BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G02990.1
Length=1864
Score E
Sequences producing significant alignments: (Bits) Value
Ahg477545 jgi|Araly1|477545|fgenesh2_kg.3__246__AT3G02990.1 2318 0.0
Ahg927794 jgi|Araly1|927794|scaffold_300251.1 1424 0.0
Ahg488541 jgi|Araly1|488541|fgenesh2_kg.6__1675__AT5G16820.1 656 0.0
Ahg939759 jgi|Araly1|939759|scaffold_600303.1 115 1e-24
Ahg927795 jgi|Araly1|927795|scaffold_300252.1 58.4 2e-07
> Ahg477545 jgi|Araly1|477545|fgenesh2_kg.3__246__AT3G02990.1
Length=1584
Score = 2318 bits (1255), Expect = 0.0
Identities = 1390/1457 (95%), Gaps = 2/1457 (0%)
Strand=Plus/Plus
Query 183 CGACGGCGGTGATGAGCTCCATTCCGCCTTTTCTGAGCAAAACGTACGATATGGTTGACG 242
||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||
Sbjct 128 CGACGGCGGTGATGAGCTCTATCCCGCCTTTTCTGAGCAAAACCTACGATATGGTTGACG 187
Query 243 ATCCATTGACGGACGACGTGGTGTCTTGGAGCAGCGGAAACAACAGCTTCGTGGTTTGGA 302
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 188 ATCCATTGACGGACGACGTGGTGTCTTGGAGCAGCGGCAACAACAGCTTCGTGGTTTGGA 247
Query 303 ACGTGCCTGAGTTCGCCAAACAGTTTCTACCAAAGTATTTCAAGCACAACAATTTCTCCA 362
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 248 ACGTGCCTGAGTTCGCGAAACAGTTTCTACCAAAGTATTTCAAGCACAACAATTTCTCCA 307
Query 363 GCTTCGTCAGACAGCTCAATACTTATGGTTTTAGAAAAGTTGATCCAGACCGCTGGGAGT 422
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 308 GTTTCGTCAGACAGCTCAATACTTATGGTTTCAGAAAAGTTGATCCAGACCGCTGGGAGT 367
Query 423 TTGCAAACGAGGGCTTTTTAAGAGGCCAAAAGCAAATACTAAAGAGTATTGTCCGGCGAA 482
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 368 TTGCAAATGAGGGCTTTTTAAGAGGCCAAAAACAAATACTAAAGAGTATTGTCCGGCGAA 427
Query 483 AACCTGCACAAGTGCAGCCTCCACAACAACCTCAAGTTCAGCACTCATCTGTGGGTGCGT 542
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 428 AACCTTCGCAAGTGCAGCCTCCACAACAACCTCAAGTTCAGCACTCATCTGTGGGTGCGT 487
Query 543 GCGTTGAAGTGGGCAAATTTGGACTCGAAGAGGAAGTGGAAAGACTTCAGCGCGATAAGA 602
||||||||||||||||||||||||||||||| || ||||||||||||||| | |||||||
Sbjct 488 GCGTTGAAGTGGGCAAATTTGGACTCGAAGAAGAGGTGGAAAGACTTCAGAGGGATAAGA 547
Query 603 ACGTCCTTATGCAGGAACTTGTAAGGTTGAGGCAGCAACAACAAGTTACCGAACATCATC 662
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 548 ACGTCCTTATGCAGGAACTTGTAAGGTTAAGGCAGCAACAACAAGTTACCGAACATCATC 607
Query 663 TGCAGAATGTGGGGCAGAAAGTTCATGTGATGGAGCAGAGGCAGCAACAGATGATGTCCT 722
|||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 608 TGCAAAATGTGGGACAGAAAGTTCATGTGATGGAGCAGAGGCAGCAACAAATGATGTCCT 667
Query 723 TTCTAGCAAAGGCTGTCCAAAGTCCAGGTTTCTTAAACCAATTTTCTCAGCAGAGTAATG 782
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 668 TTCTAGCAAAGGCTGTTCAAAGTCCAGGTTTCTTAAACCAATTTTCCCAGCAGAGTAATG 727
Query 783 AAGCAAACCAACACATTTCTGAAAGCAACAAAAAGAGGAGGCTACCTGTTGAGGACCAGA 842
