BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G37520.1
Length=3246
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482747 jgi|Araly1|482747|fgenesh2_kg.4__1807__AT2G37520.1 2872 0.0
Ahg898302 jgi|Araly1|898302|Al_scaffold_0005_2268 968 0.0
> Ahg482747 jgi|Araly1|482747|fgenesh2_kg.4__1807__AT2G37520.1
Length=2846
Score = 2872 bits (1555), Expect = 0.0
Identities = 1678/1737 (97%), Gaps = 9/1737 (1%)
Strand=Plus/Plus
Query 1425 TGGTCCTGGTCTTGATGAGAGTCAGAGCCTTACTCCATGCTCTGTGGAGAACCATTATTT 1484
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1097 TGGCCCTGGTCTTGATGAAAGTCAGAGCCTTACTCCATGCTCTGTGGAGAACCATTATTT 1156
Query 1485 TTCAGAGAAAACATATGCAAAGGACACATTAGATGAGCCGAAGCGGATAGCAAAGAAGCT 1544
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157 TCCAGAGAAAACATATGCAAAGGACACATTAGATGAGCCGAAGCGGATAGCAAAGAAGCT 1216
Query 1545 TACTTCTCATGTATCTGGTACGGGTTGCCATAAGAAAGTTTCTGAAGGAAGCAATAGAAA 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1217 TACTTCTCATGTATCTGGTACGGGTTGCCATAAGAAAGTTTCTGAAGGAAGCAATAGAAA 1276
Query 1605 AAGGGATAATGATTTACATCGGTTGCTGTTTATGCCTAATGGACTTCCAGACGGGACTGA 1664
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1277 GAGGGACAATGATTTACATCGGTTGCTGTTTATGCCTAATGGACTTCCAGACGGGACTGA 1336
Query 1665 ATTGGCTTACTATGTGAAAACGCAGAAACTACTACAGGGTTACAAGCAAGGAAGTGGTAT 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1337 ATTGGCTTACTATGTGAAAACGCAGAAACTACTACAGGGTTACAAGCAAGGAAGTGGTAT 1396
Query 1725 AGTATGTAGCTGCTGCAGTAGAGAGATTAGTCCTTCGCAATTTGAAGCGCATGCTGGAAT 1784
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1397 AGTATGTAGCTGCTGCAGCAGAGAGATTAGTCCTTCGCAATTTGAAGCGCATGCTGGAAT 1456
Query 1785 GGCGGCTAGACGACAACCTTATCGACATATCTTCATCTCTTCTGGATTGTCATTGCATGA 1844
||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1457 GGCTGCTAGACGACAACCTTATCGTCATATCTTCATTTCTTCTGGATTGTCATTGCATGA 1516
Query 1845 TATAGCCATGTCACTGGCCAATGGACATGTCATTACAACTGGTGATAGTGATGACATGTG 1904
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1517 TATAGCCATGTCACTGGCCAATGGACATGTCATTACAACTGGTGACAGTGATGACATGTG 1576
Query 1905 TTCTATTTGTGGGGATGGTGGAGATTTGTTACTTTGTGCTGGATGTCCTCAAGCATTTCA 1964
||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1577 TTCCATTTGTGGGGATAGTGGAGATTTGCTACTTTGTGCTGGATGTCCTCAAGCATTTCA 1636
Query 1965 TACAGCTTGTTTGAAATTTCAGTCTATGCCTGAAGGTACTTGGTACTGTTCGAGCTGCAA 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1637 TACAGCTTGTTTGAAATTTCAGTCTATGCCTGAAGGTACTTGGTACTGTTCGAGCTGCAA 1696
