BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G40400.1 Length=2425 Score E Sequences producing significant alignments: (Bits) Value Ahg483095 jgi|Araly1|483095|fgenesh2_kg.4__2155__AT2G40400.1 3773 0.0 Ahg486055 jgi|Araly1|486055|fgenesh2_kg.5__2047__AT3G56140.1 1940 0.0 > Ahg483095 jgi|Araly1|483095|fgenesh2_kg.4__2155__AT2G40400.1 Length=2415 Score = 3773 bits (2043), Expect = 0.0 Identities = 2307/2430 (95%), Gaps = 35/2430 (1%) Strand=Plus/Plus Query 3 AGCAATGCAAAAAGCTGACGTGTACCAATGAAGCCCACGACCAATGGTGGGCTCTTGGCT 62 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 AGCAATGCAAAAAGCTGACGTGTACCAATGAAGCCCACGACCAA---TGGGCTCTTGGCT 57 Query 63 TCTCAATCATCTTCCTCCTTCTCGTTTCCGAGATTCCGCGGCCAACTTCCGATTATCTTC 122 || | || | | | | | |||||||||||||||||||||||||||||||||||||| Sbjct 58 TC-C--TC--C-T--T-C--C-CGTTTCCGAGATTCCGCGGCCAACTTCCGATTATCTTC 105 Query 123 TCAGCCAATAATAATCAGAAGAAGAAGAA-T-CTT-CCAAATCCAAACGTCGTCACTCTT 179 |||||||||||||||||||||| |||||| | || |||||||||||||||||||||||| Sbjct 106 TCAGCCAATAATAATCAGAAGACGAAGAAGTATTTCCCAAATCCAAACGTCGTCACTCTT 165 Query 180 TGTCTCCACTCTCATTCCAATGTCTCCTCCTCTCAAATCGCCGTCACTCGCCGCGCAATT 239 || ||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct 166 TGCCTCCACTCTGATTCCGATGTCTCTTCCTCTCAAATCGCCGTCACTCGCCGCGCAATT 225 Query 240 CTCGTCGCACCACCGCTCCTCGCCGCCGCCGCTTCGTTGTTTCTCTCTATTTCCTCAGCT 299 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 226 CTCGTCGCACCACCGCTCCTCGCCGCCGCTGCTTCGTTGTTTCTCTCTATTTCCTCAGCT 285 Query 300 GCCTCTGCTGAGACTTCTG-CGGAATCAGTAG------CT-CT--TCCTCCTGTTG-C-T 347 || |||||||||||||| | |||||||||||| || || ||||||||||| | | Sbjct 286 GCTTCTGCTGAGACTTC-GACGGAATCAGTAGCTCTTCCTCCTCCTCCTCCTGTTGCCGT 344 Query 348 -ACTGCTCCTCCTCCTCCGCCTGTGGAGAAGGAAGAGGCGATAACTTCTAGAATCTATGA 406 |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 345 CACTGCTCCACCTCCGCCGCCTGTGGAGAAGGAAGAGTTGATAACTTCTAGAATCTATGA 404 Query 407 CGCGTCTGTGCTTGGTGAGCCGATGGCTGTTGGGAAAGATAAGAAGAGAGTGTGGGAGAA 466 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 405 CGCGTCTGTGCTTGGTGAGCCGATGGCTGTTGGGAAAGATAAGAAGAGAGTTTGGGAGAA 464 Query 467 GCTATTGAATGCGAGGATTGTCTATCTCGGAGAAGCAGAACAAGTGCCTACAAGAGACGA 526 | | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 465 GTTGTTGAATGCGAGGATTGTGTATCTCGGAGAAGCAGAACAAGTGCCTACAAGAGACGA 524 Query 527 CAAGGTTCTCGAGCTCGAAATCGTGAGGAATTTGAGGAAGCGATGTATTGAGAGCGATCG 586 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 525 CAAGGTTCTTGAGCTCGAAATCGTGAGGAATTTGAGGAAGCGATGTATCGAGAGCGATCG 584 Query 587 TCAGTTATCTTTAGCATTGGAAGCATTTCCTCTTGATTTGCAGGAACAGTTAAACCAATA 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 585 TCAGTTATCTTTAGCATTGGAAGCATTTCCTCTTGATTTGCAGGAACAGTTAAACCAATA 