BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G36780.1
Length=1665
Score E
Sequences producing significant alignments: (Bits) Value
Ahg934312 jgi|Araly1|934312|scaffold_402300.1 2078 0.0
Ahg482660 jgi|Araly1|482660|fgenesh2_kg.4__1720__AT2G36800.1 1506 0.0
Ahg482658 jgi|Araly1|482658|fgenesh2_kg.4__1718__AT2G36750.1 1125 0.0
> Ahg934312 jgi|Araly1|934312|scaffold_402300.1
Length=1535
Score = 2078 bits (1125), Expect = 0.0
Identities = 1396/1526 (91%), Gaps = 21/1526 (1%)
Strand=Plus/Plus
Query 21 TTCCTCATTGAGTCGTTGCAAACGGTATGGCTACGGAAAAAACCCACCAATTTCATCCTT 80
||||||||||| |||| || || ||||||| | ||| |||||||||| ||||||||||
Sbjct 1 TTCCTCATTGA---GTTGGAACCGTTATGGCTTCCGAAGAAACCCACCAGTTTCATCCTT 57
Query 81 CTCTTCACTTTGTCCTCTTCCCTTTCATGGCTCAAGGCCACATGATTCCCATGATTGATA 140
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 58 CTCTTCACTTTGTTCTCTTCCCTTTCATGGCTCAAGGCCACATGATTCCCATGATTGATA 117
Query 141 TTGCAAGACTCTTGGCTCAGCGTGGTGTGACCATAACAATTGTCACGACACCTCACAACG 200
|| |||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct 118 TTTCAAGGCTTTTGGCTCAGCGCAGTGTGACCATAACAATTGTCACGACGCCTCACAACG 177
Query 201 CAGCAAGGTTTAAGAATGTCCTAAACCGAGCGATCGAGTCTGGCTTGGCCATC-AACATA 259
|||||||||||||||||||||||| ||| || || ||||| |||||| ||||| ||| |
Sbjct 178 CAGCAAGGTTTAAGAATGTCCTAAGCCGTGCAATAGAGTCGGGCTTGCCCATCAAAC-TG 236
Query 260 CTGCATGTGAAGTTTCCATATCAAG-AGTTTGGTTTGCCAGAAGGAAAAGAGAATATAGA 318
|||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||
Sbjct 237 GTGCATGTGAAGTTTCCATATCAAGAAG-CTGGTTTGCAAGAAGGACAAGAGAATATAGA 295
Query 319 TTCGTTAGACTCAACGGAGTTGATGGTACCTTTCTTCAAAGCGGTGAACTTGCTTGAAGA 378
|||||||||||||| |||||||||||||||||| || ||||||||||| ||||||||||
Sbjct 296 TTCGTTAGACTCAAAGGAGTTGATGGTACCTTTTTTTAAAGCGGTGAAAATGCTTGAAGA 355
Query 379 TCCGGTCATGAAGCTCATGGAAGAGATGAAACCTAGACCTAGCTGTCTAATTTCTGATTG 438
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 356 GCCGGTCACGAAGCTCATGGAAGAGATGAAACCTAAACCTAGCTGTCTAATTTCTGATTG 415
Query 439 GTGTTTGCCTTATACAAGCATAATCGCCAAGAACTTCAATATACCAAAGATAGTTTTCCA 498
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 416 GTGTTTGCCTTATACAAGCATAATCGCCAAGAAATTCAATATACCAAAGATAGTTTTCCA 475
Query 499 CGGCATGGGTTGCTTTAATCTTTTGTGTATGCATGTTCTACG-CAGAAACTTAGAGATCC 557
|||||||||||| ||| |||||||||||||||||||||||| || |||| |||||||||
Sbjct 476 CGGCATGGGTTGTTTTTGTCTTTTGTGTATGCATGTTCTACGCCA-AAACCTAGAGATCC 534
Query 558 TAGAGAATGTAAAGTCGGATGAA-GAGTATTT-CTTGGTTCCTAGTTTTCCTGATAGAGT 615
