BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G36880.1
Length=1687
Score E
Sequences producing significant alignments: (Bits) Value
Ahg934322 jgi|Araly1|934322|scaffold_402310.1 2132 0.0
Ahg479215 jgi|Araly1|479215|fgenesh2_kg.3__1916__AT3G17390.1 830 0.0
Ahg943560 jgi|Araly1|943560|scaffold_604104.1 789 0.0
> Ahg934322 jgi|Araly1|934322|scaffold_402310.1
Length=1289
Score = 2132 bits (1154), Expect = 0.0
Identities = 1233/1272 (97%), Gaps = 2/1272 (0%)
Strand=Plus/Plus
Query 156 AGAAATGGAAACGTTCCTATTTACCTCTGAATCCGTCAATGAAGGACACCCAGACAAGCT 215
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 19 AGAAATGGAAACCTTCCTATTTACCTCTGAATCCGTCAATGAGGGACACCCAGACAAGCT 78
Query 216 TTGTGACCAGATTTCTGATGCGATCCTTGATGCTTGCTTAGAGCAAGATCCTGAAAGCAA 275
|||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 79 TTGTGACCAGGTTTCTGATGCGATCCTCGATGCTTGCTTAGAGCAAGACCCTGAAAGCAA 138
Query 276 AGTGGCGTGTGAGACATGCACCAAGACCAACATGGTGATGGTGTTTGGTGAGATCACTAC 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 AGTGGCGTGTGAGACATGCACCAAGACCAACATGGTGATGGTGTTTGGTGAGATCACTAC 198
Query 336 CGCTGCGAAAGTTGACTATGAGAAGATTGTTAGATCCACTTGCAGGGAGATTGGTTTTAT 395
| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 199 CTCTGCGAAAGTGGACTATGAGAAGATTGTTAGATCCACTTGCAGGGAGATTGGGTTTAT 258
Query 396 CTCTGCTGATGTTGGTCTTGACGCTGACAAATGCAATGTTTTGGTTAACATTGAGCAACA 455
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 CTCGGCCGATGTTGGTCTTGACGCTGACAAATGCAATGTTTTGGTTAACATTGAGCAACA 318
Query 456 GAGCCCTGACATTGCTCAGGGTGTTCATGGTCATTTGACCAAGAAGCCTGAAGATATTGG 515
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 319 GAGTCCTGATATTGCTCAGGGTGTTCATGGTCATTTGACCAAGAAGCCTGAAGATATTGG 378
Query 516 TGCTGGTGATCAGGGACATATGTTTGGGTATGCTACTGATGAGACTCCTGAGCTCATGCC 575
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 379 TGCTGGTGATCAGGGACATATGTTTGGGTATGCTACTGATGAGACTCCTGAGCTTATGCC 438
Query 576 GTTGACTCATGTCCTAGCCACCAAGCTTGGTGCTAAGCTTACTGAAGTGAGGAAGAACAA 635
|||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 439 CTTGACTCACGTCCTAGCTACCAAGCTTGGTGCTAAGCTCACTGAAGTGAGGAAGAACAA 498
Query 636 GACTTGCCCATGGTTGAGGCCTGATGGTAAGACACAAGTCACAGTGGAGTACAAGAACGA 695
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 499 GACTTGCCCATGGTTGAGGCCTGATGGTAAGACCCAGGTCACAGTGGAGTACAAGAACGA 558
