BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G45810.1
Length=2329
Score E
Sequences producing significant alignments: (Bits) Value
Ahg483719 jgi|Araly1|483719|fgenesh2_kg.4__2779__AT2G45810.1 3317 0.0
Ahg486601 jgi|Araly1|486601|fgenesh2_kg.5__2593__AT3G61240.1 1452 0.0
> Ahg483719 jgi|Araly1|483719|fgenesh2_kg.4__2779__AT2G45810.1
Length=2253
Score = 3317 bits (1796), Expect = 0.0
Identities = 2146/2304 (93%), Gaps = 68/2304 (3%)
Strand=Plus/Plus
Query 30 CGGTTTTGTGGATAATTGTTAG-CATATTCCGATCTTGCCCTCCCCCGAGAGAGAGAGTC 88
||||||||||||||||||| || || |||||||||||||||||||||||||||||||
Sbjct 1 CGGTTTTGTGGATAATTGTCAGTAAT-TTCCGATCTTGCCCTCCCCCGAGAGAGAGAG-- 57
Query 89 caatcaatcaatcaatcaatcatcTCTTACGAAGCTACGTGTGACCTAACATTCTCCAGA 148
|||||||||||||||| ||||| ||| || |||| ||||| |||||
Sbjct 58 --------------ATCAATCATCTCTTACAAAGCTCCGTTTGTCCTACCATTCACCAGA 103
Query 149 TTGTTGTTTATAGCCTCTTCTTAGATTTACGATTTGTGAGCTTGTGAAGATTTCTTGGTA 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 104 TTGTTGTTTATAGCCTCTTCTTAGATTTACGATTTGTGAGCTTGTGAAGATTTCTTGGTA 163
Query 209 GAATTAGAGTTCTCTGTTTCGAGATCGAGATGaataataataataataataGAGGAAGAT 268
|||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 164 GAATTAGAGTTCTCTGTTTCGAGATCGAGATG---------AATAATAATAGAGGAAGGT 214
Query 269 TTCCACCGGGGATTGGTGCGGCGGGTCCTGGTCCGGATCCTAATTTTCAGTCACGGAATC 328
|||||||||||||||| || || | |||||||||||||||||||||||||||||||
Sbjct 215 TTCCACCGGGGATTGGAGCTGC--G----GGTCCGGATCCTAATTTTCAGTCACGGAATC 268
Query 329 CG-A----A----TC--C-ACCTCAGCCTCAACAGTACCTTCAGTCACGGACTCCGTTTC 376
|| | | || | |||||||||||||||||||||||||||||||||||||||||
Sbjct 269 CGAATCCCAGTCCTCATCAACCTCAGCCTCAACAGTACCTTCAGTCACGGACTCCGTTTC 328
Query 377 CACAGCAACCTCAGCCTCAGCCTCCTCAGTATCTCCAGTCTCAATCTGATGCTCAGCAGT 436
||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||
Sbjct 329 CACAGCAACCTCAAACTCAGCCTCCACAGTATCTCCACTCTCAACCTGATGCTCAGCAGT 388
Query 437 ACGTTCAGCGAGGTTATCCCcagcagattcaacagcaacagcaactgcagcagcaacaac 496
|||||||||| |||||||| ||||||||| ||| || | |||||||
Sbjct 389 ACGTTCAGCGTGGTTATCCTCAGCAGATT------------CAA---CA--A-CAACAAC 430
Query 497 aacaacaacagcagcagcaagaacaacaaTGGTCTCGACGGGCTCAGCTTCCTGGTGATC 556
|||| || |||||||| ||| |||||||||||||| |||| ||||||||||||||||||
Sbjct 431 AACAGCAGCAGCAGCAACAACAACAACAATGGTCTAGACGCCCTCAGCTTCCTGGTGATC 490
Query 557 CAAGTTACATAGATGAGGTCGAAAAAACGGTTCAATCTGAAGCTATTAGCGATTCTAATA 616
||||||| |||| || ||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 491 CAAGTTATGTAGACGAAGTCGAGAAAACGGTTCAATCTGAAGCTATCAGCGATTCTAATA 550
Query 617 ATGAAGACTGGAAAGCAACCTTAAAGCTGCCACCACGAGATAATCGTTACCAGACAGAGG 676
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 551 ATGATGACTGGAAAGCAACCTTAAAGCTGCCACCACGAGATAATCGTTACCAGACAGAGG 610
