | ||||| ||||| ||| | |||| Sbjct 301 GA-TT-CTCTTGAGACAATGGAGAGG-ATGA-TATCTTTCTTTAAAGCGGTTAACTTGCT 356 Query 347 CGAGGAACCAGTCGAGAAGCTC-TTGAAAGAGATTCAA-CCTAGGCCAAACTG-CATAAT 403 ||| ||||||||| |||||||| ||| |||||| | || ||| | |||| ||| | |||| Sbjct 357 CGAAGAACCAGTCCAGAAGCTCATTG-AAGAGA-TGAACCCTCGACCAAGCTGTC-TAAT 413 Query 404 CGCTGACATGTGTTTGCCTTATACAAACAGAAT-TGCCAAGAATCTT-GGTATACCAAAA 461 |||| | |||||||||||||||| || ||| | ||||||| || ||| ||||| Sbjct 414 TTCTGATTTCTGTTTGCCTTATACAAGCAAAATCT-CCAAGAA-GTTCAATATCCCAAAG 471 Query 462 ATCATCTTTCATGGCATGTGTTGCTTCAATCTTCTTTGTACGCACATAATGCAC-CAA-A 519 ||| |||| ||||||||| ||||||| |||||| |||| | ||| | || ||| | Sbjct 472 ATCCTCTTCCATGGCATGGGTTGCTTTTGTCTTCTGTGTATG--CATGTTTTACGCAAGA 529 Query 520 ACCACGAGTTCTTGGA-AACTATAGAGTCTGACAAGGAATACTTCCCCATTCCTAATTTC 578 ||| ||| ||||||| || | || ||||||| ||||| || ||| | ||||| |||| Sbjct 530 ACCGTGAGATCTTGGACAA-TTTAAAGTCTGATAAGGAGTATTTCACTGTTCCTTATTTT 588 Query 579 CCTGACAGAGTTGAGTTCACAAAATCTC-AGCTTCCAAT-GGTA-TTA-GTT---GCTGG 631 |||||||||||||| ||||||| | ||| || |||| | | | || ||| ||||| Sbjct 589 CCTGACAGAGTTGAATTCACAAGACCTCAAG-TTCCGGTAGAAACATATGTTCCAGCTGG 647 Query 632 AGATTGGAAAGACTTCCTT-GACGGAATGACAGAAGGGGATAACACTTCTTATGGTGTGA 690 ||| |||||||| | ||| || || ||| ||||| | || | || ||||||||||||| Sbjct 648 AGACTGGAAAGAGAT-CTTCGATGGTATGGTAGAAGCGAATGAGACATCTTATGGTGTGA 706 Query 691 TTGTTAACACGTTTGAAGAGCTCGAGCCAGCTTATGTTAGAGACTACAAGAAGGTTAAAG 750 | || ||| | ||| ||||||||||||| ||||||| | |||||||||| ||| ||| | Sbjct 707 TAGTCAACTCATTTCAAGAGCTCGAGCCTGCTTATGCCAAAGACTACAAGGAGG-TAAGG 765 Query 751 -CGGGT-AAGATATGGAGCATCGGACCGGTTTCCTTGTGCAACAAGTTAGGAGAAGACCA 808 | ||| ||| ||||| ||| ||||| |||||||||||||||||| |||||| |||| | Sbjct 766 TCCGGTAAAG-CATGGACCATTGGACCAGTTTCCTTGTGCAACAAGGTAGGAGCAGACAA 824 Query 809 AGCTGAGAGGGGAAACAAGGCGGACATTGATCAAGACGAGTGTATTAAATGGCTTGATTC 868 ||| |||||||||||||| | |||||||||||||| ||||| |||||||||| ||||| Sbjct 825 AGCAGAGAGGGGAAACAAATCAGACATTGATCAAGATGAGTGCCTTAAATGGCTCGATTC 884 Query 869 TAAAGAAGAAGGG-TCGGTGCTATATGTTTGCCTTGGAAGTATATGCAATCTTCCTCTGT 927 ||| ||| ||| | ||||| || ||||||||||||||||| |||||||||||||||| Sbjct 885 TAAGGAA-CCGGGCACTGTGCTCTACGTTTGCCTTGGAAGTATCTGCAATCTTCCTCTGT 943 Query 928 CTCAGCTCAAAGAGCT-CGGCTTAGGCCTCGAGGAATCCCAAAGACCTTTCATTTGGGTC 986 |||||||||| ||||| ||| |||| ||||||||||| |||||||||||||| |||||| Sbjct 944 CTCAGCTCAAGGAGCTGGGGC-TAGGGCTCGAGGAATCTCAAAGACCTTTCATCTGGGTC 1002 Query 987 ATAAGAGGTTGGGAGAAGTATAACGAGTTACTTGAATGGATCTCAGAGAGCGG-TTAT-A 