BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G10340.1 Length=2584 Score E Sequences producing significant alignments: (Bits) Value Ahg928723 jgi|Araly1|928723|scaffold_301180.1 3190 0.0 Ahg487203 jgi|Araly1|487203|fgenesh2_kg.6__337__AT5G04230.1 1336 0.0 > Ahg928723 jgi|Araly1|928723|scaffold_301180.1 Length=2166 Score = 3190 bits (1727), Expect = 0.0 Identities = 2030/2177 (93%), Gaps = 18/2177 (1%) Strand=Plus/Plus Query 221 CCGGTTTCTTTAACCGAGTCGGCGCGCATGGAGCTATGCAATCAAAACAATCACATCACC 280 ||| |||||||||||| |||||||| |||||||||||||||||||||||| ||||||| Sbjct 1 CCGTTTTCTTTAACCGGGTCGGCGCTCATGGAGCTATGCAATCAAAACAACCACATCA-- 58 Query 281 GCCGTCTCGGGCGATCCGTTGAACTGGAACGCGACGGCCGAAGCTTTGAAAGGGAGCCAC 340 | | ||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 59 -----C-C-GGCGATCCGTTGAACTGGAACGCGACGGCGGACGCTTTGAAAGGGAGCCAC 111 Query 341 CTGGATGAGGTGAAACGAATGGTGAAAGAGTATAGGAAAGAGGCGGTGAAGTTAGGAGGT 400 |||| |||||||||||||||||| |||| |||||||||| ||||||||||||||||||| Sbjct 112 TTGGACGAGGTGAAACGAATGGTGGAAGATTATAGGAAAGGGGCGGTGAAGTTAGGAGGT 171 Query 401 GAGACTTTGACGATTGGTCAAGTAGCCGCCGTGGCTAGAGGA-G-G-AGGAGGA-TCTAC 456 ||||| ||||||||||||||||| |||||||| ||||||||| | | ||||||| | ||| Sbjct 172 GAGACGTTGACGATTGGTCAAGTCGCCGCCGTCGCTAGAGGAGGAGAAGGAGGAGT-TAC 230 Query 457 GGTGGAGCTAGCGGAGGAGGCTCGTGCCGGAGTCAAGGCGAGTAGCGAATGGGTGATGGA 516 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 231 GGTGGAGCTGGAGGAGGAGGCTCGTGCCGGAGTCAAGGCGAGTAGCGAATGGGTGATGGA 290 Query 517 GAGCATGAACCGAGGAACGGACAGTTATGGAGTTACCACAGGGTTTGGTGCAACTTCCCA 576 |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct 291 GAGCATGAACCGAGGAACCGACAGTTATGGAGTCACCACAGGGTTTGGTGCTACTTCCCA 350 Query 577 TAGAAGAACCAAACAAGGCGGTGCACTTCAAAATGAGCTTATTAGGTTCTTGAATGCCGG 636 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 351 TAGAAGAACTAAACAAGGCGGTGCACTTCAAAATGAGCTTATTAGGTTCTTGAACGCCGG 410 Query 637 AATATTTGGCCCCGGCGCCGGGGACACGTCACACACGTTGCCAAAGCCGACAACAAGAGC 696 |||||||||| ||||||||| |||||| |||||||||||||||||||||| |||||||| Sbjct 411 AATATTTGGCATCGGCGCCGGAGACACGACACACACGTTGCCAAAGCCGACGACAAGAGC 470 Query 697 GGCAATGCTCGTCCGTGTCAACACTCTCCTCCAAGGCTACTCCGGTATACGCTTCGAGAT 756 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 471 