644 Query 647 CATGGACAAGAGGATGGATGGAGAGGTATTGAAGTCGTATGTATCACATTGGCCAGTCCA 706 |||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||| || Sbjct 645 CATGGATAAGAGGATGGATGCAGAGGTTTTGAAGTCGTATGTGTCACATTGGCCAGTTCA 704 Query 707 ACGTTGGCAAGAGTATGAGCCTCTCTTAAGTTACTGCCGCGATAACGGAGTTAAACTCAT 766 |||||||||||||||||||||||| ||||||||||| ||| | |||| |||||||||||| Sbjct 705 ACGTTGGCAAGAGTATGAGCCTCTGTTAAGTTACTGTCGCCAAAACGCAGTTAAACTCAT 764 Query 767 TGCTTGTGGCACTCCGCTCAAGGTTTTAAGAACTGTCCAAGCTGAGGGTATCCGTGGTCT 826 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 765 TGCTTGCGGCACTCCGCTCAAGGTTTTAAGAACTGTCCAAGCTGAGGGTATCCGTGGCCT 824 Query 827 ATCAGAGTCTGAGCGTAAATTATACACTCCTCCTGCGGGTTCAGGGTTTATCTCAGGGTT 886 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 825 ATCAGATTCTGAGCGTAAATTATACACTCCTCCTGCGGGTTCAGGGTTTATCTCAGGGTT 884 Query 887 TACTTCCTTCTCACGTAGTTCTTCACTCAATATGAATCCACTCACACAGATTGTTCCATT 946 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 885 TACTTCCTTCTCACGTAGTTCTTCACTCAATATGAATCCCCTCACACAGATTGTTCCATT 944 Query 947 TGGACCGAGTTCTTATTTGTCGGCACAAGCTAGAGTTGTTGAAGACCATACAATGTCTCA 1006 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct 945 TGGACCGAGTTCTTATTTGTCGGCGCAAGCTAGAGTTGTTGAAGACCATACTATGTCACA 1004 Query 1007 AGTTATTGTACAAGCAGTTGCAGATGGAGGTGGAACTGGTATGCTGGTAGTGGTGACAGG 1066 ||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct 1005 AGTTATTTTACAAGCAGTTGCAGATGGAGGTGGAACTGGTCTGCTTTTAGTGGTGACAGG 1064 Query 1067 GGCAAACCATGTTGAGTATGGGTCAAGGGGAACAGGATTGCCGGCAAGGATCTCTAGGAA 1126 ||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| Sbjct 1065 GGCAAACCATGTTGAGTATGGGTCAAGAGGAACAGGCTTGCCTGCAAGGATCTCTAGGAA 1124 Query 1127 GATTCCGAAGAAAAGTCAACTTGTTGTGTTACTTGATCCTGAAAGACAGTTTTTGCGGAA 1186 ||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct 1125 AATTCCCAAGAAAAGTCAACTTGTTGTATTACTTGATCCTGAAAGGCAGTTCTTGCGGAA 1184 Query 1187 AGAGGGTGAATCTCCAGTTGCTGATTTCTTGTGGTATTCTGCGGCCAGACCCTGCAGCAG 1246 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1185 AGAGGGTGAATCTCCAGTTGCTGATTTCTTGTGGTATTCTGTGGCCAGACCCTGCAGCAG 1244 Query 1247 AAACTGCTTTGACCGAGCAGAAATCGCTCGGGTAATGAATGCGGCTGGTAGGAGACGAGA 1306 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 1245 AAACTGCTTTGACCGAGCAGAAATCGCTCGTGTAATGAATGCAGCTGGTAGGAGACGAGA 1304 Query 1307 TGCCCTTCCCCAAGACATTCAAAAAGGATTAGACCTTGGTCTGGTGTCACCTGAGATTCT 1366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1305 TGCCCTTCCCCAAGACATTCAAAAAGGATTAGACCTTGGTCTGGTGTCACCTGAGATTCT 1364 Query 1367 GCAGAATTTCTTTGATTTGGAGCAATATCCTCTTATTTCAGAGCTTACACAACGGTTCCA 1426 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 1365 