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 728 ACGCAAACCAACACATTTCTGAAAGCAACAAAAAGAGGAGGCTACCTGTTGAGGACCAGA 787
Query 843 TGAATTCTGGCAGTCATGGGGTTAATGGTCTTAGCCGCCAGATTGTGAGATATCAGTCAT 902
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 788 TGAATTCTGGCAGTCATGGGGTCAGCGGTCTTAGCCGCCAGATTGTGAGATATCAGTCAT 847
Query 903 CGATGAACGATGCAACAAACACTATGCTTCAACAGATACAGCAGATGAGTAATGCACCTA 962
|||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||
Sbjct 848 CGATGAACGATGCAACAAACACTATGCTCCAACAGATACAACAGATGAGTAATTCACCTA 907
Query 963 GCCATGAATCTCTCTCAAGCAATAATGGTAGCTTTCTTTTGGGCGATGTTCCAAATTCTA 1022
||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
Sbjct 908 GCCATGAATCTCTCTCAAGCAATCATGGCAGCTTTCTTTTGGGCGATGTTCCAAATTCCA 967
Query 1023 ACATTTCAGACAATGGGAGCTCCTCAAATGGATCACCTGAAGTTACATTGGCAGATGTTT 1082
|| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 968 ACCTTTCAGACAATGGGAGCTCCTCAAATGGATCATCTGGAGTTACATTGGCAGATGTTT 1027
Query 1083 CATCCATTCCTGCAGGCTTCTATCCTGCAATGAAGTACCACGAGCCTTGTGAAACAAATC 1142
||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||
Sbjct 1028 CATCCATTCCTGCAGGCTTATATCCTGCAATGAAGTATTACGACCCTTGTGAAACAAATC 1087
Query 1143 AAGTCATGGAGACCAATTTGCCTTTTTCTCAAGGTGATCTCTTACCTCCAACGCAAGGAG 1202
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 AAGTCCTGGAGACCAATTTACCTTTTTCTCAAGGTGATCTCTTACCTCCAACGCAAGGAG 1147
Query 1203 CAGCAGCTTCTGGGAGCTCAAGTTCGGATCTTGTTGGATGCGAGACAGATAATGGAGAGT 1262
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 1148 TAGCAGCTTCTGGGAGCTCGAGTTCGGATCTTGTTGGATGCGAGACAGATAATGGAGAAT 1207
Query 1263 GTTTGGATCCAATAATGGCTGTTTTGGATGGCGCACTCGAACTAGAAGCTGATACCTTAA 1322
||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||
Sbjct 1208 GTTTGGATCCAATAATGGCTGTTTTGGATGGTGCAATCGAACTAGAAGCTGATGCCTTAA 1267
Query 1323 ATGAGTTGCTTCCTGAAGTCCAAGATTCTTTTTGGGAACAGTTCATTGGTGAGAGCCCAG 1382
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 1268 ATGAGTTGCTTCCTGAAGTCCAAGATTGTTTTTGGGAACAGTTCATTGGTGAGAGTCCAG 1327
Query 1383 TGATTGGTGAGACAGATGAGTTAATCTCAGGATCAGTGGAAAATGAACTGATATTGGAGC 1442
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct 1328 TGATTGGTGAGACAGATGAGCTAATCTCAGGATCAGTGGAAAATGAACTGTTAATGGAGC 1387
Query 1443 AACTAGAGTTACAATCAACCCTGAGTAATGTGTGGAGCAAGAATCAACAAATGAACCATC 1502
| ||||| ||||||||| |||| ||| ||||||||||||||| ||||||||||||||||
Sbjct 1388 AGCTAGAATTACAATCAGGCCTGGGTAGTGTGTGGAGCAAGAACCAACAAATGAACCATC 1447
Query 1503 TTACTGAACAGATGGGACTTCTCACATCAGATGCTCTCAGAAAATGAGATTGCCAC-AGG 1561
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
Sbjct 1448 TTACTGAACAGATGGGACTTCTCACATCAGATACTCTCAGAAAATGAGATCGCCACGAAA 1507
Query 1562 CCACAATCTTTCCTCACGAGATGGGTTAAGATTTTGTGGAGCCGCAACAACAAA-AAGAA 1620
||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||
