BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G10450.1
Length=1518
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478377 jgi|Araly1|478377|fgenesh2_kg.3__1078__AT3G10450.1 2211 0.0
Ahg476459 jgi|Araly1|476459|fgenesh2_kg.2__1589__AT1G73270.1 1092 0.0
Ahg481161 jgi|Araly1|481161|fgenesh2_kg.4__221__AT2G22970.3 902 0.0
Ahg478582 jgi|Araly1|478582|fgenesh2_kg.3__1283__AT3G12220.1 220 2e-56
> Ahg478377 jgi|Araly1|478377|fgenesh2_kg.3__1078__AT3G10450.1
Length=1332
Score = 2211 bits (1197), Expect = 0.0
Identities = 1287/1332 (97%), Gaps = 0/1332 (0%)
Strand=Plus/Plus
Query 13 AAACGAATGGCTAACGACTACGTTTCCACTGTTCTGCTTCTTCTTAGCCTCCTTATCTTC 72
|||||||||||| |||||||||||||| |||| ||||||||||||| ||||||||||||
Sbjct 1 AAACGAATGGCTCACGACTACGTTTCCTCTGTACTGCTTCTTCTTATTCTCCTTATCTTC 60
Query 73 TTGAGTCAGCGTACTGATTCTGCCTCTATCGTCAAGTCTCTTCCTGGTTTTGATGGCCCT 132
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTGAGTCAGCGTACTGTTTCTTCCTCTATCGTCAAGTCTCTTCCTGGTTTTGATGGCCCT 120
Query 133 CTTCCCTTTGAACTCGAAACCGGGTATATTGGTGTTGGTGAGGAAGAGGAAGTGCAGTTG 192
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 121 CTTCCCTTTGAGCTCGAAACCGGGTATATTGGTGTTGGTAAGGAAGAGGAAGTGCAGTTG 180
Query 193 TTTTACTACTTTATCAAGTCTGAGAGGAATCCACAAGAAGATCCTCTTCTACTCTGGTTA 252
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 181 TTTTACTACTTTATCAAGTCTGAGAGGAGTCCACAAGAAGATCCTCTTCTTCTCTGGTTA 240
Query 253 AGTGGAGGACCTGGTTGCTCTTCTATCTCTGGTCTTCTTTACGAGAATGGGCCTGTGAAT 312
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 241 AGTGGAGGACCTGGTTGCTCTTCTATCTCTGGTCTTCTTTACGAGAATGGGCCTGTGACT 300
Query 313 GTGAAGATTGAGGTTTACAATGGAACTCTTCCTTCCTTGGTCTCTACTACATATTCATGG 372
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 301 GTGAAGCTTGAGGTTTACAATGGAACTCTTCCTTCCTTGGTCTCTACTACATATTCGTGG 360
Query 373 ACTAAGGTTTCGAGTATAATATATTTGGATCAGCCTGTTGGAACTGGCTTCTCCTACTCA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 361 ACTAAGGTTTCGAGTATAATATATTTGGATCAGCCTGTTGGAACTGGCTTCTCTTACTCA 420
Query 433 AGAACTAAACTTGTTAACAAACCCAGTGATTCAGGAGAAGCCAAGAGAATCCACGAGTTT 492
|||||| |||||| ||| ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct 421 AGAACTCAACTTGCTAATAAACCAAGTGATTCAGGAGAAGCCAAGAGGATCCATGAGTTT 480