Query 2025 TGATGGACCTATCTCTAGTAAAAAGGCTACTACTACTGATCCTTCTGGCAACGCTAGGCC 2084
|||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1697 TGATGGACCTATTTCTTGTAAAAAGGCTACTGCTACTGATCCTTCTGGCAACGCTAGGCC 1756
Query 2085 TATAGTTATAAGACTCTCAAGAGTCGTGAAAGCGCCAGAAAGCGATATTGGTGGCTGTGT 2144
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1757 TATAGTTATAAGACTGTCAAGAGTCGTGAAAGCGCCAGAAAGCGAAATTGGGGGCTGTGT 1816
Query 2145 GTTCTGCAGGTCCCATGATTTTAGCATTGGAAAATTTGATGATAGGACTGTTATTCTCTG 2204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1817 GTTCTGCAGGTCCCATGATTTTAGCATTGGAAAATTTGATGATAGGACTGTTATTCTCTG 1876
Query 2205 TGACCAGTGTGAGAAAGAGTACCATGTTGGTTGCCTGAGAGAGAACGGGTTCTGTGATTT 2264
||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||
Sbjct 1877 TGACCAGTGTGAGAAAGAGTACCATGTTGGTTGCCTGAGGGAGAATGGGCTCTGTGATTT 1936
Query 2265 GAAAGAAATCCCGCAGGAGAAATGGTTCTGCTGTAGCAATTGCAGCAGGATTCACACGGC 2324
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1937 GAAAGAAATCCCGCAGGAGAAATGGTTCTGCTGTAGCGACTGCAGCAGGATTCACACGGC 1996
Query 2325 AGTTCAGAATTCTGTTTCTTGTGGGCCACAAACTCTTCCTACACCTTTGTTAGACATGAT 2384
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 1997 AGTTCAGAATTCTGTTTCTTGTGGGCCACAAACTATTCCTACTCCTTTGTTAGACATGAT 2056
Query 2385 ATGCAGAAAAGACAGAGAAAAAGGAATATTTACCGATATTGGGGATACAGTCGAATGGAG 2444
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 2057 ATGCAGAAAAGACAGAGAAAAAGGAATATTTACCGATAATGGGGATATAGTCGAATGGAG 2116
Query 2445 AATACTTAGTGGAAAAAGTCGATACCCAGAGCATCTGCCTTTGCTTTCACGAGCGGCTGT 2504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2117 AATACTTAGTGGAAAAAGTCGATACCCAGAGCATCTGCCTTTGCTTTCACGAGCGGCTGT 2176
Query 2505 TATCTTCAGGGAGTGTTTTGATCCCATTGTTGCAAAGTCTGGCCGTGATCTGATTCCTGT 2564
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2177 AATCTTCAGGGAGTGTTTTGATCCCATTGTTGCAAAGTCTGGCCGCGATCTCATTCCTGT 2236
Query 2565 CATGGTGTATGGGAGAAATATATCTGGCCAGGAGTTTGGAGGAATGTACTGTTTGGTCCT 2624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2237 CATGGTGTATGGGAGAAATATATCTGGCCAGGAGTTTGGAGGAATGTACTGTTTGGTCCT 2296
Query 2625 GATAGTAAATTCTCTTGTTGTTTCTGCTGCGCTGCTGAGGATATTTGGTCAGGAAGTTGC 2684
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2297 GATTGTAAATTCTCTTGTTGTTTCTGCTGCGCTGCTGAGGATATTTGGTCAGCAAGTTGC 2356
Query 2685 TGAACTTCCTATAGTGGCCACAAGCCGAGAGTACCAAGGAAGGGGATACTTCCAAGGGCT 2744
|||||||||||| || || || ||||||||||||||||||||||| ||||||||||||||
Sbjct 2357 TGAACTTCCTATTGTAGCGACTAGCCGAGAGTACCAAGGAAGGGGCTACTTCCAAGGGCT 2416