Sbjct 1508 TCACAATCTTTCCTCATGAGATGGGTTAAGATTTTGTGGAGTCGCAACAACAAATAAGAA 1567
Query 1621 TATGACCAAAGGAGGTA 1637
|||||||||||||||||
Sbjct 1568 TATGACCAAAGGAGGTA 1584
Score = 82.4 bits (44), Expect = 1e-14
Identities = 49/51 (96%), Gaps = 1/51 (2%)
Strand=Plus/Plus
Query 98 TTGTT-GAAGAAGACGGTACACCGGAATCAATTGCGATTTTGATTTATGGG 147
||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 66 TTGTTGGAAGAAGACGGAACACCGGAATCAATTGCGATTTTGATTTATGGG 116
> Ahg927794 jgi|Araly1|927794|scaffold_300251.1
Length=2215
Score = 1424 bits (771), Expect = 0.0
Identities = 839/873 (96%), Gaps = 0/873 (0%)
Strand=Plus/Plus
Query 680 AAAGTTCATGTGATGGAGCAGAGGCAGCAACAGATGATGTCCTTTCTAGCAAAGGCTGTC 739
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1326 AAAGTTCATGTGATGGAGCAGAGGCAGCAACAAATGATGTCCTTTCTAGCAAAGGCTGTT 1385
Query 740 CAAAGTCCAGGTTTCTTAAACCAATTTTCTCAGCAGAGTAATGAAGCAAACCAACACATT 799
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1386 CAAAGTCCAGGTTTCTTAAACCAATTTTCCCAGCAGAGTAATGAAGCAAACCAACACATT 1445
Query 800 TCTGAAAGCAACAAAAAGAGGAGGCTACCTGTTGAGGACCAGATGAATTCTGGCAGTCAT 859
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1446 TCTGAAAGCAACAAAAAGAGGAGGCTACCTGTTGAGGAGCAGATGAATTCTGGCAGTCAT 1505
Query 860 GGGGTTAATGGTCTTAGCCGCCAGATTGTGAGATATCAGTCATCGATGAACGATGCAACA 919
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1506 GGGGTCAGTGGTCTTAGCCGCCAGATTGTGAGATATCAGTCATCGATGAACGATGCAACA 1565
Query 920 AACACTATGCTTCAACAGATACAGCAGATGAGTAATGCACCTAGCCATGAATCTCTCTCA 979
||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 1566 AACACTATGCTCCAACAGATACAACAGATGAGTAATTCACCTAGCCATGAATCTCTCTCA 1625
Query 980 AGCAATAATGGTAGCTTTCTTTTGGGCGATGTTCCAAATTCTAACATTTCAGACAATGGG 1039
|||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 1626 AGCAATCATGGCAGCTTTCTTTTGGGCGATGTTCCAAATTCCAACCTTTCAGACAATGGG 1685
Query 1040 AGCTCCTCAAATGGATCACCTGAAGTTACATTGGCAGATGTTTCATCCATTCCTGCAGGC 1099
|||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1686 AGCTCCTCAAATGGATCATCTGGAGTTACATTGGCAGATGTTTCATCCATTCTTGCAGGC 1745
Query 1100 TTCTATCCTGCAATGAAGTACCACGAGCCTTGTGAAACAAATCAAGTCATGGAGACCAAT 1159
|| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 1746 TTATATCCTGCAATGAAGTACCACGACCCTTGTGAAACAAATCAAGTCCTGGAGACCAAT 1805
Query 1160 TTGCCTTTTTCTCAAGGTGATCTCTTACCTCCAACGCAAGGAGCAGCAGCTTCTGGGAGC 1219
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1806 TTGCCATTTTCTCAAGGTGATCTCTTACCTCCAACGCAAGTAGCAGCAGCTTCTGGGAGC 1865
Query 1220 TCAAGTTCGGATCTTGTTGGATGCGAGACAGATAATGGAGAGTGTTTGGATCCAATAATG 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1866 TCAAGTTCGGATCTTGTTGGATGCGAGACAGATAATGGAGAGTGTTTGGATCCAATAATG 1925
Query 1280 GCTGTTTTGGATGGCGCACTCGAACTAGAAGCTGATACCTTAAATGAGTTGCTTCCTGAA 1339