Query 493 CTTCACAAGTGGCTAGGCAAGCATCAAGAGTTTTCCTCCAACCCTTTCTATGTCGGTGGG 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CTTCACAAGTGGCTAGGCAAGCATCAAGAGTTTTCCTCCAACCCTTTCTATGTCGGTGGG 540
Query 553 GATTCTTATTGTGGTATGGTCATTCCGGCACTCGTTCAAGAAATCTCAAAAGGAAACTAT 612
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GATTCTTATTGCGGTATGGTCATTCCGGCACTCGTTCAAGAAATCTCAAAAGGAAACTAT 600
Query 613 GTATGCTGCAAACCTCCAATAAATCTTCAGGGCTATATTCTTGGAAACCCATCAACAGAA 672
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 601 GTATGCTGCAAACCTCCAATAAATCTTCAGGGCTATATCCTCGGAAACCCATCAACAGAA 660
Query 673 AATGAAGTTGATATTAATTATCGCATTCCATATGCTCATGGAATGGCACTGATCTCTGAT 732
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AATGAAGTTGATATTAGTTATCGCATTCCATATGCTCATGGAATGGCACTGATCTCTGAT 720
Query 733 GAACTCTATGAGTCAATGAAGAGAATCTGCAAAGGAAAATATGAAAATGTTGATCCACGT 792
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 GAACTCTACGAGTCACTGAAGAGAATCTGCAAAGGAAAATATGAAAATGTTGATCCACGT 780
Query 793 AACACAAAATGCTTGAAACTCGTTGGAGAATATCAGAAGTGCACTAAAAGAATAAACAAA 852
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 781 AACACAAAATGCTTGAAACTCGTTGGAGAATATCAGAAGTGCATTAATAGAATAAACAAA 840
Query 853 GCACTTATAATAACGCCAGAGTGTGTAGACACATCTCCTGATTGCTATATGTATCGGTAT 912
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 841 GCACTTATAATAACGCCAGAGTGTGTAGAAACATCTCCTGATTGCTATATGTATCGGTAT 900
Query 913 TTGTTAACTACCTACTGGGCCAATGATGAGAATGTGCAAAGAGCTCTTCATGTCAATAAG 972
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 901 TTGTTAACTACCTACTGGGCCAATGATGAGAGTGTGCAAAGAGCTCTTCATGTCAATAAG 960
Query 973 GGGAGTATAGGGGAATGGGTACGTTGTTATTTTGAGATACCTTACAATCATGACATTAAA 1032
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 961 GGGAGTATAGGGGAATGGGTACGTTGTTATCGGGAGATACCTTACAATCATGACATTAAA 1020
Query 1033 AGCAGTGTACCGTACCACATGAATAACAGCATCGATGGATATGCATCTCTCATCTTCAGT 1092
||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||
Sbjct 1021 AGCAGTGTACCGTACCATATGAATAACAGCATCGATGGCTATCCTTCTCTCATCTTCAGT 1080
Query 1093 GGTGATCACGACATGGAAGTACCTTACCTTGGAACTCAAGCTTGGATTAGGTCTCTTAAT 1152
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 GGGGATCACGACATGGAAGTACCTTACCTTGGAACTCAAGCTTGGATTAGGTCTCTTAAT 1140
Query 1153 TATTCTCTCATTGATGACTGGAGACCTTGGATGATAGGAGATCAAATCGCTGGATACACG 1212
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1141 TATTCTCTCATTGATGACTGGAGACCTTGGATGATAGGCGATCAAATCGCTGGATACACG 1200