Query 677 ATGTGACTGCCACTAAAGGAAATGAATTTGAAGATTACTTTTTGAAGAGGGATCTGCTTA 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 ATGTGACTGCCACTAAAGGAAATGAATTTGAAGATTACTTTTTGAAGAGGGATCTGCTTA 670
Query 737 GGGGAATATATGAGAAGGGTTTTGAAAAACCATCTCCTATTCAGGAAGAAAGCATTCCCA 796
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 671 GGGGAATATATGAGAAGGGTTTTGAAAAACCATCTCCTATTCAGGAAGAAAGCATTCCAA 730
Query 797 TTGCTTTGACTGGTAGTGATATTCTTGCTAGAGCCAAAAATGGTACTGGGAAGACTGGTG 856
||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 731 TTGCTTTGACTGGCAGTGATATTCTTGCTAGAGCCAAAAATGGGACTGGCAAGACTGGTG 790
Query 857 CCTTCTGCATTCCTACCCTTGAGAAAATTGATCCAGAGAACAATGTCATTCAAGCCGTAA 916
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 791 CCTTCTGCATTCCTACCCTTGAGAAAATTGATCCCGAGAACAATGTCATCCAAGCCGTAA 850
Query 917 TTCTAGTTCCAACCCGAGAGCTCGCCCTTCAGACATCCCAGGTTTGCAAGGAGCTTTCCA 976
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 851 TTCTAGTTCCAACCCGAGAGCTGGCCCTTCAGACATCCCAGGTTTGCAAGGAGCTTTCCA 910
Query 977 AATATTTGAAAATTGAGGTTATGGTCACCACTGGCGGTACCAGTCTGAGGGATGATATCA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 911 AATATTTGAAAATTGAGGTTATGGTCACCACTGGCGGTACCAGTCTGAGGGATGATATCA 970
Query 1037 TGCGATTGTATCAACCTGTCCATTTACTGGTTGGAACTCCTGGAAGAATATTAGATCTTG 1096
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 971 TGCGATTATATCAACCTGTCCATTTGTTGGTTGGAACTCCTGGAAGAATATTAGATCTTG 1030
Query 1097 CCAAAAAGGGTGTGTGTGTTTTGAAAGATTGTGCCATGCTTGTAATGGATGAGGCCGACA 1156
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1031 CCAAAAAGGGTGTGTGTGTTTTGAAAGATTGTGCGATGCTTGTAATGGATGAAGCCGACA 1090
Query 1157 AGCTTTTGTCTGTAGAATTTCAACCTTCTATAGAGGAGTTGATACAGTTCTTGCCAGAGA 1216
||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 1091 AGCTTTTGTCTGTAGAATTTCAACCGTCTATTGAGGAGTTGATACAGTTCTTACCAGAGA 1150
Query 1217 GCCGGCAGATTTTGATGTTTTCAGCTACATTTCCTGTCACTGTGAAGTCTTTCAAGGATC 1276
||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1151 ACCGTCAGATTCTGATGTTTTCAGCTACATTTCCTGTCACTGTGAAGTCTTTCAAGGATC 1210
Query 1277 GGTATCTCAAGAAGCCTTACATTATCAATCTCATGGATCAGCTCACACTTATGGGTGTTA 1336
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1211 GATATCTCAGGAAGCCTTACATTATCAATCTCATGGATCAGCTCACACTTATGGGTGTTA 1270
Query 1337 CCCAATATTATGCTTTTGTTGAAGAGAGACAGAAGGTGCACTGCCTTAACACGCTATTCT 1396
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1271 CCCAATATTATGCTTTTGTTGAAGAGAGGCAGAAGGTGCACTGCCTTAACACGCTATTCT 1330
Query 1397 CTAAGCTCCAAATAAACCAATCCATTATCTTTTGCAACTCTGTTAATCGTGTTGAGCTGT 1456
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 CTAAGCTACAAATAAACCAATCCATTATCTTTTGCAACTCTGTTAATCGTGTTGAGCTGT 1390
Query 1457 TGGCCAAGAAAATTACAGAACTTGGTTACTCATGCTTCTATATCCATGCAAAGATGGTTC 1516