Query 2745 GTATGCCTGTGTAGAGAATCTTCTTTCTTCTTTAAATGTTGAGAACCTGGTTCTTCCGGC 2804
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2417 GTATGCTTGTGTAGAGAATCTTCTTTCTTCTTTAAATGTTGAGAACCTGGTCCTTCCGGC 2476
Query 2805 AGCTGAAGAAGCAGAGTCTATATGGACAAAGAAGTTTGGCTTTACAAAGATGTCTGACCA 2864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2477 AGCTGAAGAAGCAGAGTCTATATGGACAAAGAAGTTTGGCTTTACAAAGATGTCTGACCA 2536
Query 2865 GCAATTGCAGGAGTACCAAAAGGAAGTGCAGCTTACAATATTCAAAGGAACCTCAATGCT 2924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2537 GCAATTGCAGGAGTACCAAAAGGAAGTGCAGCTTACAATATTCAAAGGAACCTCAATGCT 2596
Query 2925 GGAGAAGAAAGTACCTAAGGCGACAACGGGTTTATCAGAATCTACAACTCTCATCTGATC 2984
||||||||||||||||||| |||| | | |||||||||||| ||||||||||||| |||
Sbjct 2597 GGAGAAGAAAGTACCTAAGACGACGA-G--TTTATCAGAATCAACAACTCTCATCTCATC 2653
Query 2985 TGTTTCGTTAAAAGATTCGTCAAGATTTTGGTGTTCGGATCTTTCCTCTTCtttgttttt 3044
|| | | ||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 2654 TGAT-CATTAAAAGATTCGTCAAGATTTTGGTGTCCGGATCTTTCCTCTTCTCTGTTTTT 2712
Query 3045 --gttttctggaagatggaaccgttttttggtaa-ttttttgtaatatttttgAATATAG 3101
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 2713 TTGTTTTCTGGAAGATGGAACAGTTTTTTGGTAACTTTTTTGTAATATTTTTGAATATAG 2772
Query 3102 ATAGTAGGTTTTACAAAGAAGTCCCAGAACAGTTCCATGTTTT-GTATAGAGACCAA 3157
||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 2773 ATAGTAGGTTT-ACAAAGAAGTCACAGAACAGTTCCATGTTTTTGTATAGAGACCAA 2828
Score = 1382 bits (748), Expect = 0.0
Identities = 937/1025 (91%), Gaps = 25/1025 (2%)
Strand=Plus/Plus
Query 420 AGATCTAACTCAAGTTAGTGTT-ACTGTTGTGTCTATTGGATGCAATCGTGTTGTGATAT 478
|||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||
Sbjct 1 AGATCTAACTCAAGTTAGTGTTAAGTGTTGTGTCTATTGTATGCAATCGTGTTGTGATAT 60
Query 479 TGAATATATTTCTGATGGGAGAAGGAACTATTTGTTTGGAGATGCCAAAGGAAGAGAA-T 537
||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
Sbjct 61 TGAATCTATTTCTGATGGGAGAAGGAATTATTTGTTTGGAGATGCCAATGGAAGAGAATT 120
Query 538 GGTCAATTGAAAAGAGATAGGCTTGATGATGATAC-TGATGAAGGTAATAAAGGAGATCA 596
|||| || | || || || | || ||||||| |||||||||| |||||
Sbjct 121 CATCAA-TG-GGTCA-ATTCAAAAGA-GA-GCGACTTGATGAAAGTAATAAAGGTGATCA 175
Query 597 CTTTCCCAGTAAGAAACAAGCTAAAGAAGCTTCTAATGATGACATTACATCGGAGATTTC 656
|||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 176 CTTTCCCAATAAGAAACAAGCCAAAGAAGCTTCTAACGATGACATTACATCGGAGATTTC 235
Query 657 AAATCCAGTCGCTTCTCCGGTTGAAAGCACGTCTCTTTTTCGTGATGTCTCTAGCCAGCC 716
