BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G41560.1 Length=3355 Score E Sequences producing significant alignments: (Bits) Value Ahg483236 jgi|Araly1|483236|fgenesh2_kg.4__2296__AT2G41560.1 5236 0.0 Ahg486176 jgi|Araly1|486176|fgenesh2_kg.5__2168__AT3G57330.1 3142 0.0 Ahg899595 jgi|Araly1|899595|Al_scaffold_0004_245 283 5e-75 > Ahg483236 jgi|Araly1|483236|fgenesh2_kg.4__2296__AT2G41560.1 Length=3201 Score = 5236 bits (2835), Expect = 0.0 Identities = 3086/3208 (96%), Gaps = 14/3208 (0%) Strand=Plus/Plus Query 15 ctctctctctcAGCTGCCTTCGCGCCGGCGAAG-TT-TGTCTCTGTGAAAACAGAGAGTG 72 ||||||||||||||||||||||||||||||||| || | ||||| ||||||||||||||| Sbjct 1 CTCTCTCTCTCAGCTGCCTTCGCGCCGGCGAAGTTTATCTCTCTTTGAAAACAGAGAGTG 60 Query 73 -GTAGTGAGAGCGTGAGAAATGTCGAACTTGCTAAGGGATTTCGAGGTGGAGGCTAAGAA 131 | ||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct 61 AG-AGTGAGA--GTGAGAAATGTCGAATTTGCTAAGGGACTTCGAGGTCGAGGCTAAGAA 117 Query 132 TCCGTCGCTGGAAGCGCGTCAAAGATGGAGGTCGTCCGTGTCTATCGTGAAGAACCGTAC 191 |||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||| Sbjct 118 TCCGTCGCTGGAAGCGCGTCAACGATGGAGGTCGTCCGTCTCTATAGTGAAGAACCGTAC 177 Query 192 TCGTCGTTTCCGTAACATTCGGGATCTCGATAAGCTCGCTGACTACGAGAACAAGAAGCA 251 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 178 TCGTCGTTTCCGTAACATTCGGGATCTCGATAAGCTCGCTGACTACGAGACCAAGAAGCA 237 Query 252 CCAGATCCAGGAAAAGATCCGAGTTGCTTTCTTTGTTCAAAAGGCAGCTCTTCATTTCAT 311 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 238 CCAGATCCAGGAAAAGATCCGAGTTGCTTTCTATGTTCAAAAGGCAGCTCTTCAATTCAT 297 Query 312 TGATGCTGCTGCTAGGCCGGAATACAAGCTCACTGATGAGGTTAAGAAAGCCGGATTTTC 371 |||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| Sbjct 298 TGATGCTGCTGCTAGGCCGGAATACAAGCTCAGTGATGAGGTTAAGCAAGCTGGATTTTC 357 Query 372 TATTGAAGCAGATGAACTTGCATCTATGGTTCGCAAAAATGACACTAAGAGCCTGGCACA 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 TATTGAAGCAGATGAACTTGCATCTATGGTTCGCAAAAATGACACTAAGAGCCTGGCACA 417 Query 432 GAAAGGTGGAGTTGAAGAACTTGCTAA-AAAAGTATCTGTATCTCTCTCTGAAGGCA-TT 489 |||||||||||||||||| ||||||| |||| ||||||||||||| |||||| | || Sbjct 418 CAAAGGTGGAGTTGAAGAAATTGCTAAGAAAA-TATCTGTATCTCTAGATGAAGG-AGTT 475 Query 490 CGTTCGAGTGAAGTGCCCATTAGGGAAAAGATATTTGGAGAAAATCGTTATACTGAGAAA 549 ||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| Sbjct 476 CGTTCGAGTGAAGTGCCCACCAGGGCAAAGATATTTGGAGAAAATCGTTACACTGAGAAA 535 Query 550 CCAGCCAGATCATTCTTAATGTTTGTGTGGGAAGCGCTCCACGACATAACCCTTATCATT 609 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 536 CCAGCCAGATCATTTTTAATGTTTGTGTGGGAAGCGCTCCACGACATAACCCTTATCATC 595 Query 610 CTTATGGTCTGCGCTGTAGTATCAATAGGTGTGGGTGTTGCTACAGAAGGATTTCCAAGG 669 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 596 CTTATGGTCTGCGCTGTAGTATCAATAGGTGTGGGTGTTGCCACAGAAGGATTTCCAAAG 655 Query 670 GGAATGTATGATGGGACAGGGATCTTGCTAAGTATACTCTTGGTGGTCATGGTTACTGCG 729 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 656 GGAATGTATGATGGAACAGGGATCTTGCTAAGTATACTCTTGGTAGTCATGGTTACTGCG 715 Query 730 ATCAGTGATTACAAGCAATCTTTGCAGTTCAGAGACTTGGATCGAGAGAAGAAGAAGATT 789 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 