Query 696 TGGTGGAGCTATGATTCCGATTAGAGTCCACACTGTTCTTATCTCAACTCAACATGACGA 755
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct 559 TGGTGGAGCTATGATTCCGATTAGAGTCCACACGGTGCTCATCTCAACTCAACATGACGA 618
Query 756 AACTGTCACCAATGATGAGATTGCTGCTGACTTGAAGGAGCATGTGATCAAGCCTGTTAT 815
|||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 619 AACTGTCACCAACGACGAGATTGCTGCTGACTTGAAGGAGCATGTGATCAAGCCGGTTAT 678
Query 816 CCCTGCTAAGTACCTTGACGATAACACCATCTTTCACTTGAACCCATCTGGTCGTTTTGT 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 CCCTGCTAAGTACCTTGACGATAACACCATCTTTCACTTGAACCCATCTGGTCGTTTTGT 738
Query 876 CATCGGAGGGCCTCATGGTGATGCTGGACTTACAGGGAGGAAGATCATCATTGACACTTA 935
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 739 CATCGGAGGGCCTCATGGTGATGCTGGACTTACTGGGAGGAAGATCATCATTGACACTTA 798
Query 936 TGGTGGTTGGGGTGCTCATGGTGGAGGTGCCTTCTCAGGAAAGGACCCAACCAAGGTTGA 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 799 TGGTGGTTGGGGTGCTCATGGTGGAGGTGCCTTCTCAGGAAAGGACCCAACCAAGGTTGA 858
Query 996 CAGAAGCGGTGCCTATATCGTGAGGCAGGCTGCAAAGAGCGTGGTAGCAGCAGGACTCGC 1055
|||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 859 CAGAAGTGGTGCCTATATCGTGAGGCAGGCTGCAAAGAGTGTGGTAGCAGCAGGGCTCGC 918
Query 1056 ACGCCGTTGTATCGTGCAGGTATCATACGCCATTGGTGTCCCTGAGCCGCTCTCAGTGTT 1115
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 919 ACGCCGCTGTATCGTGCAGGTATCATACGCCATTGGTGTCCCTGAGCCGCTCTCAGTGTT 978
Query 1116 TGTTGACACCTACAAGACCGGGACCATCCCAGACAAGGATATCCTTGTGTTGATCAAGGA 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 979 TGTTGACACCTACAAGACCGGGACCATCCCAGACAAGGATATCCTTGTGTTGATCAAGGA 1038
Query 1176 AGCATTTGACTTCAGGCCGGGAATGATGGCCATTAACCTTGACCTTAAGAGGGGAGGTAA 1235
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1039 AGCATTTGACTTCAGGCCGGGAATGATGGCCATTAACCTTGACCTGAAGAGGGGAGGTAA 1098
Query 1236 CTTCAGGTTCCAGAAAACCGCTGCGTATGGCCATTTCGGGCGTGATGACCCTGACTTCAC 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 CTTCAGGTTCCAGAAAACCGCTGCGTATGGCCATTTCGGGCGTGATGACCCTGACTTCAC 1158
Query 1296 TTGGGAGGTTGTCAAGCCGCTCAAGCCAAAGGCCTAGACAGAAACAAAGCTGGCAATTGC 1355
||||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||
Sbjct 1159 TTGGGAGGTCGTCAAGCCGCTCAAGCCAAAGGCCTAAACATAAACAAAGCTGGTAATTGC 1218
Query 1356 AAGAACTGAGTTGAGTC-ACTCCCCAACTACTGGGAACTTATCATTATACCATTATTATT 1414
