BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G06150.1 Length=2188 Score E Sequences producing significant alignments: (Bits) Value Ahg477918 jgi|Araly1|477918|fgenesh2_kg.3__619__AT3G06150.1 3070 0.0 Ahg488789 jgi|Araly1|488789|fgenesh2_kg.6__1923__AT5G19060.1 1110 0.0 Ahg926144 jgi|Araly1|926144|scaffold_201705.1 359 5e-98 Ahg944013 jgi|Araly1|944013|scaffold_700242.1 353 3e-96 Ahg937275 jgi|Araly1|937275|scaffold_501466.1 353 3e-96 > Ahg477918 jgi|Araly1|477918|fgenesh2_kg.3__619__AT3G06150.1 Length=2142 Score = 3070 bits (1662), Expect = 0.0 Identities = 1998/2153 (93%), Gaps = 51/2153 (2%) Strand=Plus/Plus Query 45 AAAAATCTAAGACTTTTTAATCCTCCCTTGTCTTCTGGAAA--TCTGGGAGGATTTTAAG 102 ||||||| ||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct 23 AAAAATCAAAGACTTTTTAATCCTCCCTTCTCTTCTGGAAATTTTTGGGAGGATTTTAAG 82 Query 103 GTTCTTCTTGTCCaaaaattaaaaaaaTTGCCAATTGTGGATTGTGTATCATTCATTGTC 162 ||||||||||||||| || |||||||| ||| ||||||||||||| |||||||||||| Sbjct 83 GTTCTTCTTGTCCAAGAA-TAAAAAAACTGCTAATTGTGGATTGTTTATCATTCATTG-- 139 Query 163 ATCATCTAATCTTCTTCTTCTTCTACTTACGAGTTTGGAGAAGTTATCCGCCATTGAAGC 222 || | || | |||||||||||||||||||||| | ||||||| Sbjct 140 ----TC--A------------TC-A--TACGAGTTTGGAGAAGTTATCCATCGTTGAAGC 178 Query 223 ATTTAAAATGCCGGAGAAAGGAATGATTTTCCCGCCGGTACCGAGCCAATTGGTGATTTT 282 ||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |||| Sbjct 179 ATTTAGAATGCCGGAGAAAGGAATGATTTTGCCTCCGGTACCGAGCCAATTGGTGCTTTT 238 Query 283 ACGGCCAAGCCCTCTTCTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTGCTTCCT 342 ||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| Sbjct 239 ACGGCCAAGCCCTCTGCTTCAATGGCGGCTTGGTGCTCTTACTGCACTCGTCTTCTTCCT 298 Query 343 TATGTTAGTCGTTTGGAGTATTGACGGTTGTTCGATTCAAAGCTTCGTTCAGCCATGGAG 402 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 299 CATGTTAGTCGTTTGGAGTATTGACGGTTGTTCGATTCAAAGCTTCGTTGAGCCATGGAG 358 Query 403 ATTCAATGCTTACTCTGTTCGAATCAGTCCTTCTCCGTCGCCGTTT-ATGTCAACGAAAC 461 ||||||||| |||||||||||||||||||||||||||||||| ||| |||||| |||||| Sbjct 359 ATTCAATGCATACTCTGTTCGAATCAGTCCTTCTCCGTCGCC-TTTAATGTCACCGAAAC 417 Query 462 CCAATCTAGTATCAGAGAAACCTCACCGCCAAAATCTCACCTT------GATGATGGCTC 515 ||||||||||||||||||||||||||||||||||||| || || || ||||| || Sbjct 418 CCAATCTAGTATCAGAGAAACCTCACCGCCAAAATCTTACTTTGAAGACGACGATGGTTC 477 Query 516 CACGAAATCTGGTTCCGAAGAAGACGAATCTCACTTCAAACTCGACCCGGGTCCAGTTCG 575 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 478 