716 ATCAGTGACTACAAGCAATCTTTGCAGTTCAGAGACTTGGATCGAGAGAAGAAGAAGATT 775 Query 790 ATTGTCCAGGTCACCAGAGATGGGAGCAGACAAGAAATCTCCATTCATGACTTGGTCGTT 849 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 776 ATTGTCCAGGTCACCAGAGATGGGAACAGACAAGAAATCTCCATTCATGACTTGGTCGTT 835 Query 850 GGAGATGTAGTTCATCTATCTATTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCT 909 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 836 GGAGATGTAGTTCATCTATCTATTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCT 895 Query 910 GGATACAACTTGGAGATAGACGAGTCAAGCTTATCGGGTGAGAGTGAACCGTCACATGTG 969 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 896 GGATACAACTTGGAGATAGATGAGTCAAGCTTATCGGGCGAGAGTGAACCGTCACATGTG 955 Query 970 AATAAAGAGAAGCCTTTTCTGCTTTCAGGAACCAAAGTACAAAACGGTTCTGCAAAAATG 1029 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 956 AATAAAGAGAAGCCTTTTCTGCTTTCAGGAACCAAAGTACAAAACGGTTCTGCAAAAATG 1015 Query 1030 CTGGTGACAACAGTTGGTATGAGGACTGAGTGGGGAAAGTTGATGGAAACGCTGGTTGAT 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1016 CTGGTGACAACAGTTGGTATGAGGACTGAGTGGGGAAAGTTGATGGAAACGCTGGTTGAT 1075 Query 1090 GGTGGAGAAGATGAGACGCCTCTGCAGGTGAAGCTAAATGGGGTTGCAACAATCATTGGT 1149 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 1076 GGTGGAGAAGATGAGACTCCTCTGCAGGTGAAGCTAAATGGGGTTGCAACAATAATTGGT 1135 Query 1150 AAGATTGGTTTAAGCTTTGCTGTGCTTACATTTGTGGTATTGTGCATAAGGTTTGTCTTG 1209 ||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 1136 AAGATTGGTTTAACCTTCGCCGTGCTTACATTTGTGGTATTGTGCATAAGGTTTGTCTTG 1195 Query 1210 GACAAAGCAACGTCTGGTAGCTTCACCAACTGGTCATCTGAAGATGCATTGACGCTACTT 1269 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1196 GAGAAAGCAACGTCTGGTAGCTTCACCAACTGGTCATCTGAAGATGCACTGACGCTACTT 1255 Query 1270 GACTACTTTGCAATTTCTGTAACTATCATTGTCGTTGCCGTGCCCGAAGGTTTGCCACTG 1329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1256 GACTACTTTGCAATTTCTGTAACTATCATTGTCGTTGCCGTGCCCGAAGGTTTGCCACTG 1315 Query 1330 GCAGTGACCTTAAGTTTGGCATTTGCTATGAAGAAGCTGATGAGTGACAGGGCACTTGTG 1389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 GCAGTGACCTTAAGTTTGGCATTTGCTATGAAGAAGCTGATGAGTGACAGGGCACTTGTG 1375 Query 1390 AGGCATCTTGCTGCATGTGAGACTATGGGTTCTTCTACTTGCATCTGCACTGATAAGACA 1449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1376 AGGCATCTTGCTGCATGTGAGACTATGGGTTCTTCTACTTGCATCTGCACTGATAAGACA 1435 Query 1450 GGGACCTTAACTACTAATCACATGGTGGTCAACAAAGTATGGATCTGTGATAAGGTTCAA 1509 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1436 GGGACCTTGACTACTAATCACATGGTGGTCAACAAAGTATGGATCTGTGATAAGGTTCAA 1495 Query 1510 GAGAGGCAAGAGGGAAGTAAAGAAAGCTTTGAGTTGGAACTATCGGAAGAAGTTCAGAGC 1569 ||||||||||||||||||| ||| |||||| ||||||||||| | |||||||||||||| Sbjct 1496 GAGAGGCAAGAGGGAAGTACAGAGAGCTTTCAGTTGGAACTACCAGAAGAAGTTCAGAGT 1555 Query 1570 ACTCTTTTGCAGGGTATATTTCAGAACACTGGTTCGGAAGTTGTTAAGGATAAAGATGGA 1629 | |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| Sbjct 1556 ATTCTTTTGCAGGGCATATTTCAGAACACTGGTTCTGAAGTTGTTAGGGATAAAGATGGA 1615 Query 1630 AACACTCAGATCCTAGGATCCCCGACAGAAAGAGCAATACTCGAATTCGGTTTACTTTTA 1689 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1616 