BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G03070.1 Length=714 Score E Sequences producing significant alignments: (Bits) Value Ahg927805 jgi|Araly1|927805|scaffold_300262.1 584 3e-166 > Ahg927805 jgi|Araly1|927805|scaffold_300262.1 Length=373 Score = 584 bits (316), Expect = 3e-166 Identities = 350/367 (95%), Gaps = 0/367 (0%) Strand=Plus/Plus Query 70 TTTCTCGTTGTTGGAACAATGGCGTCGAATCTCCTGAAAGCCCTAATCCGATCTCAGATT 129 ||||||| ||||||| |||||||||| |||||||||||||||||||||||||| |||||| Sbjct 3 TTTCTCGGTGTTGGAGCAATGGCGTCAAATCTCCTGAAAGCCCTAATCCGATCGCAGATT 62 Query 130 CTTCCATCTTCCAGGAGGAATTTCAGTGTGGCGACCACACAGCTTGGCATTCCAACAGAC 189 ||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct 63 CTTCCATCTTCGAGGAGGAATTTTAGTGTGGCGACCACACAACTCGGCATTCCAACAGAC 122 Query 190 GATCTAGTCGGCAATCACACCGCCAAATGGATGCAGGATAGAAGCAAGAAATCACCTATG 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 GATCTAGTCGGCAATCACACCGCCAAATGGATGCAGGATAGAAGCAAGAAATCACCTATG 182 Query 250 GAACTGATTAGTGAGGTTCCACCTATCAAAGTTGATGGAAGGATTGTTGCTTGTGAAGGA 309 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 183 GAACTGATCAGTGAGGTTCCACCTATCAAAGTTGATGGAAGGATTGCTGCTTGTGAAGGA 242 Query 310 GACACCAATCCGGCCCTAGGTCATCCAATCGAGTTCATATGCCTCGACCTAAATGAGCCT 369 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 243 GACACCAATCCGGCCCTGGGTCATCCAATCGAGTTCATATGCCTCGACCTAGATGAGCCT 302 Query 370 GCGATCTGCAAGTACTGCGGCCTTCGTTATGTTCAAGATCATCACCATTGAGGCAAATTC 429 |||||||||||||||||||||||||| |||||||||||||||||||| | || ||||||| Sbjct 303 GCGATCTGCAAGTACTGCGGCCTTCGCTATGTTCAAGATCATCACCACTAAGCCAAATTC 362 Query 430 TGAAAGT 436 |||||| Sbjct 363 CGAAAGT 369 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26266689813 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5