CACGAAATCTGGTTCCGAAGAAGACGAATCTCACTTCAAACTTGACCCGGGTCCAATTCG 537 Query 576 AGTGGATAACCGCTGGATCT-CAGAAGAATTTCACGGCGAATTTGATGAGAGGTTGGTTG 634 |||||| |||| | || | |||||||||||||| ||||||||||||||| ||||||| Sbjct 538 GGTGGATTGCCGCCGAAT-TGCAGAAGAATTTCACTGCGAATTTGATGAGAAATTGGTTG 596 Query 635 GCTCCGGGAGGAGCGCCGTGTAGAGAAGCGAAGACCGTCGAGATTTCAGTTCCCGGTGTC 694 |||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||| Sbjct 597 GCTCCGGGAGGAGCGCCGTGCAGAGAAGCGAAAACCGTCGAGATTTCAGTTGCCGGCGTC 656 Query 695 GACGGGATTGATTCTGTGGAGTTAACCGCCGGAGAGATTCATGAATTCAAATTTCAAGCC 754 |||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 657 GACGGGATTGATTCGGTTGAGTTAACCGCCGGTGAGATTCATGAATTCAAATTTCAAGCC 716 Query 755 ATAGACGAATCTGGAAAAAACGTTTGCATTGGTGGGGACTATTTCGAGACTGATATATCC 814 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 717 ATAGACGAATCTGGAAAACACGTTTGCATTGGTGGGGACTATTTCGAGACTGATTTATCC 776 Query 815 GGCGAGAACTGGAAATCGAGACCACCGGTGAAAGATTTCGGCAACGGAACTTACTCTTTC 874 |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 777 GGCGAGAATTGGAAATCGAGACCGCCGGTGAAAGATTTCGGTAACGGAACTTACTCTTTC 836 Query 875 TCTTTACAGGTTCATCCTGAGTTCGCCGGAGATT-TCAATCTCACCGTCATTTTACTCTT 933 || ||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| Sbjct 837 TCGTTACAGGTTCATCCTGAGTTCGCCGGAGATTAT-AATCTCACCGTCATTTTGCTCTT 895 Query 934 CCGTCATTACCAAGGTCTTAAGTTTAGTACCTCACGTTTAGGCTTTGACCGAAAGCTTCG 993 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 896 CCGTCATTACCAAGGTCTTAAGTTCAGTACCTCACGTTTAGGCTTTGACCGAAAGCTTCG 955 Query 994 CAATGTTAGATTACGCTTTGTTAAGACGCCTGACGTTACTCTGCCGGAGCTCCGGTCATG 1053 |||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||| Sbjct 956 CAATGTTAGATTACGCTTCGTCAAGAAGCCTGACGTTACTCTGCCGGAGCTCCGGTCATG 1015 Query 1054 TAAAAAATCTGATTTTAACAGAGATGCTTGGTCTGGACGATGGACTAGGCTTGGGAAGAA 1113 ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||| Sbjct 1016 TAAAAAATCTGATTTTAACAGAGCTGCTTGGTCCGGACGGTGGACTAGGCTTGGCAAGAA 1075 Query 1114 TGATGAGTGTCAGATTAGCAATGACGGGCGTTACCGCTGCCTCGCTGCGGATTTCCCTTG 1173 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1076 TGATGAGTGTCAGATCAGCAATGACGGCCGTTACCGCTGCCTCGCTGCGGATTTTCCTTG 1135 Query 1174 CCGGAAACCGTGGTGCGACGGTGCGGTTGGAGCTATAGAGAGTAATGGTTGGGTTTACTC 1233 ||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct 1136 CCGGAAACCGTGGTGCGACGGAGCGGTTGGAGCGATAGAGAGCAATGGGTGGGTTTACTC 1195 Query 1234 TAGCCATTGCTCTTTCAAGCTCTTCTCT-GCGGAAAAGGCTTGGGATTGCTTGAAAGGCA 1292 || |||||||| ||||||||||||||| || || ||||||||||||||||||||| || Sbjct 1196 