GGCAATGCTCGTCCGTGTCAACACTCTCCTCCAAGGCTACTCCGGTATACGCTTCGAGAT 530 Query 757 TCTCGAAGCAATTACAAAGCTTCTCAACCACGAAATCACTCCGTGCCTCCCTCTCCGTGG 816 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 531 TCTCGAAGCCATTACAAAGCTTCTCAACCACGAAATCACTCCGTGCCTCCCTCTTCGTGG 590 Query 817 CACCATCACCGCCTCCGGTGACCTTGTTCCTCTCTCTTACATCGCCGGACTTCTCACTGG 876 ||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||| || Sbjct 591 CACCATCACGGCCTCCGGTGACCTTATCCCTCTCTCTTACATCGCCGGACTCCTCACCGG 650 Query 877 CCGTCCCAACTCCAAAGCCGTGGGTCCCT-CTGGTGAGACTCTCACTGCCTCTGAGGCCT 935 |||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 651 CCGTCCTAACTCCAAAGCCGTGGGTCCCTTC-GGTGAGACTCTCACTGCCTCTGAGGCCT 709 Query 936 TTAAGCTCGCCGGAGTATCGTCCTTTTTCGAGCTGCAGCCTAAGGAAGGACTAGCACTTG 995 |||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct 710 TTAAGCTCGCGGGAGTATCGTCTTTTTTTGAGCTTCAGCCTAAGGAAGGACTAGCACTTG 769 Query 996 TGAACGGGACAGCGGTTGGATCGGGTTTGGCCTCAACGGTTTTGTTCGATGCAAATATTT 1055 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 770 TGAACGGGACAGCGGTTGGATCGGGTTTGGCCTCGACGGTTCTGTTCGATGCAAATATTT 829 Query 1056 TGGCTGTTTTATCGGAAGTTATGTCTGCCATGTTCGCAGAGGTTATGCAAGGGAAACCGG 1115 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 830 TGGCTGTTTTGTCGGAGGTTATGTCTGCCATGTTCGCAGAGGTTATGCAAGGGAAACCGG 889 Query 1116 AGTTTACAGATCATCTTACGCATAAGCTCAAGCACCATCCCGGTCAGATCGAAGCCGCCG 1175 ||||||| || |||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct 890 AGTTTACCGACCATCTTACGCATAAACTCAAGCACCATCCCGGTCAGATCGAAGCAGCGG 949 Query 1176 CAATTATGGAACATATATTAGACGGAAGCTCTTACGTTAAAGAAGCTCAACTTCTCCACG 1235 | ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct 950 CGATTATGGAACATATATTGGACGGAAGCTCTTACGTTAAAGAAGCTCAACTTATCCACG 1009 Query 1236 AAATGGATCCTCTTCAAAAACCTAAACAAGATCGGTACGCTTTACGTACGTCACCACAAT 1295 ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||| Sbjct 1010 AAATGGATCCTCTTCAAAAACCTAAACAAGATCGGTACGCTTTACGTACATCGCCGCAAT 1069 Query 1296 GGCTTGGGCCGCAGATTGAAGTGATCAGAGCGGCTACTAAAATGATTGAGCGTGAGATCA 1355 ||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 1070 GGCTTGGCCCGCAGATTGAAGTGATCAGATCGGCCACTAAAATGATTGAGCGTGAGATCA 1129 Query 1356 ACTCTGTTAATGATAACCCTTTGATAGATGTGTCGAGGAACAAGGCGTTGCACGGTGGAA 1415 |||| ||||| ||||||||||||||||||||||| ||||| ||||| |||||||| || | Sbjct 