1044 |||||||||||||| ||||| || |||||| |||| ||| |||| || ||||| || | | Sbjct 1003 ATAAGAGGTTGGGAAAAGTACAAAGAGTTAGTTGAGTGGTTCTCGGAAAGCGGATT-TGA 1061 Query 1045 AGGAAAGAATCAAAGAAAGAGGCCTTCTCAT-AACAGGATGGTCGCCTCAAATGCTTATC 1103 | || ||||||||||| ||||| |||||||| || ||||||||| ||||||||||||||| Sbjct 1062 A-GATAGAATCAAAGACAGAGGACTTCTCATCAA-AGGATGGTCTCCTCAAATGCTTATC 1119 Query 1104 CTTACACATCCTGCCGTTGGAGGATTCTTGACACATTGTGGATGGAACTCTACTCTTGAA 1163 ||| |||||| | | |||||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 1120 CTTTCACATCTTTCTGTTGGAGGGTTCTTAACGCATTGCGGATGGAACTCGACTCTTGAG 1179 Query 1164 GGAATCACTTCAGG-CGTTCC-ATTACTCACGTGGCCACTGTTTGGAGACCAATTCTGCA 1221 || || || | || | | || || || || ||||| || |||| |||||||||||||| Sbjct 1180 GGGATAACCGCTGGTC-TACCGCTT-CTTACATGGCCGCTATTTGCAGACCAATTCTGCA 1237 Query 1222 ATGAGAAATTGG-CGGTGCAGATACTAAAAGCCGGTGTGAGAGCTGGGGTTGAAG-AGTC 1279 | |||||| ||| | || ||| |||||||||||||||| ||| | ||||||| || || | Sbjct 1238 ACGAGAAACTGGTC-GTTCAGGTACTAAAAGCCGGTGTAAGATCCGGGGTTG-AGCAG-C 1294 Query 1280 C-ATGAGATGGGGAGAAGAGGAGAAAATAGGAGTACTGGTGGATAAAGAAGGAGTAAAGA 1338 | |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct 1295 CTATGAAATGGGGAGAAGAGGAGAAAATAGGAGTGTTGGTGGATAAAGAAGGAGTGAAGA 1354 Query 1339 AGGCAGTGGAGGAATTGATGGGTGATAGTAATGATGCTAAGGAGAGAAGAAAAAGAGTGA 1398 | |||||||| ||||| |||||||| ||| ||||||| || |||||||||| ||||| | Sbjct 1355 ACGCAGTGGAAGAATTAATGGGTGAGAGTGATGATGCAAAAGAGAGAAGAAGAAGAGCCA 1414 Query 1399 AAGAGCTTGGAGAATTAGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCCAACA 1458 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1415 AAGAGCTTGGAGATTTAGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCTAACA 1474 Query 1459 TCACATTCTTGCTACAAGACATAATGCAATTAGAACAACCCAAGAAATGA 1508 || |||||||||||||||||||||||||| ||| |||| |||| || ||| Sbjct 1475 TCTCATTCTTGCTACAAGACATAATGCAACTAGCACAATCCAATAATTGA 1524 > Ahg934312 jgi|Araly1|934312|scaffold_402300.1 Length=1535 Score = 1081 bits (585), Expect = 0.0 Identities = 1205/1500 (80%), Gaps = 59/1500 (4%) Strand=Plus/Plus Query 45 TTTCGTCCTCCTCTTCATTTTGTTCTCTTCCCTTTCATGGCTCAAGGCCACATGA-TCCC 103 |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct 48 TTTCATCCTTCTCTTCACTTTGTTCTCTTCCCTTTCATGGCTCAAGGCCACATGATTCCC 107 Query 104 AATGGTAGATATTGCAAGGCTCCTGGCTCAGCGCGGGGTGACTATAACCATTGTCACTAC 163 ||| | |||||| ||||||| ||||||||||| | ||||| ||||| |||||||| || Sbjct 108 -ATGATTGATATTTCAAGGCTTTTGGCTCAGCGCAGTGTGACCATAACAATTGTCACGAC 166 Query 164 ACCTCAAAACGCAGGC-CGGTTCAAGAACGTTCTTAGCCGGGCTATCCAATCCGGCTTGC 