GCAGAATTTCTTTGATTTGGAGCAATATCCTCTTATTTCAGAGTTTACAAAACGGTTCCA 1424 Query 1427 GGGATTCCGAGAAAGGTTGTTGGCAGATCCCAAATTCTTGAATAGATTAGCTATTGAAGA 1486 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1425 GGGTTTCCGAGAAAGGTTGTTGGCAGACCCCAAATTCTTGAATAGATTAGCTATTGAAGA 1484 Query 1487 AGCTATATCAATAACAACAACACTTGTAGCTCAATATGAGAAGCGGAAAGAAAATTTCTT 1546 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 1485 AGCTATATCGATAACAACGACACTTGTAGCTCAATATGAGAAGCGGAAAGAAAACTTCTT 1544 Query 1547 TGAAGAACTCGACTATGTGATCACTGATAGCGTAAGAGCATCAGTTGTTGATTTTTTCAC 1606 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1545 TGAAGAACTCGACTATGTTATTACTGATAGCGTAAGAGCATCAGTTGTTGATTTTTTCAC 1604 Query 1607 AGTTTGGCTCCCTGCACCAACCTTGTCTTTTATCTCATATGCTGATGAGACAATTGGGCC 1666 ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 1605 AGTTTGGCTGCCTGCACCAACCTTGTCTTTTATCTCATACGCTGATGAGACAATTGGACC 1664 Query 1667 AAACAGCATAGATGCCTTAAGAGGCCTCCTAGGGTCCATACCTGACAATGCATTTCAAAA 1726 |||||||||||||||| ||| || ||||||||| |||||||||||||||||||||||||| Sbjct 1665 AAACAGCATAGATGCCCTAAAAGACCTCCTAGGATCCATACCTGACAATGCATTTCAAAA 1724 Query 1727 AAGTCTAGGTGGACAAGAGTGGACTCTGAGTCTTAGGATTGCTTCAGTTATTATCGGTGG 1786 |||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 1725 AAGTCTTGGTGGACAAGAGTGGACTCTGAATCTTAGGATTGCTTCAGTTATTGTCGGTGG 1784 Query 1787 CTTGAAGCTTGCTGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGATCTTCAAATGC 1846 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1785 CTTGAAGCTTGCTGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGATCTTCAAATGC 1844 Query 1847 TTTGTATGCAATACGAAAATTCATTAAACCAGAGTTGGGTGTTGGTGAGCAAGCAAAGAG 1906 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1845 TTTGTATGCAATACGAAAATTCATTAAACCAGAGTTGGGTGTTGGTGAGCAAGCAAAGAG 1904 Query 1907 GTCTCCTATGCTGAAGACGGCCCTTGTGTATGGAGGTTATCTGGGAACATCTTCGAATAT 1966 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1905 GTCTCCTATGCTGAAGACGGCCCTTGTGTATGGAGGTTATCTGGGAACATCTTCAAATAT 1964 Query 1967 CCGTTATCAGATAATTGCTGGGTTAATAGAGCATCGCATTTCTGACGAGCTTTCTTCTCA 2026 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1965 CCGTTATCAGATAATCGCTGGGTTAATAGAGCATCGCATTTCTGACGAGCTTTCTTCTCA 2024 Query 2027 ACCTCTACTTGTAAACATGATTTCATTTGTTGTTCGAGTAGCTAACTCCTACTTTGGAAC 2086 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2025 ACCTCTACTTGTAAACATGATTTCATTTGTTGTTCGAGTAGCTAACTCCTACTTTGGAAC 2084 Query 2087 TCAGCAATGGATTGATCTTGCGCGCTCTACGGGTCTGCAAACTCAGAAAAGTGTCACAAC 2146 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 2085 TCAGCAATGGATTGATCTTGCGCGCTCTACGGGTCTGCAGACTCAGAAAAGTGTCGCAAC 2144 Query 2147 TTCCAACCAAATCCCCGAGGTTGCGAGCCAATCCACAGTGGAATACAGTACAACTGAAGA 2206 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 