BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G06010.1 Length=3710 Score E Sequences producing significant alignments: (Bits) Value Ahg903463 jgi|Araly1|903463|Al_scaffold_0003_591 4571 0.0 Ahg488814 jgi|Araly1|488814|fgenesh2_kg.6__1948__AT5G19310.1 2747 0.0 > Ahg903463 jgi|Araly1|903463|Al_scaffold_0003_591 Length=3393 Score = 4571 bits (2475), Expect = 0.0 Identities = 2620/2690 (97%), Gaps = 9/2690 (0%) Strand=Plus/Plus Query 817 AGAGGTTATCACGTTTAGAAGAAGAGGAGAAGAATCTGATTGAAACTGCCAAGAGGAAAT 876 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 710 AGAGGTTATCACGTTTAGAAGAAGAGGAGAAGAATCTGATTGAAACCGCCAAGAGGAAAT 769 Query 877 TCTTTGCAGAAGTACTCAATGCAGTACGTGAATTCCAGTTGCAAATTCAGGCGACTCAAA 936 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 770 TCTTTGCAGAAGTACTTAATGCAGTTCGTGAATTCCAGTTGCAAATTCAGGCGACTCAAA 829 Query 937 AACGCCGTAGGCAAAGGAATGATGGTGTGCAGGCTTGGCATGGGAGACAAAGACAACGCG 996 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 830 AACGCCGTAGGCAAAGGAATGATGGTGTGCAGGCTTGGCATGGGAGACAAAGACAACGTG 889 Query 997 CTACCCGTGCTGAAAAGTTGAGGCTCATGGCCCTTAAGTCCGATGATCAAGAGGCATACA 1056 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 890 CTACCCGTGCTGAAAAGTTGAGGCTCATGGCCCTTAAGTCTGATGATCAAGAGGCATACA 949 Query 1057 TGAAACTAGTAAAGGAGAGTAAAAATGAAAGACTAACCACTCTTTTAGAGGAGACAAACA 1116 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 950 TGAAACTAGTAAAGGAGAGTAAAAATGAAAGACTAACCACTCTTTTAGAGGAGACAAACA 1009 Query 1117 AACTCCTTGCTAATTTGGGAGCTGCTGTTCAACGTCAGAAAGATGCTAAACTTCCGGAAG 1176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1010 AACTCCTTGCTAATTTGGGAGCTGCTGTTCAACGTCAGAAAGATGCTAAACTTCCGGAAG 1069 Query 1177 GCATTGATCTACTTAAAGACTCAGAATCTGACTTGTCTGAACTTGATGCTCCAAGAAGTG 1236 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1070 GCATTGATCTTCTTAAAGACTCAGAATCTGACTTGTCTGAACTTGATGGTCCAAGAAGTG 1129 Query 1237 AACCATTGCAGGATCTGCTTCCTGATCAGGATATAGATATTACTGAGTCTGACAATAACG 1296 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1130 AACCATTGCAGGATCTGCTTCCTGATCAGGATATTGATATTACTGAGTCTGACAATAACG 1189 Query 1297 ATGACTCTAATGATTTACTAGAAGGACAGAGGCAGTATAACTCGGCTATCCATTCAATAC 1356 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1190 ATGACTCTAATGATTTACTAGAAGGACAGAGGCAGTATAACTCTGCTATCCATTCAATAC 1249 Query 1357 AAGAGAAGGTGACGGAGCAGCCCTCGCTTCTAGAAGGTGGGGAACTACGATCCTATCAAT 1416 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1250 AAGAGAAGGTGACGGAGCAGCCCTCACTTCTAGAAGGTGGGGAACTACGATCCTATCAAT 1309 Query 1417 TAGAAGGGCTTCAATGGATGGTTTCTCTATTCAACAATAACCTCAATGGAATATTAGCTG 1476 |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1310 TAGAAGGGCTCCAATGGATGGTTTCTCTATTCAACAATAACCTCAATGGAATTTTAGCTG 1369 Query 1477 ATGAGATGGGTTTGGGAAAAACTATTCAAACAATTTCTCTGATTGCGTATCTTCTGGAGA 1536 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1370 ACGAGATGGGTTTGGGAAAAACTATTCAAACTATTTCTCTGATTGCGTATCTTCTGGAGA 