BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G37040.1 Length=2530 Score E Sequences producing significant alignments: (Bits) Value Ahg482690 jgi|Araly1|482690|fgenesh2_kg.4__1750__AT2G37040.1 3925 0.0 Ahg938226 jgi|Araly1|938226|scaffold_502417.1 2095 0.0 Ahg887428 jgi|Araly1|887428|Al_scaffold_0693_1 725 0.0 Ahg487203 jgi|Araly1|487203|fgenesh2_kg.6__337__AT5G04230.1 459 6e-128 > Ahg482690 jgi|Araly1|482690|fgenesh2_kg.4__1750__AT2G37040.1 Length=2436 Score = 3925 bits (2125), Expect = 0.0 Identities = 2306/2394 (96%), Gaps = 9/2394 (0%) Strand=Plus/Plus Query 104 TAAAACTAAGA-TCAAAAGTCTAAATGGAGATTAACGGGGCACACAAGAGC-AACGGAGG 161 ||||||||||| ||||||||| |||||||||||||||| |||||||| ||| |||||||| Sbjct 29 TAAAACTAAGATTCAAAAGTCAAAATGGAGATTAACGGAGCACACAA-AGCTAACGGAGG 87 Query 162 AGGAGTGGACGCTATGTTATGCGGCGGAGACATCAAGACAAAGAACATGGTGATCAACGC 221 | | | || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 88 ATCAATCGATGCTATGTTATGCGGCGGAGACATCAAGACAAAGAACATGGTGATCAACGC 147 Query 222 GGAGGATCCTCTCAACTGGGGAGCTGCAGCGGAGCAAATGAAAGGTAGCCATTTGGATGA 281 ||| ||||||||||||||||||||||| || |||||||||||||| |||||||||||||| Sbjct 148 GGAAGATCCTCTCAACTGGGGAGCTGCGGCTGAGCAAATGAAAGGAAGCCATTTGGATGA 207 Query 282 AGTGAAGAGAATGGTTGCTGAGTTTAGGAAGCCAGTTGTGAATCTTGGTGGTGAGACTCT 341 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 208 AGTGAAGAGAATGGTTGCTGAGTTTAGGAAGCCAGTGGTGAATCTTGGAGGTGAGACTCT 267 Query 342 GACCATTGGACAAGTGGCTGCGATCTCAACTATTGGTAACAGTGTGAAGGTGGAGCTATC 401 |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| || Sbjct 268 GACCATTGGACAAGTGGCTGCGATCTCAACCATTGGTAACGGTGTGAAGGTGGAGCTGTC 327 Query 402 GGAGACAGCTAGAGCCGGTGTGAATGCTAGTAGTGATTGGGTTATGGAGAGTATGAACAA 461 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 328 GGAGACCGCTAGAGCCGGTGTGAATGCGAGTAGTGATTGGGTTATGGAGAGTATGAACAA 387 Query 462 AGGCACTGATAGTTATGGTGTTACTACTGGTTTTGGTGCTACTTCTCATCGGAGAACCAA 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 388 AGGCACTGATAGTTATGGTGTTACTACTGGTTTTGGTGCTACTTCTCATCGGAGAACCAA 447 Query 522 AAACGGTGTCGCACTTCAGAAGGAACTTATTAGATTCCTTAACGCCGGAATATTCGGAAG 581 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 448 AAACGGTGTCGCACTTCAGAAGGAGCTTATTAGATTCCTTAACGCCGGAATATTCGGAAG 507 Query 582 CACGAAAGAAACAAGCCACACATTGCCACACTCCGCCACAAGAGCCGCCATGCTTGTACG 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 508 CACGAAAGAAACAAGCCACACATTGCCACACTCCGCCACAAGAGCCGCCATGCTTGTACG 567 Query 642 AATCAACACTCTCCTCCAAGGATTTTCCGGTATCCGATTTGAGATTCTCGAAGCAATTAC 701 |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| || Sbjct 568 AATCAACACTCTCCTCCAAGGATTTTCCGGTATCCGCTTCGAGATTCTCGAAGCAATCAC 627 Query 702 CAGTTTCCTCAACAACAACATCACTCCATCTCTCCCCCTCCGTGGTACAATCACCGCCTC 761 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 628 CAGTTTCCTCAACAACAACATCACTCCATCTCTCCCACTCCGCGGTACAATCACCGCCTC 687 Query 762 CGGAGATCTCGTTCCTCTCTCCTACATCGCCGGACTTCTCACCGGTCGTCCCAATTCCAA 821 ||||||||||||||||||||| |||||||||||| |||| ||||| |||||||||||||| Sbjct 688 CGGAGATCTCGTTCCTCTCTCTTACATCGCCGGAATTCTAACCGGCCGTCCCAATTCCAA 747 Query 822 