||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1926 GCTGTTTTGGACGGCGCAATCGAACTAGAAGCTGATGCCTTAAATGAGTTGCTTCCTGAA 1985
Query 1340 GTCCAAGATTCTTTTTGGGAACAGTTCATTGGTGAGAGCCCAGTGATTGGTGAGACAGAT 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1986 GTCCAAGATTCTTTTTGGGAACAGTTCATTGGTGAGAGCCCAGTGATTGGTGAGACAGAT 2045
Query 1400 GAGTTAATCTCAGGATCAGTGGAAAATGAACTGATATTGGAGCAACTAGAGTTACAATCA 1459
||| ||||||||| |||||||||||||||||||||| ||||||| ||||| |||||||||
Sbjct 2046 GAGCTAATCTCAGTATCAGTGGAAAATGAACTGATAATGGAGCAGCTAGAATTACAATCA 2105
Query 1460 ACCCTGAGTAATGTGTGGAGCAAGAATCAACAAATGAACCATCTTACTGAACAGATGGGA 1519
|||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2106 GGCCTGGGTAGTGTGTGGAGCAAGAACCAACAAATGAACCATCTTACTGAACAGATGGGA 2165
Query 1520 CTTCTCACATCAGATGCTCTCAGAAAATGAGAT 1552
|||||||||||||||||||||||||||||||||
Sbjct 2166 CTTCTCACATCAGATGCTCTCAGAAAATGAGAT 2198
> Ahg488541 jgi|Araly1|488541|fgenesh2_kg.6__1675__AT5G16820.1
Length=1786
Score = 656 bits (355), Expect = 0.0
Identities = 738/918 (80%), Gaps = 45/918 (5%)
Strand=Plus/Plus
Query 195 TGAGCTCCATTCCGCCTTTTC-TGAGCAAAACGTACGATATGGTTGACGATCCATTGACG 253
||| |||| | ||||| |||| |||||||||| ||||| |||||||| ||||| |||||
Sbjct 210 TGAACTCCGTGCCGCC-TTTCTTGAGCAAAACCTACGACATGGTTGATGATCCGTTGACC 268
Query 254 GACGACGTGGTGTCTTGGAGCAGCGGAAACAACAGCTTCGTGGTTTGGAACGTGCCTGAG 313
| || || ||||||||||||||||| |||||||||||||| || |||| || || |||
Sbjct 269 AATGAGGTCGTGTCTTGGAGCAGCGGGAACAACAGCTTCGTCGTCTGGAGTGTCCCCGAG 328
Query 314 TTCGCCAAACAGT-TTC-TACCAAAGTATTTCAAGCACAACAATTTCTCCAGCTTCGTCA 371
||| | || || || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 329 TTC-TCGAA-GGTGCTCTTACCCAAGTATTTCAAGCACAACAATTTCTCCAGCTTCGTCA 386
Query 372 GACAGCTCAATACTTATGGTTTTAGAAAAGTTGATCCAGACCGCTGGGAGTTTGCAAACG 431
||||| | |||||||||||||| ||||||||||||||||| || ||||| |||||||| |
Sbjct 387 GACAGTTAAATACTTATGGTTTCAGAAAAGTTGATCCAGATCGATGGGAATTTGCAAATG 446
Query 432 AGGGCTTT-TTAAGAGGCCAAAAGCAAATACTAAAGAGTATTGTCCGGCGAAAACCTGCA 490
|||| ||| ||| |||||||||| ||| |||| ||||||||||| || |||||||| |
Sbjct 447 AGGGATTTCTTA-GAGGCCAAAAACAACTACTCAAGAGTATTGTTAGGAGAAAACCTTCG 505
Query 491 CAAGTGCAGCC---TCCA-CAACAACCTCAAGTTCAGCA-CTCATCTGTGGGTGCGTGCG 545
|| ||||||| || | |||||| ||||||||||| | ||||||||| ||||| || |
Sbjct 506 CATGTGCAGCAGAATC-AGCAACAAACTCAAGTTCAG-AGCTCATCTGTTGGTGCTTGTG 563
Query 546 TTGAAGTGGGCAAATTTGGACTCGAAGAGGAAGTGGAAAGACTTCAGCGCGATAAGAACG 605
| || ||||| || |||||| | ||||| |||||||| |||||| |||| |||||||| |
Sbjct 564 TCGAGGTGGGGAAGTTTGGAATAGAAGAAGAAGTGGATAGACTTAAGCGGGATAAGAATG 623
Query 606 TCCTTATGCAGGAACTTGTAAGGTTGAGGCAGCAACAACAAGTTACCGAACATCATCTGC 665
| |||||||| ||||| || ||||| ||||||||||| |||| ||||||| | || ||||
Sbjct 624 TTCTTATGCAAGAACTCGTCAGGTTAAGGCAGCAACAGCAAGCTACCGAAAACCAACTGC 683