GAGTCATTGCTCCTTCAAGCTCTTCTCTGGC-GATAAGGCTTGGGATTGCTTGAAAAACA 1254 Query 1293 AATGGATTTTCTTCTGGGGAGATTCGAATCATGTTGATTCGATCAGAAACTTGCTGAATT 1352 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 1255 AATGGATTTTCTTCTGGGGAGATTCGAATCATGTCGATTCGATCAGAAATTTGCTGAATT 1314 Query 1353 TCGTCTTGGGTCATCCTGAAATCCCCGCTGTCCCGAGGAGGTTCGATATGAAGTTTTCGA 1412 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1315 TCGTCTTGGGTCATCCGGAAATCCCCGCTGTCCCGAGGAGATTCGATATGAAGTTTTCGA 1374 Query 1413 ATCCGAAGAACCCTTCGGAGACTGTTAGGATCACGAGTATCTTT-AACGGTCATTGGAAC 1471 |||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 1375 ATCCAAAGAACCCATCGGAGACTGTTAGGATCACGAGTAT-TTTCAACGGTCATTGGAAC 1433 Query 1472 GAGACCAAGAACTATCAGGGCCTTGATTCGCTTAAAGACAGGGACTTTAGAGAATTGCTC 1531 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1434 GAGACCAAGAACTACCAGGGCCTTGATTCGCTCAAAGACAGGGACTTTAGAGAATTGCTC 1493 Query 1532 AAGAAGTACTTCAAC-GAAGAAACAAACCGTGTTCCCGACGTGATGATCGTGAACTCGGG 1590 ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1494 AAGAAATACTTC-ACGGAAGAAACAAACCGTGTTCCCGACGTGATGATCGTGAACTCGGG 1552 Query 1591 TCTACACGACGGGATTCACTGGACTAGTCTTAGAGCCTTTGCGAAAGGTGCTGAAACCGC 1650 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1553 TCTACACGACGGGATTCACTGGACTAGTCTTAGAGCCTTTGCGAAAGGTGCTGAAACCGC 1612 Query 1651 AGCTGCGTTTTGGAGAGA-AGTTTTTGACGGGGTCAAAAGCAGAGGATTGCAACCGCCAG 1709 |||||| ||||||||||| | | ||||| |||||||||||||| |||||||||||||||| Sbjct 1613 AGCTGCATTTTGGAGAGATA-TATTTGATGGGGTCAAAAGCAGGGGATTGCAACCGCCAG 1671 Query 1710 AAGTGATTTTCAGGAACACAATCGCGACAGGCGGGTACGCGAGAATGCTAGCGTTTAACC 1769 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 1672 AAGTGATTTTCAGGAACACAATCGCGACAGGCGGTTACGCGAGAACGCTAGCGTTTAACC 1731 Query 1770 CGAGCAAAATGGAGGCGTTTAACGGAGTGTTTCTCGAGAAAATGAGGGATGCGGGATTGG 1829 |||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 1732 CGAGTAAAATGGAGGCTTTTAACGGAGTGTTTCTCGAGAAAATGAGGGACGCGGGATTGG 1791 Query 1830 TCACGAGCGTAGTTGATAACTTCGATATGACGTATCCGTGGCACTACGATAACCGTTGCA 1889 |||| |||||||||||||||||||||||||||||||||||||| || |||||||| |||| Sbjct 1792 TCACAAGCGTAGTTGATAACTTCGATATGACGTATCCGTGGCATTATGATAACCGGTGCA 1851 Query 1890 ACGATGGAGTTCATTACGGAAGAGCTCCAGCGAAAATGCGGTGGAGGGACGGTGAGATTG 1949 |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| | Sbjct 1852 ACGATGGAGTTCATTATGGAAGAGCTCCGGCAAAAATGCGGTGGAGGGACGGTGAGATCG 1911 Query 1950 GACATCAGTACTTTGTGGACTTGATGCTCGTTCACGTATTGCTGAATGCATTGTGTGTAA 2009 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1912 