BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G10360.1
Length=3692
Score E
Sequences producing significant alignments: (Bits) Value
Ahg928725 jgi|Araly1|928725|scaffold_301182.1 5059 0.0
Ahg918705 jgi|Araly1|918705|Al_scaffold_0491_3 1930 0.0
Ahg478365 jgi|Araly1|478365|fgenesh2_kg.3__1066__AT3G10350.1 486 4e-136
Ahg481833 jgi|Araly1|481833|fgenesh2_kg.4__893__AT2G29140.1 326 9e-88
Ahg481838 jgi|Araly1|481838|fgenesh2_kg.4__898__AT2G29200.1 298 2e-79
> Ahg928725 jgi|Araly1|928725|scaffold_301182.1
Length=3063
Score = 5059 bits (2739), Expect = 0.0
Identities = 2957/3064 (97%), Gaps = 8/3064 (0%)
Strand=Plus/Plus
Query 267 TTGATTCGGATGAAGGGAAGAGATGGTTACTAATAGCTACATGGATACGCGATCAAATTT 326
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1 TTGATTCGGATGAAGGGAAGAGATGGTTACTGATAGCTACATGGATACGAGATCAAATTT 60
Query 327 GACAAGTGTGAATCGAGGATCCAATGTGGATCTCGAAGATCGATTCCAGAGGGAGCTCGA 386
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 61 GACAAGTGTGAATCGAGGATCCAATGTGGATCTCGAGGATCGATTCCAGAGGGAGCTCGA 120
Query 387 ATCTTTGCTCCAACAACATCGTAATCAGCAATCATTTGGCCGAGA-ACGAGAACGAGACA 445
|||||||||||||||||||||||||| |||| ||||||||||||| | ||||||||||||
Sbjct 121 ATCTTTGCTCCAACAACATCGTAATCGGCAAACATTTGGCCGAGAGA-GAGAACGAGACA 179
Query 446 TTGATGTTCACAGAAGCGGAAGCGCGCCTCCTACCGTGGAAGGATTGTTGAGAGCTATGG 505
|||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||
Sbjct 180 TTGATGTTCACAGAAGCGGAAGCGCGCCTCCTACGGTGGAAGGTTTGTTGAGGGCTATGG 239
Query 506 ATAATCAGTACTTGAACAATAACAACTCTGATCATAGAGATGTTGGGAATATTAGCAGTA 565
|||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||
Sbjct 240 ATAATCAGTACTGGAACAATAATAACTCTGATCATAGAGATGTTGGGAATGTTAACAGTT 299
Query 566 TAACCACTAGCAATGGCGTTGAGCTTTTATCTGATGATGAGTTACGTTGGCACCCTGAGT 625
| | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 300 TTAGCACTAGCAATGGCGTTGAGCTTTTGTCTGATGATGAGCTACGTTGGCACCCTGAGT 359
Query 626 ATCTCTCTTATTACTATTCGAATGAGCATTCGAATCCGAGGTTGCCTCCTCCGTTGTTGT 685
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 360 ATCTCTCTTATTACTATTCGAATGAACATTCCAATCCGAGGTTGCCTCCTCCGTTGTTGT 419
Query 686 CTAGAGAGGATTGGAGGGTTGCTCAGAGGTTTCACAACAGTGAGTCTGTGTTTGATCCTG 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 CTAGAGAGGATTGGAGGGTTGCTCAGAGGTTTCACAACAGTGAGTCTGTGTTTGATCCTG 479
Query 746 TTGGGGAATGGAGGAAGAAAACGGTTGAAGTCGACAACTCCTCATCGCTCTTCTCGGTTC 805
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 480 TTGGGGAATGGAGGAAGAAAGCGGTTGAAGTCGACAACTCCTCATCGCTCTTCTCGGTTC 539
Query 806 AGCCAGGGGTTCCAGTTGAGCAGGCAGAGAATGATTTGATGGAACTGAGGAATGCTGTAG 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 AGCCAGGGGTTCCAGTTGAGCAGGCAGAGAATGATTTGATGGAACTGAGGAATGCTGTAG 599
Query 866 CTCAGGGCCGCTCTCAGAAGGTGCAGCGGCTAGATCAAGGCAGAGAAGACTTGATTGGAT 925
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 600 CTCAGGGCCGCTCTCAGAAGGTGCAGCGGCTAGATCAAGGCAGAGAAGATTTTATTGGAT 659
Query 926 TATCTGGATATTCTGGGCTTGGACCGAGAAGGAAGAGTTTTGCTGATATACTTCAGGAAG 985
||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 660 TATCTGGATATCCTGGGCTTGGACCGAGAAGGAAGAGTTTCGCCGATATACTTCAGGAAG 719
Query 986 GACTTGAACGGGATGCAGCCTTAGGCAGCCAACTCTCTCGGCCTGCAAGCTGCAACACTT 1045