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1391 TGGCCAAGAAAATAACAGAACTCGGTTACTCATGCTTCTATATCCATGCAAAGATGGTTC 1450
Query 1517 AAGACCATCGGAACAGGGTTTTCCATGATTTCCGCAATGGTGCATGCAGAAATCTTGTTT 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1451 AAGACCATCGGAACAGGGTTTTCCATGATTTCCGCAATGGTGCATGCAGAAATCTTGTTT 1510
Query 1577 GCACTGATTTGTTTACACGTGGGATTGACATTCAAGCTGTGAATGTGGTGATAAATTTCG 1636
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1511 GCACTGATTTGTTTACACGTGGGATTGACATTCAAGCTGTGAATGTGGTCATAAATTTCG 1570
Query 1637 ATTTTCCTAGGACTTCTGAGTCGTATCTACATAGGGTAGGCAGATCAGGACGATTTGGAC 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1571 ATTTTCCTAGGACTTCTGAGTCGTATCTACATAGGGTAGGCAGATCAGGACGATTCGGAC 1630
Query 1697 ACCTTGGGTTGGCTGTGAATTTGGTAACTTATGAGGACCGCTTCAAAATGTATCAGACAG 1756
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1631 ACCTTGGATTGGCTGTGAATTTGGTAACTTATGAGGACCGCTTCAAAATGTATCAGACTG 1690
Query 1757 AGCAAGAACTTGGAACTGAAATCAAGCCCATACCTTCACTTATCGACAAGGCAATCTACT 1816
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1691 AGCAAGAACTTGGAACCGAAATCAAGCCCATACCTTCACTTATCGACAAGGCAATCTACT 1750
Query 1817 GTCAGTAACTTCTACCTGGTGTACATTCTCTACCCGGCAAGGCATTGATGGACTAACCGG 1876
|||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||
Sbjct 1751 GTCAGTAACTTCTACCTGGTGTACATTCTCCACCCGGCAATGCATTGATGGATTAACCGG 1810
Query 1877 TGTAGTGAGGAGGCAAATCATTCAGCTTTGGCAGCCACTAGCTCGTTCTAGAGATGAAGG 1936
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1811 TGTATTGAGGAGGCAAATCATTCAGCTTTGGCAGCCACTAGCTCGTTCTAGAGATGAAGG 1870
Query 1937 CAACACATAGAGTACTGTACTGAGGCAAGAAGAGACAGTATAGGTGGTTGATGGCGATGG 1996
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1871 CAACACAGAGAGTACTGTACTGAGGCAAGAAGAGGCAGTATAGGTGGTTGATGGCGATGG 1930
Query 1997 AAGCGGTTGATTGTGTCTAAACCTTTAAAGCAGTACCGGCTTGATTTGGTTTGAATTGAA 2056
|||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 1931 AAGCGGTTGATTGTATCTAAACCTTTAAAGCAGTACTGGCTTGATTTGGTTTGGGTTGAA 1990
Query 2057 GACTTCTTCTGCTGCATGATATGAACCTTAAAGTTGTCTTCTCTCATCTCTAATTTTCAT 2116
||||| ||||||||||||||||||||||||||||||||||||||||||| | |||| |||
Sbjct 1991 GACTTATTCTGCTGCATGATATGAACCTTAAAGTTGTCTTCTCTCATCTATCATTTCCAT 2050
Query 2117 GTTCTTAGAAACCTTTTCACCTTTTCATTTTGATGTTCTCTC--ATCTTGAAGACTTGAG 2174
||||| ||||||||||| |||||||||||| |||||||||| |||||||||||||| |
Sbjct 2051 GTTCTAAGAAACCTTTTG-CCTTTTCATTTTCATGTTCTCTCTCATCTTGAAGACTTGGG 2109
Query 2175 AGGAATTTCCGAGTAGTGAGATCAAACCGAAGAAGACATTTTAACTTCATTCGCTTGTTT 2234
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2110 AGGAATTTCCGAGTAGTGAGATCAAACCGAAGAAGACATTTTTACTTCATTCGCTTGTTT 2169
Query 2235 ATTGCTTTTAGATCTCCACCTGTGCCTGAACTGTTTAAGGATTATAGTTGGT--GTGTGT 2292
|||||||| | ||||||||||||| ||||||| | |||| || |||||| | ||||||
Sbjct 2170 ATTGCTTTCAAATCTCCACCTGTGTCTGAACTATCAAAGGGTTTTAGTTGATTTGTGTGT 2229