|||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 236 AAATCCCGTCGCATCTCCGGTTGAAAGCACGTCACTTTTTCGTGATGTCTCTAGTCAGCC 295
Query 717 GGTTAAATCCGGTTTAGTTGAGTGCTCCGGGAGTGATTTTGGGTCCGAAGAGACTGTAAG 776
| ||||||||||||||| |||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 296 GATTAAATCCGGTTTAGGTGAGTGCTCCGGAAGTGATTTTGGTTCCGAAGAGACTGTTAG 355
Query 777 TGACGATGCATCCGTTGTAGGTAGCTCACAAACAGAGCAGTCGAGTGATGTTTTACCATC 836
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 TGACGATGCATCCGTAGCAGGTAGCTCACAAACAGAGCAGTCGAGTGATGTTTTACCATC 415
Query 837 TCGTTTTGTGTTGGAGATTCCTAAGCATCTTAGCTCGACTGGGATCACGAAGATCACGTT 896
|||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 416 TCGTTTTGTGCTGGAGATTCCTAAGCATCTAAGCTCGACTGGGATCACGAAAATCACGTT 475
Query 897 TAAGTTGAGTAAACCAAAGAAGGAATTTGATGATTTGCCTTTGATAAAGGATCATACTTG 956
||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||
Sbjct 476 TAAGTTGAGTAAACCAAAGCAGGAATTTGATGATTTGCCGGTGATAAAGGATCACACTTG 535
Query 957 GGACGCTGGTGTTGTGAAGATGCCGAAGAAAAAGATTGTTTCTTTGAGCTACCCATCTAA 1016
|||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 536 TGACGGTGGTGTTGTGAAGATGCCGAAG---AAGATTGTTTCTTTGAGCTACCCATCTAA 592
Query 1017 TGTCAAGAAGCTATTGGAAACGGGTATACTTGAAGGAGCTCGAGTGAAGTATATTTCAAC 1076
||| ||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||
Sbjct 593 TGTGAAGAAGCTATTAGAAACGGGTATACTTGTAGGCGCTCCAGTGAAGTATATTTCAAC 652
Query 1077 CCCACCTGTGAGACAGCTTCTGGGGATAATCCATTCGGGTGGCTATTTGTGTGGCTGTAC 1136
||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 653 CCCACCTGTGAGAGAGCTTCAGGGGATAATCCATTCGGGTGGGTATTTGTGTGGCTGTAC 712
Query 1137 AACTTGCAATTTCTCGAAAGTTCTAAGTGCGTATGAGTTTGAGCAGCATGCTGGTGCAAA 1196
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 713 AACGTGCAGTTTCTCGAAAGTTCTAAGTGCGTATGAGTTTGAGCAGCATGCTGGTGCAAA 772
Query 1197 AACTAGACATCCTAATAATCACATATTTTTGGAGAATAGAAGGGCGGTTTATAACATAGT 1256
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 773 AACTAGACATCCTAATAATCACATATTTTTGGAGAATGGAAGGGCGGTTTATAATATAGT 832
Query 1257 TCAAGAACTGAAGACTGCTCCTCGTGTTGTTCTCGAGGAAGTGATAAGGAATGTAGCTGG 1316
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 833 TCAAGAACTGAAGACTGCTCCTCGTGATGTTCTCGAGGAAGTGATAAGGAATGTAGCTGG 892
Query 1317 TTCTGCTCTGAATGAGGAGGGCTTACGAGCTTGGAAAG-------C-A--A-GTTTCCAA 1365
||||||||||||||| |||||||||| ||||||||||| | | | ||||||||
Sbjct 893 TTCTGCTCTGAATGAAGAGGGCTTACAAGCTTGGAAAGGTGATGGCCAGCAAGTTTCCAA 952
Query 1366 CAGAGTAATAGCATGTCTGACCGGAATTATATTACGGATCATTCCACTGTCAGT--TAT- 1422