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 GACTTGAACGGGATGCAACCTTAGGCAGCCAACTCTCTCGGCCTGCAAGCTGCAACACTT 779
Query 1046 TTCGGGATATGAAAGATGCTGCTGTTTTATCAAATTTCAGTGCCGGTGGATTTGACAGCC 1105
||||||| ||||||||| ||||||||||||| ||||||||||| |||||||| |||||||
Sbjct 780 TTCGGGACATGAAAGATTCTGCTGTTTTATCGAATTTCAGTGCTGGTGGATTCGACAGCC 839
Query 1106 CATTAGCATTCCATGATTCATTACATTCTACTGCCAAAAACAGTCCAAATACTATGCTTG 1165
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 840 CATTAGCATTCCATGAATCATTACATGCTACTGCCAAAAACAGTCCAAATACTATGCTTG 899
Query 1166 GATCCACCATGAGTTCTCCGGTGCCAAGAAATAGAACTCCTGACTCACATCTAGTAGGAC 1225
| ||||||| |||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 900 GCTCCACCACGAGTTCCCCAGTGCCAAGAAATAGAACTCCTGACTCACATCTAGTAGGGC 959
Query 1226 GATCTACGGCCTCTGGCCTTCCCCCTATTGGTACCAGGGTTGGTCCTGTCGAGAAGAAGA 1285
||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 960 GATCTCCGGCCTCTGGCCTTCCCCCTATTGGTACCAGGGTCGGTCCTGTCGAGAAAAAGA 1019
Query 1286 ATACTTTTGGCACAGCCATCCAAAACTGTGAATCTTACACTGCTGCCGATGTTGCCGACA 1345
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1020 ATACTTTTGGCACAGCCATCCAAAACTCTGAATCTTACACTGCTGCCGATGTTGCCGACA 1079
Query 1346 CATTGTCCAGGTTGAACATGTCAGAGATGAGTCAAGTAAAAGAAAACCATATGCAGTCAC 1405
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 CATTGTCGAGGTTGAACATGTCAGAGATGAGTCAAGTAAAAGAAAACCATATGCAGTCAC 1139
Query 1406 AGCTTCAAGTGGAACTGGAGAATCAATCTGATGTCATGCGTTACATACCCAATGGTCATA 1465
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 AGCTTCAAGTGGAATTGGAGAATCAATCTGATGTCATGCGTTACATACCCAATGGTCATA 1199
Query 1466 AGAAGGCTTTGCGGCAACAAAATA---C---GGCAGAAACTAAAGATCACTTGTTTTCTG 1519
|||||||||||||||||||| ||| | ||||||| | |||||||||||||||||||
Sbjct 1200 AGAAGGCTTTGCGGCAACAAGATATTGCTATGGCAGAATCAAAAGATCACTTGTTTTCTG 1259
Query 1520 CAAATTATGGTGGAATGAGTGGGTATGGAGCAAGTCTTGGTGCTTCTACAGTGGGTTCCC 1579
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1260 CAAATTATGGTGGAATGAGTGGGTATGGAACAAGTCTTGGAGCTTCTACAGTGGGTTCCC 1319
Query 1580 ATGGACAGGTCAACATCCCTAAACGAACCTCCTCTTCAGCGAGTCTCTACTCAACTTCAG 1639
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1320 ATGGACAGGTCAACATCCCTAAACGAACCTCCTCTTCAGCGAGTCTTTACTCAACTTCAG 1379
Query 1640 ACCATTCTAGATTAGGAAGCGTGGGCTTATCTGATGTCAATATTAGGAATGGAAATATTA 1699
| |||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||
Sbjct 1380 AACATTCTAGATTAGGAAGCCTGGGCTTATCTGATGTCAATATTCGGAATGCAAATATTA 1439
Query 1700 ATGGAACAGACTTCTCCACAGCTGGTGGTTATATGGCAAAGAACAAGTTGAATTCATTAG 1759
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1440 ATGGAACAGACTTCTCCACAGCTGGTGGTTATTTGGCAAAGAACAAGTTGAATTCATTAG 1499
Query 1760 CTGAGCACTATTCCGCTGAAGGCTCACATTTGACTGGGGATGGGGATAGACAAAGCTTGA 1819
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 1500 CTGAGCACTATTCCGCTGAAGGCTCACATTTGTCTGGGGAAGGGGATAGACAAAGCTTGA 1559
Query 1820 ACAGATTGATAAATCAAGTTGCTTCTGAGCTTCACTCTCCAGTTATGGACCCACATTACA 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 ACAGATTGATAAATCAAGTTGCTTCTGAGCTTCACTCTCCAGTTATGGACCCACATTACA 1619
Query 1880 GCCAGTATCTGCATACGGCATCTTCTACTGCTGCCCCAATCGATCATTCTCTTATTAGAA 1939