222 ||||| |||||| || |||| ||||| || || ||||| || || | || ||||||| Sbjct 167 GCCTCACAACGCA-GCAAGGTTTAAGAATGTCCTAAGCCGTGCAATAGAGTCGGGCTTGC 225 Query 223 CCATCAATCTCGTGCAAGTAAAGTTTCCATCTCAAGAATCGGGTTCACCGGAAGGACAGG 282 ||||||| || ||||| || |||||||||| ||||||| | |||| | |||||||| | Sbjct 226 CCATCAAACTGGTGCATGTGAAGTTTCCATATCAAGAAGCTGGTTTGCAAGAAGGACAAG 285 Query 283 AGAATTTGGACTT-GCTCGATTCATTGGGGGCTTCAT--TAACC-TTCTTCAAAGCATTT 338 ||||| | || || | | || ||| || | || || | ||| || || ||||| | Sbjct 286 AGAATATAGA-TTCGTTAGACTCA-AAGGAG-TTGATGGT-ACCTTTTTTTAAAGCGGTG 341 Query 339 AGCCTGCTCGAGGAACCAGTCGA-GAAGCTCTTGAAAGAGATTCAACCTAGGCCAAACTG 397 | |||| || || || ||| | ||||||| || ||||||| |||||| || | ||| Sbjct 342 AAAATGCTTGAAGAGCCGGTC-ACGAAGCTCATGGAAGAGATGAAACCTAAACCTAGCTG 400 Query 398 -CATAATCGCTGACAT-GTGTTTGCCTTATACAAACAGAATTGCCAAG-AATCTTGGTAT 454 | |||| |||| | ||||||||||||||||| || ||| |||||| ||| | ||| Sbjct 401 TC-TAATTTCTGA-TTGGTGTTTGCCTTATACAAGCATAATCGCCAAGAAAT-TCAATAT 457 Query 455 ACCAAAAATCA-TCTTT-CATGGCATGTGTTGCTTCAATCTTCTT-TGTACGCACATAAT 511 |||||| || | | ||| || |||||| |||| || |||| || |||| ||| | | Sbjct 458 ACCAAAGAT-AGT-TTTCCACGGCATGGGTTGTTTTTGTCTT-TTGTGTATGCATGTTCT 514 Query 512 GCACCAAAACC-ACGAG-TTCTTGGAAACTATAGAGTCTGACAAGGAATACTTCCCCATT 569 | |||||||| | ||| | || || || | || |||| || || || || || | || Sbjct 515 ACGCCAAAACCTA-GAGATCCTAGGGAA-TGTAAAGTCAGATAATGAGTATTTACTGGTT 572 Query 570 CCTAATTTCCCTGACAGAGTTGAGTTCACAAAATCTCAGCTTCCAATGGTATTAGTTGC- 628 ||| ||| ||||| | |||||| || ||||| |||| ||||| || | | ||| Sbjct 573 CCTTGTTTTCCTGATAAAGTTGAATTTACAAAGCCTCAACTTCCTGTGAAAGCAAATGCA 632 Query 629 --TGGAGATTGGAAAGACTTCCTTGACGGAATGACAGAAG-GGGATAACACTTCTTATGG 685 ||||||||||||||| || | |||| |||| | ||| | || |||| || ||||| Sbjct 633 AGTGGAGATTGGAAAGAGATCATGGACGAAATGGTAAAAGCAGAAT-ACACATCATATGG 691 Query 686 TGTGATTGTTAACACGTTTGAAGAGCTCGAGCCAGCTTATGTTAGAGACTAC-AAGAAGG 744 |||| | || ||||| || |||||| | ||||| |||||||| | ||||||| ||| ||| Sbjct 692 TGTGGTAGTCAACACATTCGAAGAGTTGGAGCCTGCTTATGTCAAAGACTACAAAG-AGG 750 Query 745 TTAA-AGC-GGGTAAGATATGGAGCATCGGACCGGTTTCCTTGTGCAACAAGTTAGGAGA 802 || || || ||| ||||| ||| ||||| |||||||||||||||||| |||||| Sbjct 751 -CAAGGGCTGGAAAAG-TATGGTCCATTGGACCAGTTTCCTTGTGCAACAAGGTAGGAGC 808 Query 803 AGACCAAGCTGAGAGGGGAAACAAGGCGGAC-ATTGATCAAGACGAGTGTATTAAATGGC 861 |||| |||| |||||||| ||||| |||| | ||||||||||| |||||| ||||||||| Sbjct 809 AGACAAAGCAGAGAGGGGTAACAAAGCGG-CTATTGATCAAGATGAGTGTCTTAAATGGC 867 Query 862 