2145 TTCCAACCAAATCCCCGAGGTTGGGAGCCAATCTACAGTGGAATACAGTACAACTGAAGA 2204 Query 2207 GGCAAGTATGGATGATCTTAAGAATCAATGAGATTTATGCGGCTATGTGACTAGGTACCA 2266 ||||||||| |||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct 2205 GGCAAGTATCGATGATCTCAAGAATCAATGATATTTATGCGGCTATGTGTCTAGGTACCA 2264 Query 2267 ATTG-TATATGTTTATAAAAGCTTTT-GATCGTATTGGAGGGAAAGATATATTCATTTGA 2324 | || ||||||||||||||||||||| | |||||||||||||||| |||||||||||||| Sbjct 2265 ACTGGTATATGTTTATAAAAGCTTTTTGGTCGTATTGGAGGGAAATATATATTCATTTGA 2324 Query 2325 GTTGTATTTTTGTATCTTAGCTTACGGGAAACAATGATTCGTGAATAAAATTTCTTCAAT 2384 |||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||| Sbjct 2325 GTTGTATTTT-GTATCTTAGCTTATGGGAAATAATGATTCGTGAATAAAATCTCTTCAAT 2383 Query 2385 TAGTCATGTTGGTTTGCCATATTTGCACAT 2414 ||||||||||| ||||| ||| |||||||| Sbjct 2384 TAGTCATGTTGATTTGCAATAATTGCACAT 2413 > Ahg486055 jgi|Araly1|486055|fgenesh2_kg.5__2047__AT3G56140.1 Length=2448 Score = 1940 bits (1050), Expect = 0.0 Identities = 1620/1891 (86%), Gaps = 55/1891 (3%) Strand=Plus/Plus Query 376 AGGAAGAGGCGATAACTTCTAGAATCTATGACGCGTCTGTG-C-TTGGTGAGCCGATGGC 433 |||||||| | ||||| || ||||||||||||||| | | | | |||||||||||||||| Sbjct 416 AGGAAGAGACTATAACCTCGAGAATCTATGACGCGAC-G-GCCATTGGTGAGCCGATGGC 473 Query 434 TGTTGGG-AAAGATAAGAAG-AGAGTGTGGGAGAAGCT-ATTGAATGCGAGGA-TTGTCT 489 | |||| |||||||||||| || |||||||||||||| | ||||||| | || |||| | Sbjct 474 T-ATGGGAAAAGATAAGAAGAAG-GTGTGGGAGAAGCTGA-TGAATGCCA-GAGTTGTGT 529 Query 490 ATCTCGGAGAAGCAGAACAAGTGCCTA-CAAGAGACGACAAGGTTCTCGAGCTCGAAATC 548 | ||||| || || || ||||| |||| ||| ||||||||| | || || ||||||||| Sbjct 530 ACCTCGGCGAGGCGGAGCAAGTTCCTACCAA-AGACGACAAAGAGCTTGAACTCGAAATC 588 Query 549 GTGAGGAATTTGAGGAAGCGATGTATTGAGAGCGATCGTCAGTTATCTTTAGCATTGGAA 608 || || || |||||||| |||| |||||| ||| ||||| | ||| ||||| | ||| Sbjct 589 GTTAGAAACCTGAGGAAGAGATGCGTTGAGAACGAGCGTCAAATCTCTGTAGCACTAGAA 648 Query 609 GCATTTCCTCTTGATTTGCAGGAACAG-TTAAACCAATACATGGACAAGAGGATGGATGG 667 ||||| ||||||||||||||||| ||| || || ||||||||||| | ||||||||| || Sbjct 649 GCATTCCCTCTTGATTTGCAGGACCAGCTT-AATCAATACATGGATAGGAGGATGGACGG 707 Query 668 AGAGGTATTGAAGTCGTATGT-ATCACATTGGCCAGTC-CAACGTTGGCAAGAGTATGAG 725 |||| ||||||||| ||||| | |||||||||| | | |||||||||||||| |||||| Sbjct 708 AGAGACATTGAAGTCTTATGTGA-CACATTGGCCTG-CTCAACGTTGGCAAGAATATGAG 765 Query 726 CCTCTCTTAAGTTACTGCCGCGATAACGGAGTTAAACTCATTGCTTGTGGCACTCCGCTC 785 ||||| ||||||||||| ||||||||| |||| ||| ||||||||||||||||| ||| Sbjct 766 CCTCTTTTAAGTTACTGTCGCGATAACTCTGTTAGACTAATTGCTTGTGGCACTCCTCTC 825 Query 786 AAGGTTTTAAGAACTGTCCAAGCTGAGGGTATCCGTGGTCTATCAGAGTCTGAGCGTAAA 845 ||||||||||||||||||||||| || |||||||||||||| ||| | |||||||||||| Sbjct 