GACATCAGTACTTTGTGGATTTGATGCTCGTTCACGTATTGCTGAATGCATTGTGTGTAA 1971 Query 2010 GATAGATGTGGTAAAGTTTGGTAATTAGGAAGA-G--TCACGGATTCTTTGTTTATGTGT 2066 ||||||| |||||||||||| | ||||||||| | ||||||||||||| ||||||||| Sbjct 1972 GATAGATATGGTAAAGTTTGTT--TTAGGAAGACGAGTCACGGATTCTTTATTTATGTGT 2029 Query 2067 AGACTTAAtttttttGAAGTATAGATTATTATTATTTGGGAAAACTCAACTCAAGCTTGA 2126 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2030 AGACTTAATTTTTTTGAAGTATAGATTATTATTATTTGCGAAAACTCAACTCAAGCTTGA 2089 Query 2127 GTTATATTGTATAATAGCAAGAGATTGGAGCAACAATAGTGTACTATATGTAT 2179 ||| ||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 2090 GTTTTATTGTATAATAGCAAGAGATTGGAGCAACACTTGTGTACTATATGTAT 2142 > Ahg488789 jgi|Araly1|488789|fgenesh2_kg.6__1923__AT5G19060.1 Length=1830 Score = 1110 bits (601), Expect = 0.0 Identities = 1175/1446 (81%), Gaps = 63/1446 (4%) Strand=Plus/Plus Query 600 AGAATTTCACGGCGAATTTGA-TGAGAGGTTGGTTGGCTCCGGGAGGAGCGCCGTGTAGA 658 |||| |||||||||||| | | ||| | ||| | ||||||||||||| | ||| ||| Sbjct 335 AGAACTTCACGGCGAATGT-ACTGAAAAACTGGCTAGCTCCGGGAGGAGAGAAGTGCAGA 393 Query 659 GAAGCG-AAGACCGTCGAGATTTCAGTTCCCGGTGTCGACGGGATTGATTCT-GTGGAGT 716 |||| | |||||||||||||||| ||||| || ||||||||| |||| | || |||| Sbjct 394 GAAG-GAAAGACCGTCGAGATTTTTGTTCCGGGAATCGACGGGAAGGATT-TAGTAGAGT 451 Query 717 TAACCGCCGGAGAGATTCATGAATTCAAATTTCAAGCCATAGACGAATCTGGAAAA-AAC 775 |||| || || |||||||| ||||||| ||||||| | |||| || ||||||||| | Sbjct 452 TAACGGCTGGTGAGATTCACGAATTCAGATTTCAATCTTTAGATGATTCTGGAAAACGA- 510 Query 776 GTTTGCATTGGTGGGGACTATTTCGAGACTGATATATCCGGCGAGAACTGGAAATCGAGA 835 ||||| || ||||| || || ||||| |||||| | ||||| || ||||||||||| ||| Sbjct 511 GTTTGTATCGGTGGAGATTACTTCGAAACTGATCTTTCCGGTGAAAACTGGAAATCAAGA 570 Query 836 CCACCGGTGAAAGATTTCGGCAACGGAACTTACTCTTTCTCT-TTACAGGTTCATCCTGA 894 ||||||||| ||||||| || ||||||||||||||||| ||| || ||| |||||||||| Sbjct 571 CCACCGGTGGAAGATTTAGGAAACGGAACTTACTCTTTATCTCTT-CAGATTCATCCTGA 629 Query 895 GTTCGCCGGAGATT-TCAATCTCACCGTCATTTTACTCTTCCGTCA-TTACCAAGGTCTT 952 ||||||||||||| | |||||||| || |||||||||||||||| || |||||||||| Sbjct 630 TTTCGCCGGAGATTAT-AATCTCACTGTTGTTTTACTCTTCCGTCACTT-CCAAGGTCTT 687 Query 953 AAGTTTAGTACCTCACGTTTAGGCTTT-GACCGAAAGCTTCGCAATGTT-AGATTACGCT 1010 || |||||| || | || || ||||| || |||||| || ||| || | | |||| | Sbjct 688 AAATTTAGTCCCGCGCGCTT-CGCTTTCAACAAAAAGCTACGGAAT-TTCAAACTACGGT 745 Query 1011 TTGTTAAG-ACGCCTGACGTTACTCTGCCGGAGCTCCGGTCATGTAAAAAATCTGATTTT 1069 || ||||| || || |||||| | | |||||||| ||| |||| | || ||||| Sbjct 