|||||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||
Sbjct 953 CAGAGTAATAGCATGTCTGACCGGAACCATATCACGGAACATTCCACTGTCAGTGATATA 1012
Query 1423 CTTGG 1427
|||||
Sbjct 1013 CTTGG 1017
> Ahg898302 jgi|Araly1|898302|Al_scaffold_0005_2268
Length=2505
Score = 968 bits (524), Expect = 0.0
Identities = 900/1079 (83%), Gaps = 36/1079 (3%)
Strand=Plus/Plus
Query 1009 CCATCTAATGTCAAGAAGCTATTGGAAACGGGTATACTTGAAGGAGCTCGAGTGAAGTAT 1068
||||||||||| ||||||||||||| ||||| || || || || ||||| ||||||||
Sbjct 526 CCATCTAATGTGAAGAAGCTATTGGCGACGGGGATCCTCGATGGTGCTCGGGTGAAGTAC 585
Query 1069 ATTTCAACCCCACCTGTGAGACAGCTTCTGGGGATAATCCATTCGGGTGGCTATTTGTGT 1128
|||||| | |||||| ||| |||||| ||||||||||| |||||||| |||||||||
Sbjct 586 CTTTCAATCTCACCTGCAAGAGAGCTTCAAGGGATAATCCACTCGGGTGGGTATTTGTGT 645
Query 1129 GGCTGTACAACT-TGCAATTTCTCGAAAGTTCTAAGTGCGTATGAGTTTGAGCAGCATGC 1187
|||||||| | ||| ||||||||||||||||| |||| |||||||| |||| ||||||
Sbjct 646 GGCTGTAC-TGTCTGCGATTTCTCGAAAGTTCTAGGTGCCTATGAGTTCGAGCGGCATGC 704
Query 1188 TGGTGCAAAAACTAGACATCCTAATAATCACATATTTTTGGAGAATAGAAGGGCGGTTTA 1247
||||| |||||| | ||| |||||||||||||||| | ||||||| || || |||||||
Sbjct 705 TGGTGGAAAAACAAAACACCCTAATAATCACATATATCTGGAGAACGGACGGCCGGTTTA 764
Query 1248 TAACATAGTTCAAGAACTGAAGACTGCTCCTCGTGTTGTTCTCGAGGAAGTGATAAGGAA 1307
||||||| ||||||| |||| | |||||| | || ||| | ||||| |||||||||||
Sbjct 765 TAACATAATTCAAGAGCTGAGGGTTGCTCCCCCTGACGTTTTGGAGGAGGTGATAAGGAA 824
Query 1308 TGTAGCTGGTTCTGCTCTGAATGAGGAGGGCTTACGA-GCTTGGAAAGCAAGTTTCCAAC 1366
|| |||||||||||||||| |||||||| || | | |||||||||| ||||||||| |
Sbjct 825 AGTGGCTGGTTCTGCTCTGAGCGAGGAGGGATTTC-AGGCTTGGAAAGAAAGTTTCCAGC 883
Query 1367 -AGAGTAATAGC-A-TGTCTGACCGGAATTATATTACGGATCATTCCAC-TGTCAGTTAT 1422
||| | ||||| | | | | || | | |||| || ||| ||| | ||| ||||||
Sbjct 884 AAGA-TGATAGCAACCATATCA-TGG-A-T-TATT-CGTTTCAATCC-CTTGTTAGTTAT 936
Query 1423 CTTGG-TC---CTGG--TCTTGATGAGAGTCAGAGCCT-TACTCCATGCTCTGTGGAGAA 1475
| ||| || ||| ||||||||||||||| || || |||||||| | | ||||||
Sbjct 937 CCTGGTTCTGGTTGGTCTCTTGATGAGAGTCAAAG-CTCTACTCCATATTTTCCGGAGAA 995
Query 1476 CCATTATTTTTCAGAGAAAA-CATATGCAAAGGACACATTAGATGAGCCGAAGCGGATAG 1534
| |||||||| |||||||| || | ||||||||||| | | || | |||| | ||
Sbjct 996 CAATTATTTTAGAGAGAAAATCA-GTACAAAGGACACACCACACGAACATAAGCCAAAAG 1054
Query 1535 CAAAGAAGCTTACTTCTCATGTATCTGGTACGGGTTGCCATAAGAAAGTTTCTGAAGGAA 1594
|||||||| |||| |||||| | | ||||| ||||||||||||||||| | | | |||