||| |||||||||||| ||| || |||||||| | |||||||| |||||||||||| |||
Sbjct 535 TAGGGAATGTAAAGTCAGAT-AATGAGTATTTAC-TGGTTCCTTGTTTTCCTGATAAAGT 592
Query 616 TGAATTTACAAAGCTTCAACTTCCTGTGAAAGCAAATGCAAGTGGAGATTGGAAAGAGAT 675
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGAATTTACAAAGCCTCAACTTCCTGTGAAAGCAAATGCAAGTGGAGATTGGAAAGAGAT 652
Query 676 AATGGATGAAATGGTAAAAGCAGAATACACATCCTATGGTGTGATCGTCAACACATTTC- 734
||||| |||||||||||||||||||||||||| ||||||||| | ||||||||| |||
Sbjct 653 CATGGACGAAATGGTAAAAGCAGAATACACATCATATGGTGTGGTAGTCAACACA-TTCG 711
Query 735 AGGAGTTGGAGCCACCTTATGTCAAAGACTACAAAGAGGCAATGGATGGAAAAGTATGGT 794
| ||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 712 AAGAGTTGGAGCCTGCTTATGTCAAAGACTACAAAGAGGCAAGGGCTGGAAAAGTATGGT 771
Query 795 CCATTGGACCCGTTTCCTTGTGTAACAAGGCAGGTGCAGACAAAGCTGAGAGGGG-AAGC 853
|||||||||| ||||||||||| ||||||| ||| ||||||||||| |||||||| || |
Sbjct 772 CCATTGGACCAGTTTCCTTGTGCAACAAGGTAGGAGCAGACAAAGCAGAGAGGGGTAA-C 830
Query 854 AAGGCCGCCATTGATCAAGATGAGTGTCTTCAATGGCTTGATTCTAAAGAAGAAGGTTCG 913
|| || || ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 831 AAAGCGGCTATTGATCAAGATGAGTGTCTTAAATGGCTTGATTCTAAAGAAGAAGGTTCG 890
Query 914 GTGCTCTATGTTTGCCTTGGAAGTATATGTAATCTTCCTTTGTCTCAGCTCAAGGAGCTG 973
|||||||||| ||||||||||||||| || |||||||||||| |||||||||||||| ||
Sbjct 891 GTGCTCTATGCTTGCCTTGGAAGTATCTGCAATCTTCCTTTGGCTCAGCTCAAGGAGTTG 950
Query 974 GGGCTAGGCCTTGAGGAATCTCGAAGATCTTTTATTTGGGTCATAAGAGGTTCGGAAAAG 1033
|||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||
Sbjct 951 GGGCTAGGCCTTGAGGAATCCCGAAGACCTTTTATTTGGGTCATAAGAGGTTGGGAAAAG 1010
Query 1034 TATAAAGAACTATTTGAGTGGATGTTGGAGAGCGGTTTTGAAGAAAGAATCAAAGAGAGA 1093
|| || ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1011 TACAATGAACTATCTGAGTGGATGTTGGAGAGCGGTTTTCAAGAAAGAATCAAAGAGAGA 1070
Query 1094 GGACTTCTCATTAAAGGGTGGGCACCTCAAGTCCTTATCCTTTCACATCCTTCCGTTGGA 1153
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1071 GGACTTCTCATTAGAGGGTGGGCACCACAAGTCCTTATCCTTTCACATCCTTCCGTTGGA 1130
Query 1154 GGATTCCTGACACACTGTGGATGGAACTCGACTCTCGAAGGAATCACCTCAGGCATTCCA 1213
|||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 1131 GGATTCTTGACACACTGTGGATGGAATTCGACTCTCGAAGGAATCACCTCGGGCATTCCA 1190
Query 1214 CTGATCACTTGGCCGCTGTTTGGAGACCAATTCTGCAACCAAAAACTGGTCGTTCAAGTA 1273
|| |||| ||||||||||||| |||||||||||| ||| | ||||| ||||| || |||