826 AAGGTTTTAAGAACTGTCCAAGCAGAAGGTATCCGTGGTCTTTCAAAATCTGAGCGTAAA 885 Query 846 TTATACACTCCTCCTGCGGGTTCAGGGTTTATCTCAGGGTTTACTTCCTTCTCACGTAGT 905 ||||||||||| ||||| ||||| |||||||| ||||| ||| |||||||||||||||| Sbjct 886 TTATACACTCCCCCTGCTGGTTCTGGGTTTATTTCAGGATTTTCTTCCTTCTCACGTAGA 945 Query 906 TCTTCACTCAATATGAATCCACTC-ACACAGATTGTTCCATTTGGACCGAGTTCTTATTT 964 ||| || | |||||| | | | | |||||||||||||| |||||||| ||||||||||| Sbjct 946 TCTACATTTGATATGAGT-CTCCCAACACAGATTGTTCCGTTTGGACCAAGTTCTTATTT 1004 Query 965 GTCGGCACAAGCTAGAGTTGTTGAAGACCATACAATGTCTCAAGTTATTGTACAAGCAGT 1024 ||||||||| || |||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 1005 GTCGGCACAGGCAAGAGTTGTTGAAGACCATACAATGTCACAAGTTATTTTACAAGCAGT 1064 Query 1025 TGCAGATGGAGGTGGAACTGGTATGCTGGTAGTGGTGACAGGGGCAAACCATGTTGAGTA 1084 ||||||||||| || | |||| | ||| ||||||| |||||||| | ||||||||||| Sbjct 1065 AGCAGATGGAGGGGGTAGTGGTCTACTGTTAGTGGTAACAGGGGCGAGTCATGTTGAGTA 1124 Query 1085 TGGGTCAAGGGGAACAGGATTGCCGGCAAGGATCTCTAGGAAGATTCCGAAGAAAAGTCA 1144 ||| ||||| |||||||| ||||| ||||||||||| |||||| |||| ||||||| || Sbjct 1125 TGGCTCAAGAGGAACAGGTTTGCCAGCAAGGATCTCAAGGAAGTTTCCAAAGAAAAACCA 1184 Query 1145 ACTTGTTGTGTTACTTGATCCTGAAAGACAGTTTTTGCGGAA-AGAGGGTGAATCTCCAG 1203 ||||||||| |||||||||||||||||||||| |||| ||| |||||| ||| |||||| Sbjct 1185 ACTTGTTGTATTACTTGATCCTGAAAGACAGTACTTGC-GAAGAGAGGGCGAAACTCCAG 1243 Query 1204 TTGCTGATTTCTTGTGGTATTCTGCGGCCAGACCCTGCAGCAGAAACTGCTTTGACCGAG 1263 ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct 1244 TTGCTGATTTCTTGTGGTATTCTGCAGCAAGACCCTGCAGTAGAAACTGCTTTGACCGAG 1303 Query 1264 CAGAAATCGCTCGGGTAATGAATGCGGCTGGTAGGAGACGAGATGCCCTTCC-CCAAGAC 1322 |||| || ||||| ||||||||||| ||||| ||||| |||||||||||||| || || Sbjct 1304 CAGAGATTGCTCGAGTAATGAATGCAGCTGGCAGGAGGCGAGATGCCCTTCCACC-GGAT 1362 Query 1323 ATTCAAAAAGGATTAGACCTTGGTCTGGTGTCACCTGAGATTCTGCAGAATTTCTTTGAT 1382 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 1363 ATTCAAAATGGATTAGACCTTGGTCTGGTGTCACCTGAGGTTCTGCAGAATCTCTTTGAT 1422 Query 1383 TTGGAGCAATATCCTCTTATTTCAGAGCTTACACAACGGTTCCAGGGATTCCGAGAAAGG 1442 |||||||| |||||||||||||| |||||||| || ||||| ||||| |||||||||||| Sbjct 1423 TTGGAGCAGTATCCTCTTATTTCTGAGCTTACTCAGCGGTTTCAGGGTTTCCGAGAAAGG 1482 Query 1443 TTGTTGGCAGATCCCAAATTCTTGAATAGATTAGCTATTGAAGAAGCTATATCAATAACA 1502 |||||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||| Sbjct 1483 TTGTTGGCAGATCCAAAATTCCTGAATAGATTAGCTATCGAAGAGGCTATATCAATAACA 1542 Query 1503 ACAACACTT-GTAGCTCAATATGAGAAGCGGAAAGAAAATTTCTTTGAAGAACTCGACTA 1561 || ||| || |||| |||||||||||||||| ||| ||||||||||||||| ||||||| Sbjct 1543 ACTACA-TTAATAGCACAATATGAGAAGCGGAGAGAGAATTTCTTTGAAGAAATCGACTA 1601 Query 