1130 ACTCGGTTAACGATAACCCTTTGATAGATGTGTCAAGGAATAAGGCTTTGCACGGCGGGA 1189 Query 1416 ATTTCCAAGGGACACCGATCGGTGTTGCCATGGATAATTCCCGTCTAGCCATTGCTTCCA 1475 |||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||| | Sbjct 1190 ATTTCCAAGGGACACCAATTGGTGTCGCCATGGATAATTCTCGTCTAGCCATTGCTTCGA 1249 Query 1476 TTGGGAAACTCATGTTTGCGCAGTTTTCTGAACTAGTGAACGATTTCTACAACAATGGTT 1535 | |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 1250 TAGGGAAACTCATGTTCGCCCAGTTTTCTGAACTAGTGAACGATTTCTACAACAATGGTT 1309 Query 1536 TGCCTTCTAATCTATCTGGTGGGAGAAACCCTAGTCTTGATTACGGGTTTAAAGGCGCGG 1595 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1310 TGCCTTCTAATCTATCCGGTGGGAGAAACCCTAGTCTTGATTACGGATTTAAAGGCGCGG 1369 Query 1596 AAATAGCCATGGCTTCTTATTGCTCCGAGCTTCAGTTCCTGGCTAATCCCGTGACCAACC 1655 | |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 1370 AGATAGCCATGGCTTCTTATTGCTCCGAGCTTCAGTTCTTGGCTAATCCGGTGACCAACC 1429 Query 1656 ATGTCCAAAGCGCAGAGCAGCATAACCAAGACGTTAATTCCCTAGGGCTAATCTCTAGCA 1715 ||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||| Sbjct 1430 ATGTCCAAAGCGCAGAGCAGCATAACCAAGATGTTAATTCCCTAGGGTTGATCTCAAGCC 1489 Query 1716 GGAAAACTGCAGAAGCAGTGGATATCCTCAAGCTAATGTCCACAACCTACTTAGTCGCGC 1775 ||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct 1490 GGAAAACCGCAGAAGCAGTCGATATCCTCAAGCTAATGTCCACGACCTATTTAGTCGCGC 1549 Query 1776 TTTGCCAAGCCGTTGATCTAAGACATCTTGAAGAGAATCTGAAGAAGGCGGTTAAATCAG 1835 | ||||||||| |||||||||||||||||||||||||||||||||| || ||||||| | Sbjct 1550 TGTGCCAAGCCATTGATCTAAGACATCTTGAAGAGAATCTGAAGAAAGCAATTAAATCTG 1609 Query 1836 CAGTGAGTCAGGTGGCGAAACGGGTCTTAACCGTTGGTGCCAACGGGGAGCTACATCCGT 1895 ||||||||||||||||||||||||||||||||||||| | ||| || ||||||||||| | Sbjct 1610 CAGTGAGTCAGGTGGCGAAACGGGTCTTAACCGTTGGGGTCAATGGTGAGCTACATCCTT 1669 Query 1896 CAAGGTTCACAGAACGTGATGTCCTCCAAGTGGTTGACCGAGAGTACGTGTTCTCATACG 1955 | |||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct 1670 CGAGGTTCACTGAACGCGATGTTCTCCAAGTGGTTGACCGAGAATACGTGTTCTCATACG 1729 Query 1956 CAGACGATCCCTGCAGCCTCACTTACCCGCTAATGCAGAAACTTAGACACATTCTTGTAG 2015 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1730 CAGACGATCCCTGCAGCCTCACTTACCCGTTAATGCAGAAACTTAGACACATTCTTGTAG 1789 Query 2016 ACCACGCTTTAGCGGATCCAGAACGCGAGGCCAATTCCGCGACATCGGTTTTCCACAAAA 