||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1219 AAGAACTGAGTTGAG-CGACTCCCCAACTACTGGGAACTTATCATGATACCATTATTATT 1277
Query 1415 GCAAATGACTGA 1426
|||||||| |||
Sbjct 1278 GCAAATGATTGA 1289
> Ahg479215 jgi|Araly1|479215|fgenesh2_kg.3__1916__AT3G17390.1
Length=1616
Score = 830 bits (449), Expect = 0.0
Identities = 946/1184 (80%), Gaps = 42/1184 (4%)
Strand=Plus/Plus
Query 158 AAATGGAAACGTTCCTATTTACCTCTGAATCCGTCAATGAAGGACA-CCCAGACAAGCTT 216
|||||||| | || | || || |||||||||||||| || ||||| ||| ||||||||
Sbjct 213 AAATGGAATCTTTTTTGTTCACATCTGAATCCGTCAACGAGGGACATCCC-GACAAGCTC 271
Query 217 TGTGACCAGATTTCTGATGCGATCCTTGATGCTTG-CTTAGAGCAAGATCCTGAAAGCAA 275
||||| ||||| || || || ||||| |||||||| ||| || ||||| ||||| |||||
Sbjct 272 TGTGATCAGATCTCCGACGCTATCCTCGATGCTTGTCTT-GAACAAGACCCTGAGAGCAA 330
Query 276 AGTGGCGTGTGAGACATGCACCAAGACCAACATGGTGATGGTGTTTGGTGAGATCACTAC 335
||| || |||||||| || |||||||| |||||||| ||||| ||||| || ||||| ||
Sbjct 331 AGTTGCTTGTGAGACTTGTACCAAGACTAACATGGTCATGGTTTTTGGAGAAATCACCAC 390
Query 336 CGCTGCGAAAGTTGACTATGAGAAGATTGTTAGAT-CCACTTGCAGGGAGATTGGTTTTA 394
| || || ||||| || ||| |||||||| | | || ||| | || ||||| ||
Sbjct 391 CAAGGCTAATGTTGATTACGAGCAGATTGTTCG-TAAAACGTGCCGTGATATTGGATTCG 449
Query 395 TCTCTGCTGATGTTGGTCTTGACGCTGACAAATGCAATGTT-TTGGTTAACATTGAGCAA 453
| ||||||||||||||||| || |||||||| || || ||| || |||||||||||||||
Sbjct 450 TATCTGCTGATGTTGGTCTAGATGCTGACAATTGTAAGGTTCTT-GTTAACATTGAGCAA 508
Query 454 CAGAGCCCTGACATTGCTCAGGGTGTTCATGGTCATTTGACCAAGAAGCCTGAAGATATT 513
||||| ||||||||||| || ||||||||||||||| | ||||||||||| || || |
Sbjct 509 CAGAGTCCTGACATTGCACAAGGTGTTCATGGTCATCTCACCAAGAAGCCAGAGGAGGTC 568
Query 514 GGTGCTGGTGATCAGGGACATATGTTTGGGTATGCTACTGATGAGACTCCTGAGCTCATG 573
|| ||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct 569 GGAGCTGGTGATCAAGGTCACATGTTTGGGTATGCTACTGATGAGACTCCTGAGCTCATG 628
Query 574 CCG-TTGACTCATGTCCTAGCCACCAAGCTTGGTGCTAAGCTTACTGAAGTGAGGAAGAA 632
||| || ||||| || || || || |||||||| ||||| || |||||||| | |||||
Sbjct 629 CCGCTT-ACTCACGTTCTCGCTACTAAGCTTGGAGCTAAACTCACTGAAGTTCGCAAGAA 687
Query 633 CAAGA-CTTGCCCATGGTTGAGGCCTGATGGTAAGACACAAGTCAC-AGTGGAGTACAAG 690
|| ||||||| |||||||||||||| |||||||| |||||||| | || ||||||
Sbjct 688 TG-GAACTTGCCCGTGGTTGAGGCCTGACGGTAAGACTCAAGTCACTATTG-AGTACATC 745