AGCTACTGGTCCCAACGGTGAAGCTTTAACAGCAGAGGAAGCTTTCAAATTAGCAGGAAT 881 |||||| ||||||||||||||||||||||| || || ||||| ||||||||||| ||||| Sbjct 748 AGCTACCGGTCCCAACGGTGAAGCTTTAACCGCTGAAGAAGCCTTCAAATTAGCTGGAAT 807 Query 882 CAGCTCCGGATTCTTTGATCTCCAGCCTAAGGAAGGTCTCGCGCTAGTCAATGGCACGGC 941 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 808 CAGCTCCGGATTCTTCGATCTCCAGCCTAAGGAAGGTCTCGCGCTTGTCAATGGCACGGC 867 Query 942 GGTTGGATCTGGAATGGCGTCAATGGTGTTATTCGAAACGAATGTTCTCTCTGTTTTGGC 1001 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 868 GGTTGGATCTGGAATGGCGTCGATGGTGTTATTCGAAACGAATGTTCTCTCTGTTTTGGC 927 Query 1002 TGAGATTTTGTCGGCGGTTTTCGCAGAGGTGATGAGTGGTAAGCCTGAGTTCACCGATCA 1061 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 928 TGAGATTTTGTCGGCGGTTTTCGCAGAGGTGATGAGTGGTAAGCCTGAATTCACCGATCA 987 Query 1062 TCTCACTCACAGACTTAAACATCATCCCGGTCAAATCGAAGCGGCGGCGATAATGGAGCA 1121 ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || Sbjct 988 TCTCACTCACAGACTCAAACATCACCCCGGTCAAATCGAAGCGGCGGCGATAATGGAACA 1047 Query 1122 TATCCTCGACGGAAGCTCGTACATGAAATTAGCTCAGAAGCTTCACGAGATGGATCCGTT 1181 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1048 TATCCTCGACGGAAGCTCGTACATGAAATTAGCTCAGAAGCTTCACGAAATGGATCCGTT 1107 Query 1182 ACAGAAACCTAAACAAGATCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCA 1241 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1108 ACAGAAACCAAAACAAGATCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCA 1167 Query 1242 AATCGAAGTGATCCGTTACGCAACGAAATCGATCGAGCGTGAGATTAACTCCGTCAACGA 1301 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1168 AATCGAAGTAATCCGTTACGCAACGAAATCGATCGAGCGTGAGATTAACTCCGTCAACGA 1227 Query 1302 TAATCCGTTGATCGATGTTTCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAAC 1361 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1228 TAATCCGTTGATCGATGTATCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAAC 1287 Query 1362 ACCAATCGGAGTTTCAATGGATAACACGAGATTGGCGATAGCAGCGATTGGTAAACTCAT 1421 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1288 ACCAATCGGAGTTTCAATGGATAACACGAGATTGGCGATTGCAGCGATTGGTAAACTCAT 1347 Query 1422 GTTTGCTCAATTCTCAGAGCTTGTGAATGATTTCTACAACAATGGTTTACCCTCGAATCT 1481 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1348 GTTTGCTCAATTCTCAGAGCTTGTGAATGATTTCTACAACAATGGTTTACCTTCGAATCT 1407 Query 1482 AACCGCTTCGAGGAATCCAAGTTTGGATTATGGATTCAAGGGAGCTGAGATTGCAATGGC 1541 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1408 AACCGCATCGAGGAATCCAAGTTTGGATTATGGATTCAAAGGAGCTGAGATTGCAATGGC 1467 Query 1542 TTCTTATTGTTCAGAGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTCAATCAGC 1601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1468 TTCTTATTGTTCAGAGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTCAATCAGC 1527 Query 1602 AGAGCAACATAACCAAGATGTCAACTCTTTGGGACTAATCTCGTCTCGCAAAACTTCTGA 1661 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 1528 AGAGCAACATAACCAAGATGTGAACTCTTTGGGACTAATCTCATCTCGCAAAACTTCTGA 1587 Query 1662 AGCTGTTGATATTCTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGT 1721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1588 AGCTGTTGATATTCTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGT 1647 Query 1722 GGATTTGAGACATTTGGAGGAGAATTTGAGACAGACTGTGAAGAACACTGTCTCTCAAGT 1781 ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| Sbjct 1648 GGATTTGAGACATTTGGAGGAGAATCTGAAACAGACTGTGAAGAACACTGTTTCTCAAGT 1707 Query 1782 GGCGAAGAAAGTTCTTACTACTGGAGTCAATGGTGAGCTTCATCCTTCTCGCTTCTGCGA 1841 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1708 GGCCAAGAAAGTTCTTACTACTGGTGTCAATGGTGAGCTTCATCCTTCTCGCTTCTGCGA 1767 Query 1842 AAAGGATTTACTCAAAGTTGTAGACCGTGAACAAGTCTACACATACGCGGATGATCCTTG 1901 ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1768 GAAGGATTTACTCAAAGTCGTTGACCGTGAACAAGTCTACACATACGCGGATGATCCTTG 1827 Query 1902 TAGCGCAACGTACCCGTTGATTCAGAAGCTGAGACAAGTTATTGTTGACCATGCTTTGAT 1961 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct 1828 TAGCGCAACGTACCCGTTGATTCAGAAGCTAAGACAAGTTATAGTTGATCATGCTTTGAT 1887 Query 1962 CAATGGTGAGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTCGA 2021 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1888 CAATGGTGAGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTTGA 1947 Query 2022 GGAGGAGCTTAAGGCAGTGCTACCGAAAGAAGTGGAAGCAGCAAGAGCAGCCTACGATAA 2081 |||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| || Sbjct 1948 GGAGGAGCTTAAAGCGGTGCTACCGAAAGAAGTGGAGGCAGCAAGAGCGGCGTACGACAA 2007 Query 2082 CGGAACATCGGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCATTGTATAGATT 2141 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2008 CGGAACATCAGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCTTTGTATAGATT 2067 Query 2142 CGTGAGGGAAGAGCTTGGAACAGAGCTTTTGACCGGAGAGAAAGTGACGTCGCCTGGAGA 2201 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 2068 CGTGAGGGAGGAGCTTGGAACAGAGCTTTTGACCGGAGAGAAAGTGACATCGCCCGGAGA 2127 Query 2202 AGAGTTCGACAAGGTTTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGA 2261 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2128 AGAGTTTGATAAGGTGTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGA 2187 Query 2262 ATGTCTCAACGAGTGGAACGGAGCTCCCATTCCAATATGTTAAGAGTATAGTCCTCTGtt 2321 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 2188 ATGTCTCAACGAGTGGAACGGAGCTCCCATTCCTATATGTTAAGAGTAAAGTCCTCTGTT 2247 Query 2322 ttttt-CTTACCATAAAGTCttttttttttt-ACATGTCTGAATAATTTTACCAAATGAT 2379 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2248 TTTTTTCTTACCATAAAGTCTTTTTTTTTTTTACATGTCTGAATAATTTTACCAAATGAT 2307 Query 2380 TGTCTGTGAAGTGGTTTTATGTCTGTCTAATTTAAATTTGTGTGTAAAACTCATTGTAAG 2439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2308 TGTCTGTGAAGTGGTTTTATGTCTGTCTAATTTAAATTTGTGTGTAAAACTCATTGTAAG 2367 Query 2440 TTCTCAAATGAACAATTTTTCTTTTAC-A-AATTAATGTGTGAATCATACCTTC 2491 ||||||||||||||||||||||||||| | || |||||||||||||||||||| Sbjct 2368 TTCTCAAATGAACAATTTTTCTTTTACTACAA--AATGTGTGAATCATACCTTC 2419 > Ahg938226 jgi|Araly1|938226|scaffold_502417.1 Length=2195 Score = 2095 bits (1134), Expect = 0.0 Identities = 1787/2100 (85%), Gaps = 54/2100 (3%) Strand=Plus/Plus Query 250 GCGGAGCAAATGAAAGGTAGCCATTTGGATGAAGTGAAG-AGAATGGTTGCTGAGTTTAG 