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||
Sbjct 1620 GCCAGTATCTGCATACGGCATCTTCTACTGCTGCACCAACCGATCATTCTCTTATGAGAA 1679
Query 1940 ACAATTTCGGGACTTCAAACGGAGATACGGCTAACGAATACCTCGCGATGTTACTTGCTC 1999
||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1680 ACAATTTTGGGACTTCAAACGGAGATACGGCTAATGAATACCTTGCGATGTTACTTGCTC 1739
Query 2000 AAAACAGGCAACAGCTGGGTAACCTCAATGCTGCAAATTCTAGATTTTTTGAGAGTCCTT 2059
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1740 AAAACAGGCAACAGCTGGGTAACCTCAGTGCTGCAAATTCTAGATTTTTTGAGAGTCCTT 1799
Query 2060 CATATGATCTTGGCAACATGTATCTAGGAAACCATTTGCCTTCTCCTTCCAAGAATTCAA 2119
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 1800 CATATGATCTTGGCAACATTTATCTAGGAAACCATTTGCCTTCTCCTTCCAAGAATGCAA 1859
Query 2120 GAAATTTCCAGAACATGCGTATGTCACAATCTGCCTCAATGATGAAAGTTCCTTTCGGAG 2179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1860 GAAATTTCCAGAACATGCGTATGTCACAATCTGCCTCAATGATGAAAGTTCCATTCGGAG 1919
Query 2180 GCTTACAGGGATCATCCCATGTAGATATTGGCAGTACGGCAGAAGCATCCTTACTAGAGG 2239
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1920 GCTTACAGGGATCATCCCATGTAGATATTGGCAGCACGGCAGACGCATCCTTACTAGAGG 1979
Query 2240 GGTTTAAGAACAACAAGACAAGGTCTTTGGAGCTTTCAGAAATAGTTGGTCATGTGATTG 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1980 GGTTTAAGAACAACAAGACAAGGTCTTTGGAGCTTTCAGAAATAGTTGGTCATGTGATTG 2039
Query 2300 AGTTCAGCATGGATCAGTACGGAAGTCGTTTCATTCAACAGAAACTTGAGACTGCAACGG 2359
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2040 AGTTCAGCATGGATCAGTACGGAAGTCGTTTCATTCAGCAGAAACTTGAGACTGCAACGG 2099
Query 2360 ATGAGGAAAAGAATGCAATATTCCCTGAGATACTTCCTTACGGCCGTACTTTAATGACAG 2419
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2100 ATGAGGAAAAGAATGCTATATTCCCTGAGATACTTCCTTACGGCCGCACTTTAATGACAG 2159
Query 2420 ATGTCTTTGGAAATTATGTCATTCAAAAGTTTTTTGAACATGGTACAACCAAGCAGAGAA 2479
||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||
Sbjct 2160 ATGTCTTTGGAAATTATGTTATTCAAAAGTTTTTTGAGCATGGTACAAACAAGCAGAGAA 2219
Query 2480 AAGAACTCGCTGAACAAGTAACAGGCCACGTTTTGGCTCTTTCTCTACAAATGTACGGCT 2539
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 2220 AAGAACTCGCTGAACAAGTAACAGGCCATGTTTTGGCTCTTTCTCTACAAATGTATGGCT 2279
Query 2540 GCAGGGTTATCCAAAAGGCGTTAGAGGTGGTTGAATTGGAGCAGCAAGCTCGAATGGTGA 2599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2280 GCAGGGTTATCCAAAAGGCGTTAGAGGTGGTTGAATTGGAGCAGCAAGCTCGAATGGTGC 2339
Query 2600 AAGAGCTTGATGGGTCTGTCATGAAATGCGTTCATGACCAGAACGGTAATCATGTGATCC 2659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 AAGAGCTTGATGGGTCTGTCATGAAATGCGTTCATGACCAGAACGGTAATCATGTGATCC 2399
Query 2660 AGAAGTGTATAGAGCGTCTTCCTCAGGATTGGATACAGTTCATCATTTCCTCATTCTACG 2719
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2400 AGAAGTGTATAGAGCGTCTTCCTCAGGATTGGATACAGTTCATCATTTCTTCATTCTACG 2459
Query 2720 GAAAAGTTTTAGCTCTTTCAACACACCCTTATGGATGCCGTGTAATCCAGAGGGTACTGG 2779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2460 GAAAAGTTTTAGCTCTTTCAACACACCCTTATGGATGCCGTGTAATCCAGAGGGTACTGG 2519
Query 2780 AGCATATTGATGATATAGAAACCCAACGGATCATTATGGAGGAAATCATGGATTCAGTCT 2839
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2520 AGCATATTGATGACATAGAAACCCAACGGATCATTATGGAGGAAATCATGGATTCAGTCT 2579