2075 | |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| Sbjct 1790 ATCACGCTTTAGCGGATCCAGAACGCGAGGCCAATTCCGCTACATCAGTTTTCCAGAAAA 1849 Query 2076 TCGGAGCTTTTGAAG-CCGAGCTGAAACTGCTTCTCCCTAAAGAAGTAGAACGCGTCCGG 2134 ||||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1850 TCGGAGCTTTTGA-GTCCGAGCTGAAACTGCTTCTCCCTAAAGAAGTGGAACGTGTCCGG 1908 Query 2135 GTTGAATACGAGGAAGGAACATCGGCTATAGCTAACCGGATTAAGGAATGTCGGTCTTAT 2194 ||||| |||||||||||| | ||| ||||||||||||||||||||||||||||||||||| Sbjct 1909 GTTGAGTACGAGGAAGGATCCTCGACTATAGCTAACCGGATTAAGGAATGTCGGTCTTAT 1968 Query 2195 CCATTGTATCGGTTTGTCCGCGATGAGCTAAATACTGAACTGCTTACTGGAGAGAATGTT 2254 || |||| |||||||||||| | |||||| ||||||||||||| ||||||||||||||| Sbjct 1969 CCGCTGTACCGGTTTGTCCGCAACGAGCTAGATACTGAACTGCTCACTGGAGAGAATGTT 2028 Query 2255 CGGTCGCCAGGAGAGGAGTTTGATAAAGTGTTCTTAGCGATTTCTGATGGAAAACTTATT 2314 |||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 2029 CGGTCGCCGGGAGAGGAGTTTGATAAAGTGTTCTCGGCGATTTCTGATGGAAAGCTTATT 2088 Query 2315 GATCCGTTGTTGGAATGTCTCAAGGAGTGGAACGGAGCTCCGGTTTCAATCTGTTGAAAA 2374 |||||||||||||||||||||||||||||||||||||||||| || | ||||||| |||| Sbjct 2089 GATCCGTTGTTGGAATGTCTCAAGGAGTGGAACGGAGCTCCGATTCCGATCTGTTAAAAA 2148 Query 2375 TCTTTTTCGATAGATCT 2391 ||||||| |||||||| Sbjct 2149 TCTTTTTTTATAGATCT 2165 > Ahg487203 jgi|Araly1|487203|fgenesh2_kg.6__337__AT5G04230.1 Length=2113 Score = 1336 bits (723), Expect = 0.0 Identities = 1643/2075 (79%), Gaps = 112/2075 (5%) Strand=Plus/Plus Query 323 GCTTTGAAAGGGAGCCACCTGGATGAGGTGAA-ACGAATGGTGAAAGAGTATAGGAAA-G 380 ||||| ||||||||||||||||| |||||||| | | |||||||| || ||||||||| | Sbjct 73 GCTTTAAAAGGGAGCCACCTGGAGGAGGTGAAGAAG-ATGGTGAAGGATTATAGGAAAGG 131 Query 381 AGGCGGTGAAGTTAGGAGGTGAGACTTTGACGATTGGTCAAGTAGCCGCCGTGGCTAGAG 440 | ||||| || | || || ||||| |||| || ||||| || || || ||||| || Sbjct 132 A-ACGGTGCAGCTCGGCGGAGAGACGCTGACCATCGGTCAGGTTGCGGCGGTGGC--GA- 187 Query 441 GAGGAGGAGGATCTACGGTGGAGCTAGCGGAGGAGGCTCGTGCCGGAGTCAAGGCGAGTA 500 | |||||| | | || |||||||| | ||||||||||||||||| || |||||||||| Sbjct 188 GTGGAGGA--A-CGACAGTGGAGCTTTCTGAGGAGGCTCGTGCCGGTGTAAAGGCGAGTA 244 Query 501 GCGAATGGGTGATGGAGAGCATGAACCGAGGAACGGACAGTTATGG-AGTTACCACAGGG 559 | || |||||||||||||||||||| || || || |||| |||||| | | ||||| || Sbjct 