Sbjct 1191 CTTCTCACATGGCCGCTGTTTGCAGACCAATTCTGTAACGAGAAACTAGTCGTGCAGGTA 1250
Query 1274 CTAAAAGCCGGTGTAAGTGCCGGGGTTGAAGAAGTC-ATGAAATGGGGAGAAGAAGATAA 1332
||||||||||||| ||| ||||| |||| || || | ||||||| ||||||||| || ||
Sbjct 1251 CTAAAAGCCGGTGCAAGAGCCGGAGTTG-AGCAGCCTATGAAATCGGGAGAAGAGGAGAA 1309
Query 1333 AATAGGAGTGTTAGTGGATAAAGAAGGAGTGAA-AAAGGCTGTGGAAGAATTGATGGGTG 1391
||||||||||||||||||||||||||||||||| ||| || ||||||||||| ||||||
Sbjct 1310 AATAGGAGTGTTAGTGGATAAAGAAGGAGTGAAGAAA-GCAGTGGAAGAATTAATGGGTA 1368
Query 1392 ATAGTGATGATGCAAAAGAGAGGAGAAGAAGAGTCAAAGAGCTTGGAGAATTAGCTCACA 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1369 ATAGTGATGATGCAAAAGAGAGGAGAAGAAGAGTCAAAGAGCTTGGAGAATTAGCTCACA 1428
Query 1452 AAGCTGTGGAAAAAGGAGGCTCTTCTCATTCTAACATCACACTCTTGCTACAAGACATAA 1511
| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1429 AGGCTGTGGAAGAAGGAGGCTCTTCTCATTCTAACATCTCATTCTTGCTACAAGACATAG 1488
Query 1512 TGCAACTAGCACAATTCAAGAATTGA 1537
||||||||| || | ||||||||||
Sbjct 1489 TGCAACTAGTGCACTCCAAGAATTGA 1514
> Ahg482660 jgi|Araly1|482660|fgenesh2_kg.4__1720__AT2G36800.1
Length=1552
Score = 1506 bits (815), Expect = 0.0
Identities = 1267/1484 (85%), Gaps = 35/1484 (2%)
Strand=Plus/Plus
Query 83 CTTCACTTTGTCCTCTTCCCTTTCATGGCTCAAGGCCACATGATTCCCATGATTGATATT 142
||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 67 CTTCACTTTGTTCTTTTCCCTTTCATGGCTCAAGGCCACATGATTCCCATGGTTGATATT 126
Query 143 GCAAGACTCTTGGCTCAGCGTGGTGTGACCATAACAATTGTCACGACACCTCACAACGCA 202
||||| |||||||||||||| ||||||| ||||||||||||||||| |||||||| |||
Sbjct 127 GCAAGGCTCTTGGCTCAGCGCGGTGTGATTATAACAATTGTCACGACGCCTCACAATGCA 186
Query 203 GCAAGGTTTAAGAATGTCCTAAACCGAGCGATCGAGTCTGGCTTGGCCATCAACATACTG 262
|| ||||| |||||||||||||||||||| || |||||||||||| |||||||| || ||
Sbjct 187 GCGAGGTTCAAGAATGTCCTAAACCGAGCCATTGAGTCTGGCTTGCCCATCAACCTAGTG 246
Query 263 CATGTGAAGTTTCCATATCAAGA-GTTTGGTTTGCCAGAAGGAAAAGAGAATATAGATTC 321
|| || ||||||||||||||||| | | ||||||| ||||||| |||||||||| |||||
Sbjct 247 CAAGTCAAGTTTCCATATCAAGAAGCT-GGTTTGCAAGAAGGACAAGAGAATATCGATTC 305
Query 322 G-TT-AGACTCAACGGAGTTGATGGTACCTTTCTTCAAAGCGGTGAACTTGCTTGAAGAT 379
|| |||| || |||| |||| || ||||||| |||||||| |||||||| |||||
Sbjct 306 TCTTGAGAC--AATGGAGAGGATGATATCTTTCTTTAAAGCGGTTAACTTGCTCGAAGAA 363
Query 380 CCGGTC-ATGAAGCTCATGGAAGAGATGAAACCTAGACCTAGCTGTCTAATTTCTGATTG 438
|| ||| | ||||||||| ||||||||||| ||| |||| |||||||||||||||||||
Sbjct 364 CCAGTCCA-GAAGCTCATTGAAGAGATGAACCCTCGACCAAGCTGTCTAATTTCTGATTT 422
