BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G10660.1 Length=2142 Score E Sequences producing significant alignments: (Bits) Value Ahg478400 jgi|Araly1|478400|fgenesh2_kg.3__1101__AT3G10660.1 3136 0.0 Ahg905714 jgi|Araly1|905714|Al_scaffold_0003_2842 1989 0.0 Ahg939889 jgi|Araly1|939889|scaffold_600433.1 1740 0.0 Ahg345668 jgi|Araly1|345668|fgenesh1_pg.C_scaffold_4002010 636 0.0 > Ahg478400 jgi|Araly1|478400|fgenesh2_kg.3__1101__AT3G10660.1 Length=2089 Score = 3136 bits (1698), Expect = 0.0 Identities = 1869/1949 (96%), Gaps = 21/1949 (1%) Strand=Plus/Plus Query 1 ATGGGTAATGCTTGCGTTGGACCAAACATTTCTGGAAATGGTTTCTTGCAAACTGTTACG 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 ATGGGTAATGCTTGCGTTGGACCAAACATTTCTGGAAATGGTTTCTTACAAACTGTTACG 60 Query 61 GCTGCAATGTGGAGGCCACGGATCGGAGCTGAGCAAG---CTTCTTCTTCTTCCCATGGT 117 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||| | Sbjct 61 GCTGCAATGTGGCGGCCACGGATCGGAGTTGAGCAAGCTTCTTCTTCTTCTTCCCA---T 117 Query 118 AATGGACAAGTTTCTAAAGAAGCAGCTTCAGAACCAGCTA-CTGATCAAGTCCAGAATAA 176 |||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 118 AATGGACAAGTTGCTAAAGAAGCAGCTTCAGAACCAGC-ACCTGATCAAGTCCAGAATAA 176 Query 177 ACCCCCTGAGCCTATCACAATGCCAAGCT-CAAAGACCAATCCCGAAACTAAACTGAAAC 235 |||||||||||||||||||||||||| | ||| ||||||||||||||| |||| ||||| Sbjct 177 ACCCCCTGAGCCTATCACAATGCCAA-ATGCAAGGACCAATCCCGAAACCAAACCGAAAC 235 Query 236 CCGATCTAGAGATCCAACCTGAAGAAAAGAAGGAGAAAGTTCTTGCAGAAGAAACCAAGC 295 |||||||||||||||||||| | || ||||||||||| | ||||||| ||||| Sbjct 236 CCGATCTAGAGATCCAACCT--------G-AGCAGAAAGTTCTTCCTGAAGAAATCAAGC 286 Query 296 AGAAAGTTGTTCCTGAAGAAAGTAAGCAGGAAGTTCCTCCTGAAGAAAGTAAGCGGGAAG 355 ||||||| ||||||||||||||||||||||||||| ||||||||| || |||||||||| Sbjct 287 CGAAAGTTCTTCCTGAAGAAAGTAAGCAGGAAGTTCTTCCTGAAGAGAGCAAGCGGGAAG 346 Query 356 TTGTTGTGCAGCCGGAGTCAGCAAAACCAGAAACAAAGTCTGAATCCAAGCCAGAGACAA 415 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 347 TTGTTGTGCAGCCGGAGACAGCAAAACCAGAAACAAAGTCTGAATCCAAGCCAGAGACAA 406 Query 416 CAAAACCAGAAACAACGTCTGAAACCAAGCCAGAGACGAAAGCTGAACCTCAGAAGCCTA 475 |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 407 TAAAACCAGAAACAACGTCTGAAACCAAGCCGGAGACGAAACCTGAACCTCAGAAGCCTA 466 Query 476 AACATATGAGGAGAGTGTCCAGTGCAGGGCTTAGAACTGAGTCAGTGTTGCAGAGGAAAA 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 467 AACATATGAGGAGAGTGTCCAGTGCAGGGCTTAGAACTGAGTCAGTGTTGCAGAGGAAAA 526 Query 536 CTGAAAACTTTAAGGAGTTCTATTCATTAGGG-AGGAAACTTGGACAAGGGCAATTTGGG 594 ||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||| Sbjct 527 CTGAAAACTTTAAAGAGTTCTATTCATT-GGGAAGGAAACTTGGACAAGGCCAATTTGGG 585 Query 595 ACGACGTTTTTATGCCTTGAGAAAGGTACTGGGAACGAATATGCGTGCAAGTCGATTTCC 654 ||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct 586 ACGACGTTTTTATGCCTTGAGAAAGGTACGGGGAATGAGTATGCGTGCAAGTCGATTTCC 645 Query 655 AAGAGGAAGCTTTTGACTGATGAGGATGTTGAAGATGTGAGAAGAGAGATTCAGATAATG 714 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 646 AAGAGGAAGCTTTTGACTGATGAGGACGTTGAAGATGTGAGAAGGGAGATTCAGATAATG 705 Query 715 CATCACTTGGCTGGTCATCCGAATGTTATATCTATTAAAGGTGCTTATGAGGATGTTGTT 774 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct 706 CATCACTTGGCTGGTCATCCAAATGTTATATCTATAAAAGGCGCTTATGAGGATGTTGTT 765 Query 775 GCGGTACATCTTGTGATGGAGTTGTGTTCGGGTGGCGAGCTTTTTGATAGAATTATTCAA 834 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 766 GCGGTACACCTTGTGATGGAGTTGTGTTCGGGTGGCGAGCTTTTTGATAGAATTATTCAA 825 Query 835 CGTGGACATTACACTGAGAGGAAAGCTGCTGAGCTTGCGAGAACCATTGTTGGGGTTTTA 894 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 826 CGTGGACATTACACTGAGAGGAAAGCTGCTGAGCTTGCGAGAACCATTGTTGGGGTTTTA 885 Query 895 GAGGCTTGTCACTCTCTTGGTGTTATGCATCGGGACCTCAAGCCAGAGAATTTTCTATTT 954 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 886 GAGGCTTGTCACTCTCTTGGTGTTATGCATCGAGACCTCAAGCCCGAGAATTTTCTATTT 945 Query 955 GTTAGTAGAGAGGAAGATTCCCTGTTGAAAACGATCGACTTTGGACTCTCAATGTTCTTT 1014 ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 946 GTTAGTAAAGAGGAAGATTCCCTCTTGAAAACGATCGACTTTGGACTCTCAATGTTCTTT 1005 Query 1015 AAGCCAGATGAGGTTTTTACAGATGTTGTTGGTAGTCCGTATTATGTAGCTCCAGAAGTT 1074 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1006 AAGCCAGATGAGGTTTTTACAGATGTTGTTGGTAGTCCGTATTATGTAGCTCCAGAAGTT 1065 Query 1075 CTTAGAAAGCGTTATGGTCCTGAATCAGATGTGTGGAGTGCTGGTGTGATTGTTTACATT 1134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1066 CTTAGAAAGCGTTATGGTCCTGAATCAGATGTGTGGAGTGCTGGTGTGATTGTTTACATT 1125 Query 1135 TTGTTAAGCGGAGTTCCTCCTTTCTGGGCCGAAACCGAACAAGGTATTTTCGAGCAGGTC 1194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1126 TTGTTAAGCGGAGTTCCTCCTTTCTGGGCCGAAACCGAACAAGGTATTTTCGAGCAGGTC 1185 Query 1195 CTTCATGGAGATCTTGACTTTTCATCTGATCCATGGCCAAGCATCTCTGAAAGCGCGAAA 1254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1186 CTTCATGGAGATCTTGACTTTTCATCTGATCCATGGCCAAGCATCTCTGAAAGCGCAAAA 1245 Query 1255 GACTTGGTAAGGAAAATGCTTGTTCGAGACCCCAAGCGAAGACTAACCGCACATCAAGTA 1314 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1246 GACTTGGTGAGGAAAATGCTTGTTCGGGACCCCAAGCGAAGACTAACCGCACATCAAGTG 1305 Query 1315 TTATGTCATCCATGGGTACAGATTGACGGTGTGGCTCCAGATAAACCTCTGGACTCTGCT 1374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1306 TTATGTCATCCATGGGTACAGATTGACGGTGTGGCTCCAGATAAACCTCTGGACTCTGCT 1365 Query 1375 GTTCTGAGCCGTATGAAGCAATTTTCTGCAATGAACAAGTTCAAGAAAATGGCTCTTAGA 1434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1366 