TTGATTCTAAAGAAGAAGGGTCGGTGCTATATGTTTGCCTTGGAAGTATATGCAATCTTC 921 ||||||||||||||||||| |||||||| |||| ||||||||||||||| |||||||||| Sbjct 868 TTGATTCTAAAGAAGAAGGTTCGGTGCTCTATGCTTGCCTTGGAAGTATCTGCAATCTTC 927 Query 922 CTCTGTCTCAGCTCAAAGAGCT-CGGCTTAGGCCTCGAGGAATCCCAAAGACCTTTCATT 980 || || |||||||||| ||| | ||| ||||||| |||||||||| ||||||||| ||| Sbjct 928 CTTTGGCTCAGCTCAAGGAGTTGGGGC-TAGGCCTTGAGGAATCCCGAAGACCTTTTATT 986 Query 981 TGGGTCATAAGAGGTTGGGAGAAGTATAACGAGTTACT-TGAATGGATCTCAGAGAGCGG 1039 |||||||||||||||||||| ||||| || || || | ||| ||||| | |||||||| Sbjct 987 TGGGTCATAAGAGGTTGGGAAAAGTACAATGAACTA-TCTGAGTGGATGTTGGAGAGCGG 1045 Query 1040 TTAT-AAGGAAAGAATCAAAGAAAGAGGCCTTCTCATAACAGGATGGTCGCCTCAAATGC 1098 || | || |||||||||||||| ||||| |||||||| | ||| ||| | || ||| | | Sbjct 1046 TTTTCAA-GAAAGAATCAAAGAGAGAGGACTTCTCATTAGAGGGTGGGCACCACAAGTCC 1104 Query 1099 TTATCCTTACACATCCTGCCGTTGGAGGATTCTTGACACATTGTGGATGGAACTCTACTC 1158 |||||||| |||||||| |||||||||||||||||||||| ||||||||||| || |||| Sbjct 1105 TTATCCTTTCACATCCTTCCGTTGGAGGATTCTTGACACACTGTGGATGGAATTCGACTC 1164 Query 1159 TTGAAGGAATCACTTCAGGCGTTCCA-TTACTCACGTGGCCACTGTTTGGAGACCAATTC 1217 | ||||||||||| || ||| ||||| || ||||| ||||| ||||||| |||||||||| Sbjct 1165 TCGAAGGAATCACCTCGGGCATTCCACTT-CTCACATGGCCGCTGTTTGCAGACCAATTC 1223 Query 1218 TGCAATGAGAAA-TTGGCGGTGCAGATACTAAAAGCCGGTGTGAGAGCTGGGGTTGAAG- 1275 || || |||||| | | | |||||| ||||||||||||||| ||||| || |||| || Sbjct 1224 TGTAACGAGAAACTAGTC-GTGCAGGTACTAAAAGCCGGTGCAAGAGCCGGAGTTG-AGC 1281 Query 1276 AGTCC-ATGAGATGGGGAGAAGAGGAGAAAATAGGAGTACTGGTGGATAAAGAAGGAGTA 1334 || || |||| || |||||||||||||||||||||||| | ||||||||||||||||| Sbjct 1282 AG-CCTATGAAATCGGGAGAAGAGGAGAAAATAGGAGTGTTAGTGGATAAAGAAGGAGTG 1340 Query 1335 AAGAAGGCAGTGGAGGAATTGATGGGTGATAGTAATGATGCTAAGGAGAGAAGAAAAAGA 1394 ||||| |||||||| ||||| |||||| ||||| ||||||| || ||||| |||| |||| Sbjct 1341 AAGAAAGCAGTGGAAGAATTAATGGGTAATAGTGATGATGCAAAAGAGAGGAGAAGAAGA 1400 Query 1395 GTGAAAGAGCTTGGAGAATTAGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCC 1454 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1401 GTCAAAGAGCTTGGAGAATTAGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCT 1460 Query 1455 AACATCACATTCTTGCTACAAGACATAATGCAATTAGAACAAC-CCAAGAAATGATTGTA 1513 |||||| |||||||||||||||||||| ||||| ||| || | ||||||| |||||||| Sbjct 1461 AACATCTCATTCTTGCTACAAGACATAGTGCAACTAGTGCA-CTCCAAGAATTGATTGTA 1519 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59077969995 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5