Query 439 GTGTTTGCCTTATACAAGCATAATCGCCAAGAACTTCAATATACCAAAGATAGTTTTCCA 498
||||||||||||||||||| |||| ||||||| |||||||| |||||||| | |||||
Sbjct 423 CTGTTTGCCTTATACAAGCAAAATCTCCAAGAAGTTCAATATCCCAAAGATCCTCTTCCA 482
Query 499 CGGCATGGGTTGCTTTAATCTTTTGTGTATGCATGTTCTACGCA-GAAACTTAGAGATCC 557
||||||||||||||| |||| |||||||||||||| |||||| ||| | | ||||||
Sbjct 483 TGGCATGGGTTGCTTTTGTCTTCTGTGTATGCATGTTTTACGCAAGAACCGT-GAGATCT 541
Query 558 TAGAGAATGTAAAGTCGGATGAAG-AGTATTTCT-TGGTTCCT-AGTTTTCCTGATAGAG 614
| || ||| ||||||| ||| ||| |||||||| || ||||| | ||||||||| ||||
Sbjct 542 TGGACAATTTAAAGTCTGAT-AAGGAGTATTTCACTG-TTCCTTA-TTTTCCTGACAGAG 598
Query 615 TTGAATTTACAA-AGCTTCAACTTCCTGT-GAAAGCAAATG--CAAG-TGGAGATTGGAA 669
||||||| |||| | || ||| |||| || |||| || ||| | || |||||| |||||
Sbjct 599 TTGAATTCACAAGACCT-CAAGTTCCGGTAGAAA-CATATGTTCCAGCTGGAGACTGGAA 656
Query 670 AGAGATAATGGATGAAATGGTAAAAGCAGAAT-ACACATCCTATGGTGTGATCGTCAACA 728
|||||| | |||| |||||| |||| |||| | ||||| ||||||||||| ||||||
Sbjct 657 AGAGATCTTCGATGGTATGGTAGAAGC-GAATGAGACATCTTATGGTGTGATAGTCAACT 715
Query 729 CATTTCAGGAGTTGGAGCCACCTTATGTCAAAGACTACAAAGAGGCAATGGAT--GGAAA 786
||||||| ||| | ||||| |||||| |||||||||||| |||| || || | || ||
Sbjct 716 CATTTCAAGAGCTCGAGCCTGCTTATGCCAAAGACTACAAGGAGGTAA-GG-TCCGGTAA 773
Query 787 AGTATGGTCCATTGGACCCGTTTCCTTGTGTAACAAGGCAGGTGCAGACAAAGCTGAGAG 846
|| |||| |||||||||| ||||||||||| ||||||| ||| ||||||||||| |||||
Sbjct 774 AGCATGGACCATTGGACCAGTTTCCTTGTGCAACAAGGTAGGAGCAGACAAAGCAGAGAG 833
Query 847 GGGAAGCAAGGCCGCCATTGATCAAGATGAGTGTCTTCAATGGCTTGATTCTAAAGAAGA 906
||||| ||| | | |||||||||||||||||| ||| ||||||| |||||||| |||
Sbjct 834 GGGAAACAAATCAGACATTGATCAAGATGAGTGCCTTAAATGGCTCGATTCTAAGGAACC 893
Query 907 AGGTTCGGTGCTCTATGTTTGCCTTGGAAGTATATGTAATCTTCCTTTGTCTCAGCTCAA 966
|| | |||||||| ||||||||||||||||| || ||||||||| |||||||||||||
Sbjct 894 GGGCACTGTGCTCTACGTTTGCCTTGGAAGTATCTGCAATCTTCCTCTGTCTCAGCTCAA 953
Query 967 GGAGCTGGGGCTAGGCCTTGAGGAATCTCGAAGATCTTTTATTTGGGTCATAAGAGGTTC 1026
||||||||||||||| || |||||||||| |||| |||| || ||||||||||||||||
Sbjct 954 GGAGCTGGGGCTAGGGCTCGAGGAATCTCAAAGACCTTTCATCTGGGTCATAAGAGGTTG 1013
Query 1027 GGAAAAGTATAAAGAACTATTTGAGTGGATGTTGGAGAGCGGTTTTGAAGAAAGAATCAA 1086
||||||||| ||||| || |||||||| | | ||| ||||| |||||||| ||||||||
Sbjct 1014 GGAAAAGTACAAAGAGTTAGTTGAGTGGTTCTCGGAAAGCGGATTTGAAGATAGAATCAA 1073
Query 1087 AGAGAGAGGACTTCTCATTAAAGGGTGGGCACCTCAAGTCCTTATCCTTTCACATCCTTC 1146