Query 666 AGAATGTGGGGCAGAAAGTTCATGTGATGGAGCAGAGGCAGCAACAGATGATGTCCTTTC 725
|||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||| |||
Sbjct 684 AGAATGTGGGACAGAAAGTTCAGGTGATGGAGCAGAGGCAACAACAAATGATGTCGTTTT 743
Query 726 TAGCAAAGGCTGTCCAAAGTCCAGGTTTCTTAAACCAATTT-TCTCAGCAGAGTAATGAA 784
||||||||||||| ||||||||||||||||||||||| || | || |||| ||||||
Sbjct 744 TAGCAAAGGCTGTTCAAAGTCCAGGTTTCTTAAACCAGTTAGTA-CAACAGAATAATGAT 802
Query 785 G-CAAACCA-ACACATTTCTGAAAGCAACAAAAAGAGGAGGCTACCTGTTGAGGACCAG- 841
| ||| | | ||| ||| | | |||||||||||||||||| || |||||||| || |||
Sbjct 803 GGCAA-C-AGACAAATTCCAGGAAGCAACAAAAAGAGGAGACTTCCTGTTGATGAACAGG 860
Query 842 ATGAATTCTGGCAGTC-ATGGGGTTAATGGTCTTAGCCGCCAGATTGTGAGATATCAGTC 900
| ||| | ||| | | ||| || ||||||||||| ||| |||||||| ||||||||| |
Sbjct 861 A-GAACTGTGGG-GACCATGTGGCTAATGGTCTTAACCGTCAGATTGTTAGATATCAGCC 918
Query 901 ATCGATGAACGATGCAACA-AACACTATGCTTCA-ACAGATACAGCAG-A-TGAGTAA-T 955
||||| ||||| ||| | || ||||||||| | |||| | | | | | |||| |
Sbjct 919 GTCGATAAACGAAGCAGCCCAA-ACTATGCTT-AGACAGTT-CTTAAATACT-AGTACCT 974
Query 956 GCACCTAGCCATGAATCTCTCTCAAGCAATAATGGTAGCTTTCTT-TTGGGCGATGTTCC 1014
||||| | ||||||| | |||| |||| || || |||| | ||||| ||||||||
Sbjct 975 -CACCTCGGTATGAATCAGTTTCAAACAATCCTGACAG-TTTCCTATTGGGTGATGTTCC 1032
Query 1015 AAATTCTAACAT-T-TCAGACAATGGGAGCTCCT-CAAATGGA-TCACCTGAAGTTACAT 1070
| ||||||| | | | ||||||||||| | | | ||||| || | | || ||| |||
Sbjct 1033 CAGTTCTAAC-TCTGT-AGACAATGGGAAC-CTTTCAAATAGAGTTTC-TGGAGTAACAC 1088
Query 1071 TGGCAGATGTTTCATCCA 1088
|||| || |||||| |||
Sbjct 1089 TGGCCGAGGTTTCACCCA 1106
> Ahg939759 jgi|Araly1|939759|scaffold_600303.1
Length=1284
Score = 115 bits (62), Expect = 1e-24
Identities = 143/179 (80%), Gaps = 18/179 (10%)
Strand=Plus/Plus
Query 287 AGCTTCGTGGTTT-GGAACGTGCCT-GAGTTCGCCA-AA-CAGTTTCTACCAAAGTATTT 342
|||||||| |||| ||| | | || |||||||||| || || | || ||| | ||||
Sbjct 252 AGCTTCGTTGTTTGGGATCCT--CTAGAGTTCGCCAGAATCA--TACTTCCACGGAATTT 307
Query 343 CAAGCACAACAATTTCTCCAGCTTCGTCAGACAGCTCAATACTTATGGTTTTAGAAA-AG 401
||| |||||||||||||||||||||||||||||||| || |||||||| ||| |||| |
Sbjct 308 CAAACACAACAATTTCTCCAGCTTCGTCAGACAGCTTAACACTTATGGATTTCGAAAGA- 366
Query 402 TTGATCCAGACC-GCTGGGAGTTTGCAAACGAGGGCTTT--TTAAGAGGCCAA-AAGCA 456
||||| | ||| | ||||| ||||| ||||||| |||| ||| ||||| || |||||
Sbjct 367 TTGATACTGACAAG-TGGGAATTTGCTAACGAGG-CTTTCCTTA-GAGGC-AAGAAGCA 421
> Ahg927795 jgi|Araly1|927795|scaffold_300252.1
Length=427
Score = 58.4 bits (31), Expect = 2e-07
Identities = 31/31 (100%), Gaps = 0/31 (0%)
Strand=Plus/Plus
Query 1604 CGCAACAACAAAAAGAATATGACCAAAGGAG 1634
|||||||||||||||||||||||||||||||
Sbjct 3 CGCAACAACAAAAAGAATATGACCAAAGGAG 33
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70009870310
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5