308 ||||| ||||||||||| || ||||| |||||||||||| || ||||| | |||| | Sbjct 120 GCGGATCAAATGAAAGGAAGTCATTTAGATGAAGTGAAGAAG-ATGGTCGAAGAGTACCG 178 Query 309 GAAG-CCAGTTGTGAATCTTGGTGGTGAGACTCTGACCATTGGACAAGTGGCTGCGATCT 367 | || |||||||||||||||||||| || || ||||| || |||||||| || ||||||| Sbjct 179 G-AGACCAGTTGTGAATCTTGGTGGAGAAACACTGACGATCGGACAAGTTGCGGCGATCT 237 Query 368 CAACTATTGGTAACAGTGTGAAGGTGGAGCTATCGGAGACAGCTAGAGCCGGTGTGAATG 427 | || | || ||| || ||||| ||| || ||||| | | ||||||||||| || | Sbjct 238 CCACCGTAGGCGGCAGCGTTAAGGTTGAGTTAGCGGAGGCTTCAAGAGCCGGTGTCAAAG 297 Query 428 CTAGTAGTGATTGGGTTATGGAGAGTATGAACAAAGGCACTGATAGTTATGGTGTTACTA 487 |||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| || | Sbjct 298 CTAGCAGTGATTGGGTTATGGAGAGTATGAACAAAGGCACTGACAGTTACGGTGTCACCA 357 Query 488 CTGGTTTTGGTGCTACTTCTCATCGGAGAACCAAAAACGGTGTCGCACTT-CAGAA-GGA 545 | || ||||||||||||||||| ||||||||||||||||| |||| || || || || Sbjct 358 CCGGCTTTGGTGCTACTTCTCACCGGAGAACCAAAAACGGCACCGCA-TTACA-AACAGA 415 Query 546 ACTTATTAGATTCCTT-AACGCCGGAATATTCGGAAGCACGAAAGAAACAAGCCACACAT 604 ||| |||||||| || ||||||||||||||||||| |||||| || ||| | ||||| Sbjct 416 ACTCATTAGATT-TTTGAACGCCGGAATATTCGGAAACACGAAGGAGACATGTCACACGC 474 Query 605 TGCCACACTCCGCCACAAGAGCCGCCATGCTTGTAC-GAATCAACACTCTCCTCCAAGGA 663 |||| || ||||||||||||||||||||||| || | || |||||||||| ||||||||| Sbjct 475 TGCCGCAATCCGCCACAAGAGCCGCCATGCTCGT-CAGAGTCAACACTCTTCTCCAAGGA 533 Query 664 TTTTCCGGTATCCGATTTGAGATTCTCGAAGCAATTACCAGTTTCCTCAA-CAACAACAT 722 | |||||||||||||| |||||||||||||| ||||| ||| ||||||| | ||||||| Sbjct 534 TACTCCGGTATCCGATTCGAGATTCTCGAAGCGATTACAAGTCTCCTCAATC-ACAACAT 592 Query 723 CACTCCATCTCTCCCCCTCCGTGGTACAATCACCGCCTCCGGAGATCTCGTTCCTCTCTC 782 | |||| || || || |||||||| || || ||||||||||| ||||||||||||||||| Sbjct 593 CTCTCCTTCACTTCCTCTCCGTGGAACCATAACCGCCTCCGGCGATCTCGTTCCTCTCTC 652 Query 783 CTACATCGCCGGACTTCTCACCGGTCGTCCCAATTCCAAAGCTACTGGTCCCAACGGTGA 842 ||||||||||||| |||| ||||| ||||| ||||||||||| || |||||| |||||| Sbjct 653 CTACATCGCCGGAATTCTAACCGGCCGTCCTAATTCCAAAGCCACCGGTCCCGCCGGTGA 712 Query 843 AGCTTTAACAGCAG-AGGAAGCTTTC-A-AATTAGCAGGAATCAGCTCCGGATTCTTTGA 899 | | |||| || | | ||||||||| | || ||| |||||||| ||||||||||| || Sbjct 713 ATCGCTAACCGC-GAAAGAAGCTTTCGAGAA--AGCCGGAATCAGTTCCGGATTCTTCGA 769 Query 900 TCTCCAGCCTAAGGAAGG-TCTCGCGCTAGTCAATGGCACGGCGGTTGGATCTGGAATGG 958 ||| |||||||||||||| | | || || || ||||||||||||||||||||||| |||| Sbjct 770 TCTACAGCCTAAGGAAGGAT-TAGCTCTCGTTAATGGCACGGCGGTTGGATCTGGCATGG 828 Query 959 CGTCAATGGTGT-TATTCGAAACGAATGTTCTCTCTGTTTTGGCTGAGATTTTGTCGGCG 1017 |||| ||||| | |||||||| | ||||||| | || || || ||| |||| || ||| Sbjct 829 CGTCGATGGT-TCTATTCGAAGCCAATGTTCAAGCGGTGTTAGCGGAGGTTTTATCAGCG 887 Query 1018 GTTTTCGCAGAGGTGATGAGTGGTAAGCCTGAGTTCACCGATCATCTCACTCACAGACTT 1077 ||||||| ||||| ||||| || || ||||| |||||||||||||| |||||| | || Sbjct 888 ATTTTCGCGGAGGTTATGAGCGGGAAACCTGAATTCACCGATCATCTGACTCACCG-TTT 946 Query 1078 -AAACATCATCCCGGTCAAATCGAAGCGGCGGCGATAATGGAGCATATCCTCGACGGAAG 1136 || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 947 