||| |||||||||||||| ||||| ||| | |||||| | |||||||||||||||| |||
Sbjct 1074 AGACAGAGGACTTCTCATCAAAGGATGGTCTCCTCAAATGCTTATCCTTTCACATCTTTC 1133
Query 1147 CGTTGGAGGATTCCTGACACACTGTGGATGGAACTCGACTCTCGAAGGAATCACCTCAGG 1206
|||||||| ||| | || || || ||||||||||||||||| || || || ||| | ||
Sbjct 1134 TGTTGGAGGGTTCTTAACGCATTGCGGATGGAACTCGACTCTTGAGGGGATAACCGCTGG 1193
Query 1207 -CATTCCACTGATCACTTGGCCGCTGTTTGGAGACCAATTCTGCAACCAAAAACTGGTCG 1265
| | || || | || |||||||| |||| |||||||||||||||| | ||||||||||
Sbjct 1194 TC-TACCGCTTCTTACATGGCCGCTATTTGCAGACCAATTCTGCAACGAGAAACTGGTCG 1252
Query 1266 TTCAAGTACTAAAAGCCGGTGTAAG-TGCCGGGGTTGAAGAAGTC-ATGAAATGGGGAGA 1323
|||| |||||||||||||||||||| | |||||||||| | || | ||||||||||||||
Sbjct 1253 TTCAGGTACTAAAAGCCGGTGTAAGAT-CCGGGGTTGA-GCAGCCTATGAAATGGGGAGA 1310
Query 1324 AGAAGATAAAATAGGAGTGTTAGTGGATAAAGAAGGAGTGAAAAAGGCTGTGGAAGAATT 1383
||| || |||||||||||||| |||||||||||||||||||| || || |||||||||||
Sbjct 1311 AGAGGAGAAAATAGGAGTGTTGGTGGATAAAGAAGGAGTGAAGAACGCAGTGGAAGAATT 1370
Query 1384 GATGGGTGATAGTGATGATGCAAAAGAGAGGAGAAGAAGAGTCAAAGAGCTTGGAGAATT 1443
|||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct 1371 AATGGGTGAGAGTGATGATGCAAAAGAGAGAAGAAGAAGAGCCAAAGAGCTTGGAGATTT 1430
Query 1444 AGCTCACAAAGCTGTGGAAAAAGGAGGCTCTTCTCATTCTAACATCACACTCTTGCTACA 1503
||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||||||
Sbjct 1431 AGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCTAACATCTCATTCTTGCTACA 1490
Query 1504 AGACATAATGCAACTAGCACAATTCAAGAATTGAGCATATGTCA 1547
||||||||||||||||||||||| ||| ||||||| ||| ||||
Sbjct 1491 AGACATAATGCAACTAGCACAATCCAATAATTGAGTATACGTCA 1534
> Ahg482658 jgi|Araly1|482658|fgenesh2_kg.4__1718__AT2G36750.1
Length=1529
Score = 1125 bits (609), Expect = 0.0
Identities = 1212/1498 (81%), Gaps = 61/1498 (4%)
Strand=Plus/Plus
Query 69 AATTTCATCCTTCTCTTCACTTTGTCCTCTTCCCTTTCATGGCTCAAGGCCACATGATTC 128
|||||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||| |
Sbjct 23 AATTTCGTCCTCCTCTTCACTTTGTTCTCTTCCCTTTCATGGCTCAAGGTCACATGATCC 82
Query 129 CCATGATTGATATTGCAAGACTCTTGGCTCAGCGTGGTGTGACCATAACAATTGTCACGA 188
||||| | ||||||||||| |||||||||||||| || ||||| ||||| ||||||||||
Sbjct 83 CCATGGTGGATATTGCAAGGCTCTTGGCTCAGCGCGGGGTGACTATAACCATTGTCACGA 142
Query 189 CACCTCACAACGCA-GCAAGGTTTAAGAATGTCCTAAACCGAGCGATCGAGTCTGGCTTG 247
| |||||||||||| || |||| ||||| || | | ||| || ||| |||| ||||||