1429 Query 1537 ATAAAGGTGTGCCTGGGCCTTATCTTATAGTTGCTCCAAAAGCTGTGCTACCAAATTGGG 1596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1430 ATAAAGGTGTGCCTGGGCCTTATCTTATAGTTGCTCCAAAAGCTGTGCTACCAAATTGGG 1489 Query 1597 TAAACGAGTTTGCAACATGGGTACCAAGCATTGCAGCTTTTCTGTATGATGGACGTTTAG 1656 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1490 TAAACGAGTTTGCAACATGGGTACCAAGCATTGCAGCTTTTCTTTATGATGGACGTTTAG 1549 Query 1657 AGGAAAGGAAAGCAATAAGGGAAAAAATTGCAGGAGAAGGAAAATTTAATGTGTTGATAA 1716 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1550 AGGAAAGAAAAGCAATAAGGGAAAAAATTGCAGGAGAAGGAAAATTTAATGTGTTGATAA 1609 Query 1717 CCCATTATGATCTTATCATGAGAGATAAAGCATTTTTAAAGAAAATTGAGTGGTACTACA 1776 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1610 CCCATTATGATCTTATCATGAGAGATAAAGCATTTTTGAAGAAAATTGAGTGGTACTACA 1669 Query 1777 TGATTGTTGATGAAGGACATCGGCTGAAGAACCACGAATCTGCTCTAGCAAAGACTTTAT 1836 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 1670 TGATTGTTGATGAAGGACATCGGCTGAAGAACCATGAATCTGCTCTAGCAAAGACTCTAG 1729 Query 1837 TAACAGGCTATCGTATAAAACGCAGACTTCTGTTGACCGGGACACCCATACAGAATAGCC 1896 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1730 TAACAGGCTATCGTATAAAACGCAGACTTCTGTTAACCGGGACACCCATACAGAATAGCC 1789 Query 1897 TTCAAGAACTATGGTCATTGCTTAATTTTCTCCTTCCTCACATCTTTAACTCGGTTCAGA 1956 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1790 TTCAAGAACTATGGTCATTGCTTAATTTTCTCCTTCCTCACATCTTTAACTCAGTTCAAA 1849 Query 1957 ACTTCGAGGAATGGTTTAATGCTCCTTTCGCTGACCGTGGTAATGTCAGTCTCACGGATG 2016 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1850 ACTTCGAGGAATGGTTTAATGCGCCTTTCGCTGACCGTGGTAATGTCAGTCTTACGGATG 1909 Query 2017 AAGAGGAGCTCTTGATTATTCACCGCCTGCATCATGTTATAAGGCCGTTTATACTGAGAA 2076 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 1910 AAGAGGAGCTCTTGATTATCCACCGTCTGCATCATGTTATAAGGCCGTTTATACTGAGAA 1969 Query 2077 GGAAAAAGGACGAAGTAGAGAAATTCCTTCCTGGAAAGACACAGGTCATATTGAAGTGTG 2136 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1970 GAAAAAAGGACGAAGTAGAGAAATTCCTTCCTGGAAAGACACAGGTCATATTGAAGTGTG 2029 Query 2137 ATATGTCGGCGTGGCAGAAAGTGTATTACAAACAAGTTACAGACATGGGCAGGGTTGGCC 2196 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2030 ATATGTCGGCATGGCAGAAAGTGTATTACAAACAAGTTACAGACATGGGCAGGGTTGGCC 2089 Query 2197 TTCAAACAGGATCTGGGAAATCAAAGAGTCTGCAAAATCTAACGATGCAATTAAGAAAGT 2256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2090 TTCAAACAGGATCTGGGAAATCAAAGAGTCTGCAAAATCTAACGATGCAATTAAGAAAGT 2149 Query 2257 GTTGTAACCATCCTTATCTATTTGTTGGAGGAGACTACAATATGTGGAAGAAACCTGAGA 2316 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2150 GTTGTAACCATCCCTATCTATTTGTTGGAGGAGACTACAATATGTGGAAGAAACCTGAGA 2209 Query 2317 TTGTGAGAGCTTCAGGGAAATTTGAACTCCTTGATCGTCTCCTTCCAAAACTGCGCAAGG 2376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2210 TTGTGAGAGCTTCAGGGAAATTTGAACTCCTTGATCGTCTCCTTCCAAAACTGCGCAAGG 2269 