GAAGCATCATCCCGGACAAATCGAAGCGGCGGCGATAATGGAACATATCCTCGACGGAAG 1006 Query 1137 CTCGTACATGAAATTAGCTCAGAAGCTTCACGAGATGGATCCGTTACAGAAACCTAAACA 1196 ||| ||||||||||||||||| |||||||||||||||||||| || ||||| || ||||| Sbjct 1007 CTCATACATGAAATTAGCTCAAAAGCTTCACGAGATGGATCCATTGCAGAAGCCGAAACA 1066 Query 1197 AGATCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCAAATCGAAGTGATCCG 1256 ||||||||||||||||||||| |||||||||||| |||| |||||||| ||||| ||||| Sbjct 1067 AGATCGTTACGCTCTTCGTACCTCTCCTCAATGGCTAGGACCTCAAATTGAAGTAATCCG 1126 Query 1257 TTACGCAACGAAATCGATCGAGCGTGAGATTAACTCCGTCAACGATAATCCGTTGATCGA 1316 | | || ||||||||||| |||||||| || |||||||| |||||||||||||||||||| Sbjct 1127 TCAAGCTACGAAATCGATTGAGCGTGAAATCAACTCCGTTAACGATAATCCGTTGATCGA 1186 Query 1317 TGTTTCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTC 1376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1187 TGTTTCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTC 1246 Query 1377 AATGGATAACACGAGATTGGCGATAGCAGCGATTGGTAAACTCATGTTTGCTCAATTCTC 1436 ||||||||||||||||||||||| || |||||||| || || ||||||||||||||||| Sbjct 1247 TATGGATAACACGAGATTGGCGATTGCTGCGATTGGGAAGCTTATGTTTGCTCAATTCTC 1306 Query 1437 AGAGCTTGTGAATGATTTCTACAACAATGGT-TTACCCTCGAATCTAACCGCTTCGAGGA 1495 |||||||| |||||||||||||||||||| || || ||||||||||| |||||||| | Sbjct 1307 TGAGCTTGTTAATGATTTCTACAACAATGGACTT-CCTTCGAATCTAACAGCTTCGAGTA 1365 Query 1496 ATCCAAGTTTGGATTATGGATTCAAGGGAGCTGAGATTGCAATGGCTTCTTATTGTTCAG 1555 ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| || | Sbjct 1366 ATCCAAGTTTGGATTATGGATTCAAAGGAGCAGAGATTGCTATGGCTTCTTATTGCTCTG 1425 Query 1556 AGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTCAATCAGCAGAGCAACATAACC 1615 ||||||||||||| |||||||| || || ||||||||||||||||| || |||||||| | Sbjct 1426 AGCTTCAATACTTGGCTAATCCAGTCACAAGCCATGTTCAATCAGCTGAACAACATAATC 1485 Query 1616 AAGATGTCAACTCT-TTGGGACTAATCTCGTCTCGCAAAACTTCTGAAGCTGTTGATATT 1674 ||||||| || ||| |||| | | ||||||||||| ||||| ||||||||||| || ||| Sbjct 1486 AAGATGTGAATTCTCTTGG-ATTGATCTCGTCTCGTAAAACCTCTGAAGCTGTCGACATT 1544 Query 1675 CTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGTGGATTTGAGACAT 1734 || ||||| ||||||||||||||||| || | ||| |||||||||||||||||||||||| Sbjct 1545 CTTAAGCTAATGTCAACAACGTTCCTTGTGGGGATATGTCAAGCTGTGGATTTGAGACAT 1604 Query 1735 TTGGAGGAGAATTTGAGACAGACTGTGAAGAACACTGTCTCTCAAGTGGCGAAGAAAGTT 1794 |||||||||||| |||||||||||||||||||||| || |||||||| || |||||||| Sbjct 1605 TTGGAGGAGAATCTGAGACAGACTGTGAAGAACACAGTTTCTCAAGTTGCTAAGAAAGTG 1664 Query 1795 CTTA-CTACTGGAGTCAATGGTGAGCTTCATCCTTCTCGCTTCTGCGA-AAAGGATTTAC 1852 ||| | |||||| |||| |||||||| |||||||| || ||||| || |||| | || | Sbjct 1665 -TTAACCACTGGAATCAACGGTGAGCTACATCCTTCACGGTTCTGTGAGAAAG-ACTTGC 1722 Query 1853 TCAAAGTTGTAGACCGTGAACAAGTCTACACATACG-CGGATGATCCTTGTAGCGCAACG 1911 | || || || || ||||||||||| | ||| || | || ||||||| |||||||||||| Sbjct 1723 TTAAGGTCGTTGATCGTGAACAAGTGTTCACGTATGTCG-ATGATCCGTGTAGCGCAACG 1781 Query 1912 TACCCGTTGATTCAGA-AGCTGAGACAAGTTATTGTTGACCATGCTTTGATC-AATGGTG 1969 ||||| ||||| |||| | |||||||||||||| ||||| || |||||| || || |||| Sbjct 1782 