AACACTCAGATCCTAGGATCCCCGACAGAAAGAGCAATACTCGAATTCGGTTTGGTTTTA 1675 Query 1690 GGTGGTGATTTTAACACGCAGCGTAAAGAGCATAAGATACTCAAGATTGAGCCGTTCAAT 1749 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1676 GGTGGTGATTTTAACACGCAGCGTAAAGAGCATAAGATACTCAAGATTGAGCCGTTCAAT 1735 Query 1750 TCAGACAAGAAGAAAATGTCTGTTCTTATAGCTCTTCCTGGAGGTGGTGCACGGGCTTTC 1809 |||||||||||||||||||||||||| ||| |||| ||||||||||| |||||||||||| Sbjct 1736 TCAGACAAGAAGAAAATGTCTGTTCTCATAACTCTCCCTGGAGGTGGCGCACGGGCTTTC 1795 Query 1810 TGCAAAGGGGCATCTGAAATAGTGTTGAAAATGTGTGAGAATGTTGTGGATTCAAACGGA 1869 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 1796 TGCAAAGGGGCATCTGAAATAGTGTTGAAAATGTGCGAGAATGTTGTGGATTCAAATGGA 1855 Query 1870 GAATCGGTTCCGCTAACTGAAGAACGGATTACGAGTATCTCTGATATCATAGAGGGTTTT 1929 ||||| ||||| |||||||||||||| ||||| |||||||||||| |||||||||||||| Sbjct 1856 GAATCTGTTCCACTAACTGAAGAACGAATTACAAGTATCTCTGATGTCATAGAGGGTTTT 1915 Query 1930 GCCTCAGAGGCTCTGAGGACTCTCTGCTTGGTTTACAAAGATCTAGATGAAGCTCCCAGT 1989 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1916 GCCTCAGAGGCTTTGAGGACTCTCTGCTTGGTTTACAAAGATCTGGATGAAGCTCCCAGT 1975 Query 1990 GGAGAGCTCCCTGATGGAGGCTATACAATGGTAGCAGTTGTTGGAATCAAGGATCCAGTA 2049 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1976 GGAGATCTCCCTGATGGAGGCTATACAATGATAGCAGTTGTTGGAATCAAGGATCCAGTA 2035 Query 2050 CGTCCGGGTGTTAGGGAAGCCGTTCAGACTTGTCAAGCTGCCGGAATCACCGTCCGTATG 2109 || ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct 2036 CGGCCGGGTGTTAGGGAAGCTGTCCAGACTTGTCAAGCTGCTGGAATCACCGTCCGTATG 2095 Query 2110 GTCACTGGAGATAACATAAGCACAGCCAAAGCAATTGCTAAGGAATGTGGCATATATACC 2169 |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 2096 GTCACTGGAGATAACATAAGCACAGCAAAAGCAATTGCAAAGGAATGTGGTATATATACT 2155 Query 2170 GAAGGAGGCTTAGCTATAGAAGGTTCAGAATTCCGGGACTTGTCTCCTCACGAAATGAGG 2229 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 2156 GAAGGAGGTTTAGCTATCGAAGGTTCAGAATTCCGGGACTTATCTCCTCACGAAATGAGG 2215 Query 2230 GCCATTATCCCCAAAATTCAGGTAATGGCTCGGTCTCTGCCATTGGACAAACATACTTTA 2289 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 2216 GCCATTATCCCCAAAATTCAGGTAATGGCTCGGTCTCTGCCCTTGGATAAACATACTTTA 2275 Query 2290 GTCAGCAACTTGAGGAAAATTGGAGAGGTAGTTGCAGTGACAGGGGATGGGACAAACGAT 2349 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 2276 GTCAGCAACTTGAGGAAAATTGGAGAGGTAGTTGCAGTGACTGGGGATGGGACAAATGAT 2335 Query 2350 GCCCCTGCGTTGCATGAGGCAGACATTGGACTAGCAATGGGAATAGCTGGAACAGAGGTT 2409 |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 2336 GCCCCTGCCTTGCATGAGGCAGACATTGGACTTGCAATGGGAATAGCTGGGACAGAGGTT 2395 Query 2410 GCGAAAGAGAATGCTGATGTGATCATAATGGACGATAACTTCAAAACAATAGTAAATGTG 2469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2396 GCGAAAGAGAATGCTGATGTGATCATAATGGACGATAACTTCAAAACAATAGTAAATGTG 2455 Query 2470 GCTAGATGGGGACGTGCTGTATATATAAACATTCAGAAGTTTGTTCAGTTCCAGCTAACT 2529 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2456 GCTAGATGGGGACGTGCTGTGTATATAAACATTCAGAAGTTTGTTCAGTTCCAGCTAACT 2515 Query 2530 GTTAATGTGGTTGCTCTGATCATCAACTTTGTCTCTGCTTGCATCACAGGATCTGCTCCA 2589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2516 