Query 2377 CTGGACATAGGATTCTTCTCTTCTCCCAAATGACCCGTCTCATTGACGTTCTTGAGATAT 2436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2270 CTGGACATAGGATTCTTCTCTTCTCCCAAATGACCCGTCTCATTGACGTTCTTGAGATAT 2329 Query 2437 ACTTGACACTTAATGATTACAAATACCTTAGACTCGATGGTACCACAAAGACAGATCAAA 2496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2330 ACTTGACACTTAATGATTACAAATACCTTAGACTCGATGGTACCACAAAGACAGATCAAA 2389 Query 2497 GAGGGCTTTTACTGAAGCAATTCAACGAGCCAGATTCTCCCTACTTTATGTTTCTTTTGA 2556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2390 GAGGGCTTTTACTGAAGCAATTCAACGAGCCAGATTCTCCCTACTTTATGTTTCTTTTGA 2449 Query 2557 GCACGCGTGCTGGAGGTCTCGGTTTGAACTTGCAAACTGCAGACACTGTTATTATCTTTG 2616 |||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2450 GCACACGTGCCGGAGGTCTTGGTTTGAACTTGCAAACTGCAGACACTGTTATTATCTTTG 2509 Query 2617 ACAGTGATTGGAACCCACAAATGGACCAACAGGCCGAGGATCGAGCTCATCGCATAGGGC 2676 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2510 ACAGTGATTGGAACCCACAAATGGACCAACAGGCCGAGGATCGAGCGCATCGCATAGGGC 2569 Query 2677 AGAAGAAGGAAGTCAGAGTGTTTGTTTTGGTTAGCGTTGGCTCTGTTGAAGAAGTAATAT 2736 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2570 AGAAGAAGGAAGTCAGAGTGTTTGTTTTGGTTAGCGTTGGCTCCATTGAAGAAGTAATAT 2629 Query 2737 TGGAGCGTGCAAAGCAAAAGATGGGCATTGACGCCAAAGTCATACAAGCTGGACTTTTCA 2796 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2630 TGGAGCGTGCAAAGCAAAAGATGGGCATTGACGCCAAAGTCATACAAGCTGGACTTTTCA 2689 Query 2797 ACACAACTTCCACTGCACAAGACAGAAGAGAGATGCTTGAAGAGATTATGCGTAAAGGAA 2856 ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct 2690 ACACAACTTCCACTGCACAAGACCGAAGAGAGATGCTTGAAGAGATTATGCGCAAAGGAA 2749 Query 2857 CAAGCTCGCTCGGGACAGATGTCCCCAGTGAGAGAGAAATAAACCGGCTAGCGGCTCGTA 2916 |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 2750 CAAGCTCGCTTGGGACAGATGTCCCCAGTGAGAGAGAAATAAATCGGCTCGCGGCTCGTA 2809 Query 2917 GTGAGGATGAATTTTGGATGTTTGAGCGAATGGATGAGGAGAGACGAAGGAAGGAGAATT 2976 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2810 GTGAGGATGAATTTTGGATGTTTGAGCGAATGGATGAGGAGAGACGAAGGAAGGAGAATT 2869 Query 2977 ACAGAGCCCGTCTGATGCAAGAGCAAGAAGTCCCTGAGTGGGCGTACACTACTCAGACCC 3036 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 2870 ACAGAGCCCGTCTGATGCAAGAGCAGGAAGTCCCTGAGTGGGCGTACACTACTCAGAGCC 2929 Query 3037 AAGAGGAGAAGTTGAACAACGGAAAGTTCCATTTTGGTAGTGTCACAGGTAAGCGAAAAC 3096 |||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| Sbjct 2930 AAGATGAGAAGTTGAACAGCGGAAAGTTCAATTTTGGGAGTGTCACAGGTAAGCGAAAAC 2989 Query 3097 GTAAAGAGATTGTTTACAGCGACACACTAAGCGAGTTACAGTGGCTGAAAGCCGTGGAGA 3156 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2990 GTAAAGAGATCGTTTACAGTGACACACTAAGCGAGTTACAGTGGCTGAAAGCCGTGGAGA 3049 Query 3157 GCGGTGAAGACCTGTCAAAACTCTCAATGAGATATAATAGGAGAGAGGAGAACGCAAGCA 3216 ||||||||||||||||||||||||| |||||| ||| |||||||||||||| |||||| Sbjct 3050 GCGGTGAAGACCTGTCAAAACTCTCTATGAGACATA---GGAGAGAGGAGAACACAAGCA 