Query 1213 AGGACCTATGCCAATAAGATGGCATTTGCTACTATCAAAGGAGGAGGACACACACCAGAG 1272
||||| ||||||||||||||| |||||||||| ||||||||||| |||||||||||||||
Sbjct 1201 AGGACTTATGCCAATAAGATGACATTTGCTACCATCAAAGGAGGTGGACACACACCAGAG 1260
Query 1273 TATAAACCAGAGGAGAGTTATATCATGTTCCAAAGGTGGATCAGTGGTCAGCCTTTGTAA 1332
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 TATAAACCAGAGGAGACTTATATCATGTTCCAAAGGTGGATCAGTGGTCAGCCTTTGTAA 1320
Query 1333 CTTGAAGCCAAA 1344
||||||||||||
Sbjct 1321 CTTGAAGCCAAA 1332
> Ahg476459 jgi|Araly1|476459|fgenesh2_kg.2__1589__AT1G73270.1
Length=1284
Score = 1092 bits (591), Expect = 0.0
Identities = 1062/1284 (83%), Gaps = 54/1284 (4%)
Strand=Plus/Plus
Query 70 TTCTTGAGTCAGC-GTA--CTGATTCTGCCTCTATCGTCAAG-TCTCTTCCTGGTTTTGA 125
||||||||| ||| || ||| ||||| || ||||||||| || ||||||||||||||
Sbjct 22 TTCTTGAGTAAGCAATATGTTGACTCTGCATCAATCGTCAAGTTC-CTTCCTGGTTTTGA 80
Query 126 TGGCCCTCTTCCCTTTGAACTCGAAACCGGGTATATTGGTGTTGGTGAGGAAGAGGAAGT 185
|| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 81 AGGTCCTCTTCCCTTTGAGCTCGAAACCGGGTATATTGGAGTTGGTGAGGAAGAGGAAGT 140
Query 186 GCAGTTGTTTTACTACTTTATCAAGTCTGAGAGGAATCC-ACAAGAAGATCCTCTTCTAC 244
||| ||||||||||||| ||||| ||||||||||| || | ||||||| |||||||| |
Sbjct 141 GCAACTGTTTTACTACTTCATCAAATCTGAGAGGAACCCGA-AAGAAGACCCTCTTCTTC 199
Query 245 TCTGGTTAAGTGGAGGACCTGGTTGCTCTTCTATCTCTGGTCTTCTTTACGAGAATGGGC 304
||||| ||| |||||||||||| |||||| | ||| |||| ||||||| ||||||||||
Sbjct 200 TCTGGCTAACTGGAGGACCTGGCTGCTCTGCCATCACTGGCCTTCTTTTTGAGAATGGGC 259
Query 305 CTGTGAATGTGAAGATTGAGGTTTACAATGGAACTCTTCCTTCCTTGGTCTCTACTACAT 364
|| || | ||||| | || ||||||||||||||||| ||||| ||||||||||||||||
Sbjct 260 CTCTGGCTATGAAGCTCGATGTTTACAATGGAACTCTCCCTTCTTTGGTCTCTACTACAT 319
Query 365 ATTCATGGACTAAGGTTTCGAGTATAATATAT-TTGGATCAGCCTGTTGGAACTGGCTTC 423
|||| ||||| ||| ||| || ||||||| | ||||||||||| |||||||||||||||
Sbjct 320 ATTCTTGGACAAAGACTTCAAGCATAATAT-TCTTGGATCAGCCCGTTGGAACTGGCTTC 378
Query 424 TCCTACTCAAGAACTAAACT-TGTTAACAAACCCAGTGATTCAGGAGAAGCCAAGA-GAA 481
|| || ||||||||| |||| | |||| ||||| |||||| ||||||||||||| | | |
Sbjct 379 TCATATTCAAGAACTCAACTAT-TTAATAAACCTAGTGATACAGGAGAAGCCAA-ACGGA 436
Query 482 TCCACGAGTTTCTTCACAAGTGGCTAGGCAAGCATCAAGAGTTTTCCTCCAACCCTTTCT 541