GTTCTGAGCCGTATGAAGCAATTTTCTGCAATGAACAAGTTCAAGAAAATGGCTCTTAGA 1425 Query 1435 GTCATAGCTGAGAGCTTATCTGAAGAAGAAATAGCCGGTTTAAAACAAATGTTCAAGATG 1494 |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 1426 GTCATAGCTGAGAGCTTATCCGAAGAAGAAATAGCCGGTTTAAAAGAAATGTTCAAGATG 1485 Query 1495 ATAGACGCAGACAATAGTGGTCAGATCACTTTTGAAGAACTGAAAGCAGGACTAAAACGA 1554 || ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1486 ATTGACGCAGACAACAGTGGTCAGATAACTTTTGAAGAACTGAAAGCAGGACTAAAACGA 1545 Query 1555 GTTGGTGCCAATCTCAAAGAGTCAGAGATTCTTGATCTAATGCAAGCTGCTGATGTGGAC 1614 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 1546 GTTGGTGCCAATCTCAAAGAGTCAGAAATTCTTGATCTAATGCAAGCTGCTGATGTAGAC 1605 Query 1615 AATAGCGGAACGATAGACTACAAAGAGTTCATAGCCGCCACATTGCATCTAAACAAAATA 1674 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 1606 AATAGCGGAACGATAGATTACAAAGAGTTCATAGCCGCCACATTGCATTTAAACAAAATA 1665 Query 1675 GAGAGAGAGGACCATTTGTTCGCCGCCTTCTCTTACTTTGACAAGGACGAGAGTGGCTTT 1734 ||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| Sbjct 1666 GAGAGAGAGGACCATTTGTTCGCGGCCTTCTCCTACTTTGACAAGGACGAGAGCGGCTTC 1725 Query 1735 ATCACCCCGGACGAGCTTCAACAAGCTTGCGAAGAGTTTGGTGTTGAAGATGCCCGCATA 1794 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1726 ATCACCCCAGATGAGCTTCAACAAGCTTGCGAGGAGTTTGGTGTTGAAGATGCCCGCATA 1785 Query 1795 GAAGAAATGATGCGCGATGTTGATCAAGACAAGGATGGACGAATAGACTACAACGAGTTT 1854 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1786 GAAGAAATGATGCGCGATGTTGATCAAGACAAGGATGGGCGAATAGACTACAACGAGTTT 1845 Query 1855 GTGGCAATGATGCAGAAAGGGAGCATAATGGGAGGACCTGTGAAGATGGGTTTAGAGAAC 1914 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1846 GTGGTAATGATGCAGAAAGGGAGCATAATGGGAGGACCTGTGAAAATGGGTTTAGAGAAC 1905 Query 1915 AGCATTAGCATTTCTCTGAAACATTAGTT 1943 ||||||||||||||||||||||||||||| Sbjct 1906 AGCATTAGCATTTCTCTGAAACATTAGTT 1934 Score = 224 bits (121), Expect = 2e-57 Identities = 133/138 (96%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 1992 ATGATGATCATGATTGTGTTTAT-CTCAACATTTTGATGAGA-TTTTTGTTCGTTAGACT 2049 ||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||||| Sbjct 1954 ATGATGATCATGATTGTGTTT-TCCTCAACATTTTGATGAGATTTTTTG-TCGTTAGACT 2011 Query 2050 GGTTTAGGTAAATCTGTTTCTGTACTATGTACTTTTATGCATATACACATAGCTTTTGTC 2109 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2012 GGTTTAGGTAAATCTGTTTCTGTACTATGTACTTTTATGCATATACACATAGTTTTTGTC 2071 Query 2110 TGTAACTTTTGGTCATAA 2127 |||||||||||||||||| Sbjct 2072 TGTAACTTTTGGTCATAA 2089 > Ahg905714 jgi|Araly1|905714|Al_scaffold_0003_2842 Length=1257 Score = 1989 bits (1077), Expect = 0.0 Identities = 1172/1218 (96%), Gaps = 6/1218 (0%) Strand=Plus/Plus Query 388 ACAAAGTCTGAATCCAAGCCAGAGACAACAAAACCAGAAACAACGTCTGAAACCAAGCCA 447 