3106 Query 3217 ACACAAAGACATCAACGAGCAAAAAAGTGATAGAATCTATCCAAACTGTGAGTGATGGGA 3276 ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 3107 ACACAAAGACACCAACGAGTAAAAAAGCGATAGAATCTATCCAAACTGTGAGTGATGGGA 3166 Query 3277 Cgagcgaggaggatgaagaagagcaagaagaagaa-a--gagcgaaggagatgagtggaa 3333 ||||||||||||| ||||||||| ||||||||||| | |||| |||||||||||||||| Sbjct 3167 CGAGCGAGGAGGAGGAAGAAGAGGAAGAAGAAGAAGATAGAGCAAAGGAGATGAGTGGAA 3226 Query 3334 aacagagagtggacaagtctgaagaggaagaagaagaaggtgaagaagagaaTGATGGAA 3393 ||| ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 3227 AACGGAGAGTGGAGAAGTCTGAAGA--A-GAAGAAGAAGGTGAAGAAGAGAATGATGGAA 3283 Query 3394 AGGCAATATTCAAGTGGAATACTCATAAGAAGAAAAGGTCTAGATACTCTTTTACGTGTT 3453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3284 AGGCAATATTCAAGTGGAATACTCATAAGAAGAAAAGGTCTAGATACTCTTTTACGTGTT 3343 Query 3454 CTTCGTCTGACTCTAGAGCTCAAAGTTCCAATGGAAGTAGACGAAAATGA 3503 ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 3344 CTTCGTCTGACTCTAGAGCTCAAAGTTCCAACGGAAGTAGACGAAAATGA 3393 Score = 547 bits (296), Expect = 2e-154 Identities = 349/373 (94%), Gaps = 9/373 (2%) Strand=Plus/Plus Query 195 ATGGTGGCTCAGCAGCTCCAAGAGAGATGCGGCGGCACTTCTCAAGAAGATCCAGTTGAG 254 ||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||| Sbjct 1 ATGGTGGCTCAGCAGCTTCAAGAGAGAT---GCGGCAATTCTCAAGAAGATCCAGTTGAG 57 Query 255 ACCACCAAGTCTCTGATCTGTGCTCTCAATTACATTTCTCGTGACCTTCCTTTGCCTCCT 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 ACCACCAAGTCTCTGATCTGTGCTCTCAATTACATTTCTCGTGACCTTCCTTTGCCTCCT 117 Query 315 CACCTCTTCACCGCCGTTTCTTCAATCTACCATGGCGcttcttcttcttctctctctGAC 374 ||||||||| |||||||||| || |||||||||||||||||||||||| || || | ||| Sbjct 118 CACCTCTTCGCCGCCGTTTCCTCTATCTACCATGGCGCTTCTTCTTCT-CTTTC-C-GAC 174 Query 375 TCCGATGTCTCTCCGCCGCTACCTACTTCGCCGCCTGCGAATAA---AGCTCCCTATGGA 431 |||||||||||||||||||| |||||||| ||||||| |||||| | ||||||||||| Sbjct 175 TCCGATGTCTCTCCGCCGCTGCCTACTTCCCCGCCTGGGAATAATTTAACTCCCTATGGA 234 Query 432 GCTGATTTGATGGGTGAATTCGAGGATGCACTTTTGAAGCAGAGACCAGATTGTGAATCA 491 | ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 235 GGTGATTTGATGGGTGAGTTCGAGGATGCACTTTTGAAGCAGAGACCAAATTGTGAATCA 294 Query 492 GGCTCTCGATTGATACAATTACTGGATAATCGGAATAAGAGTCATATCCAACGCCGCTTA 551 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 295 GGCTCTCGATTGATAGAATTACTCGATAATCGGAATAAGAGTCATATCCAACGCCGCTTA 354 Query 552 TCTGAACTTGAAG 564 ||||||||||||| Sbjct 355 TCTGAACTTGAAG 367 Score = 440 bits (238), Expect = 3e-122 Identities = 250/256 (98%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 563 AGAATTACCTTCTACTAGAGGTGAAGATTTGCAGGCAAAGTGCTTACTTGAGCTTTATGG 622 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 405 AGAATTACCTTCTACTAGAGGTGAAGACTTGCAGGCAAAATGCTTACTTGAGCTTTATGG 464 Query 623 GCTTAAGCTACGGGAATTGCAAGGCAAGGTTCGAACCGCGGTGAGCTCGGAATTCTGGCT 682 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 