Query 2293 CAAGTCAAGTGTCTTAGCATTTTA 2316
|||||||||||||||| |||||||
Sbjct 2230 CAAGTCAAGTGTCTTAACATTTTA 2253
> Ahg486601 jgi|Araly1|486601|fgenesh2_kg.5__2593__AT3G61240.1
Length=2313
Score = 1452 bits (786), Expect = 0.0
Identities = 1208/1411 (86%), Gaps = 32/1411 (2%)
Strand=Plus/Plus
Query 429 TCAGCAGTACGTTCAGCGAGGTTATCCCcagcagattcaacagcaaca-gcaactgcagc 487
||||||||| ||||| || |||||| | ||||| || |||| | | |||||| ||
Sbjct 442 TCAGCAGTATGTTCAACGCGGTTAT--TC-GCAGAATCCTCAGC-AGATGCAACT---GC 494
Query 488 agcaacaacaacaacaacagcagcagcaagaacaacaaTGGTCTCGACGGGCTCAGCTTC 547
|||||||||| || |||||||| |||| || ||||| ||||| |||| |||||||||
Sbjct 495 AGCAACAACATCATCAACAGCAACAGC-AG--CAACAGTGGTCAAGACGCCCTCAGCTTC 551
Query 548 CTGGTGATC-CAAGTTAC-ATAGATGAGG-TCGAAAAAACGGT-TCAATCTGAAGCTATT 603
|||| | | | ||| || || | |||| || || | || || ||| | ||| |||
Sbjct 552 CTGG-AAACGCTAGTAACGCTA-ACGAGGTTC-AACAGAC-GTCTCAGCCCGAAACTAGC 607
Query 604 AGCGATTCTAATAATGAAGACTGGAAAGCAACCTTAAAGCTGCCACCACGAGATAATCGT 663
|||||| ||||| | |||||||||| ||||| |||| ||| ||||| | |||| ||||
Sbjct 608 AGCGATGCTAATGGTCAAGACTGGAAGGCAACGTTAAGGCTCCCACCTCCTGATACTCGT 667
Query 664 TACCAGACAGAGGATGTGACTGCCACTAAAGGAAATGAATTTGAAGATTACTTTTTGAAG 723
|| ||||||| ||||||||| || || |||||||||||||| |||||||||||| ||||
Sbjct 668 TATCAGACAGCGGATGTGACAGCTACGAAAGGAAATGAATTCGAAGATTACTTTCTGAAA 727
Query 724 AGGGATCTGCTT-AGGGGAATATATGAGAAGGGTTTTGAAAAACCATCTCCTATTCAGGA 782
|| |||||| || | |||||||||||||||||||||||| || |||||||| ||||| ||
Sbjct 728 AGAGATCTG-TTAAAGGGAATATATGAGAAGGGTTTTGAGAAGCCATCTCCAATTCAAGA 786
Query 783 AGAAAGCATTCCCATTGCTTTGACTGGTAGTGATATTCTTGCTAGAGCCAAAAATGGTAC 842
||| |||||||| || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 787 AGAGAGCATTCCAATCGCTTTAACTGGTAGTGATATTCTTGCTAGAGCCAAAAACGGTAC 846
Query 843 TGGGAAGACTGGTGCCTTCTGCATTCCTA-CCCTTGAGAAAATTGATCCAGAGAACAATG 901
|| ||||||||||||||||||||||| | ||| ||||||||||||||| ||||| |
Sbjct 847 AGGAAAGACTGGTGCCTTCTGCATTCC-AGTCCTCGAGAAAATTGATCCATCTAACAACG 905
Query 902 TCATTCAAGCCGTAATTCTAGTTCCAACCCGAGAGCTCGCCCTTCAGACATCCCAGGTTT 961
| ||||||||| | |||||||||||||| |||||||| |||||||||||||| || ||||
Sbjct 906 TTATTCAAGCCATGATTCTAGTTCCAACGCGAGAGCTGGCCCTTCAGACATCACAAGTTT 965
Query 962 GCAAGGAGCTTTCCAAATATTTGAAAATTGAGGTTATGGTCACCACTGGCGGTACCAGTC 1021
|||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||||
Sbjct 966 GCAAGGAGCTTTCCAAATATCTGAATATCCAGGTTATGGTCACTACTGGCGGTACCAGTC 1025
Query 1022 TGAGGGATGATATCATGCGATTGTATCAACCTGTCCATTTACTGGTTGGAACTCCTGGAA 1081
|||| |||||||| |||||||| |||| ||||| ||| |||||||||||||||||||||
Sbjct 1026 TGAGAGATGATATTATGCGATTACATCAGCCTGTGCATCTACTGGTTGGAACTCCTGGAA 1085
Query 1082 GAATATTAGATCTTGCCAAAAAGGGTGTGTGTGTTTTGAAAGATTGTGCCATGCTTGTAA 1141