Query 691 AACGATGGTGGAGCTATGATTCC-GATTA-GAGTCCACACTGTTCTTATCTCAACTCAAC 748
||||| | ||||| ||| |||| | | | | |||||||||||||| |||||||| || |
Sbjct 746 AACGAAAGCGGAGCCATGGTTCCTG-T-ACGTGTCCACACTGTTCTCATCTCAACACAGC 803
Query 749 ATGACGAAACTGTCACCAATGATGAGATTGCTGCTGA-CTTGAAGGAGCATGTGATCAAG 807
| ||||| ||||| || || |||||||| || ||||| ||| ||||||||||||||||||
Sbjct 804 ACGACGAGACTGTGACTAACGATGAGATCGCAGCTGATCTT-AAGGAGCATGTGATCAAG 862
Query 808 CCTGTTATCCCTGCTAAGTACCTTGACGATAACACCATCTTTCA-CTTGAACCCATCTGG 866
|| || ||||| | ||||||||||| || || |||||||| || || |||||||||||
Sbjct 863 CCAGTGATCCCAGAGAAGTACCTTGATGAGAAAACCATCTTCCATCTC-AACCCATCTGG 921
Query 867 TCGTTTTGTCATCGGAGGGCCTCATGGTGATGCTGGACTTACAGGGAGGAAGATCATCAT 926
||||||||| || ||||| |||||||| ||||| || ||||| || | |||||||||||
Sbjct 922 TCGTTTTGTTATTGGAGGTCCTCATGGAGATGCAGGGCTTACCGGCCGTAAGATCATCAT 981
Query 927 TGACACTTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCCTTCTCAGGAAAGGACCCAAC 986
|| ||||| |||||||||||||| ||||| || ||||| ||||| || |||||||||||
Sbjct 982 CGATACTTACGGTGGTTGGGGTGCACATGGAGGTGGTGCTTTCTCTGGGAAGGACCCAAC 1041
Query 987 CAAGGTTGACAGAAGCGGTGCCTATATCGTGAGGCAGGCTGCAAAGAGCGTGGTAGC-AG 1045
|||||||||||| || || || || ||||| ||||| || || |||||| | ||||| ||
Sbjct 1042 CAAGGTTGACAGGAGTGGGGCTTACATCGTTAGGCAAGCAGCTAAGAGCATTGTAGCCAG 1101
Query 1046 CAGGACTCGC-ACGCCGTTGTATCGTGCAGGTATCATACGCCATTGGTGTCCCTGAGCCG 1104
|| || || | || | | || ||||| || || || ||||||||||||||||||||
Sbjct 1102 TGGG-CTTGCGAGGCGGGTC-ATTGTGCAAGTCTCCTATGCCATTGGTGTCCCTGAGCCA 1159
Query 1105 CTCTCAGTGTTTGTTGACACCTACAAGA-CCGGGACCATCCCAGACAAGGATATCCTTGT 1163
| || |||||||| |||| || || |||| | || ||||||||||| || ||||
Sbjct 1160 TTGTCTGTGTTTGTGGACAGTTATG-GAACCGGAAAGATACCAGACAAGGAGATTCTTGA 1218
Query 1164 G-TTGATCAAGGA-AGCATTTGACTTCAGGCCGGGAATGATGGCCATTAACCTTG-ACCT 1220
| ||| | ||||| || ||||| |||||||| || ||||| |||||||| ||| | |
Sbjct 1219 GATTG-TGAAGGAGAGT-TTTGATTTCAGGCCAGGTATGATCTCCATTAAC-TTGGAT-T 1274
Query 1221 T-AAGAGGGGAGGTAACT--TCAGGTTCCAGAAAACCGCTGCGTATGGCCA-TTTCGGGC 1276
| ||||| |||||||| | | |||||| ||| || || || ||||| || ||| ||
Sbjct 1275 TGAAGAGAGGAGGTAA-TGGT-AGGTTCTTGAAGACTGCAGCTTATGGTCACTTT-GGAA 1331
Query 1277 GTGATGACCCTGACTTCACTTGGGAGGTTGTCAAGCCGCTCAAG 1320
| || || |||| ||||| |||||||| |||||||| ||||||
Sbjct 1332 GGGACGATGCTGATTTCACCTGGGAGGTAGTCAAGCCACTCAAG 1375