465 GCTTAAGCTACGAGAATTGCAAGGCAAGGTTCGAACCGCGGTGAGCTCGGAATTCTGGCT 524 Query 683 ACGTCTGAACTGTGCAGATGTCAGTAGCCAAGTATTTGACTGGGGCATGATGCGGTTGCC 742 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 525 ACGTCTGAACTGTGCAGATGTCAGTAGCCAACTATTTGACTGGGGCATGATGCGGTTGCC 584 Query 743 TCGTCCATTTTATGGGGTTGGAGATCCTTTTGCTATGGAAGCTGATGATCAGTTCAGAAA 802 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 585 TCGTCCATTTTATGGGGCTGGAGATCCTTTTGCTATGGAAGCTGATGATCAGTTCAGAAA 644 Query 803 GAAGCGTGACGCTGAG 818 ||||||||| |||||| Sbjct 645 GAAGCGTGATGCTGAG 660 > Ahg488814 jgi|Araly1|488814|fgenesh2_kg.6__1948__AT5G19310.1 Length=3235 Score = 2747 bits (1487), Expect = 0.0 Identities = 2477/2946 (84%), Gaps = 104/2946 (4%) Strand=Plus/Plus Query 243 GATCCAGTTGAGACCACCAAGTCTCTGATCTGTGCTCTCAATTACATTTCTCGTGACCTT 302 ||||| || |||| |||||||||||||||| |||||| || ||| ||||||| |||||| Sbjct 80 GATCCTGTAGAGAAGACCAAGTCTCTGATCTCTGCTCTTAACTACGTTTCTCGCGACCTT 139 Query 303 CCT-TTGCCTCCTCACCTCTTCAC-C-GCCGTTTCTTCAATCTACCATGGCGcttcttct 359 || |||||| ||||||| || || | |||||||||| ||||||||| | || || | Sbjct 140 -CTCTTGCCTTCTCACCT-TT-ACGCTTCCGTTTCTTCCATCTACCAT-G-GC-TC--CG 191 Query 360 tcttctctctctGACTCCGATGTCTCTCCGCCGCTACCTACTTCGCCGCCTGCGAATAAA 419 ||| | ||||| |||| || ||||| | || || | | | | | | | Sbjct 192 TCTCCGATCTCT--CTCC----TC-CTCCG-C-CT--CTTCGT-G-AAAAT-TG-TTTTA 236 Query 420 GCTCCCTATGGAGCTGATTTGATGGGTGAATTCGAGGATGCACTTTTGAAGCAGAGACCA 479 ||||| || ||| |||||||||| | || ||||| |||||||||||||||||| ||| | Sbjct 237 -CTCCCAATAGAGGTGATTTGATGAGCGAGTTCGAAGATGCACTTTTGAAGCAGCGACTA 295 Query 480 GATTGTGAATCAGGCTCTCGA-TTGATACAA-TTACTGGATAA-TCGGAATAAGAGTCAT 536 | |||||||||||||||||| ||| ||| ||| ||| || ||| ||||||||| | Sbjct 296 AACTGTGAATCAGGCTCTCGACTTG-CCCAATTTA-AGGA-AACTCGCTATAAGAGTCGT 352 Query 537 ATCCA-ACGCCGCTTATCTGAACTTGAAGAATTACCTTCTACTAGAGGTGAAGATTTGCA 595 |||| | || |||||||||||||||| ||||||||| | |||||||||||||||||| Sbjct 353 TTCCAGA-ATCGATTATCTGAACTTGAAGGATTACCTTCCAATAGAGGTGAAGATTTGCA 411 Query 596 GGCAAAGTGCTTACTTGAGCTTTATGGGCTTAAGCTACGGGAATTGCAAGGCAAGGTTCG 655 || ||| |||||||||||||||||||||||||||||| ||| | ||| |||||||||| Sbjct 412 GGAAAAATGCTTACTTGAGCTTTATGGGCTTAAGCTAAAAGAACTACAATGCAAGGTTCG 471 Query 656 AACCGCGGTGAGCTCGGAATTCTGGCTACGTCTGAACTGTGCAGATGTCAG-TAGCCAAG 714 | | ||||||| |||||| |||||| ||| |||| |||||| || | | |||||| Sbjct 472 GGCTGAGGTGAGCGCGGAATACTGGCTGCGTTTGAATTGTGCACAT-CCTGAAAGCCAAC 530 Query 715 TATTTGACTGGGGCATGATGCGGTTGCCTCGTCC-ATTTTATGGGGTTGGAGATCCTTTT 773 ||| ||||||||||||||||||||||||||| || | | ||||||||||||||||||||| Sbjct 531 TATATGACTGGGGCATGATGCGGTTGCCTCG-CCGAATGTATGGGGTTGGAGATCCTTTT 589 Query 774 GC-TATGGAAGCTGATGATCAGTTCAGAAAGAAGCGTGACGCTGAGAGGTTATCACGTTT 832 | ||||||||||||||||||||||||||| |||||||| || |||||||||| ||| || Sbjct 590 -CATATGGAAGCTGATGATCAGTTCAGAAACAAGCGTGATGCCGAGAGGTTATTACGGTT 648 Query 