Query 2840 GTACTCTAGCACAAGATCAATACGGAAATTATGTTATCCAGCATATCATACAACATGGTA 2899
||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||
Sbjct 2580 GTACTCTAGCACAAGATCAGTACGGTAATTATGTTATTCAGCATATCATACAACACGGTA 2639
Query 2900 AACCTCATGAACGGTCAGAAATTATCAATAAGCTTGCTGGACAGATTGTGAAGATGAGTC 2959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2640 AACCTCATGAACGGTCAGAAATTATCAATAAGCTTGCTGGACAGATTGTGAAGATGAGTC 2699
Query 2960 AGCAAAAGTTTGCTTCTAATGTTGTTGAAAAGTGCCTAACATTTGGCGGTCCAGAGGAAC 3019
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2700 AGCAAAAGTTTGCTTCTAATGTTGTTGAAAAGTGCTTAACATTTGGCGGTCCAGAGGAAC 2759
Query 3020 GTCAGGTTCTAGTGAATGAGATGCTTGGTTATACTGATGAAAACGAGCCTCTTCAGGCGA 3079
| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2760 GCCAGGTACTAGTGAATGAGATGCTTGGTTATACTGATGAGAACGAGCCTCTTCAGGCGA 2819
Query 3080 TGATGAAGGACCCATTTGGGAACTATGTAGTGCAGAAGGTTCTTGAAACATGTGATGATC 3139
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 2820 TGATGAAGGACCCATTTGGGAACTACGTAGTGCAGAAGGTTCTTGAAACATGCGATGATC 2879
Query 3140 AAAGTCTTGCACTCATTCTTTCTCGCATCAAAGTACACTTGAATGCCTTGAAGAGATACA 3199
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2880 AAAGTCTTGCACTCATTCTTTCTCGCATCAAAGTACATTTGAATGCCTTGAAGAGATACA 2939
Query 3200 CATATGGGAAACACATCGTTGCCCGGGTTGAGAAGCTTATCACTACTGGAGAGAGAAGAA 3259
||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 2940 CATATGGGAAACATATCGTTGCCCGGGTTGAGAAACTTATCACTACCGGAGAGAGAAGAA 2999
Query 3260 TCGGACTCTCGTCATCTCTTGCCGCGAACACCACTCCATAACCATCTCTGAGTAAGTAAA 3319
|||| |||||||||||||||||||| ||| | ||||| ||||||||||||||||||||||
Sbjct 3000 TCGGGCTCTCGTCATCTCTTGCCGCAAACGCTACTCCTTAACCATCTCTGAGTAAGTAAA 3059
Query 3320 ACCT 3323
||||
Sbjct 3060 ACCT 3063
> Ahg918705 jgi|Araly1|918705|Al_scaffold_0491_3
Length=1209
Score = 1930 bits (1045), Expect = 0.0
Identities = 1150/1202 (96%), Gaps = 2/1202 (0%)
Strand=Plus/Plus
Query 289 ATGGTTACTAATAGCTACATGGATACGCGATCAAATTTGACAAGTGTGAATCGAGGATCC 348
||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTGACTGATAGCTACATGGATACGAGATCAAATTTGACAAGTGTGAATCGAGGATCC 60
Query 349 AATGTGGATCTCGAAGATCGATTCCAGAGGGAGCTCGAATCTTTGCTCCAACAACATCGT 408
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AATGTGGATCTCGAGGATCGATTCCAGAGGGAGCTCGAATCTTTGCTCCAACAACATCGT 120
Query 409 AATCAGCAATCATTTGGCCGAGA-ACGAGAACGAGACATTGATGTTCACAGAAGCGGAAG 467
|||| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 121 AATCGGCAAACATTTGGCCGAGAGA-GAGAACGAGACATTGATGTTCACAGAAGCGGAAG 179
Query 468 CGCGCCTCCTACCGTGGAAGGATTGTTGAGAGCTATGGATAATCAGTACTTGAACAATAA 527
|||||||||||| |||||||| |||||||| ||||||||||||||||||| |||||||||
Sbjct 180 CGCGCCTCCTACGGTGGAAGGTTTGTTGAGGGCTATGGATAATCAGTACTGGAACAATAA 239
Query 528 CAACTCTGATCATAGAGATGTTGGGAATATTAGCAGTATAACCACTAGCAATGGCGTTGA 587
||||||||||||||||||||||||||| ||| |||| | | ||||||||||||||||||
Sbjct 240 TAACTCTGATCATAGAGATGTTGGGAATGTTAACAGTTTTAGCACTAGCAATGGCGTTGA 299
Query 588 GCTTTTATCTGATGATGAGTTACGTTGGCACCCTGAGTATCTCTCTTATTACTATTCGAA 647
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 300 GCTTTTGTCTGATGATGAGCTACGTTGGCACCCTGAGTATCTCTCTTATTACTATTCGAA 359