GTTAATGTGGTTGCTCTGATCATCAACTTTGTCTCTGCTTGCATCACAGGATCTGCTCCA 2575 Query 2590 CTCACTGCTGTGCAACTGCTTTGGGTCAACATGATCATGGACACACTTGGTGCATTGGCT 2649 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2576 CTCACTGCTGTGCAACTTCTTTGGGTCAACATGATCATGGACACACTTGGTGCATTGGCT 2635 Query 2650 CTAGCAACAGAACCTCCCAATGAAGGTTTAATGAAACGTGCACCAATAGCTAGAACCGCC 2709 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 2636 CTAGCAACAGAACCTCCCAATGAAGGTTTAATGAAACGTGCACCAATCGTTAGAACCGCC 2695 Query 2710 AGCTTTATCACCAAAACCATGTGGAGAAACATCGCTGGTCAAAGCGTTTACCAGTTGATT 2769 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2696 AGCTTCATCACCAAAACCATGTGGAGAAACATCGCCGGTCAAAGCGTTTACCAGTTGATT 2755 Query 2770 GTCTTAGGAATTCTCAATTTCGCAGGCAAATCACTTCTCAAACTAGATGGCCCTGACTCC 2829 ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 2756 GTCTTGGGAATTCTCAATTTTGCAGGCAAATCACTTCTCAAACTCGATGGCCCTGACTCC 2815 Query 2830 ACAGCCGTTCTTAACACAGTCATCTTCAACTCCTTCGTCTTTTGCCAGGTGTTCAATGAG 2889 ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 2816 ACAGCTGTTCTTAACACGGTCATCTTCAACTCCTTCGTCTTTTGCCAGGTATTCAATGAG 2875 Query 2890 ATCAATAGCCGGGAAATAGAGAAGATAAATGTGTTCAAAGGAATGTTCAATAGCTGGGTG 2949 ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2876 ATCAATAGCCGTGAAATAGAGAAGATAAATGTGTTCACAGGAATGTTCAATAGCTGGGTC 2935 Query 2950 TTCACTTGGGTAATGACTGTGACGGTAGTGTTTCAAGTGATCATAGTGGAGTTTCTTGGA 3009 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2936 TTCACATGGGTAATGACTGTGACCGTAGTGTTTCAAGTGATCATAGTGGAGTTTCTTGGA 2995 Query 3010 GCATTTGCTAGCACCGTTCCTCTGAGCTGGCAACATTGGTTACTATCAATCTTGATAGGA 3069 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2996 GCATTTGCTAGCACCGTTCCTTTGAGCTGGCAACATTGGTTACTATCAATCTTGATAGGA 3055 Query 3070 TCATTGAACATGATTGTAGCCGTTATCCTCAAATGCGTACCTGTCGAGTCT-CGTCACCA 3128 ||||||| |||||||||||||||||||||||||||| |||| ||||||||| | |||||| Sbjct 3056 TCATTGAGCATGATTGTAGCCGTTATCCTCAAATGCATACCCGTCGAGTCTTC-TCACCA 3114 Query 3129 TCACGATGGCTACGACCTGCTTCCTTCTGGTCCTTCTTCTTCCAACTCTGCCTGATACCG 3188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3115 TCACGATGGCTACGACCTGCTTCCTTCTGGTCCTTCTTCTTCCAACTCTGCCTGATACCG 3174 Query 3189 TTTCTATGTTCA-CtttttttttGTTTT 3215 || ||||||||| |||||||||| |||| Sbjct 3175 TTACTATGTTCATCTTTTTTTTT-TTTT 3201 > Ahg486176 jgi|Araly1|486176|fgenesh2_kg.5__2168__AT3G57330.1 Length=3263 Score = 3142 bits (1701), Expect = 0.0 Identities = 2644/3096 (85%), Gaps = 78/3096 (3%) Strand=Plus/Plus Query 104 TAAGGGATTTCGAGGTGGAGGCTAAGAATCCGTCGCTGGAAGCGCGTCAAAGATGGAGGT 163 ||| |||||||||||| || ||||||||||||||||| ||||| |||||| ||||| ||| Sbjct 15 TAA-GGATTTCGAGGTCGAAGCTAAGAATCCGTCGCTCGAAGCTCGTCAACGATGGCGGT 73 Query 164 CGTCCGTGTC-TA-TCGTGAAGAACCGTACTCGTCGTTTCCGTAACATTC-GGGATCTCG 220 | ||| ||| | |||| || || || ||||||| ||||||| | || | |||||| Sbjct 74 CCTCC--GTCGGACTCGTCAAAAATCGGGCTCGTCGATTCCGTATGA-TCAGCAATCTCG 130 Query 221 ATAAGCTCGCTGACTACGAGAACAAGAAGCA--CCAGATCCAGGAAAAGATCCGAGTTGC 278 | || |||||||| | || || ||| || | | |||||||||||||||| || ||||| Sbjct 131 AGAAACTCGCTGAGAATGACAAGAAG-AG-ATGCGAGATCCAGGAAAAGATACGGGTTGC 188 Query 279 