> Ahg943560 jgi|Araly1|943560|scaffold_604104.1
Length=1226
Score = 789 bits (427), Expect = 0.0
Identities = 944/1190 (79%), Gaps = 50/1190 (4%)
Strand=Plus/Plus
Query 156 AGAAATGGAAACGTTCCTATTT-ACCTCTGAATCCGTCAATGAAGGACACCCAGACAAGC 214
||| ||||| || ||||| ||| || ||||| || || || |||||||||||||||||||
Sbjct 17 AGAGATGGAGACTTTCCT-TTTCACATCTGAGTCTGTGAACGAAGGACACCCAGACAAGC 75
Query 215 TTTGTGACCAGATTTCTGATGCGA-TCCTTGATGCTTG-CTTAGAGCAAGATCCTGAAAG 272
|||| |||||||| |||||||| | |||| ||||| || ||| |||||||| ||||| ||
Sbjct 76 TTTGCGACCAGATCTCTGATGC-AGTCCTCGATGCCTGCCTT-GAGCAAGACCCTGACAG 133
Query 273 CAAAGTGGCGTGTGAGACATGCACCAAGACCAACATGGTGATGGTGTTTGGTGAGATCAC 332
|||||| || ||||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct 134 CAAAGTTGCTTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTCGGTGAGATCAC 193
Query 333 TACCGCTGCGAA-AGTTGACTATGAGAAGATTGTTAGATC-CACTTGCAGGGAGATTGGT 390
||| || | | ||||||| ||||||||||| | | ||||||| | |||||
Sbjct 194 CACCAAGGCCACTA-TTGACTACGAGAAGATTGTCCG-TGACACTTGCCGCTCCATTGGA 251
Query 391 TTTATCTCTGCTGATGTTGGTCTTGACGCTGACAAATGCAATGTT-TTGGTTAACATTGA 449
|| ||||||| ||||||||||||||| |||||||||||||| || ||| | ||||||||
Sbjct 252 TTCATCTCTGATGATGTTGGTCTTGATGCTGACAAATGCAAAGTCCTTG-TCAACATTGA 310
Query 450 GCAACAGAGCCCTGACATTGCTCAGGGTGTTCATGGTCATTTGACCAAGAAG-CCTGAAG 508
||||||||||| ||||||||||| |||||||| |||||||| ||||| | | || ||||
Sbjct 311 ACAACAGAGCCCAGACATTGCTCAAGGTGTTCACGGTCATTTCACCAA-ACGACCAGAAG 369
Query 509 ATATTGGTGCTGGTGATCAGGGACATATGTTTGGGTATGCTACTGATGAGACTCCTGAGC 568
| ||||| |||||||| || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct 370 ACATTGGAGCTGGTGACCAAGGACACATGTTTGGTTATGCCACTGATGAAACCCCTGAGC 429
Query 569 TCATGCCGTTGA-CTCATGTCCTAGCCACCAAGCTTGGTGCTAAG-CTTACTGAAGTGAG 626
||||||| |||| | |||||||| || |||||| |||||||| | || |||||||| ||
Sbjct 430 TCATGCCTTTGAGC-CATGTCCTTGCAACCAAGATTGGTGCTC-GTCTCACTGAAGTCAG 487
Query 627 GAAGAACAAGA-CTTGCCCATGGTTGAGGCCTGATGGTAAGACACAAGTCACAGTGGAGT 685
|||||| || |||||| ||||| || || ||||| ||||| |||||||| || ||||
Sbjct 488 GAAGAATG-GAACTTGCCGTTGGTTAAGACCAGATGGCAAGACCCAAGTCACTGTTGAGT 546
Query 686 ACAAGAACGATGGTGGAGCTATGATTCC-GATTAGAGTCCACACTGTTCTTATCTCAACT 744
|| | ||||| || |||||| |||| | || | ||||||||||| || ||||||||