746 TTATTAAGAAC-CCCGACGTTGTTTTACCGGAGCTTCGGAGATGTGATCGGTCCGATTTC 804 Query 1070 AACAGAGATGCTTGGTCTGGACGATGGACTAGGCTTGGGAAGAATGATGAGTGTCAGATT 1129 ||||||||| |||||| ||||| |||| ||||||||| ||||| || |||||| | || Sbjct 805 GACAGAGATGTTTGGTCCGGACGGTGGATTAGGCTTGGTAAGAACGACGAGTGTGAAATC 864 Query 1130 AGCAATGACGGGCGTTACCGCTGCCT-CGCTG-CGGATTTCCCTTGCCGGAAACCGTGGT 1187 ||||| ||||| |||||||| ||| | | | | || ||||| |||||||||||| |||| Sbjct 865 AGCAACGACGGTCGTTACCGTTGCTTAC-CGGATGG-TTTCCGTTGCCGGAAACCATGGT 922 Query 1188 GCGACGGTGCGGT-T-GGAGCTATAGAGAGTAATGGTTGGGTTTACTCTAGCCATTGCTC 1245 ||||||| || | | |||| | |||| || || |||||||||||||| || |||||||| Sbjct 923 GCGACGGAGCTTTATCGGAG-T-TAGAAAGCAACGGTTGGGTTTACTCGAGTCATTGCTC 980 Query 1246 -TTTCAAGCTCTTCTCTGCG-GAA-AAGGCTTGGGATTGCTTGAAAG-GCAAATGGATTT 1301 ||| ||||||||||||| | ||| | ||||||||||| ||| ||| ||||||||||| Sbjct 981 GTTT-AAGCTCTTCTCTG-GTGAATCA-GCTTGGGATTGTTTG-AAGAACAAATGGATTT 1036 Query 1302 TCTTCTGGGGAGATTCGAATCATGTTGATTCGATCAGAAACTTGCTGAATTTCGTCTTGG 1361 ||||||||||||| || ||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 1037 TCTTCTGGGGAGACTCTAATCATGTTGATTCGATCAGAAACTTGTTGAATTTTGTCTTGG 1096 Query 1362 GTCATCCTGAAATCCCCGCTGTCCCGAGGAGGTTCGATATGAAGTTTTCGAATCCGAAGA 1421 ||||||| || ||| || || || |||||||| ||| ||||||| ||||||||||||| Sbjct 1097 GTCATCCAGAGATCGGGGCCGTGCCAAGGAGGTTTGATTTGAAGTTCTCGAATCCGAAGA 1156 Query 1422 ACCCTTCGGAGACTGTTAGGATCACGAGTATCTTT-AACGGTCATTGGAACGAGAC-CAA 1479 || | ||||| || ||||||||||||||||| ||| || || |||||||||||||| ||| Sbjct 1157 ACTCATCGGAAACAGTTAGGATCACGAGTAT-TTTCAATGGACATTGGAACGAGACACAA 1215 Query 1480 GAACTATCAGGGCCTTGATTCGCTTAAAGA-CAGGGACTTTAGAGAATTGCTCAAGAAG- 1537 |||||||| || |||||||| |||||||| | || ||||||||||||||| || ||| Sbjct 1216 -AACTATCAAGGTCTTGATTCACTTAAAGATGATGG-CTTTAGAGAATTGCTTAA-AAGC 1272 Query 1538 TACTTCAACGAAGAAACAAACCGTGTTCCCGACGTGATGATCGTGAACTCGGGTCTACAC 1597 || ||| |||||| || | |||| || |||||||||||||| ||||||||||||||| Sbjct 1273 TATTTCGCCGAAGAGAC---CGGTGTACCGGACGTGATGATCGTTAACTCGGGTCTACAC 1329 Query 1598 GACGG-GATTCACTGGACTAGTCTTAGAGCCTTTGCGAAAGGTGCTGAAACCGCAGCTGC 1656 ||||| | |||||||| ||| |||||||||||| ||||||| || |||||||| ||| | Sbjct 1330 GACGGTG-TTCACTGGTCTAACCTTAGAGCCTTTACGAAAGGAGCAGAAACCGCGGCT-C 1387 Query 1657 -GTTTTGGAGAGAA-GTTTTTGACGGGGTCAAAAG-CAGAGGATTGCAACCGCCAGAAGT 1713 ||| |||||| || ||||| ||| ||| |||| | | ||||||||||| || ||||| Sbjct 1388 GGTTCTGGAGA-AACGTTTTCGACTCGGT-GAAAGCCCGCGGATTGCAACCTCCGGAAGT 1445 Query 1714 