TTTCTTTGTTCAAAAGGCAGCTCTTCATTTCATTGATGCT-GCTGCTAGGCCG-GAATAC 336 ||||| ||||||||||||||||||||| |||||||||||| || || | || ||||| Sbjct 189 TTTCTATGTTCAAAAGGCAGCTCTTCAGTTCATTGATGCTGGC-GC-CCGTCGTGAATAT 246 Query 337 AAGCTCACTGATGAGGTTAAGA-AAGCCGGATTTTCTATTGAAGCAGATGAACTTGCATC 395 || |||||||||||||| || | |||| ||||||| | | ||||||||||| ||||| || Sbjct 247 AAACTCACTGATGAGGTCAA-ACAAGCAGGATTTTATGTCGAAGCAGATGAGCTTGCTTC 305 Query 396 TATGGTTCGCAAAAATGACACTAAGAGCC-TGGCACAGAAAGGTGGAGTTGAA-GAACTT 453 |||||||||||| ||||||| ||||||| | || ||| || ||| |||| ||| || Sbjct 306 TATGGTTCGCAATCATGACACAAAGAGCCTTACCA-AGAGCGGAGGACCTGAAGGAA-TT 363 Query 454 GCTAAAAAAGTATCTGTATCTCTCTCTGAAGGCATTCGTTCGAGTGAAGTGCCCATTAGG 513 ||| | ||||| |||||||||||| ||||||| | |||||||||||| | | ||| || Sbjct 364 GCTCAGAAAGTGTCTGTATCTCTCGCTGAAGGTGTCCGTTCGAGTGAACTACACATCAGA 423 Query 514 GA-AAAGATATTTGGAGAAAATCGTTATACTGAGAAACCAGCCAGATCATTCTTAATGTT 572 || ||| || | ||||||||| |||||| |||||||||| |||||||| || |||| ||| Sbjct 424 GAGAAA-ATCTATGGAGAAAACCGTTATCCTGAGAAACCTGCCAGATCGTTTTTAACGTT 482 Query 573 TGTGTGGGAAGCGCTCCACGACATAACCCTTATCATTCTTATGGTCTGCGCTGTAGTATC 632 ||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| Sbjct 483 TGTTTGGGAAGCGCTTCAAGACATAACCCTTATCATCCTTATGGTCTGCGCTGTAGTATC 542 Query 633 AATAGGTGTGGGTGTTGCTACAGAAGGATTTCCAAGGGGAATGTATGATGGGACAGGGAT 692 ||||| ||||| ||||| |||||||||||||||| ||| |||||||||||||| ||||| Sbjct 543 GATAGGAGTGGGAGTTGCCACAGAAGGATTTCCAAAGGGCATGTATGATGGGACGGGGAT 602 Query 693 CTTGCTAAGTATACTCTTGGTGGTCATGGTTACTGCGATCAGTGATTACAAGCAATCTTT 752 |||||| |||||| |||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct 603 CTTGCTTAGTATAATCTTGGTGGTTATGGTTACTGCTATCAGTGACTACAAGCAATCTTT 662 Query 753 GCAGTTCAGAGACTTGGATCGAGAGAAGAAGAAGATTATTGTCCAGGTCACCAGAGATGG 812 |||||||||||| |||||||||||||| |||||||||||| | || |||||||| ||||| Sbjct 663 GCAGTTCAGAGATTTGGATCGAGAGAAAAAGAAGATTATTATTCAAGTCACCAGGGATGG 722 Query 813 GAGCAGACAAGAAATCTCCATTCATGACTTGGTCGTTGGAGATGTAGTTCATCTATCTAT 872 |||||||||||| |||||||| ||||||||||| ||||||||||| |||||| ||||||| Sbjct 723 GAGCAGACAAGAGATCTCCATCCATGACTTGGTTGTTGGAGATGTGGTTCATTTATCTAT 782 Query 873 TGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCTGGATACAACT-TGGAGATAGACG 931 |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| Sbjct 783 TGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCCGGATACAA-TCTGGAGATAGACG 841 Query 932 AGTCAAGCTTATCGGGTGAGAGTGAACCGTCACATGTGAATAAAGAGAAGCCTTTTCTGC 991 | |||||||||||||| ||||||||||| |||||||||||||||||||| || ||||||| Sbjct 842 AATCAAGCTTATCGGGCGAGAGTGAACCATCACATGTGAATAAAGAGAACCCGTTTCTGC 901 Query 992 TTTCAGGAACCAAAGTACAAAACGGTTCTGCAAAAATGCTGGTGACAACAGTTGGTATGA 1051 |||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||| Sbjct 902 TTTCAGGAACCAAAGTCCAAAACGGCTCTGCAAAAATGCTGGTTACAACCGTTGGTATGA 961 Query 1052 GGACTGAGTGGGGAAAGTTGATGGAAACGCTGGT-TGATGGTGGAGAAGATGAGACGCCT 1110 ||||||||||||||||||||||||| || || || ||| |||||||| |||||||| ||| Sbjct 962 GGACTGAGTGGGGAAAGTTGATGGATACTCT-GTGTGAGGGTGGAGAGGATGAGACCCCT 1020 Query 1111 CTGCAGGTGAAGCTAAATGGGGTTGCAACAATCATTGGTAAGATTGGTTTAAG-CTTTGC 1169 ||||||||||| ||||| || |||||||||||||| |||||||||||||| || ||||| Sbjct 1021 CTGCAGGTGAAACTAAACGGTGTTGCAACAATCATAGGTAAGATTGGTTT-AGTATTTGC 1079 Query 1170 TGTG-CTTACATTTGTGGTATTGTGCATAAGGTTTGTCT-TGGACAAAGCAACGTCTGGT 1227 ||| | ||| ||| |||| |||||||||||||| || | |||| ||||| ||| ||||| Sbjct 1080 AGTGAC-TACGTTTTTGGTGTTGTGCATAAGGTTCGT-TGTGGAGAAAGCCACGGCTGGT 1137 Query 1228 AGCTTCACCAACTGGTCATCTGAAGATGCATTGACGCTACTTGACTACTTTGCAATTTCT 1287 ||| |||| | ||||| |||||||||||| | || | |||||||||||||||||| || Sbjct 1138 AGCATCACTGAGTGGTCTTCTGAAGATGCACTAACATTTCTTGACTACTTTGCAATTGCT 1197 Query 1288 GTAACTATCATTGTCGTTGCCGTGCCCGAAGGTTTGCCACTGGCAGTGACCTTAAGTTTG 1347 || || || || || ||||| || || ||||| || || |||| |||||||| ||| | Sbjct 1198 GTTACCATTATAGTTGTTGCTGTACCTGAAGGATTACCTTTGGCTGTGACCTTGAGTCTA 1257 Query 1348 GCATTTGCTATGAAGAAGCTGATGAGTGACAGGGCACTTGTGAGGCATCTT-GCTGCATG 1406 |||||||||||||||||| | ||||||||||||||||||||||||||| || |||||||| Sbjct 1258 GCATTTGCTATGAAGAAGTTAATGAGTGACAGGGCACTTGTGAGGCAT-TTGGCTGCATG 1316 Query 1407 TGAGACTATGGGTTCTTCTACTTGCATCTGCACTGATAAGACAGGGACCTTAACTACTAA 1466 |||||| |||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| Sbjct 1317 TGAGACGATGGGTTCTTCTACCTGCATCTGCACGGATAAAACAGGGACCTTAACCACTAA 1376 Query 1467 TCACATGGTGGTCAACAAAGTATGGATCTGTGATAAGGTTCAAGAGAGGCAAGAGGGAAG 1526 |||||||| ||||||||||| ||||| ||||| || | | | ||| ||||| ||| Sbjct 1377 CCACATGGTAGTCAACAAAGTTTGGATATGTGA-AA--AT-ATCA-AGG--AGAGGCAAG 1429 Query 1527 TAAAGAAAGCTTTGAGTTGGAA-CTATCGGAAGAAGTTCAGAGCACT-CTTTTGCAGGGT 1584 |||||| ||| |||| ||| ||||| ||| |||| ||| | | ||| | |||| Sbjct 1430 --AAGAAAACTTCCAGTT-GAACCTATCTGAACTAGTTAAGAATA-TCCTTATACAGGCC 1485 Query 1585 ATATTTCAGAACACTGGTTCGGAAGTTGTTAAGGATAAAGATGGAAACACTCAGATCCTA 1644 |||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| Sbjct 1486 ATATTTCAGAACACTGGTTCTGAAGTCGTTAAGGATAAGGAAGGAAAAACTCAGATCCTG 1545 Query 1645 GGATCCCCGACAGAAAGAGCAATACTCGAATTCGGTTTACTTTTAGGTGGTGATTTTAAC 1704 || || || |||||||| || ||||| ||||| ||||| |||||||||||||| || || Sbjct 1546 GGTTCACCTACAGAAAGGGCTATACTGGAATTTGGTTTGCTTTTAGGTGGTGACGTTGAC 1605 Query 1705 ACGCAGCGTAAAGAGCATAAGATACTCAAGATTGAGCCGTTCAATTCAGACAAGAAGAAA 1764 || || || ||| ||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct 1606 ACACAACGCCGAGAACATAAGATACTCAAGATAGAGCCATTCAACTCAGACAAGAAGAAA 1665 Query 1765 ATGTCTGTTCTTATAGCTC-TTCCTGGAGGTGGTGCACGGGCTTTCTGCAAAGGGGCATC 1823 ||||||||||||| | ||| || |||| ||| | ||| |||||||||||||| ||||| Sbjct 1666 ATGTCTGTTCTTACATCTCATT-CTGGTGGTAAAGTACGTGCTTTCTGCAAAGGTGCATC 1724 Query 1824 TGAAATAGTGTTGAAAATGTGTGAGAATGTTGTGGATTCAAACGGAGAATCGGTTCCGCT 1883 ||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| | Sbjct 1725 TGAAATAGTCTTGAAAATGTGCGAGAAGGTTGTGGATTCAAACGGAGAATCTGTTCCTTT 1784 Query 1884 AACTGAAGAACGGATTACGAGTATCTCTGATATCATAGAGGGTTTTGCCTCAGAGGCTCT 1943 | |||||||| |||| | |||||||||||| |||||||||| ||||| ||||||||||| Sbjct 1785 ATCTGAAGAAAAGATTGCAAGTATCTCTGATGTCATAGAGGGATTTGCTTCAGAGGCTCT 1844 Query 1944 GAGGACTCTCTGCTTGGTTTACAAAGATCTAGATGAAGCTCCCAGT-GGAGAGCTCCCTG 2002 ||| ||||||||||| ||||||| ||||| ||||||||||||| | ||| | || |||| Sbjct 