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 437 TCCATGAGTTTCTTCAAAAGTGGCTAGGCAAGCATCAAGAGTTTTCCTCCAACCCTTTCT 496
Query 542 ATGTCGGTGGGGATTCTTATTGTGGTATGGTCATTCCGGC-ACTCGTTCAAGAAATCTCA 600
|||| || || |||||||||| |||||| | ||||| | || ||||||||||||||||
Sbjct 497 ATGTTGGCGGAGATTCTTATTCCGGTATGATTGTTCCGACTAC-CGTTCAAGAAATCTCA 555
Query 601 AAAGGAAACTATGTATGCTGCAAACCTCCAATAAATCTTCAGGGCTATATTCTTGGAAAC 660
|||||||| |||| |||||||||||||||||||||||||||||| ||| | ||||| |||
Sbjct 556 AAAGGAAATTATGAATGCTGCAAACCTCCAATAAATCTTCAGGGATATGTGCTTGGTAAC 615
Query 661 CC-ATCAACAGAAAATGAAGTTGA-TATTAATTATCGCATTCCATATGCTCATGGAATGG 718
|| | |||||| || || |||| || |||| | | | |||||||||||||||||||||
Sbjct 616 CCGGT-AACAGACTATAAAATTGATTA-TAATAACCTCGTTCCATATGCTCATGGAATGG 673
Query 719 CACTGATCTCTGATGAACTCTATGAGTCAATGAAGAGAATCTGCAAAGGAAAATATGAA- 777
|||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| |
Sbjct 674 CACTGATCTCTGATGAACTCTATGAGTCGTTGAAGCGAATCTGCAAAGGAGAATATGGAC 733
Query 778 AATGTTGATCCACGTAACACAAAATGCTTGAAACTCGTTGGAGAATATCAGAAGTGCACT 837
|| |||||||||| ||||||| |||| |||||||| ||| ||||| | | ||||| ||
Sbjct 734 AA-GTTGATCCACATAACACAGAATGTTTGAAACTTATTGAAGAATTTAATAAGTGTAC- 791
Query 838 AAA-AGAATAAACAAAGCACTTATAATA-ACGCCAGA-GTGTGTAGA--C-ACATCTCCT 891
|| ||| || ||||| ||| |||| || || || | ||||| ||| | ||| |||
Sbjct 792 AAGTAGATTATACAAATCACATATATTATAC-CC-GTTGTGTGAAGAAACTACAAATCCA 849
Query 892 GATTGCTATATGTATCGGTATTTGTTAACTACCTACTGGGCCAATGATGAGAAT-GT--G 948
||||||||||| |||||||||| |||||||||||||||| ||||| || || || |
Sbjct 850 GATTGCTATATTTATCGGTATTCATTAACTACCTACTGGGTTAATGACGA-AACCGTACG 908
Query 949 CAAAGAGCTCTTCATGTCAATAAGGGGAGTATAGGGGAATGGGTACGTTGTTATTTTGAG 1008
||||| ||||||| ||||||||| ||||||| |||||||| ||| ||| | || |||
Sbjct 909 CAAAG--CTCTTCAAATCAATAAGGAGAGTATAAGGGAATGGACACGATGTAACTT-GAG 965
Query 1009 A-TACCTTACAATCATGACATTAAAAGCAGTGTACCGTACCACATGAATAACAGCATCGA 1067
| || |||| | | ||||||| ||| || ||||| ||||| ||| ||| |||||| |
Sbjct 966 TGTTCCATACACTAACGACATTACAAGTAGCGTACCTTACCATATGTATAGTAGCATCAA 1025
Query 1068 TGGATATGCAT-CTCTCATCTTCAGTGGTGATCACGACATGGAAGTACCTT-ACCTTGGA 1125
||| ||| | | ||||||| ||||| ||||||||||| | ||| |||||| | |||||
Sbjct 1026 TGGCTAT-CGTTCTCTCATTTTCAGCGGTGATCACGATTTCGAAATACCTTTAG-TTGGA 1083