GATTTTCAGGAACACAATCGCGACAGGCGGGTACGCGAGAATGCTAGCGTTTAACCCGAG 1773 | |||| |||||||| |||||||| || || |||||||| | ||| ||||||||||| || Sbjct 1446 GGTTTTTAGGAACACGATCGCGACGGGTGGTTACGCGAGGACGCTTGCGTTTAACCCAAG 1505 Query 1774 CAAAATGGAGGCGTTTAACGGAGTGTTTCTCGAGAAAATG-AGGGATGCGGGATTGGTCA 1832 ||| ||||| | || || || |||||| | ||||||||| |||| | ||||||||| Sbjct 1506 CAAGATGGAAGTGTACAATGGGGTGTTTTTGGAGAAAATGAAGGGGT-TAGGATTGGTCT 1564 Query 1833 CGAGCGTAG-TTGATAACTTCGATATGACGTATCCGTGGCACTACGATAACCGTTGCAAC 1891 |||| || | ||||||||||||||||||||||||||||||| | |||||||| || ||| Sbjct 1565 CGAGTGT-GATTGATAACTTCGATATGACGTATCCGTGGCATTTTGATAACCGGTGTAAC 1623 Query 1892 GATGGAGTTCATTACGGAAGAGCTCCAGCGAAAATGCGGTGGAGGGACGGTGAGATTGGA 1951 || || ||||| || || |||||||| ||||| ||||||||||| ||||| |||||||| Sbjct 1624 GACGGGGTTCACTATGGGAGAGCTCCGGCGAAGATGCGGTGGAGAGACGGCGAGATTGGG 1683 Query 1952 CATCAGTACTTTGTGGA-CTTGATGCTCGTTCACGTATTGCTGAATGCA-TTGTGTGTAA 2009 |||||||||||||| || || ||||| ||||| || ||| | |||||| || ||||||| Sbjct 1684 CATCAGTACTTTGTTGATCTC-ATGCTTGTTCATGTCTTGTTAAATGCAATT-TGTGTAA 1741 Query 2010 GATAGA 2015 |||||| Sbjct 1742 GATAGA 1747 > Ahg926144 jgi|Araly1|926144|scaffold_201705.1 Length=409 Score = 359 bits (194), Expect = 5e-98 Identities = 224/238 (94%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 230 ATGCCGGAGAAAGGAATGATTTTCCCGCCGGTACCGAGCCAATTGGTGATTTTACGGCCA 289 |||| |||||||||||||||||| || ||||||||||||||||||||| ||||||||||| Sbjct 21 ATGCTGGAGAAAGGAATGATTTTGCCTCCGGTACCGAGCCAATTGGTGCTTTTACGGCCA 80 Query 290 AGCCCTCTT-CTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTGCTTCCTTATGTT 348 | |||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 81 AACCCT-TTGCTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTTCTTCCTCATGTT 139 Query 349 AGTCGTTTGGAGTATTGACGGTTGTTCGATTCAAAGCTTCGTTCAGCCATGGAGATTCAA 408 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 140 AGTCGTTTGGAGTATTGACGGTTGTTCGATTCAAAGCTTCGTTGAGCCATGGAGATTCAA 199 Query 409 TGCTTACTCTGTTCGAATCAGTCCTTCTCCGTCGCCGTTTA-TGTCAACGAAACCCAA 465 ||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct 200 TGCATACTCTGTTCGAATCAGTCCTTCTCCGTCGCC-TTTAATGTCACCGAAACCCAA 256 > Ahg944013 jgi|Araly1|944013|scaffold_700242.1 Length=409 Score = 353 bits (191), Expect = 3e-96 Identities = 223/238 (94%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 230 ATGCCGGAGAAAGGAATGATTTTCCCGCCGGTACCGAGCCAATTGGTGATTTTACGGCCA 289 |||| |||||||||||||||||| || ||||||||||||||||||||| ||||||||||| Sbjct 21 