833 AGAAGAAGAGGAGAAGAATCTGATTGAAACTGCCA-AGAGGAAATTCTTTGCAGAAGTAC 891 |||||| |||||||||||||| |||||||| | || |||||||||||||||||||| ||| Sbjct 649 AGAAGAGGAGGAGAAGAATCTCATTGAAAC-GACACAGAGGAAATTCTTTGCAGAAATAC 707 Query 892 TCAATGCAGTACGTGAATTCCAGTTGCAAATTCAGGCGACTCAAAAACGCCGTAGGCAAA 951 ||||||| || |||||||||||||| ||||||||||||||||| | |||| ||| ||||| Sbjct 708 TCAATGCTGTTCGTGAATTCCAGTTACAAATTCAGGCGACTCATAGACGCTGTAAGCAAA 767 Query 952 GGAATGATGGTGTGCAGGCTTGGCATGGGAGA-CAAAGACAACGCGCTACCCGTGCTGAA 1010 | ||||||||||| ||||| |||||| ||| | ||||| ||||| || ||||| |||||| Sbjct 768 GAAATGATGGTGTCCAGGCCTGGCAT-GGAAAGCAAAGGCAACGTGCCACCCGAGCTGAA 826 Query 1011 AAGTTGAGGCTCATGGCCCTTAAGTCCGATGATCAAGAGGCATACATGAAACTAGTAAAG 1070 || | ||| ||||||||||||| || ||||||||||||| |||||||||||||| |||| Sbjct 827 AAACTAAGGATCATGGCCCTTAAATCTGATGATCAAGAGGAATACATGAAACTAGCAAAG 886 Query 1071 GAGAGTAAAAATGAAAGACTAACCACTCTTT--TAGAGGAGACAAACAAACTCCTTGCTA 1128 ||||||||||| |||| ||||| | || ||| ||||||||||||||||| || ||| || Sbjct 887 GAGAGTAAAAACGAAAAACTAA-CTCT-TTTCCTAGAGGAGACAAACAAAATCTTTGTTA 944 Query 1129 ATTTGGGAGCTGCTGTTCAACGTCAGAAAGATGCTAAACTTCCGGAAGGCATTGATCTAC 1188 |||||||||||| || || |||||||||||||| |||||| | ||| ||| | |||| Sbjct 945 GTTTGGGAGCTGCAGTCCAGCGTCAGAAAGATGCCAAACTTTCAGAAAACATCAAACTAC 1004 Query 1189 TTAAAGACTCAGAATCTGACTTGTCTGAACTTGATGCTCCAAGAAGTGAACCATTGCAGG 1248 | |||| ||||||||||||||| ||||| |||||||| | ||| | || Sbjct 1005 TGAAAGGCTCAGAATCTGACTTATCTGATGTTGATGCT-C----------CCA---C-GG 1049 Query 1249 ATCTGCTTCCTGATCAGGATATAGATATTACTGAGTCTGACAATAACGATGACTCTAATG 1308 || |||||||||| || ||||| | || | ||| ||||||||||| ||||| ||||||| Sbjct 1050 ATGTGCTTCCTGACCAAGATATTGGGATCATTGACTCTGACAATAATGATGATTCTAATG 1109 Query 1309 ATTTACTAGAAGGAC-AGAGGCAGTATAACTCGGCTATCCATTCAATACAAGAGAAGGTG 1367 | ||||||||||| | ||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 1110 ACTTACTAGAAGG-CGAGAGGCAGTATAACTTGGCTATTCATTCAATACAAGAGAAGGTG 1168 Query 1368 ACGGAGCAGCCCTCGCTTCTAGAAGGTGGGGAACTACGATCCTATCAATTAGAAGGGCTT 1427 || ||||||| || |||||| |||||||||||||| ||||||| ||||||||||||||| Sbjct 1169 ACAAAGCAGCCATCCCTTCTACAAGGTGGGGAACTAAGATCCTACCAATTAGAAGGGCTT 1228 Query 1428 CAATGGATGGTTTCTCTATTCAACAATAACCT-CAATGGAATATTAGCTGATGAGATGGG 1486 ||||||||||| ||||||| |||||| | || ||||| || ||||||||||| ||||| Sbjct 1229 CAATGGATGGTCTCTCTATACAACAACGA-CTATAATGGCATTTTAGCTGATGAAATGGG 1287 Query 1487 TTTGGGAAAAACTATTCAAACAATTTCTCTGATTGCGTATCTTCTGGAGAA-TAAAGGTG 1545 ||||||||| ||||| ||||||||| | ||||||||||||||||| || || |||| || Sbjct 1288 TTTGGGAAAGACTATCCAAACAATTGCACTGATTGCGTATCTTCTTGA-AAGTAAAAATG 1346 Query 1546 TGCCTGGGCCTTATCTTATAGTTGCTCCAAAAGCTGTGCTACCAAATTGGGTAAACGAGT 1605 ||| ||||||| |||| ||||| |||||||||||||||||||||||||||| ||| |||| Sbjct 1347 TGCATGGGCCTCATCTAATAGTGGCTCCAAAAGCTGTGCTACCAAATTGGGAAAATGAGT 1406 Query 1606 TTGCAACATGGGTACCAAGCATTGCAGCTTTTCTGTATGATGGACGTTTAGA-G-GAAAG 