Query 1126 ACTCAAGCTTGGATTAGGTCTCTTAATTATTCTC-TCATTGATGACTGGAGACCTTGGAT 1184
||||||| |||||| | ||||| || ||||| | || |||||||||||||||| |||||
Sbjct 1084 ACTCAAGTTTGGATAAAATCTCTCAACTATTC-CATCGTTGATGACTGGAGACCATGGAT 1142
Query 1185 GAT-AGGAGATCAAATCGCTGGATACACGAGGACCTATGCCAATAAGATGGCATTTGCTA 1243
||| | | ||||| ||||||||||||| || || || |||||||||||| |||||||||
Sbjct 1143 GATCAACA-ATCAAGTCGCTGGATACACAAGAACTTACGCCAATAAGATGACATTTGCTA 1201
Query 1244 CTATCAAAGGAGGAGGACACACACCAGAGTATAAACCAGAGGAGAG-TTATATCATGTTC 1302
|| ||||| || |||||| |||||||||| ||||| || | || || |||||||
Sbjct 1202 CT------GGAGGTGGGCACACATCAGAGTATAAGCCAGATGAAACCTT-TACCATGTTC 1254
Query 1303 CAAAGGTGGATCAGTGGTCAGCCT 1326
||||||||||||| ||| || |||
Sbjct 1255 CAAAGGTGGATCAATGGCCAACCT 1278
> Ahg481161 jgi|Araly1|481161|fgenesh2_kg.4__221__AT2G22970.3
Length=1574
Score = 902 bits (488), Expect = 0.0
Identities = 1025/1281 (80%), Gaps = 50/1281 (4%)
Strand=Plus/Plus
Query 71 TCTTGAGTCAGCGTACTGATTCTGCCTCTATCGTCAAGTCTCTTCCTGGTTTTGATGGCC 130
|||||| ||| | | |||||||| |||||||||||||| |||||| || ||||| ||||
Sbjct 63 TCTTGAATCATCATGTTGATTCTGGCTCTATCGTCAAGTTTCTTCCCGGCTTTGAAGGCC 122
Query 131 CTCTTCCCTTT-GAACTCGAAACCGGGTATATTGGTGTTGGTGAGGAAGAGGAAGT-GCA 188
||||| ||||| ||||||||||||||||| |||||| ||||||||||||||||| | |||
Sbjct 123 CTCTT-CCTTTCGAACTCGAAACCGGGTACATTGGTATTGGTGAGGAAGAGGAA-TCGCA 180
Query 189 GTTGTTTTACTACTTT-ATCAAGTCTGAGAGGAATCCACAAGAAGATCCTCTTCTACTCT 247
|||||||||||| ||| ||||| ||||||| |||||| ||||||| |||||||| ||||
Sbjct 181 GTTGTTTTACTA-TTTCATCAAATCTGAGAACAATCCAAAAGAAGACCCTCTTCTTCTCT 239
Query 248 GGTTAAGTGGAGGACCTGGTTGCTCTTCTATCTCTGGTCTTCTTTACGAGAATGGGCCTG 307
|||||| |||||||||||| || ||||||||| |||| ||| ||| ||||||||| |||
Sbjct 240 GGTTAAATGGAGGACCTGGATGTTCTTCTATCACTGGCCTTTTTTTCGAGAATGGACCTC 299
Query 308 TGAATGTGAAGATT-GAGGTTTACAATGGAACTCTTCCTTCCTTGGTCTCTACTACATAT 366
|| | ||||| || |||||||||||||||| | | ||||| ||||||||||||||||||
Sbjct 300 TGGCTTTGAAG-TTAGAGGTTTACAATGGAAGTGTCCCTTCTTTGGTCTCTACTACATAT 358
Query 367 TCATGGACTAAGGTTTCGAGTATAATATATTTGGATCAGCCTGTTGGAACTGGCTTCTCC 426
|| ||||| ||| | ||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 359 TCGTGGACAAAGATGGCGAACATAATATTTTTGGATCAGCCTGTTGGAACTGGCTTCTCC 418
Query 427 TACTCAAGAACTAAACTTGTTAACAAACCCAGTGATTCAGGAGAAGCCAAGAGAATCCAC 486