Sbjct 143 CGCCTCACAACGCAGGC-CGGTTCAAGAACGTTTTTAGCCGGGCCATCCAGTCCGGCTTG 201
Query 248 GCCATCAA-CATACTGCATGTGAAGTTTCCATATCAAGAGTTTGGTTTGCCAGAAGGAAA 306
||||||| | | |||| || |||||||||| |||||| | |||| || |||||| |
Sbjct 202 CCCATCAATC-TTGTGCAAGTAAAGTTTCCATCTCAAGAATCGGGTTCACCCGAAGGACA 260
Query 307 AGAGAATATAGA-TTCGTTAGACTC-AACGGAG-TTGATGGT-ACCTTTCTTCAAAGCGG 362
|||||| | || || | | || || || | | || | ||| |||||||||||
Sbjct 261 GGAGAATTTGGACTT-GCTGGATTCGTTGGGGGCGTCAT--TAACC-TTCTTCAAAGC-A 315
Query 363 T-GAACTTGCTTGAAGATCCGGTC-ATGAAGCTCATGGAAGAGATGAAACCTAGACCTAG 420
| | | ||||||| || |||||| | ||||||| || ||||||| ||||||| || ||
Sbjct 316 TCTAGCCTGCTTGAGGAACCGGTCGA-GAAGCTCTTGAAAGAGATTCAACCTAGGCCAAG 374
Query 421 CTGTC-TAATTTCTGA-TTGGTGTTTGCCTTATACAAGCATAATCGCCAAGAA-CTTCAA 477
||| | |||| | || | ||||||||||||||||| | ||| |||||||| |||
Sbjct 375 CTG-CATAATCGCCGACAT-GTGTTTGCCTTATACAAACCGAATTGCCAAGAATCTT-GG 431
Query 478 TATACCAAAGAT-AGT-TTTCCACGGCATGGGTTGCTTTAATCTT-TTGTGTATGCATGT 534
||||||||| || | | ||| || |||||| ||||||| |||||| || |||| ||| |
Sbjct 432 TATACCAAAAATCA-TCTTT-CATGGCATGTGTTGCTTCAATCTTCTT-TGTACGCACAT 488
Query 535 TCT--ACGCAGAAACTTA-GAGATCCTAGAGAA-TGTAAAGTCGGATGAA-GAGTATTTC 589
| | || || |||| || ||| | | || || | || |||| || || ||||| |||
Sbjct 489 TATGCAC-CA-AAAC-TACGAGTTATTGGA-AACTATAGAGTCTGA-AAAGGAGTACTTC 543
Query 590 TTGGTTCCTAGTTTTCCTGATAGAGTTGAATTTAC-AAAGCTTCAACTTCCTGTGAAAGC 648
| |||| | ||| ||||| ||||||| || || ||| | ||| ||||| ||
Sbjct 544 TCCATTCCAAATTTCCCTGACCGAGTTGAGTTCACAAAATC-TCAGCTTCCAATGGTTTT 602
Query 649 AAATGCAAGTGGAGATTGGAAAGAGATAATGGATGAAATGGTAAAAGCAGAAT-ACACAT 707
| ||| |||||||||||||||| | | || |||||| | |||| | || |||| |
Sbjct 603 AGTTGC---TGGAGATTGGAAAGAGTTTCTTGACGAAATGACAGAAGC-GGATAACACTT 658
Query 708 CCTATGGTGTGATCGTCAACACATTTCAGGAGTTGGAGCCACCTTATGTCAAAGACTACA 767
| | ||||||||| || ||||| ||| | ||| | |||||| ||||||| | |||||||
Sbjct 659 CTTTTGGTGTGATTGTTAACACGTTTGAAGAGCTCGAGCCAGCTTATGTTAGAGACTAC- 717
Query 768 AAG-AGG-CAATGGATGGAAAAGTATGGTCCATTGGACCCGTTTCCTTGTGTAACAAGGC 825
||| ||| || | || || |||||| ||| || || ||||||||||| |||||||
Sbjct 718 AAGAAGGTTAA-AGCCGGTAAGGTATGGAGCATCGGGCCGGTTTCCTTGTGCAACAAGGT 776
Query 826 AGGTGCAGACAAAGCTGAGAGGGGAAGCAAGGCCGCCATTGATCAAGATGAGTGTCTTCA 885
||| | |||||||||||||||||||| |||||| |||||||||||||| |||||| || |
Sbjct 777 AGGAGAAGACAAAGCTGAGAGGGGAAACAAGGCGGCCATTGATCAAGACGAGTGTATTAA 836
Query 886 ATGGCTTGATTCTAAAGAAGAAGGTTCGGTGCTCTATGTTTGCCTTGGAAGTATATGTAA 945