Sbjct 547 ACTACAACGACAACGGTGCTATGGTTCCAG-TTCGTGTCCACACTGTCCTGATCTCAACC 605
Query 745 CAACATGACGAAACTGTCACCAATGATGAGATTGCT-GCTGACTTGAAGGAGCATGTGAT 803
|| || || ||||| || ||||| ||||||||||| | |||| | ||||| || |||||
Sbjct 606 CAGCACGATGAAACCGTGACCAACGATGAGATTGCACG-TGACCTCAAGGAACACGTGAT 664
Query 804 CAAGCCTGTTATCCCTGCTAAGTACCTTGACGATAACACCATCTTTCACTTGAACCCATC 863
||||| | || || | || ||||||||||| || |||||||| ||| | ||||||||
Sbjct 665 TAAGCCAATCATTCCAGAGAAATACCTTGACGACAAAACCATCTTCCACCTCAACCCATC 724
Query 864 TGGTCGTTTTGTCATCGGAGGG-CCTCATGGTGATGCTGGACTT-ACAGGGAGG-AAGAT 920
|| || || || ||||| ||| || || ||||| ||||| || || || | | |||||
Sbjct 725 AGGCCGGTTCGTGATCGG-GGGACCACACGGTGACGCTGGT-TTGACCGG-ACGTAAGAT 781
Query 921 CATCATTGACACTTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCCTTCTCAGG-AAAGG 979
|||||| ||||| || ||||| ||||| ||||| || |||||||| |||||||| ||||
Sbjct 782 CATCATCGACACATACGGTGGATGGGGAGCTCACGGAGGAGGTGCTTTCTCAGGCAAAG- 840
Query 980 ACCCAACCAAGGTTGACAGAAGCGGTGCCTATATCGTGAGGCAGGCTGCAAAGAGCGTGG 1039
|||||||||| ||||||||||| || || || |||||||||||||| |||||||| ||||
Sbjct 841 ACCCAACCAAAGTTGACAGAAGTGGAGCTTACATCGTGAGGCAGGCAGCAAAGAGTGTGG 900
Query 1040 TAGC-AGCAGGACTCGCACGCCGTTG-TATCGTGCAGGTATCATACGCCATTGGTGTCCC 1097
| || | ||| | || || | | | | || || || ||||||||||||||||||||
Sbjct 901 TGGCTAAT-GGAATGGCTCGTAGG-GCTCTTGTCCAAGTCTCATACGCCATTGGTGTCCC 958
Query 1098 TGAGCCGCTCTCAGTGTTTGTTGACACCTACAAGACC-GGGACCATCCCAGACAAGGATA 1156
||||| | || || || |||||||| ||| || | ||| || ||||||||||| |
Sbjct 959 CGAGCCATTGTCTGTCTTCGTTGACACTTACG-GAACAGGGTTGATTCCAGACAAGGAGA 1017
Query 1157 TCCTTGT-GTT-GATCAAGGA-AGCATTTGACTTCAGGCCGGGAATGATGGCCATTAACC 1213
|||| | | | | | || || | | ||||| ||||| || ||||||||| | ||||||
Sbjct 1018 TCCT-GAAGATCG-TGAAAGAGACC-TTTGATTTCAGACCAGGAATGATGACAATTAAC- 1073
Query 1214 TTG-ACCTT-AAGAGGGGAGGTAACTTCA-GGTTCCAGAAAACCGCTGCGTATGGCCATT 1270
||| || || ||||| ||||| || | | |||| |||||| || |||||||| ||||
Sbjct 1074 TTGGAC-TTGAAGAGAGGAGGAAA-TGGAAGGTTTTTGAAAACGGCAGCGTATGGACATT 1131
Query 1271 TCGGGCGTGATGACCCTGACTTCACTTGGGAGGTTGTCAAGCCGCTCAAG 1320
|||| | || |||||||| |||||||||||||| || ||||| ||||||
Sbjct 1132 TCGGAAGAGACGACCCTGATTTCACTTGGGAGGTCGTGAAGCCACTCAAG 1181
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63267896945
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5