1663 |||||||||||| ||| |||||| | |||||||| || |||||| | | | | |||| Sbjct 1407 TTGCAACATGGGCACCCAGCATTTCCGCTTTTCTTTACGATGGA---TCAAAGGAGAAAA 1463 Query 1664 GAA-AGCAATAAGGGAAAAAATTGCAGGAGAAGGAAAATTTAATGTGTTGATAACCCATT 1722 ||| | |||||| | | ||| ||| | | ||||||||||| || ||||||||||| | Sbjct 1464 GAACTGAAATAAGAGCCAGAATAGCA-G-G-AGGAAAATTTAGCGTATTGATAACCCACT 1520 Query 1723 ATGATCTTATCATGAGAGATAAAGCATTTTTAAAGAAAATTGAGTGGTACTACATGATTG 1782 | ||||||||||||||||||||||||||||| ||||||||||| ||| | |||||||||| Sbjct 1521 ACGATCTTATCATGAGAGATAAAGCATTTTTGAAGAAAATTGACTGGAATTACATGATTG 1580 Query 1783 TTGATGAAGGACATCGGCTGAAGAACCACGAATCTGCTCTAGCAAAGACTTTATTAACAG 1842 |||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| | Sbjct 1581 TTGATGAAGGACATCGGCTGAAGAACCATGAATCTGCTCTAGCAAAGACTCTAGGAACTG 1640 Query 1843 GCTATCGTATAAAACGCAGACTTCTGTTGACCGGGACACCCATACAGAATAGCCTTCAAG 1902 |||| ||||| || ||||||||||| || || ||||| ||||||||||| || || |||| Sbjct 1641 GCTACCGTATTAAGCGCAGACTTCTATTAACTGGGACTCCCATACAGAACAGTCTGCAAG 1700 Query 1903 AACTATGGTCATTGCTTAATTTTCTCCTTCCTCACATCTTTAACTCGGTTCAGAACTTCG 1962 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 1701 AACTATGGTCGCTGCTTAATTTTCTCCTTCCTCACATCTTTAACTCGATTCAGAATTTCG 1760 Query 1963 AGGAATGGTTTAATGCTCCTTTCGCTGACCGTGGTAATGTCAGTCTCACGGATGAAGAGG 2022 | |||||||||||| |||||||||| || ||||| | || |||||| || |||||||||| Sbjct 1761 AAGAATGGTTTAATACTCCTTTCGCAGAACGTGGCAGTGCCAGTCTTACAGATGAAGAGG 1820 Query 2023 AGCTCTTGATTATTCACCGCCTGCATCATGTTATAAGGCCGTTTATACTGAGAAGGAAAA 2082 |||| ||||||||| | || ||||||||||| || ||||||||| ||||||||||||||| Sbjct 1821 AGCTGTTGATTATTAATCGTCTGCATCATGTCATCAGGCCGTTTCTACTGAGAAGGAAAA 1880 Query 2083 AG-GACGAAGTAGAGAAATTCCTTCCTGGAAAGACACAGGTCATATTGAAGTGTGATATG 2141 | | ||||| |||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct 1881 AAAGT-GAAGTTGAGAAATTCCTTCCTGGAAAGACACAAGTCATACTGAAGTGTGATATG 1939 Query 2142 TCGGCGTGGCAGAAAGTGTATTACAAACAAGTTACAGACATGGGCAGGGTTGGCCTTCAA 2201 ||||| ||||| ||| |||||||||||||||||||||| | ||||||||||| ||||| Sbjct 1940 TCGGCTTGGCAAAAATTGTATTACAAACAAGTTACAGATGTAGGCAGGGTTGGTCTTCAT 1999 Query 2202 ACAGG-ATCTGGGAAATCAAAGAGTCTGCAAAATCTAACGATGCAATTAAGAAAGTGTTG 2260 | || | ||||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct 2000 TCTGGCAA-TGGGAAATCAAAGAGTCTGCAGAATCTGACAATGCAATTAAGAAAGTGTTG 2058 Query 2261 TAACCATCCTTATCTATTTGTTGGAGGAGACTACAATATGTGGAAGAAACCTGAGATTGT 2320 ||||||||| || ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct 2059 TAACCATCCGTACCTATTTGTTGGAGGAGATTATAACATGTGGAAGAAGCCTGAGATTGT 2118 Query 2321 GAGAGCTTCAGGGAAATTTGAACTCCTTGATCGTCTCCTTCCAAAACTGC-GCAAGGCTG 2379 |||||||||||| ||||| || || |||||||| |||||||| |||||| | ||| ||| Sbjct 2119 GAGAGCTTCAGGAAAATTCGAGCTACTTGATCGCCTCCTTCCGAAACTGAAGAAAG-CTG 2177 Query 2380 GACATAGGATTCTTCTCTTCTCCCAAATGACCCGTCTCATTGACGTTCTTGAGATATACT 2439 ||||||| |||||||||||||| |||||||| |||||||| ||| |||| || || |||| Sbjct 