|||||||||||||||||||| ||| || || || ||||||||||||||||||||||| ||
Sbjct 837 ATGGCTTGATTCTAAAGAAGTAGGGTCAGTTCTATATGTTTGCCTTGGAAGTATATGCAA 896
Query 946 TCTTCCTTTGTCTCAGCTCAAGGAGCTGGGGCTAGGCCTTGAGGAATCTCGAAGATCTTT 1005
||||||| ||||||||||||| ||||| ||| ||||||| |||||||| | ||| ||||
Sbjct 897 TCTTCCTCTGTCTCAGCTCAAAGAGCTCGGGTTAGGCCTCGAGGAATCCCAAAGGCCTTT 956
Query 1006 TATTTGGGTCATAAGAGGTTCGGAAAAGTATAAAGAACTATTTGAGTGGATGTTGGAGAG 1065
||||||||||||||||||| ||| |||||||| || ||||||||||||| | |||||
Sbjct 957 CATTTGGGTCATAAGAGGTTGGGAGAAGTATAACGAGTTATTTGAGTGGATCTCAGAGAG 1016
Query 1066 CGGTTTTGAA-GAAAGAATCAAAGAGAGAGGACTTCTCATTAA-AGGGTGGGCACCTCAA 1123
||||||| || |||||||||||||||||||| ||||||| ||| ||| ||| | ||||||
Sbjct 1017 CGGTTTT-AAGGAAAGAATCAAAGAGAGAGGCCTTCTCA-TAAGAGGATGGTCGCCTCAA 1074
Query 1124 GTCCTTATCCTTTCACATCCTTCCGTTGGAGGATTCCTGACACACTGTGGATGGAACTCG 1183
| |||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||
Sbjct 1075 ATGCTTATCCTTTCACACCCTGCCGTTGGAGGATTCTTGACACATTGTGGATGGAACTCG 1134
Query 1184 ACTCTCGAAGGAATCACCTCAGGCATTCCACTGATCACTTGGCCGCTGTTTGGAGACCAA 1243
||||| ||||||||||| |||||| ||||| || |||||||||| | ||||||||||||
Sbjct 1135 ACTCTTGAAGGAATCACTTCAGGCGTTCCATTGCTCACTTGGCCATTATTTGGAGACCAA 1194
Query 1244 TTCTGCAACCAAAAACTGGTC-GTTCAAG-TACTAAAAGCCGGTGTAAGTGCCGGGGTTG 1301
|||||||| | ||| ||| | || | || |||||||||||||||| || ||||||||||
Sbjct 1195 TTCTGCAATGAGAAATTGG-CGGTGC-AGATACTAAAAGCCGGTGTGAGAGCCGGGGTTG 1252
Query 1302 AAGAAGT-CATGAAATGGGGAGAAGAAGATAAAATAGGAGTGTTAGTGGATAAAGAAGGA 1360
|| ||| ||||| |||||||||||| || || ||||||| || |||||||||||||||
Sbjct 1253 -AGGAGTCCATGAGATGGGGAGAAGAGGAGAACGTAGGAGTATTGGTGGATAAAGAAGGA 1311
Query 1361 GTGAAA-AAGGCTGTGGAAGAATTGATGGGTGATAGTGATGATGCAAAAGAGAGGAGAAG 1419
|| ||| ||||| |||||||||||||||||||||||| ||||||| || ||||| ||||
Sbjct 1312 GT-AAAGAAGGCAGTGGAAGAATTGATGGGTGATAGTAATGATGCTAAGGAGAGAAGAAA 1370
Query 1420 AAGAGTCAAAGAGCTTGGAGAATTAGCTCACAAAGCTGTGGAAAAAGGAGGCTCTTCTCA 1479
||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1371 AAGAGTCAAAGAGCTTGGAGAATTAGCTCACAAGGCTGTGGAGGAAGGAGGCTCTTCTCA 1430
Query 1480 TTCTAACATCACACTCTTGCTACAAGACATAATGCAACTAGCACAATTCAAGAATTGA 1537
||| ||||||||| | |||||||||||||||| ||||||||| ||| |||||| |||
Sbjct 1431 TTCCAACATCACATTATTGCTACAAGACATAACACAACTAGCAGAATCCAAGAAATGA 1488
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62429911555
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5