Sbjct 1055 CAAAGAAGGTTACCTCTCATATGTTTGGTATGGGTTGCCATAAGAAAGCTGCCGGAGGCG 1114
Query 1595 G-CAATAGAAAAAGGGATAATGATTTACATCGGTTGCTGTTTATGCCTAATGGACTTCCA 1653
| ||| | || ||||| ||||||||||| |||||||||||| |||| ||||| || |||
Sbjct 1115 GTAAAT-GGAAGAGGGACAATGATTTACACCGGTTGCTGTTTTTGCCAAATGGGCTACCA 1173
Query 1654 GACGGGACTGAATTGGCTTACTATGTGAAAACGCAGAAACTACTACAGGGTTACAAGCAA 1713
|| ||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||
Sbjct 1174 GATGGGACTGAATTGGCTTACTTTGTGAAATCACAGAAACTACTGCAGGGTTACAAGCAA 1233
Query 1714 GGAAGTGGTATAGTATGTAGCTGCTGC-AGTAGAGAGATTAGTCCTTCGCAATTTGAAGC 1772
||||||||||||||||||||||||||| | | ||||||||||||||| ||||| |||||
Sbjct 1234 GGAAGTGGTATAGTATGTAGCTGCTGCGAC-ACAGAGATTAGTCCTTCACAATTCGAAGC 1292
Query 1773 GCATGCTGGAATGGC-GGCTAGACGACAACCTTATCGACATATCTTCATCTCTTCTGGAT 1831
|||||||||||||| || |||||||||||||||||| |||||| ||| ||||||||||
Sbjct 1293 ACATGCTGGAATGGCTGG-TAGACGACAACCTTATCGTCATATCCACATTTCTTCTGGAT 1351
Query 1832 TGTCATTGCATGATATAGCCATGTCACTGGCCAATGGA--C-ATGTCATTACAACTGGTG 1888
|||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||
Sbjct 1352 TGTCATTGCATGATATAGCCATGTCATTGGCGGATGGGGGCCATGTCATTACAACTGGTG 1411
Query 1889 ATAGTGATGACATGTGTTCTATTTGTGGGGATGGTGGAGATTTGTTACTTTGTGCTGGAT 1948
| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||
Sbjct 1412 ACAGTGATGACATGTGTTCTATTTGTGGCGATGGTGGAGATTTGCTACTCTGTGCTGGAT 1471
Query 1949 GTCCTCAAGCATTTCATACAGCTTGTTTGAAATTTCAGTCTATGCCTGAAGGTACTTGGT 2008
|||||||||||||||||||||| || ||||||||||| || |||||||||||||||||||
Sbjct 1472 GTCCTCAAGCATTTCATACAGCATGCTTGAAATTTCAATCAATGCCTGAAGGTACTTGGT 1531
Query 2009 ACTGTTCGAGCTGCAATGATGGACCTATCTCTAGTAAAA-AGGCTACTACTACTGATCC 2066
||||||| || |||||||||||||||| |||| |||||| || | ||| ||||||||||
Sbjct 1532 ACTGTTCAAGGTGCAATGATGGACCTACCTCTTGTAAAACAGCC-ACTGCTACTGATCC 1589
Score = 885 bits (479), Expect = 0.0
Identities = 694/799 (87%), Gaps = 9/799 (1%)
Strand=Plus/Plus
Query 2146 TTCTG-CAGGTCCCATGATTTTAGCATTGGAAAATTTGATGATAGGACTGTTATTCTCTG 2204
||||| ||||| | ||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1680 TTCTGATAGGTCACTTGATTTTAGCATTGGGAAATTTGATGATAGGACAGTTATTCTCTG 1739
Query 2205 TGACCAGTGTGAGAAAGAGTACCATGTTGGTTGCCTGAGAGAGAACGGG-TTCTGTGATT 2263
|||||||||||||||||||||||| || ||||| || || || || | || |||||||
Sbjct 1740 TGACCAGTGTGAGAAAGAGTACCACGTCGGTTGTCTCAGGGAAAATGATCTT-TGTGATT 1798
Query 2264 TGAAAGAAATCCCGCAGGAGAAATGGTTCTGCTGTAGCAATTGCAGCAGGATTCACACGG 2323
|||||| ||||| || || ||||||||||||||||| | |||||||||||||||||||