2178 GACATAGAATTCTTCTCTTCTCTCAAATGACTCGTCTCATCGACCTTCTCGAAATTTACT 2237 Query 2440 TGACACTTAATGATTACAAATACCTTAGACTCGATGGTACCACAAAGACAGATCAAAGAG 2499 ||||||| ||||| |||| ||||| |||||||| ||||||||||||||||| ||||||| Sbjct 2238 TGACACTCAATGACTACATGTACCTCAGACTCGACGGTACCACAAAGACAGACCAAAGAG 2297 Query 2500 GGCTTTTACTGAAGCAATTCAACGAGCCAGATTCTCCCTACTTTATGTTTCTTTTGAGCA 2559 || ||||||||||||||||||| || || || ||||||||||| |||||||||||||||| Sbjct 2298 GGGTTTTACTGAAGCAATTCAATGAACCGGAGTCTCCCTACTTCATGTTTCTTTTGAGCA 2357 Query 2560 CGCGTGCTGGAGGTCTCGGTTTGAACTTGCAAACTGCAGACACTGTTATTATCTTTGACA 2619 | ||||| || ||||| ||||||||||| ||||| ||||||||| ||||||| ||||||| Sbjct 2358 CACGTGCCGGTGGTCTTGGTTTGAACTTACAAACAGCAGACACTATTATTATATTTGACA 2417 Query 2620 GTGATTGGAACCCACAAATGGACCAACAGGCCGAGGATCGAGCTCATCGCATAGGGCAGA 2679 |||||||||| |||||||||||||| ||||| |||||||| || || || |||||||||| Sbjct 2418 GTGATTGGAATCCACAAATGGACCAGCAGGCGGAGGATCGTGCCCACCGGATAGGGCAGA 2477 Query 2680 AGAAGGAAGTCAGAGTGTTTGTTTTGGTTAGCGTTGGCTCTGTTGAAGAAGTAATATTGG 2739 | |||||||| |||||||||||||||||||| |||||||| ||||||| |||||||||| Sbjct 2478 AAAAGGAAGTGAGAGTGTTTGTTTTGGTTAGTATTGGCTCTATTGAAGAGGTAATATTGG 2537 Query 2740 AGCGTGCAAAGCAAAAGATGGGCATTGACGCCAAAGTCATACAAGCTGGACTTTTCAACA 2799 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct 2538 AGCGTGCAAAGCAAAAGATGGGCATTGATGCCAAAGTCATACAAGCAGGACTCTTCAACA 2597 Query 2800 CAACTTCCACTGCACAAGACAGAAGAGAGATGCTTGAAGAGATTATGCGTAAAGGAACAA 2859 ||||||| ||||| |||||||| ||||||||||| |||||||| ||| | |||||||||| Sbjct 2598 CAACTTCTACTGCTCAAGACAGGAGAGAGATGCTGGAAGAGATCATGAGCAAAGGAACAA 2657 Query 2860 GCTCGCTCGGG-ACAGATGTCCCCAGTGAGAGAGAAATAAACCGGCTAGCGGCTCGTA-G 2917 |||| || ||| | |||||| || ||||||||||| || |||||||| || ||||| | | Sbjct 2658 GCTCACTGGGGGA-AGATGTGCCAAGTGAGAGAGAGATTAACCGGCTCGCAGCTCGAACG 2716 Query 2918 TGAGGATGAATTTTGGATGTTTGAGCGAATGGATGAGGAGAGACG-AAGGAAGGAGAATT 2976 |||||||| |||||||||||||| | |||||| ||||| ||||| || |||||||| | Sbjct 2717 -GAGGATGAGTTTTGGATGTTTGAACAAATGGACGAGGAAAGACGGAAA-AAGGAGAACT 2774 Query 2977 ACAGAGCC-CGTCTGATGCAAGAGCAAG-AAGTCCCTGAGTGGGCGTACACTACTCAGAC 3034 ||| || | ||||| ||| ||||| ||| |||| ||||||||||| |||||| | |||| Sbjct 2775 ACA-AGACACGTCTCATGGAAGAG-AAGGAAGTTCCTGAGTGGGCTTACACTTCAGAGAC 2832 Query 3035 CCAAGAGGAGAAGTTGAACAACGGAAAGTTCCATTTTGGTAGTGTCACAGGTAAGCGAAA 3094 ||||| || ||| ||| | ||| ||||||||| || |||| ||||| || || Sbjct 2833 TCAAGAAGACAAG---AACGATTCAAAAAACCATTTTGGCAGCCTCACGGGTAAACGGAA 2889 Query 3095 ACGTAAAGA-G-ATTGTTTACAGCGACACACTAAGCGAGTTACAGTGGCTGAAAGCCG-T 3151 ||| ||||| | | ||| |||||||| | ||||||| || |||||| ||||||| | | Sbjct 2890 ACGAAAAGAAGCAGTGT--ACAGCGACTCTTTAAGCGATTTGCAGTGGATGAAAGC-GAT 2946 Query 3152 GGAGAG 3157 |||||| Sbjct 2947 GGAGAG 2952 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 140166041359 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5