Query 648 TGAGCATTCGAATCCGAGGTTGCCTCCTCCGTTGTTGTCTAGAGAGGATTGGAGGGTTGC 707
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TGAACATTCCAATCCGAGGTTGCCTCCTCCGTTGTTGTCTAGAGAGGATTGGAGGGTTGC 419
Query 708 TCAGAGGTTTCACAACAGTGAGTCTGTGTTTGATCCTGTTGGGGAATGGAGGAAGAAAAC 767
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 420 TCAGAGGTTTCACAACAGTGAGTCTGTGTTTGATCCTGTTGGGGAATGGAGGAAGAAAGC 479
Query 768 GGTTGAAGTCGACAACTCCTCATCGCTCTTCTCGGTTCAGCCAGGGGTTCCAGTTGAGCA 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 GGTTGAAGTCGACAACTCCTCATCGCTCTTCTCGGTTCAGCCAGGGGTTCCAGTTGAGCA 539
Query 828 GGCAGAGAATGATTTGATGGAACTGAGGAATGCTGTAGCTCAGGGCCGCTCTCAGAAGGT 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GGCAGAGAATGATTTGATGGAACTGAGGAATGCTGTAGCTCAGGGCCGCTCTCAGAAGGT 599
Query 888 GCAGCGGCTAGATCAAGGCAGAGAAGACTTGATTGGATTATCTGGATATTCTGGGCTTGG 947
||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||
Sbjct 600 GCAGCGGCTAGATCAAGGCAGAGAAGATTTTATTGGATTATCTGGATATCCTGGGCTTGG 659
Query 948 ACCGAGAAGGAAGAGTTTTGCTGATATACTTCAGGAAGGACTTGAACGGGATGCAGCCTT 1007
|||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||
Sbjct 660 ACCGAGAAGGAAGAGTTTCGCCGATATACTTCAGGAAGGACTTGAACGGGATGCAACCTT 719
Query 1008 AGGCAGCCAACTCTCTCGGCCTGCAAGCTGCAACACTTTTCGGGATATGAAAGATGCTGC 1067
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 720 AGGCAGCCAACTCTCTCGGCCTGCAAGCTGCAACACTTTTCGGGACATGAAAGATTCTGC 779
Query 1068 TGTTTTATCAAATTTCAGTGCCGGTGGATTTGACAGCCCATTAGCATTCCATGATTCATT 1127
||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct 780 TGTTTTATCGAATTTCAGTGCTGGTGGATTCGACAGCCCATTAGCATTCCATGAATCATT 839
Query 1128 ACATTCTACTGCCAAAAACAGTCCAAATACTATGCTTGGATCCACCATGAGTTCTCCGGT 1187
|||| |||||||||||||||||||||||||||||||||| ||||||| |||||| || ||
Sbjct 840 ACATGCTACTGCCAAAAACAGTCCAAATACTATGCTTGGCTCCACCACGAGTTCCCCAGT 899
Query 1188 GCCAAGAAATAGAACTCCTGACTCACATCTAGTAGGACGATCTACGGCCTCTGGCCTTCC 1247
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 900 GCCAAGAAATAGAACTCCTGACTCACATCTAGTAGGGCGATCTCCGGCCTCTGGCCTTCC 959
Query 1248 CCCTATTGGTACCAGGGTTGGTCCTGTCGAGAAGAAGAATACTTTTGGCACAGCCATCCA 1307
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 960 CCCTATTGGTACCAGGGTCGGTCCTGTCGAGAAAAAGAATACTTTTGGCACAGCCATCCA 1019
Query 1308 AAACTGTGAATCTTACACTGCTGCCGATGTTGCCGACACATTGTCCAGGTTGAACATGTC 1367
||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 1020 AAACTCTGAATCTTACACTGCTGCCGATGTTGCCGACACATTGTCGAGGTTGAGCATGTC 1079
Query 1368 AGAGATGAGTCAAGTAAAAGAAAACCATATGCAGTCACAGCTTCAAGTGGAACTGGAGAA 1427
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1080 AGAGATGAGTCAAGTAAAAGCCCACCATATGCAGTCACAGCTTCAAGTGGAATTGGAGAA 1139
Query 1428 TCAATCTGATGTCATGCGTTACATACCCAATGGTCATAAGAAGGCTTTGCGGCAACAAAA 1487
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1140 TCAATCTGATGTCATGCGTTACATACCCAATGGTCATAAGAAGGCTTTGCGGCAACAAGA 1199
Query 1488 TA 1489
||
Sbjct 1200 TA 1201
> Ahg478365 jgi|Araly1|478365|fgenesh2_kg.3__1066__AT3G10350.1
Length=1861
Score = 486 bits (263), Expect = 4e-136
Identities = 362/403 (90%), Gaps = 33/403 (8%)
Strand=Plus/Minus