TACCCATTGATGCAGAGA-CTGAGACAAGTTATCGTTGATCACGCTTTG-TCCAACGGTG 1839 Query 1970 AGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTCGAGGAGGAGC 2029 ||| ||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct 1840 AGACTGAGAAGAATGCAGTGACTTCGATCTTTCAAAAGATTGGAGCTTTTGAAGAGGAGC 1899 Query 2030 TTAAGGCAGTGCTACCGAAAG-AAGTGGAAGCAGCAAGAGCAGCCT-ACGATAACGGAAC 2087 ||||||| ||||| || |||| |||||||||| || ||||| | || | | ||| || || Sbjct 1900 TTAAGGCTGTGCTTCC-AAAGGAAGTGGAAGCCGCTAGAGC-GACTTATGGTAATGGTAC 1957 Query 2088 AT-CGGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCATTGTATAGATTCGTGA 2146 | || | || || ||| |||| |||||||||||||||||||| |||||||| ||||||| Sbjct 1958 -TGCGCCGATTCCTAACCGGATTAAGGAATGTAGGTCGTATCCGTTGTATAGGTTCGTGA 2016 Query 2147 GGGAAGAGCTTGGAACAGA-GCTT-TTGACCGGAGAGAAAGT-GACGTCGCCTGGAGAAG 2203 |||||||||| ||||| || | || ||||| || ||||| || | ||| || ||||| | Sbjct 2017 GGGAAGAGCTCGGAAC-GAAG-TTGTTGACTGGGGAGAAGGTTGT-GTCTCCCGGAGAGG 2073 Query 2204 AGTTCGACAAGGTTTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGAAT 2263 |||| || ||||| ||||| || || |||||||||||||| ||||||||| ||||||| | Sbjct 2074 AGTTTGATAAGGTCTTCACTGCAATGTGTGAAGGTAAAATTATTGATCCGTTGATGGATT 2133 Query 2264 GTCTCAACGAGTGGAACGGAGCTCCCATTCCAATATGTTAAGAGTATAGT-CCTCTGttt 2322 ||||||| || |||||||||||||| ||||| || || |||||| | | | ||||||||| Sbjct 2134 GTCTCAAGGAATGGAACGGAGCTCCGATTCCGATTTGCTAAGAG-AGAATTCCTCTGTTT 2192 > Ahg887428 jgi|Araly1|887428|Al_scaffold_0693_1 Length=663 Score = 725 bits (392), Expect = 0.0 Identities = 436/458 (95%), Gaps = 0/458 (0%) Strand=Plus/Plus Query 1847 ATTTACTCAAAGTTGTAGACCGTGAACAAGTCTACACATACGCGGATGATCCTTGTAGCG 1906 ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 206 ATTTACTCAAAGTCGTTGACCGTGAACAAGTCTACACATATGCGGATGATCCTTGTAGCG 265 Query 1907 CAACGTACCCGTTGATTCAGAAGCTGAGACAAGTTATTGTTGACCATGCTTTGATCAATG 1966 ||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct 266 CAACGTACCCGTTGATTCAGAAGCTAAGACAAGTTATAGTTGATCATGCTTTGATCAATG 325 Query 1967 GTGAGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTCGAGGAGG 2026 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 326 GTGAGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTCGAGGAGG 385 Query 2027 AGCTTAAGGCAGTGCTACCGAAAGAAGTGGAAGCAGCAAGAGCAGCCTACGATAACGGAA 2086 ||||||| || ||||| |||||||||||||| ||||||||||| || ||||| ||||||| Sbjct 386 AGCTTAAAGCGGTGCTTCCGAAAGAAGTGGAGGCAGCAAGAGCGGCATACGACAACGGAA 445 Query 2087 CATCGGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCATTGTATAGATTCGTGA 2146 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 446 CATCAGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCTTTGTATAGATTCGTGA 505 Query 2147 GGGAAGAGCTTGGAACAGAGCTTTTGACCGGAGAGAAAGTGACGTCGCCTGGAGAAGAGT 2206 |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 506 GGGAGGAGCTTGGAACAGAGCTTTTGACCGGAGAGAAAGTGACGTCGCCCGGAGAAGAGT 565 Query 2207 TCGACAAGGTTTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGAATGTC 2266 | || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 566 TTGATAAGGTGTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGTTGGAATGTC 625 