||||||||||| |||| || | || || ||||| || |||||| ||||| ||||
Sbjct 419 TACTCAAGAACCCCACTTATTGATAAGCCTAGTGACACAAGAGAAGTTAAGAGGATCCGT 478
Query 487 GAGTTTCTTCACAAGTGGCTAGGCAAGCATCAAGAGTTTTCCTCCAACCCTTTCTATG-T 545
||||||||||| ||||||||| |||| |||| | ||||||| ||||||||||| |||| |
Sbjct 479 GAGTTTCTTCAAAAGTGGCTAAGCAATCATCCACAGTTTTCTTCCAACCCTTTTTATGCT 538
Query 546 CGGTGGGGATTCTTATTGTGGTATGGTCATTCCGGCACTCGTTCAAGAAATCTCAAAAGG 605
| || |||||||||| |||||| | |||| || ||||||||||||||||| |||||
Sbjct 539 AGC-GGAGATTCTTATTCCGGTATGATTGTTCCAGCCCTCGTTCAAGAAATCTCTAAAGG 597
Query 606 AAACTATGTATGCTGCAAACCTCCAATAAATCTTCAGGGCTATATTCTTGGAAACCC-AT 664
||| ||| |||| ||||| ||||| |||||||| ||||| ||||| || || ||||| ||
Sbjct 598 AAATTATATATGTTGCAACCCTCCTATAAATCTACAGGGTTATATACTCGGGAACCCGAT 657
Query 665 CAACAGAAAAT-GAAGTTGATATTAATTATCGCATTCCATATGCTCATGGAATGGCACTG 723
|||| || | |||| || || |||||| |||||| | ||||||||||||||||
Sbjct 658 -AACA-AATTTTGAAGAAGACCGAAACTATCGCGTTCCATTTTCTCATGGAATGGCACTA 715
Query 724 ATCTCTGATGAACTCTATGAGTCAATGAAGAGAATCTGCAAAGGAAAATATGAAAATGTT 783
|| || |||||||| || |||||||| | |||| |||||| ||||| ||| |||||
Sbjct 716 ATTTCAGATGAACTATACGAGTCAATTAGGAGAGCCTGCAACGGAAATTATTTCAATGTG 775
Query 784 GATCCACGTAACACAAAATGCTTGAAACTCGTTGGAGAATATCAGAAGTGCACTAAAAGA 843
|||| ||||||||||||||| |||||||| |||| |||||| || ||||| || | | |
Sbjct 776 GATCAACGTAACACAAAATGTTTGAAACTTGTTGAAGAATACCATAAGTGTACCGACA-A 834
Query 844 A-TAAACAAAG-CACTTATAATAACGCCAGAGTGTGTAGACA-CATCTCCTGATTGCTAT 900
| |||| | | | | |||| || | ||||| || | | | | ||||||||||||||| |
Sbjct 835 ACTAAATAGATTC-CATATACTATCACCAGATTGCG-ACATAACATCTCCTGATTGCTTT 892
Query 901 ATGTATCGGTATT-TGTTAACT-ACCTACTGGGCCAATGATGAGAATGT--GCAAAGAGC 956
| || | |||| | | || | |||||||||||| || |||| || |||| | |
Sbjct 893 TTATACCCATATTATCTC--CTTAGCTACTGGGCCAACGACGAGAGCGTTCGCAATG--C 948
Query 957 TCTTCATGTCAATAAGGGGAGTATAGGGGAATGGGTACGTTGTTATTTTGAG-ATACCTT 1015
||||||||| |||||| |||||||||| |||||||| || ||| || ||| | ||| |
Sbjct 949 TCTTCATGTTAATAAGTGGAGTATAGGAGAATGGGTGCGATGTAATAG-GAGTAAACCAT 1007
Query 1016 ACAATCATG-ACATTAAAAGCAGTGTACCGTACCACATGAATAACAGCATCGATGGATAT 1074
|||| || | |||| || ||||| ||||| ||||| ||||||||||| || |||| ||
Sbjct 1008 ACAA-CAAGGACATCAAGAGCAGCGTACCATACCATATGAATAACAGTATTAATGGTTAC 1066
Query 1075 -GCATCTCTCATCTTCAGTGGTGATCACGACATGGAAGTACCTTACCTTGGAACTCAAGC 1133