Query 3292 ACTCCATAACCATCTCTGAGTAAGTAAAACCTCAAGCTTCTTAACTTATAACACAACCTG 3351
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 1861 ACTCCTTAACCATCTCTGAGTAAGTAAAACCTCAAGCTTCTTAATTTATAACACAACCAG 1802
Query 3352 AG-AAGAGGTACAAGTTGATGACCGAGAGCTATTTGTACAGCCTAACTAAGCAAAGCATC 3410
|| |||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1801 AGAAAGAGG--C----TGATGACCGAGAGCTATTTGTACAGCCTAACTAAGCAAAGCATC 1748
Query 3411 TCAAGATGGTTCCTGTTATATATATTTTGCAAATAATTTGTAAATAAAATAGAGGGTTTT 3470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1747 TCAAGATGGTTCCTGTTATATATATTTTGCAAATAATTTGTAAATAAAATAGAGGGTTTT 1688
Query 3471 AGATTTAAGTCAGTAAATAAATGTATTTTGGATCCCAACTGGCTTAAATCAAAAATCTCC 3530
||||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1687 AGATTTAAGTCGGT-AATAAATGTATTTTGGATCTCAACTGGCTTAAATTAAAAATCTCC 1629
Query 3531 TTTTGGTTGTGTAAAAGGTGAAGCCTTGCTGTTTTATTTATGTAAAGCAATGGCTTACTT 3590
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 TTTTGGTTGTGTAAAAGGTGAAGCCTTGCTGTTTTATTTATGTAAAGCAATGGCTTA--- 1572
Query 3591 TTAGGTCTTATTCTTCACATTACGATGTAAATATCTTGCGGCTTTGCTCCCCAAGAATTG 3650
| | | | || | | | | | ||||||||||||||||||||||||||||||
Sbjct 1571 --A--T-T-A--CT--A--T---G-T--ACATATCTTGCGGCTTTGCTCCCCAAGAATTG 1530
Query 3651 CTATATTTTTTATTTTAAAAGCT-CTAAAGTTTTACACTGAAC 3692
|||||||||| |||||||||| | ||||||||||| | |||||
Sbjct 1529 CTATATTTTT-ATTTTAAAAG-TACTAAAGTTTTA-ATTGAAC 1490
> Ahg481833 jgi|Araly1|481833|fgenesh2_kg.4__893__AT2G29140.1
Length=3260
Score = 326 bits (176), Expect = 9e-88
Identities = 758/1029 (74%), Gaps = 80/1029 (8%)
Strand=Plus/Plus
Query 2272 CTTTCAGAAATAGTTGGTCATG-TGATTGAGTTCAGCAT-GGATCAGTACGGAAGTC-GT 2328
||||| ||||||| ||| |||| || | |||||||| | |||||| ||||| || | ||
Sbjct 1897 CTTTCTGAAATAGCTGGCCATGTTG-TAGAGTTCAG-TTCGGATCAATACGGGAGCCGGT 1954
Query 2329 TTCATTCAACAGAAACTTGAGACTG---CAACGGATGAGGAAAAGA-ATGCAATATTCCC 2384
|| ||||| |||||||| ||||| | |||| ||||| ||||| | ||| || |
Sbjct 1955 TT-ATTCAGCAGAAACTCGAGACAGCAACAACTGATGA-GAAAA-ACATGGTTTA-T-GA 2009
Query 2385 TGAGATAC-TTCCTTAC-GGC-CGTA-CTTTAATGACAGATGTCTTTGGAAATTATGTCA 2440
||||| | | || || || | || | | ||||| || || |||||||| ||||| |
Sbjct 2010 GGAGAT-CATGCC--ACAAGCTC-TAGCCCTGATGACTGACGTTTTTGGAAACTATGTGA 2065
Query 2441 TTCAAAAGTTTTTTGAACATGGTACAACCA--AGCAGAGAAAAGAACT-CGCTGA-ACAA 2496
|||| ||||| ||||| ||||| || ||| | ||||| | |||| | || || | ||
Sbjct 2066 TTCAGAAGTTCTTTGAGCATGG-ACTCCCACCA-CAGAGGAGAGAATTGGGC-GAGA-AA 2121
Query 2497 GTAACAGGCCACGTTTTGGCTCTT-TCTCTACAAATGTACGGCTG-CAGGGTTATCCAAA 2554
| | | | | |||||| ||||| || |||| ||||| || || | | || ||||| |
Sbjct 2122 CTCATTGACAATGTTTTGCCTCTTAGCT-TACAGATGTATGGTTGTC-GTGTCATCCAGA 2179
Query 2555 AGGC-GTTAGAGGTGGTTGAAT-TGGAGCAGCAAGCTCGAATGGTGAAAGAGCTTGATGG 2612
|||| || |||||||||| || | || ||| || | |||||||||||| |||||| |
Sbjct 2180 AGGCAATT-GAGGTGGTTG-ATCTAGACCAGAAAATTAAAATGGTGAAAGAACTTGAT-G 2236
Query 2613 GTC-TGTCATGAAATGCGTTCATGACCAGAACGGTAATCATGTGATCCAGAAGTGTATAG 2671
| | ||| ||| ||| || | ||| ||||| || || |||||| | || |||||||| |
Sbjct 2237 GACATGTGATGCGATGTGTACGTGATCAGAATGGGAACCATGTGGTTCAAAAGTGTATCG 2296
Query 2672 AGCGTCTTCCTCAGGATTGGATAC-AGTTCATCATTTCCTCATTCTACGGAAAAGT-TTT 2729