Sbjct 1799 TGAAAGGTATCCCCCAAGATAAATGGTTCTGCTGTAGTGACTGCAGCAGGATTCACACGG 1858
Query 2324 CAGTTCAGAAT-TCTGTTTCTTGTGGGCCACAAACTCTTCCTACACCTTTGTTAGACATG 2382
| |||| || |||| ||| ||||||||||||||| ||||||| ||||||||||| |
Sbjct 1859 CTCTTCA-AAGCTCTGCTTCGTGTGGGCCACAAACTATTCCTACGGTTTTGTTAGACACG 1917
Query 2383 ATATGCAGAAAAGACAGAGAAAAAGGAATATTTACCGATATTGGGGATACAGTCGAATGG 2442
||| |||||||| |||||||||||||||||| || || | ||| ||||| || ||||||
Sbjct 1918 ATAAGCAGAAAATACAGAGAAAAAGGAATATGTATTGACAATGGAGATACTGTGGAATGG 1977
Query 2443 AGAATACTTAGTGGAAAAAGTCGATACCCAGAGCATCTGCCTTTGCTTTCACGAGCGGCT 2502
|| || |||||||||||||||||||||||||||||||| || || ||||||||||| |||
Sbjct 1978 AGGATGCTTAGTGGAAAAAGTCGATACCCAGAGCATCTACCCTTACTTTCACGAGCAGCT 2037
Query 2503 GTTATCTTCAGGGAGTGTTTTGATCCCATTGTTGCAAAGTCTGGCCGTGATCTGATTCCT 2562
||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct 2038 ACTATTTTCAGGGAGTGTTTTGATCCCATTGTGGCAAAGTCTGGTCGTGATCTCATTCCT 2097
Query 2563 GTCATGGTGTATGGGAGAAATATATCTGGCCAGGAGTTTGGAGGAATGTACTGTTTGGTC 2622
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 2098 GTCATGGTCTATGGGAGAAATATATCAGGCCAGGAGTTTGGAGGAATGTACTGCTTGGTC 2157
Query 2623 CTGATAGTAAATTCTCTTGTTGTTTCTGCTGCGCTGCTGAGGATATTTGGTCAGGAAG-T 2681
||||| || ||||| |||||||||||||| |||||||| ||||||||||||||| ||| |
Sbjct 2158 CTGATGGTGAATTCCCTTGTTGTTTCTGCCGCGCTGCTTAGGATATTTGGTCAG-AAGGT 2216
Query 2682 TGCTGAACTTCCTATAGTGGCCACAAGCCGAGAGTACCAAGGAAGGGGATACTTCCAAGG 2741
||| ||||||||||| || || |||||||||||||| || |||||||| ||||| |||||
Sbjct 2217 TGCAGAACTTCCTATTGTAGCTACAAGCCGAGAGTATCAGGGAAGGGGCTACTTTCAAGG 2276
Query 2742 GCTGTATGCCTGTGTAGAGAATCTTCTTTCTTCTTTAAATGTTGAGAACCTGGTTCTTCC 2801
||||| ||| || || |||||||||||||| ||| | |||||||||||| || |||| ||
Sbjct 2277 GCTGTTTGCTTGCGTTGAGAATCTTCTTTCCTCTCTGAATGTTGAGAACTTGATTCTCCC 2336
Query 2802 GGCAGCTGAAGAAGCAGAGTCTATATGGACAAAGAAGTTTGGCTTTACAAAGATGTCTGA 2861
|||||||||||||| |||||||| ||||||||||| |||||||| ||||||||| ||||
Sbjct 2337 AGCAGCTGAAGAAGCTGAGTCTATCTGGACAAAGAAATTTGGCTTCACAAAGATGACTGA 2396
Query 2862 CCAGCAATTGCAGGAGTACCAAA-AGGAAGTGCAGCTTACAATATTCAAAGGAACCTCAA 2920
|| | ||| ||| ||||||| | || ||||||| |||||||||||||||||||| || |
Sbjct 2397 ACATCGATTACAGAAGTACCAGAGAG-AAGTGCAACTTACAATATTCAAAGGAACATCGA 2455
Query 2921 TGCTGGAGAAGAAAGTACC 2939
|||| ||||||||||||||
Sbjct 2456 TGCTCGAGAAGAAAGTACC 2474
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122507327487
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5