| ||||||||||| |||||||||||| || ||| || |||| || | |||||||||
Sbjct 1067 CG-ATCTCTCATCTACAGTGGTGATCATGATTTGGTGGTTCCTTTCCAAGCAACTCAAGC 1125
Query 1134 TTGGATTAGGTCTCTTAATTATTCTC-TCATTGATGACTGGAGACCTTGGATGAT-AGGA 1191
||||| | ||||| ||||| || | ||||| |||| ||||||||||||||||| | |
Sbjct 1126 ATGGATAAAATCTCTAAATTACTC-CATCATTCATGAATGGAGACCTTGGATGATTAA-A 1183
Query 1192 GATCAAATCGCTGGATACACGAGGACCTATGCCAATAAGATGGCATTTGCTACTATCAAA 1251
|||||||||||||||||||| || || ||| ||||||||||| | ||||||||| |||||
Sbjct 1184 GATCAAATCGCTGGATACACAAGAACTTATTCCAATAAGATGACTTTTGCTACTGTCAAA 1243
Query 1252 GGAGGAGGACACACACCAGAGTATAAACCAGAGGAGAGTTATATCATGTTCCAAAGGTGG 1311
| || | | ||| |||||||| | ||||||| ||||||||| |||||||||
Sbjct 1244 G--------CA-ATAG-AGA--ATAAACCAAATGAGAGTTTTATCATGTTTCAAAGGTGG 1291
Query 1312 ATCAGTGGTCAGCCTTTGTAA 1332
|| | ||| || |||||||||
Sbjct 1292 ATTAATGGCCAACCTTTGTAA 1312
> Ahg478582 jgi|Araly1|478582|fgenesh2_kg.3__1283__AT3G12220.1
Length=1399
Score = 220 bits (119), Expect = 2e-56
Identities = 242/300 (81%), Gaps = 14/300 (5%)
Strand=Plus/Plus
Query 1017 CAATCATGACATTAAAAGCAGTGTACCGTACCACATGAATAACAGCATCGATGGATATGC 1076
|||| | |||||||||||||| |||| ||||| | || ||||||||||| || ||| |
Sbjct 1027 CAATAAAGACATTAAAAGCAGCATACCATACCATAAAAAGAACAGCATCGAAGGCTAT-C 1085
Query 1077 -ATCTCTCATCTTCAGTGGTGATCACGACATGG-AAGTACCTTACCTTGGAACTCAAG-C 1133
||||||||||||||||||||||||||||||| || ||||||| |||||||||||| |
Sbjct 1086 GATCTCTCATCTTCAGTGGTGATCACGACATGCTAAC-ACCTTACATTGGAACTCAAGAC 1144
Query 1134 TTGGATTAGGTCTCTTAATTATTCTC-TCATTGATGACTGGAGACCTTGGATGATAGGAG 1192
| |||| || |||||||| ||||| | | ||||| | ||||| || ||||||||| |
Sbjct 1145 T-GGATCAGATCTCTTAACTATTC-CATTATTGACAAATGGAGGCCATGGATGATACTTG 1202
Query 1193 ATCAAATCGCTGGATACACGAGGACCTATGCCAATAAGATGGCATTTGCTACTA-TCAAA 1251
||||| ||||||||||||| | ||| ||||| || | |||| ||||||| || | | |||
Sbjct 1203 ATCAAGTCGCTGGATACACTACGACTTATGCTAACAGGATGACATTTGCAAC-AGTGAAA 1261
Query 1252 GGAGGAGGACACACACCAGAGTATAAACC-AGAGGAGAGTT-ATATCATGTTCCAAAGGT 1309
|||||||| ||||| ||| |||||||| | |||||| || | ||| ||||||| ||||
Sbjct 1262 GGAGGAGGGCACACGTTAGACTATAAACCCA-AGGAGAATTCA-ATCTTGTTCCAGAGGT 1319
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56830645540
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5