Query 2267 TCAACGAGTGGAACGGAGCTCCCATTCCAATATGTTAA 2304 |||||||||||||||||||||||||||| ||||||||| Sbjct 626 TCAACGAGTGGAACGGAGCTCCCATTCCTATATGTTAA 663 Score = 340 bits (184), Expect = 2e-92 Identities = 198/205 (97%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 1608 ACATAACCAAGATGTCAACTCTTTGGGACTAATCTCGTCTCGCAAAACTTCTGAAGCTGT 1667 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 3 ACATAACCAAGATGTGAACTCTTTGGGACTAATCTCATCTCGCAAAACTTCTGAAGCTGT 62 Query 1668 TGATATTCTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGTGGATTT 1727 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 TGATATTCTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGTGGATTT 122 Query 1728 GAGACATTTGGAGGAGAATTTGAGACAGACTGTGAAGAACACTGTCTCTCAAGTGGCGAA 1787 ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| || Sbjct 123 GAGACATTTGGAGGAGAATCTGAAACAGACTGTGAAGAACACTGTTTCTCAAGTGGCCAA 182 Query 1788 GAAAGTTCTTACTACTGGAGTCAAT 1812 |||||||||||||||||| |||||| Sbjct 183 GAAAGTTCTTACTACTGGTGTCAAT 207 > Ahg487203 jgi|Araly1|487203|fgenesh2_kg.6__337__AT5G04230.1 Length=2113 Score = 459 bits (248), Expect = 6e-128 Identities = 995/1348 (74%), Gaps = 82/1348 (6%) Strand=Plus/Plus Query 391 GTGGAGCTATCGGA-GACAGCTAGAGCCGGTGTGAATGCTAGTAGTGATTGGGTTATGGA 449 |||||||| || || || ||| | |||||||| || || |||||||| ||||| ||||| Sbjct 202 GTGGAGCTTTCTGAGGA-GGCTCGTGCCGGTGTAAAGGCGAGTAGTGAGTGGGTGATGGA 260 Query 450 GAGTATGAA-CAAAGGCACTGATAGTTATGGTGTTACTACTGGTTTTGGTGCTA-CTTCT 507 ||| ||||| | || || || | ||||||| | || ||||| |||||| | | ||||| Sbjct 261 GAGCATGAATC-GTGGTACCGACACTTATGGTATCACCACTGGATTTGGTTC-ATCTTCT 318 Query 508 CATCGGAGAAC-CAAAAACGGTGTC-GCACTTCAGAAGGAACTTATTAGATTCCTT-AAC 564 | | |||| || | || |||| | || ||||| || || |||||||| | ||| ||| Sbjct 319 CGTAGGAGGACTGACCAA-GGTG-CTGCTCTTCAAAAAGAGCTTATTAG-GTACTTGAAC 375 Query 565 GCCGGAATATTCG-GA--AGC-AC-GA-AAGA-AACAAG-C-CACAC-ATTGCCAC-ACT 613 ||||| ||||||| | || || || | || ||| | | |||| || || | || Sbjct 376 GCCGGGATATTCGCTACCGGCGACGGAGATGACGACACGTCAAACACGCTT-CCCCGGCT 434 Query 614 CCGCCACAAGAGCCGCCATGCTTGTACGAATCAACACTCTCCTCCAAGGATTTTCCGGTA 673 || |||||||| || ||||| | || | ||||| ||||||||||| | || |||| Sbjct 435 -GGCTACAAGAGCGGCGATGCTCATCCGCGTAAACACCCTCCTCCAAGGCTACTCTGGTA 493 Query 674 TCCGATTTGAGATTCTCGAAGCAATTACCAGTTTCCTCAACAACAACATCACTCCATCT- 732 | || |||||||| |||||||| || || | ||||||||| || ||||| || || Sbjct 494 TACGCTTTGAGATACTCGAAGCCATCACAAAATTCCTCAACCGGAAAATCACACC-GCTC 552 Query 733 CTCCCCCTCCGTGGTACAATCACCGCCTCCGGAGATCTCGTTCC-TCTCTCCTACATCGC 791 ||||| ||||| || || || ||||||||||| || |||||||| | | || || || | Sbjct 553 CTCCCTCTCCGAGGCACCATTACCGCCTCCGGCGACCTCGTTCCAT-TATCGTATATTGT 611 Query 792 CGGACTTCTCACCGGTCGTCCCAATTCCA-AAGCTACTGGTCCCA-ACGGTGAAGCT-TT 848 ||| |||||| ||| || ||||| | || | || ||| |||| ||| | || | | Sbjct 612 TGGATTTCTCATCGGGCGCCCCAACT-CACGATCT-TTGGGCCCATCCGGCG-AGATCCT 668 Query 849 AACAGCAGAGGAAGCTTTCAA-ATTAGCAGGA--ATCAGCTCCGGATTCTTT-GATCTCC 904 || || ||| || ||||| || || ||| |||| ||| || ||| || |||| Sbjct 669 CACCGCCTCGGAGGCCTTCAAGCTT-GCCGGAGTATCA--TCC---TT-TTTCGAACTCC 721 