245 GTGAGTGGGTGATGGAGAGCATGAATCGTGGTACCGACACTTATGGTA-TCACCACTGGA 303 Query 560 TTTGGTGCAACTTCCCATAGAAGAACCAAACAAGGCGGTGCACTTCAAAATGAGCTTATT 619 |||||| || |||| | ||| || || | ||||| | ||| |||||||| ||||||||| Sbjct 304 TTTGGTTCATCTTCTCGTAGGAGGACTGACCAAGGTGCTGCTCTTCAAAAAGAGCTTATT 363 Query 620 AGGTTCTTGAATGCCGGAATATTTGGC-CCCGGCG-CCG-G--G--GACACGTCACACAC 672 |||| |||||| ||||| ||| || || |||||| | | | | ||||||||| |||| Sbjct 364 AGGTACTTGAACGCCGGGATA-TTCGCTACCGGCGACGGAGATGACGACACGTCAAACAC 422 Query 673 G-TTGCCAAAGCCGACAACAAGAGCGGCAATGCTCGTCCGTGTCAACACTCTCCTCCAAG 731 | || || || | | ||||||||||| |||||| |||| || ||||| |||||||||| Sbjct 423 GCTT-CCCCGGCTGGCTACAAGAGCGGCGATGCTCATCCGCGTAAACACCCTCCTCCAAG 481 Query 732 GCTACTCCGGTATACGCTTCGAGATTCTCGAAGCAATTACAAAGCTT-CTCAACCACG-A 789 ||||||| ||||||||||| ||||| |||||||| || ||||| || ||||||| | | Sbjct 482 GCTACTCTGGTATACGCTTTGAGATACTCGAAGCCATCACAAA-ATTCCTCAACC-GGAA 539 Query 790 AATCACTCCG-TGCCTCCCTCTCCGTGGCACCATCACCGCCTCCGGTGACCTTGTTCC-T 847 |||||| ||| | |||||||||||| |||||||| ||||||||||| ||||| ||||| | Sbjct 540 AATCACACCGCT-CCTCCCTCTCCGAGGCACCATTACCGCCTCCGGCGACCTCGTTCCAT 598 Query 848 CTCTCTTACATCGCCGGACTTCTCACT-GGCCGTCCCAACTCCA-AAGCCGTGGGTCCC- 904 | || || || | ||| |||||| | || || ||||||| || | | |||| ||| Sbjct 599 -TATCGTATATTGTTGGATTTCTCA-TCGGGCGCCCCAACT-CACGATCTTTGGG-CCCA 654 Query 905 TCTGGTGAGACT-CTCACTGCCTCTGAGGCCTTTAAGCTCGCCGGAGTATCGTCCTTTTT 963 || || |||| | ||||| ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct 655 TCCGGCGAGA-TCCTCACCGCCTCGGAGGCCTTCAAGCTTGCCGGAGTATCATCCTTTTT 713 Query 964 CGAGCTGCAGCCTAAGGAAGGACTAGCACTTGTGAACGGGACAGCGGTTGGATCGGGTTT 1023 ||| || ||||| |||||||| || || || ||||| ||||| ||||| ||||| | ||| Sbjct 714 CGAACTCCAGCCCAAGGAAGGGCTTGCGCTCGTGAATGGGACTGCGGTGGGATCTGCTTT 773 Query 1024 GGCCTCAACGGTT-TTGTTCGATGCAAATATTTTGGCTGTTTTAT-CGGAAGTT-ATGTC 1080 ||||| || ||| ||| |||||| || |||||||| ||||| | |||| ||| | || Sbjct 774 AGCCTCCAC-GTTACTGTACGATGCCAACATTTTGGCGGTTTT-TGCGGAGGTTGCT-TC 830 Query 1081 TGCCATGTTCGCAGAGGTTATGCAAGGGAAACCGGAGTTTACAGATCATCTTACGCATAA 1140 |||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 831 GGCCATGTTTGCTGAGGTTATGCAGGGGAAACCGGAGTTTACGGATCATCTTACGCATAA 890 Query 1141 GCTCAAGCACCATCCCGGTCAGATCGAAGCCGCCGCAATTATGGAACATATATTAGACGG 