ATGCTGGAGAAAGGAATGATTTTGCCTCCGGTACCGAGCCAATTGGTGCTTTTACGGCCA 80 Query 290 AGCCCTCTT-CTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTGCTTCCTTATGTT 348 | |||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 81 AACCCT-TTGCTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTTCTTCCTCATGTT 139 Query 349 AGTCGTTTGGAGTATTGACGGTTGTTCGATTCAAAGCTTCGTTCAGCCATGGAGATTCAA 408 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 140 AGTCGTTTGGAGTATTGACGGTTGTTCGATTCAAAGCTTCGTTGAGCCATGGAGATTCAA 199 Query 409 TGCTTACTCTGTTCGAATCAGTCCTTCTCCGTCGCCGTTTA-TGTCAACGAAACCCAA 465 ||| |||||||||||||||||||||||||||||||| |||| ||||| | |||||||| Sbjct 200 TGCATACTCTGTTCGAATCAGTCCTTCTCCGTCGCC-TTTAATGTCACCAAAACCCAA 256 > Ahg937275 jgi|Araly1|937275|scaffold_501466.1 Length=598 Score = 353 bits (191), Expect = 3e-96 Identities = 223/238 (94%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 230 ATGCCGGAGAAAGGAATGATTTTCCCGCCGGTACCGAGCCAATTGGTGATTTTACGGCCA 289 ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| Sbjct 210 ATGCCGGAGAAAGGAATGATTTTGCCTCCGGTACCGAGCCAATTGGTGCTTTTACGGCCA 269 Query 290 AGCCCTCTT-CTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTGCTTCCTTATGTT 348 | |||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 270 AACCCT-TTGCTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTTCTTCCTCATGTT 328 Query 349 AGTCGTTTGGAGTATTGACGGTTGTTCGATTCAAAGCTTCGTTCAGCCATGGAGATTCAA 408 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 329 AGTCGTTTGGAGTATTGACGGTTGTTCGATTCAAAGCTTCGTTGAGCCATGGAGATTCAA 388 Query 409 TGCTTACTCTGTTCGAATCAGTCCTTCTCCGTCGCCGTTTA-TGTCAACGAAACCCAA 465 ||| |||||||||||||||||||||| ||||||||| |||| ||| | |||||||||| Sbjct 389 TGCATACTCTGTTCGAATCAGTCCTTTTCCGTCGCC-TTTAATGTTACCGAAACCCAA 445 Score = 187 bits (101), Expect = 3e-46 Identities = 120/129 (93%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 230 ATGCCGGAGAAAGGAATGATTTTCCCGCCGGTACCGAGCCAATTGGTGATTTTACGGCCA 289 |||| |||||||||||||||||| || ||||||||||||||||||||| ||||||||||| Sbjct 21 ATGCTGGAGAAAGGAATGATTTTGCCTCCGGTACCGAGCCAATTGGTGCTTTTACGGCCA 80 Query 290 AGCCCTCTT-CTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTGCTTCCTTATGTT 348 | |||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 81 AACCCT-TTGCTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTTCTTCCTCATGTT 139 Query 349 AGTCGTTTG 357 ||||||||| Sbjct 140 AGTCGTTTG 148 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82351109690 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5