1845 GAGAACTCTCTGCTTAGTTTACACGGATCTTGATGAAGCTCCCAATGGGA-ATCTTCCTG 1903 Query 2003 ATGGAGGCTATACAATGGTAGCAGTTGTTGGAATCAAGGATCCAGTACGTCCGGGTGTTA 2062 |||| ||||| ||| |||| |||||||||||||||||||| || || || || ||||||| Sbjct 1904 ATGGTGGCTACACATTGGTTGCAGTTGTTGGAATCAAGGACCCGGTTCGCCCTGGTGTTA 1963 Query 2063 GGGAAGCCGTTCAGACTTGTCAAGCTGCCGGAATCACCGTCCGTATGGTCACTGGAGATA 2122 |||||||||||||||||||||||||||| |||||||| || |||||||||||||| |||| Sbjct 1964 GGGAAGCCGTTCAGACTTGTCAAGCTGCTGGAATCACTGTTCGTATGGTCACTGGTGATA 2023 Query 2123 ACATAAGCACAGCCAAAGCAATTGCTAAGGAATGTGGCATA-TATACCGAAGGAGGCT-T 2180 |||||||||| |||||||| ||||| ||||||||||| ||| | ||| | |||||| | | Sbjct 2024 ACATAAGCACTGCCAAAGCGATTGCAAAGGAATGTGGTATACT-TACAGCAGGAGG-TGT 2081 Query 2181 AGCTATAGAAGGTTCAGAATTCCGGGACTTGTCTCCTCACGAAATGAGGGCCATTATCCC 2240 |||||||||||||||||| ||||| | ||| |||| || ||||||||||||||| | || Sbjct 2082 AGCTATAGAAGGTTCAGAGTTCCGCAATTTGCCTCCACATGAAATGAGGGCCATTTTACC 2141 Query 2241 CAAAATTCAGGTAATGGCTCGGTCTCTGCCATTGGACAAACATACTTTAGTCAGCAACTT 2300 |||||||||||| |||||||||||| ||||||||||||||||||| ||||||| |||||| Sbjct 2142 CAAAATTCAGGTGATGGCTCGGTCTTTGCCATTGGACAAACATACATTAGTCAACAACTT 2201 Query 2301 GAGGAAAATTGGAGAGGTAGTTGCAGTGACAGGGGATGGGACAAACGATGCCCCTGCGTT 2360 ||||||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct 2202 GAGGAAAATGGGAGAGGTAGTTGCAGTGACCGGGGATGGAACAAATGATGCTCCTGCATT 2261 Query 2361 GCATGAGGCAGACATTGGACTAGCAATGGGAATAGCTGGAACAGAGGTTGCGAAAGAGAA 2420 ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 2262 GCATGAGGCTGACATTGGACTTGCCATGGGAATAGCTGGAACAGAGGTTGCGAAAGAGAA 2321 Query 2421 TGCTGATGTGATCATAATGGACGATAACTTCAAAACAATAGTAAATGTGGCTAGATGGGG 2480 ||||||||| ||||||||||| || ||||| ||||||||| |||||||| |||||||| Sbjct 2322 TGCTGATGTAATCATAATGGATGACAACTTTGCAACAATAGTGAATGTGGCGAGATGGGG 2381 Query 2481 ACGTGCTGTATATATAAACATTCAGAAGTTTGTTCAGTTCCAGCTAACTGTTAATGTGGT 2540 ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct 2382 ACGTGCTGTGTATATTAACATCCAGAAGTTTGTTCAGTTCCAGCTAACTGTTAATGTTGT 2441 Query 2541 TGCTCTGATCATCAACTTTGTCTCTGCTTGCATCACAGGATCTGCTCCACTCACTGCTGT 2600 |||| ||||||||||||||||||||||||||||||| ||| |||| ||||||||||| || Sbjct 2442 TGCTTTGATCATCAACTTTGTCTCTGCTTGCATCACCGGAGCTGCGCCACTCACTGCAGT 2501 Query 2601 GCAACTGCTTTGGGTCAACATGATCATGGACACACTTGGTGCATTGGCTCTAGCAACAGA 2660 |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct 2502 GCAACTACTTTGGGTGAACATGATCATGGACACACTCGGTGCATTGGCTCTAGCAACCGA 2561 Query 2661 ACCTCCCAATGAAGGTTTAATGAAACGTGCA-CCAATAGCTAGAACCGCCAGCTTTATCA 2719 ||||||||| |||||||||||||||||| || ||||| ||||||||||| ||||| |||| Sbjct 2562 ACCTCCCAACGAAGGTTTAATGAAACGT-CAACCAATCGCTAGAACCGCAAGCTTCATCA 2620 Query 2720 CCAAAACCATGTGGAGAAACATCGCTGGTCAAAGCGTTTACCAGTTGATTGTC-TTAGGA 2778 ||| | | ||||||||||||||| |||||||||| |||| ||||| || ||| || || Sbjct 2621 CCAGAGCTATGTGGAGAAACATCATTGGTCAAAGCATTTATCAGTTAATCGTCCTT-GGC 2679 Query 2779 ATTCTCAA-TTTCGCAGGCAAATCACTT-CTCAAACT-AGATGGCCCTGACTCCACAGCC 2835 || ||||| ||| || |||||| || | ||||| || | | ||||| || || ||||| Sbjct 2680 ATCCTCAACTTT-GCTGGCAAA-CAAATACTCAACCTCA-ACGGCCCAGATTCAACAGCT 2736 Query 2836 