Query 905 AGCCTAAGGAAGGTCTCGCGCTAGTCAATGGCACGGCGGTTGGATCTGGAATGGCGTCAA 964 |||| |||||||| || ||||| || ||||| || ||||| ||||||| | || || | Sbjct 722 AGCCCAAGGAAGGGCTTGCGCTCGTGAATGGGACTGCGGTGGGATCTGCTTTAGCCTCCA 781 Query 965 TGGTGTTATTCGAAACGAATGTTCTCTCTGTTTTGGCTGAGATT-TTGTCGGCGGT-TTT 1022 | | | | ||| | || || | | ||||| || ||| || | ||||| | ||| Sbjct 782 CGTTACTGTACGATGCCAACATTTTGGCGGTTTTTGCGGAGGTTGCT-TCGGCCATGTTT 840 Query 1023 CGCAGAGGTGATG-AGTGGTAAGCCTGAGTTCACCGATCATCTCACTCACAGACTTAAAC 1081 || ||||| ||| || || || || ||||| || |||||||| || || | ||| || | Sbjct 841 -GCTGAGGTTATGCAG-GGGAAACCGGAGTTTACGGATCATCTTACGCATAAACTCAAGC 898 Query 1082 ATCATCCCGGTCAAATCGAAGCGGCGGCGATAATGGAGCATATCCTCGACGGAAGCTCGT 1141 | ||||| ||||| || ||||| || || || |||||||||||| | ||||||||||| | Sbjct 899 ACCATCCTGGTCAGATAGAAGCCGCCGCAATCATGGAGCATATCTTAGACGGAAGCTCTT 958 Query 1142 ACATGAAATTAGCTCAGA-AGCTTCACGAGATGGATCCG-TTACAGAAACCTAAACAAGA 1199 | | ||| |||||| | | || ||| |||| |||||| || ||||||||||||||||| Sbjct 959 ATGTCAAAGAAGCTCA-ACATCTCCACAAGATTGATCCGCTT-CAGAAACCTAAACAAGA 1016 Query 1200 TCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCAAATCGAAGTGATCCGTT- 1258 |||||||||||| || || || || |||||| | || || || || || ||||| | Sbjct 1017 TCGTTACGCTCTGCGAACGTCGCCGCAATGGCTCGGACCACAGATTGAGGTGATAAGAGC 1076 Query 1259 ACGCAACGAA-ATCGATCGAGCGTGAGATTAACTCCGTCAACGATAATCCGTTGATCGAT 1317 | || || || || |||||| |||||||| ||||| || |||||||| || ||||||||| Sbjct 1077 A-GCGACAAAGAT-GATCGAACGTGAGATAAACTCGGTAAACGATAACCCTTTGATCGAT 1134 Query 1318 GTTTCGA-GGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTC 1376 ||||| | ||||||| || ||||||||||| || ||||| || ||||| || || || | Sbjct 1135 GTTTC-ACGGAACAAAGCTATTCACGGTGGGAATTTCCAGGGGACACCGATTGGTGTCGC 1193 Query 1377 AATGGATAACACGAGAT-TGGCGA-TAGCAGCGATTGGTAAACTCATGTTTGCTCAATTC 1434 ||||||||||| | | | || | | || || | || || || ||||| ||||| ||| Sbjct 1194 CATGGATAACACTCG-TCTAGC-ACTTGCTTCGGTCGGGAAGCTAATGTTCGCTCAGTTC 1251 Query 1435 TCAGAGCTTGTGAATGATTTCTACAACAATGGTTTACCCTCGAATCTAACCG-CTTCGAG 1493 | || || || ||||||| ||||||||| || |||||||| |||||| | | | ||| Sbjct 1252 ACTGAACTCGTAAATGATTACTACAACAACGGGTTACCCTCTAATCTATCTGGCGG-GAG 1310 Query 1494 GAATCCAAGT-TTGGATTATGGATTCAAGGGAGCTGAGATT-GCAATGGCTTCTTATTGT 1551 || || ||| ||| |||| || || || || || || | | || |||||||||||||| Sbjct 1311 AAACCCTAGTCTTG-ATTACGGGTTAAAAGGCGCAGA-AGTAGCCATGGCTTCTTATTGC 1368 Query 1552 TCAGAGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTC-AAT-CAGCAGAGCAAC 1609 ||||||||||| | |||||||||||||||||| | |||||| | || | || ||||| Sbjct 1369 TCAGAGCTTCAGTTCTTAGCTAATCCTGTGACGAACCATGT-CGAAAGC-GCCTCGCAAC 1426 Query 1610 ATAACCAAGATGTCAACTCT-TTGGGACTAATCTCGT-CTCGCAAA-ACTTCTGAAGCTG 1666 | || |||||||| |||||| ||||| || |||||| | || ||| || | ||||||| Sbjct 1427 ACAATCAAGATGTTAACTCTCTTGGG-CTGATCTCGAGC-CG-AAAGACAGCAGAAGCTG 1483 Query 1667 TTGATATTCTCAAGCTTATGTCAACAAC 1694 | | ||| |||||||| ||||||||||| Sbjct 1484 TGGTTATCCTCAAGCTCATGTCAACAAC 1511 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 95377973480 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5