1562 TGTGATCACTGATAGC-GTAAGAGCATCAGTTGTTGATTTTTTCACAGTTTGGCTCCCTG 1620 ||| || ||||||| | || |||| |||||| ||||||||||||||||||||||| |||| Sbjct 1602 TGTTATAACTGATA-CAGTGAGAGGATCAGTCGTTGATTTTTTCACAGTTTGGCTTCCTG 1660 Query 1621 CACCAACCTTGTCTTTTATCTCATATGCTGATGAGACAATTGGGCCAAACAGCATAGATG 1680 ||||||| ||||||||| | ||||||||||||||||| | ||| ||| |||||||||| | Sbjct 1661 CACCAACTTTGTCTTTTCTTTCATATGCTGATGAGACCACTGGACCAGACAGCATAGACG 1720 Query 1681 CCTTAAGAGGCCTCCTAGGGTCCATACCTGACAATGCATTTCAAAAAAGTCTAGGTGGAC 1740 || | |||||||||||||| ||||||||||| || ||||||||||||||||| | |||| Sbjct 1721 CCCTGAGAGGCCTCCTAGGATCCATACCTGATAACGCATTTCAAAAAAGTCTTGCTGGA- 1779 Query 1741 A-AGAGTGG-ACTCTGAGTCTTAGGATTGCTTCAGTTATTATCGGTGGCTTGAAGCTTGC 1798 | ||||||| || |||| |||||| ||||||||||||||| | ||||||||||||||||| Sbjct 1780 AGAGAGTGGAAC-CTGAATCTTAGAATTGCTTCAGTTATTGTTGGTGGCTTGAAGCTTGC 1838 Query 1799 TGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGATCTTCAAATGCTTTGTATGCAAT 1858 ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| | | Sbjct 1839 TGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGAGCTTCAAATGCATTGAATGTAGT 1898 Query 1859 ACGAAAATTCATTAAACCAGAGTTGGGTGTTGGTGAGCAAGCAAAGAGGTCTCCTATGCT 1918 |||||| |||||| ||| ||||||| |||| |||| || | |||||||||||| | || Sbjct 1899 ACGAAAGGTCATTAGACCCGAGTTGGTTGTTTCTGAGAAACCTAAGAGGTCTCCTCTTCT 1958 Query 1919 GAAGACGGCCCTTGTGTATGGAGGTTATCTGGGAACATCTTCGAATATCCGTTATCAGAT 1978 ||||||||| | || |||||||||| ||||||||||||| | ||| | ||||| ||||| Sbjct 1959 GAAGACGGCAATGGTTTATGGAGGTTTTCTGGGAACATCTGCAAATCTTCGTTACCAGAT 2018 Query 1979 AATTGCTGGG-TTAATAGAGCATCGCATTTCTGACGAGCTTTCTTCTCAACCTCTACTTG 2037 |||||| ||| ||||||||||||||| ||||||| |||||||| |||||||||||||||| Sbjct 2019 AATTGC-GGGATTAATAGAGCATCGCCTTTCTGATGAGCTTTCCTCTCAACCTCTACTTG 2077 Query 2038 TAAA--CATGATTTCATTTGTTGTTCGAGTAGC-TAA-CTCCTACTTTGGAACTCAGCAA 2093 |||| | | |||||||||||||| | || | | ||| ||| || |||||||| |||||| Sbjct 2078 TAAATGC-T-ATTTCATTTGTTGT-C-AGGACCCTAAACTCATATTTTGGAACGCAGCAA 2133 Query 2094 TGGATTGATCTTGCGCGCTCTACGGGTCTGCAAACTCAGAAAAGTGTCACAACTTCCAAC 2153 ||||| |||||||| |||||||| |||||||||||||||||||| || || | || || Sbjct 2134 TGGATCGATCTTGCACGCTCTACAGGTCTGCAAACTCAGAAAAGCATCCCAGCCTCTAAA 2193 Query 2154 CAAATCCCCGAGG-TT-GCGA-GCCAATCCACAGTGGAATAC-AGTAC-A--ACTGAAGA 2206 |||| || |||| || | || | |||| || ||||||| | | ||| | |||||||| Sbjct 2194 GAAATTCCAGAGGCTTTG-GAAG--AATCGACGGTGGAATGCGA-TACTACTACTGAAGA 2249 Query 2207 GGCAAGTATGGATGATCTTAAGAATCAATGA 2237 || |||||| || | || || ||||||||| Sbjct 2250 GGAAAGTATCGACAAGCTCAATAATCAATGA 2280 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91378497755 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5