1200 |||||||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 891 ACTCAAGCACCATCCTGGTCAGATAGAAGCCGCCGCAATCATGGAGCATATCTTAGACGG 950 Query 1201 AAGCTCTTACGTTAAAGAAGCTCAACTTCTCCACGAA-ATGGATCCTCTTCAAAAACCTA 1259 ||||||||| || ||||||||||||| ||||||| || || ||||| ||||| ||||||| Sbjct 951 AAGCTCTTATGTCAAAGAAGCTCAACATCTCCAC-AAGATTGATCCGCTTCAGAAACCTA 1009 Query 1260 AACAAGATCGGTACGCTTTACGTACGTCACCACAATGGCTTGGGCCGCAGATTGAAGTGA 1319 |||||||||| |||||| | || ||||| || |||||||| || || |||||||| |||| Sbjct 1010 AACAAGATCGTTACGCTCTGCGAACGTCGCCGCAATGGCTCGGACCACAGATTGAGGTGA 1069 Query 1320 TCAGAGCGGCTACTAAA-ATGATTGAGCGTGAGATCAACTCTGTTAATGATAACCCTTTG 1378 | ||||| || || ||| ||||| || |||||||| ||||| || || |||||||||||| Sbjct 1070 TAAGAGCAGCGAC-AAAGATGATCGAACGTGAGATAAACTCGGTAAACGATAACCCTTTG 1128 Query 1379 ATAGATGTGTCGA-GGAACAAGGCGT-TGCACGGTGGAAATTTCCAAGGGACACCGATCG 1436 || ||||| || | ||||||| || | | |||||||| |||||||| ||||||||||| | Sbjct 1129 ATCGATGTTTC-ACGGAACAAAGC-TATTCACGGTGGGAATTTCCAGGGGACACCGATTG 1186 Query 1437 GTGTTGCCATGGATAATTCCCGTCTAGCCA-TTGCTTCCATTGGGAAACTCATGTTTGCG 1495 |||| ||||||||||| | ||||||| || ||||||| | ||||| || ||||| || Sbjct 1187 GTGTCGCCATGGATAACACTCGTCTAG-CACTTGCTTCGGTCGGGAAGCTAATGTTCGCT 1245 Query 1496 CAGTTTTCTGAACTAGTGAACGATTTCTACAACAATGGTTTGCCTTCTAATCTATCTGGT 1555 ||||| ||||||| || || |||| ||||||||| || || || |||||||||||||| Sbjct 1246 CAGTTCACTGAACTCGTAAATGATTACTACAACAACGGGTTACCCTCTAATCTATCTGGC 1305 Query 1556 GGGAGAAACCCTAGTCTTGATTACGGGTTTAAAGGCGCGGAAATAGCCATGGCTTCTTAT 1615 ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| Sbjct 1306 GGGAGAAACCCTAGTCTTGATTACGGGTTAAAAGGCGCAGAAGTAGCCATGGCTTCTTAT 1365 Query 1616 TGCTCCGAGCTTCAGTTCCTGGCTAATCCCGTGACCAACCATGTCCAAAGCGCAGAGCAG 1675 ||||| |||||||||||| | |||||||| ||||| ||||||||| ||||||| ||| Sbjct 1366 TGCTCAGAGCTTCAGTTCTTAGCTAATCCTGTGACGAACCATGTCGAAAGCGCCTCGCAA 1425 Query 1676 CATAACCAAGACGTTAATTCCCTAGGGCTAATCTCTAGCAGGAAA-ACTGCAGAAGCAGT 1734 || || ||||| ||||| || || ||||| ||||| ||| | ||| || |||||||| || Sbjct 1426 CACAATCAAGATGTTAACTCTCTTGGGCTGATCTCGAGCCG-AAAGACAGCAGAAGCTGT 1484 Query 1735 GGATATCCTCAAGCTAATGTCCACAACCTACTTAGTCGCGCTT-TGCCAAGCCGTTGATC 1793 || |||||||||||| ||||| ||||| ||||| || || || ||||||||| |||||| Sbjct 