| || | ||| |||| || | |||| || ||||| | |||| || | || |
Sbjct 2297 AATGTGTGCCTGAGGAAAACAT-CGAGTTTATTATTTCGACTTTCTTTGGCCATGTGGTG 2355
Query 2730 AGCTCTTTCAACACACCCTTATGGATGCCGTGTAATCCAGAGGGTACTGGAGCATATTG- 2788
| | || || || ||||| || || |||||||| || ||||| ||| |||| | | ||
Sbjct 2356 A-CCCTCTCCACTCACCCATACGGGTGCCGTGTTATTCAGAGAGTATTGGA--ACACTGC 2412
Query 2789 -ATGA-TATAGAAACCCA-ACGGATCATTATGGAGGAAATCATGGATT-CAGTCT-GTAC 2843
|||| | || || || | | | ||||||| |||||| | |||| | || | |||
Sbjct 2413 CATGACCCT-GATACACAGA-GTAAGGTTATGGATGAAATC-TTGATTACTGT-TAGTA- 2467
Query 2844 T-CTAGCACAAGATCAATACGGAAATTATGTTATCCAGCATAT-CATACAACATGGTAAA 2901
| || || |||||||| || ||||| |||||||| |||||| | | | | ||||| |||
Sbjct 2468 TGCTGGCCCAAGATCAGTATGGAAACTATGTTATTCAGCATGTGC-TGGAGCATGG-AAA 2525
Query 2902 -CCTCATGAACGGTCAGAAATTATCAATA-AGCTT-GCTGGACAGATTGTGAAGATGAGT 2958
||| |||| || | | || ||||| | || || |||||| ||||||| |||||||
Sbjct 2526 GCCTGATGAGCGCACCGTGATAATCAA-AGAG-TTAGCTGGAAAGATTGTTCAGATGAGC 2583
Query 2959 CAGCAAAAGTTTGCTTCTAATGTTGTTGA-AAAGTGCCTAACATTTGGCGGTCCAGAGGA 3017
||||| |||||||| || || |||||||| ||| || | || ||||| ||||| |||||
Sbjct 2584 CAGCAGAAGTTTGCATCAAACGTTGTTGAGAAA-TGTTTGACTTTTGGAGGTCCTGAGGA 2642
Query 3018 ACGTCAGGTTCTAGTGAATGAGATGCTTGGTTA-TACTGATGAAAACGAGCCTCTTCAGG 3076
||| | |||| ||||||||||||| ||| | |||||||||||||||||||||||||
Sbjct 2643 ACGGGAATTTCTGGTGAATGAGATGC-TGGGCACAACTGATGAAAACGAGCCTCTTCAGG 2701
Query 3077 CGATGATGAAGGACCCA-TTTGGGAACTATGTAGTGCAGAAGGTTCTTGAAACATGTGAT 3135
||||||||||||| | | |||| |||||||||||||| || || ||||| ||||| |||
Sbjct 2702 CGATGATGAAGGATC-AGTTTGCAAACTATGTAGTGCAAAAAGTCCTTGAGACATGCGAT 2760
Query 3136 GATCAA-AGTCTTGCACTCATTCTTTCTCGCATCAAAGTACA-CTTGAATGCCTTGAAGA 3193
|| ||| || | || ||| || ||| |||| || || || || ||| ||||| |||||||
Sbjct 2761 GACCAACAG-CGTGAACTGATACTTACTCGTATTAAGGTGCATCTT-AATGCTTTGAAGA 2818
Query 3194 -GATACACATATGGGAAA-CACATCGTTGCCCGGGTTGAGAAGCTTATCACTACTGGAGA 3251
| ||||| ||||| ||| || ||||||||||| ||||| || || | || |||||||
Sbjct 2819 AG-TACACTTATGG-AAAGCATATCGTTGCCCGTGTTGAAAAACTCGTTGCTGCTGGAGA 2876
Query 3252 GAGAAGAAT 3260
||| |||||
Sbjct 2877 GAGGAGAAT 2885
> Ahg481838 jgi|Araly1|481838|fgenesh2_kg.4__898__AT2G29200.1
Length=3108
Score = 298 bits (161), Expect = 2e-79
Identities = 770/1053 (73%), Gaps = 86/1053 (8%)
Strand=Plus/Plus
Query 2251 AACAAGACAAG-GTCTTTGGAGCTTTCAGAAATAGTTGGTCATG-TGATTGAGTTCAGCA 2308
||||| ||||| | ||| || || || ||||||| ||| |||| || | ||||||||
Sbjct 1864 AACAAAACAAGAGGATTT-GAACTCTCTGAAATAGCTGGCCATGTTG-TAGAGTTCAG-T 1920
Query 2309 T-GGATCAGTACGGAAGTC-GTTTCATTCAACAGAAACTTGAGACTG---CAACGGATGA 2363
| |||||| || ||||| | |||| ||||| |||||||| ||||| | |||| |||||
Sbjct 1921 TCGGATCAATATGGAAGCCGGTTT-ATTCAGCAGAAACTCGAGACAGCAACAACTGATGA 1979
Query 2364 GGAAAAGA-ATGCAATATTCCCTGAGATAC-TTCCTTAC-GGC-CGTACTTTAATGACAG 2419
||||| | ||| || | ||||| | | || || || | | | | ||||| |
Sbjct 1980 -GAAAA-ACATGGTTTA-T-GAGGAGAT-CATGCC--ACATGCTCATGCCCTGATGACTG 2032
Query 2420 ATGTCTTTGGAAATTATGTCATTCAAAAGTTTTTTGAACATGGTAC-AAC-CAAGCAGAG 2477
| || |||||||| ||||| ||||| ||||| ||||| ||||| || | | | |||||