GTTCTTAACAC-AGTCATCTTCAACTCCTTCGTCTTTTGCCAGGTGTTCAATGA-GATCA 2893 ||||| || || | ||||||||||||||||||||||||| |||||||| ||||| | | | Sbjct 2737 GTTCTCAATACCA-TCATCTTCAACTCCTTCGTCTTTTGTCAGGTGTTTAATGAAG-TAA 2794 Query 2894 ATAGCCGGGAAATAGAGAAGATAAATGTGTTCAAAGGAATGTTCAATAGCTGGGTGTTCA 2953 | ||||| || |||||||||||||| |||||||||||||||||||| || |||||||| Sbjct 2795 ACAGCCGAGAGATAGAGAAGATAAACGTGTTCAAAGGAATGTTCAAGAGTTGGGTGTTTG 2854 Query 2954 CTTGGGTAATGACTGTGACGGTAGTGTTTC-AAGTGATCATAGTGGAGTTTCTTGGAGCA 3012 || |||||||||| || || | | ||| |||||||||| || ||||| ||||||||| Sbjct 2855 TTTCTGTAATGACTGCAACAGTTG-GATTCCAAGTGATCATTGTTGAGTTCCTTGGAGCA 2913 Query 3013 TTTGCTAGCACCGTTCCTCTGAGCTGGCAACATTGGTTACTAT-CAATCTTGATAGGATC 3071 ||||| ||||| |||||| ||||||||||||||||| | || | || | ||||| || || Sbjct 2914 TTTGCAAGCACTGTTCCTTTGAGCTGGCAACATTGGCTGCTCTGCATT-TTGATTGGTTC 2972 Query 3072 ATTGAA-CATGATTGTAGCCGTTA-TCCTCAAATGCGTACCTGTCGAGTCTCGTCACCAT 3129 | || ||||||| |||||||| || | |||||| |||| || |||||| | ||| Sbjct 2973 CGT-AAGCATGATTCTAGCCGTTGGTCTT-AAATGCATACCGGTTGAGTCTAACCGTCAT 3030 Query 3130 CACGATGGCTACGACCTGCTTCCTTCTGGTCCTTCT 3165 ||||||||||| || ||||||||||||||||| ||| Sbjct 3031 CACGATGGCTATGAGCTGCTTCCTTCTGGTCCATCT 3066 > Ahg899595 jgi|Araly1|899595|Al_scaffold_0004_245 Length=3048 Score = 283 bits (153), Expect = 5e-75 Identities = 345/437 (79%), Gaps = 15/437 (3%) Strand=Plus/Plus Query 2239 CCCAAAATTCAGGTAATGGCTCGGTC-TCTGCCAT-TGGACAAACATACTTTAGT-CAGC 2295 ||||| |||||||| |||||||| || || ||| | ||||||| ||||| | || ||| Sbjct 2167 CCCAAGATTCAGGTGATGGCTCGTTCTTC-GCC-TATGGACAAGCATACACTGGTGAAGC 2224 Query 2296 AACTTGAGGA--AAATTGGA-GAGGTAGTTGCAGTGACAGGGGATGGGACAAACGATGCC 2352 | || |||| | || || || || ||||| ||||| || || |||||||||||||| Sbjct 2225 -AGTTAAGGACCACTTTTGATGAAGTTGTTGCCGTGACTGGTGACGGGACAAACGATGCA 2283 Query 2353 CCTGCGTTGCATGAGGCAGACATTGGACTAGCAATGGGAATAGCTGGAACAGAGGTTGCG 2412 || || | || ||||| ||||| ||| |||||||||| || || |||||||| || ||| Sbjct 2284 CCAGCACTCCACGAGGCTGACATAGGATTAGCAATGGGCATTGCCGGAACAGAAGTAGCG 2343 Query 2413 AAAGAGAATGCTGATGTGATCATAATGGACGATAACTTCAAAACAATAGT-AAATGTGGC 2471 ||||||| || ||||| ||||| | |||||||| |||| ||||| || | | || || Sbjct 2344 AAAGAGAGCGCGGATGTCATCATTCTCGACGATAATTTCAGCACAATCGTCACA-GTAGC 2402 Query 2472 TAGATGGGGACGTGCTGTATATATAAACATTCAGAAGTTTGTTCAGTTCCAGCTAACTGT 2531 | |||||||||| |||| || || ||||| ||||| ||||| ||||| |||||||| || Sbjct 2403 GAAATGGGGACGTTCTGTTTACATTAACATACAGAAATTTGTGCAGTTTCAGCTAACAGT 2462 Query 2532 TAATGTGGTTGCTCTGATCATCAACTTTGTC-TCTGCTTGCATCACAGGATCTGCTCCAC 2590 ||||| ||||| || || | ||| || || || |||||| | || ||| |||||| | Sbjct 2463 CAATGTTGTTGCCCTCATTGTTAAC-TTCTCTTCAGCTTGCTTGACTGGAAGTGCTCCCC 2521 Query 2591 TCACTGCTGTGCAACTGCTTTGGGTCAACATGATCATGGACACACTTGGTGCA-TTGGCT 2649 | |||||||||||||||||||||||||||||||| |||||||||||||| || ||| || Sbjct 2522 TAACTGCTGTGCAACTGCTTTGGGTCAACATGATAATGGACACACTTGGAGCTCTTG-CT 2580 Query 2650 CTAGCAACAGAACCTCC 2666 ||||| ||||||||||| Sbjct 2581 CTAGCTACAGAACCTCC 2597 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 126655602944 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5