1485 GGTTATCCTCAAGCTCATGTCAACAACTTACTTGGTAGCT-TTGTGCCAAGCCTTTGATC 1543 Query 1794 TAAGACATCTTGAAGAGAAT-CTGAAGAAGGCGGTTAAATCAG-CAGTGAGTCAGG-TGG 1850 | ||||| |||||||| ||| || || || |||||||| || | ||||| ||| || Sbjct 1544 TGAGACACCTTGAAGA-AATTCTAAAAAAAGCGGTTAAGG-AGGCTGTGAGCCAGACTGC 1601 Query 1851 CGAAACGGGTCTTAACCGTTGGTGCCAACGGGGAGCTACAT-CCGTCAAGGTTCACAGAA 1909 | ||| | || | | | | | | || | | ||| ||| ||| ||| || Sbjct 1602 CAAAA-GCGT-T---C--TAGCT---ATCGA--A-C--CATTCCG-CAAA---CAC-GA- 1640 Query 1910 CGTGATGTCCTCCAAGTGGTTGACCGAGAGTACGTGTTCTCATACGCAGACGATCCCTGC 1969 || || || ||| ||| || |||| || ||||| ||||| || | || || ||| | Sbjct 1641 CGACAT-TC-TCCGAGTTGTCAACCGCGAATACGTCTTCTCCTATGTTGATGA-CCCAAC 1697 Query 1970 -AGCCTCACTTACCCGCTAATGCAGAAACTTAGACACATTCT-TGTAGACCACGCTTTAG 2027 ||||||||| |||| ||||||||||| || || ||| | || | | ||| | ||||||| Sbjct 1698 TAGCCTCACTAACCCTCTAATGCAGAAGCTGAGGCACGTCCTCT-TCGACAAAGCTTTAG 1756 Query 2028 CGGATCCAGAACGCGAGGCCAATTCCGCGACATCGGTTTTCC-ACAAAATCGGAGCTTTT 2086 | || | ||| ||||| | | | ||| ||||||||| | ||||||||||| || Sbjct 1757 CTGAACTGGAAGGCGAGAC-A-----G--ACA-CGGTTTTCCGA-AAAATCGGAGCGTTC 1806 Query 2087 GAAGCCGAGCTGAAA-CTGCTTCTCCCTAAAGAAGTAGAACGCGTCCGGGTTGAATACGA 2145 ||||||||||||||| || || || ||||||||||| ||| | ||| || || ||||| Sbjct 1807 GAAGCCGAGCTGAAATCT-CTCCTTCCTAAAGAAGTGGAAAGAGTCAGGACAGAGTACGA 1865 Query 2146 GGAA-GGAACATCGGCTATAGCTAACCGGATTAAGGAA-TGTCGGTCTTATCCATTGTAT 2203 | || || ||||| | | |||||||| || ||| || ||||| || ||||| |||| Sbjct 1866 G-AACGGTACATCTAATGTGGCTAACCGAATCAAG-AAGTGTCGATCGTATCCGCTGTAC 1923 Query 2204 CGGTTTGTCCGCGATGAGCTAAATACTGAACT-GCTTACTGGAGAGAATGTTCGGTCGCC 2262 |||||||| || || || || | ||| | | ||| || ||||||||||| ||||| || Sbjct 1924 CGGTTTGTGCGAGACGAACTCGAGACT-AGGTTGCTAACCGGAGAGAATGTCCGGTCACC 1982 Query 2263 AGGAGAGGAGTTTGATAAAGTGTTCTTAGCGATTTCTGATGGAAAACTTATTGATCCGT- 2321 ||||||||| ||||| ||||| ||| |||||| ||| | || ||||| || || || | Sbjct 1983 AGGAGAGGATTTTGACAAAGTCTTCACAGCGATCTCTCAAGGCAAACTCATAGACCC-TC 2041 Query 2322 TGTTGGAATGTCTCAAGGAGTGGAACGGAGCTCCG 2356 |||| ||||||||||| |||||||||||||||||| Sbjct 2042 TGTTCGAATGTCTCAAAGAGTGGAACGGAGCTCCG 2076 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97434846710 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5