Sbjct 2033 ACGTTTTTGGAAACTATGTGATTCAGAAGTTCTTTGAGCATGG-ACTCCCGCCA-CAGAG 2090
Query 2478 AAAAGAACTCGCTGA-ACAAGTAACAGGCCACGTTTTGGCTCTT-TCTCTACAAATGTAC 2535
|| |||| | || || | || | | | | |||||| ||||| || |||| |||||
Sbjct 2091 AAGAGAATTGGCAGAGA-AACTCTTTGACAATGTTTTGCCTCTTAGCT-TACAGATGTAT 2148
Query 2536 GGCTG-CAGGGTTATCCAAAAGGC-GTTAGAGGTGGTTGAAT-TGGAGCAGCAAGCTCGA 2592
|| || | | || ||||| ||||| || |||||||||| || | || ||| || | |
Sbjct 2149 GGTTGTC-GTGTCATCCAGAAGGCAATT-GAGGTGGTTG-ATCTAGACCAGAAAATTAAA 2205
Query 2593 ATGGTGAAAGAGCTTGATGGGTC-TGTCATGAAATGCGTTCATGACCAGAACGGTAATCA 2651
||||||||||| |||||| || | ||| ||| ||| || | ||| ||||| || |||||
Sbjct 2206 ATGGTGAAAGAACTTGAT-GGACATGTGATGCGATGTGTACGTGATCAGAATGGGAATCA 2264
Query 2652 TGTGATCCAGAAGTGTATAGAGCGTCTTCCTCAGGATTGGATAC-AGTTCATCATTTCCT 2710
|||| | || |||||||| || || | ||| | || || | |||| || |||||
Sbjct 2265 TGTGGTTCAAAAGTGTATCGAATGTGTGCCTGAAGAAAACAT-CGAGTTTATTATTTCAA 2323
Query 2711 CATTCTACGGAAAAGT-TTTAGCTCTTTCAACACACCCTTATGGATGCCGTGTAATCCAG 2769
| |||| || | || | | | || || || ||||| || || ||||||||||| |||
Sbjct 2324 CTTTCTTTGGTCATGTGGTGA-CCCTCTCCACTCACCCATACGGGTGCCGTGTAATTCAG 2382
Query 2770 AGGGTACTGGAGCATATTG--ATGA-TATAGAAACCCA-ACGGATCATTATGGAGGAAAT 2825
|| ||| |||| | | || |||| | || || || | | | ||||||| |||||
Sbjct 2383 AGAGTATTGGA--ACACTGCCATGACCCT-GATACTCAGA-GTAAGGTTATGGAAGAAAT 2438
Query 2826 CATGGATT-CA--GTCT-GTACT-CTAGCACAAGATCAATACGGAAATTATGTTATCCAG 2880
| | || || || | ||| | || || |||||||| |||||||| |||||| | |||
Sbjct 2439 CCT---TTCCACTGT-TAGTA-TGCTGGCCCAAGATCAGTACGGAAACTATGTTGTTCAG 2493
Query 2881 CATAT-CATACAACATGGTAAA-CCTCATGAACGGTCAGAAATTATCAATA-AGCTT-GC 2936
||| | | | | ||||| ||| ||| |||| || | | || ||||| | || || ||
Sbjct 2494 CATGTGC-TGGAGCATGG-AAAGCCTGATGAGCGCACTGTGATAATCAA-AGAG-TTGGC 2549
Query 2937 -TGGACAGATTGTGAAGATGAGTCAGCAAAAGTTTGCTTCTAATGTTGTTGA-AAAGTGC 2994
||| ||||||| ||||||| ||||| |||||||| || || |||||||| ||| ||
Sbjct 2550 GGGGA-AGATTGTTCAGATGAGCCAGCAGAAGTTTGCATCAAACGTTGTTGAGAAA-TGT 2607
Query 2995 CTAACATTTGGCGGTCCAGAGGAACGTCAGGTTCTAGTGAATGAGATGCTTGGTTA-TAC 3053
| || ||||| ||||| |||||||| | |||| ||||||||||||| ||| | ||
Sbjct 2608 TTGACTTTTGGAGGTCCTGAGGAACGGGAATTTCTGGTGAATGAGATGC-TGGGCACAAC 2666
Query 3054 TGATGAAAACGAGCCTCTTCAGGCGATGATGAAGGACCCA-TTTGGGAACTATGTAGTGC 3112
|||||||||||||||||||||||||||||||||||| | | |||| |||||||||||||
Sbjct 2667 TGATGAAAACGAGCCTCTTCAGGCGATGATGAAGGATC-AGTTTGCAAACTATGTAGTGC 2725
Query 3113 AGAAGGTTCTTGAA-ACATGTGATGATCAA-AGTCTTGCA-CTCATTCTTTCTCGCATCA 3169
|||| ||| ||| | ||||||||||| ||| | | || | || || ||| |||||||||
Sbjct 2726 AGAAAGTT-TTGGAGACATGTGATGACCAACAA-CGTG-AGCTGATACTTACTCGCATCA 2782
Query 3170 AAGTACA-CTTGAATGCCTTGAAGAGATACACATATGGGAAA-CACATCGTTGCCCGGGT 3227
|||| || ||| ||||| || |||| |||||| ||||| ||| || ||||||| || |
Sbjct 2783 AAGTGCATCTT-AATGCTTTAAAGAAATACACTTATGG-AAAGCATGTCGTTGCGCGTAT 2840
Query 3228 TGAGAAGCTTATCACTACTGGAGAGAGAAGAAT 3260
||| || || | || |||||||||| |||||
Sbjct 2841 TGAAAAACTCGTTGCTGCTGGAGAGAGGAGAAT 2873
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 139481005045
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5