||||||| |||||| | ||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct 1086 GAATATTGGATCTTACAAAAAAGGGTGTCTGTGTTTTGAAAGACTGTGCGATGCTTGTAA 1145
Query 1142 TGGATGAGGCCGACAAGCTTTTGTCTGTAGAATTTCAACCTTCTATAGAGGAGTTGATAC 1201
|||||||||||||||||||||| |||| ||||| ||||||||| | ||||| |||||||
Sbjct 1146 TGGATGAGGCCGACAAGCTTTTATCTGCGGAATTCCAACCTTCTCTTGAGGAATTGATAC 1205
Query 1202 AG-TTCTTGCCAGAGAGCCGGCAGA-TTTTGATGTTTTCAGCTACATTTCCTGTCACTGT 1259
|| ||| |||| | | || || | ||||||||||||| |||||||| |||||||||||
Sbjct 1206 AGTTTC-TGCCCCAAAATCGTCA-ATTTTTGATGTTTTCTGCTACATTCCCTGTCACTGT 1263
Query 1260 GAAGTCTTTCAAGGATCGGTATCTCAAGAAGCCTTACATTATCAATCTCATGGATCAGCT 1319
|||| |||| |||||||| ||||| |||||| || ||||||||||||||||||| ||
Sbjct 1264 GAAGGCTTTTAAGGATCGACATCTCCGGAAGCCCTATGTTATCAATCTCATGGATCAACT 1323
Query 1320 CACACTTATGGGTGTTACCCAATATTATGCTTTTGTTGAAGAGAGACAGAAGGTGCACTG 1379
||| ||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1324 CACGCTTATGGGTGTCACGCAATATTATGCTTTTGTTGAAGAAAGACAGAAGGTTCACTG 1383
Query 1380 CCTTAACACGCTATTCTCTAAGCTCCAAATAAACCAATCCATTATCTTTTGCAACTCTGT 1439
||| ||||| || ||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct 1384 CCTCAACACACTTTTCTCTAAGCTGCAAATAAATCAATCGATAATCTTTTGCAACTCTGT 1443
Query 1440 TAATCGTGTTGAGCTGTTGGCCAAGAAAATTACAGAACTTGGTTACTCATGCTTCTATAT 1499
||||| || ||||||||||| |||||||| |||||||||||||| ||||||||||| ||
Sbjct 1444 CAATCGCGTGGAGCTGTTGGCTAAGAAAATCACAGAACTTGGTTATTCATGCTTCTACAT 1503
Query 1500 CCATGCAAAGATGGTTCAAGACCATCGGAACAGGGTTTTCCATGATTTCCGCAATGGTGC 1559
||||| |||||||||||||||||| ||||||| || ||||| || ||||||||||||||
Sbjct 1504 TCATGCGAAGATGGTTCAAGACCATAGGAACAGAGTATTCCACGAGTTCCGCAATGGTGC 1563
Query 1560 ATGCAGAAATCTTGTTTGCACTGATTTGTTTACACGTGGGATTGACATTCAAGCTGTGAA 1619
||||| ||||| |||||||||||| ||||||| || || ||||||||||||||||||||
Sbjct 1564 CTGCAGGAATCTCGTTTGCACTGATCTGTTTACTCGAGGAATTGACATTCAAGCTGTGAA 1623
Query 1620 TGTGGTGATAAATTTCGATTTTCCTAGGACTTCTGAGTCGTATCTACATAGGGTAGGCAG 1679
||| ||||| || ||||||||||| |||||||||||||| |||||||| ||||| ||| |
Sbjct 1624 TGTAGTGATCAACTTCGATTTTCCAAGGACTTCTGAGTCATATCTACACAGGGTGGGCCG 1683
Query 1680 ATCAGGACGATTTGGACACCTTGGGTTGGCTGTGAATTTGGTAACTTATGAGGACCGCTT 1739
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1684 ATCAGGACGGTTTGGACACCTTGGGTTGGCTGTGAATTTGGTAACTTACGAGGACCGTTT 1743
Query 1740 CAAAATGTATCAGACAGAGCAAGAACTTGGAACTGAAATCAAGCCCATACCTTC-ACTTA 1798
||||||||||||||| || ||||||||||| ||||||||||| || || ||||| | | |
Sbjct 1744 CAAAATGTATCAGACTGAACAAGAACTTGGGACTGAAATCAAACCAATTCCTTCTAAT-A 1802
Query 1799 TCGA-CAAGGCAATCTACTGTCAGTAA-CTT 1827
|||| |||| | ||||||||||||||| |||
Sbjct 1803 TCGATCAAG-CTATCTACTGTCAGTAAACTT 1832
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87721834235
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5