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACAAAGTCTGAATCCAAGCAAGAGACAACAAAACCAGAAACAACGTCTGAAACCAAGCCG 60 Query 448 GAGACGAAAGCTGAACCTCAGAAGCCTAAACATATGAGGAGAGTGTCCAGTGCAGGGCTT 507 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GAGACGAAACCTGAACCTCAGAAGCCTAAACATATGAGGAGAGTGTCCAGTGCAGGGCTT 120 Query 508 AGAACTGAGTCAGTGTTGCAGAGGAAAACTGAAAACTTTAAGGAGTTCTATTCATTAGGG 567 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 121 AGAACTGAGTCAGTGTTGCAGAGGAAAACTGAAAACTTTAAAGAGTTCTATTCATT-GGG 179 Query 568 -AGGAAACTTGGACAAGGGCAATTTGGGACGACGTTTTTATGCCTTGAGAAAGGTACTGG 626 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 180 AAGGAAACTTGGACAAGGCCAATTTGGGACGACGTTTTTATGCCTTGAGAAAGGTACGGG 239 Query 627 GAACGAATATGCGTGCAAGTCGATTTCCAAGAGGAAGCTTTTGACTGATGAGGATGTTGA 686 |||||| |||||||| | ||||||||||||||||||||||||||| |||||||| ||||| Sbjct 240 GAACGAGTATGCGTGTACGTCGATTTCCAAGAGGAAGCTTTTGACGGATGAGGACGTTGA 299 Query 687 AGATGTGAGAAGAGAGATTCAGATAATGCATCACTTGGCTGGTCATCCGAATGTTATATC 746 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 300 AGATGTGAGAAGGGAGATTCAGATAATGCATCACTTGGCTGGTCATCCAAATGTTATATC 359 Query 747 TATTAAAGGTGCTTATGAGGATGTTGTTGCGGTACATCTTGTGATGGAGTTGTGTTCGGG 806 ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 360 TATTAAAGGCGCTTATGAGGATGTTGCTGCGGTACACCTTGTGATGGAGTTGTGTTCGGG 419 Query 807 TGGCGAGCTTTTTGATAGAATTATTCAACGTGGACATTACACTGAGAGGAAAGCTGCTGA 866 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 TGGCGAGCTTTTTGATAGAATTATTCAACGTGGACATTACACTGAGAGGAAAGCTGCTGA 479 Query 867 GCTTGCGAGAACCATTGTTGGGGTTTTAGAGGCTTGTCACTCTCTTGGTGTTATGCATCG 926 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 GCTTGCGAGAACCATTGTTGGGGTTTTAGAGGCTTGTCACTCTCTTGGTGTTATGCATCG 539 Query 927 GGACCTCAAGCCAGAGAATTTTCTATTTGTTAGTAGAGAGGAAGATTCCCTGTTGAAAAC 986 ||||||||||| |||||||||||||| ||||||| ||||||||||||||| |||||||| Sbjct 540 AGACCTCAAGCCCGAGAATTTTCTATTCGTTAGTAAAGAGGAAGATTCCCTCTTGAAAAC 599 Query 987 GATCGACTTTGGACTCTCAATGTTCTTTAAGCCAGATGAGGTTTTTACAGATGTTGTTGG 1046 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 GATCGACTTTGGACTCTCAATGTTCTTTAAGCCAGATGAGGTTTTTACAGATGTTGTTGG 659 Query 1047 TAGTCCGTATTATGTAGCTCCAGAAGTTCTTAGAAAGCGTTATGGTCCTGAATCAGATGT 1106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 TAGTCCGTATTATGTAGCTCCAGAAGTTCTTAGAAAGCGTTATGGTCCTGAATCAGATGT 719 Query 1107 GTGGAGTGCTGGTGTGATTGTTTACATTTTGTTAAGCGGAGTTCCTCCTTTCTGGGCCGA 1166 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 720 GTGGAGTGCTGGTGTGATTGTTTACATTTTGTTAAGCGGAGTTCCTCCTTTTTGGGCCGA 779 Query 1167 AACCGAACAAGGTATTTTCGAGCAGGTCCTTCATGGAGATCTTGACTTTTCATCTGATCC 1226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 AACCGAACAAGGTATTTTCGAGCAGGTCCTTCATGGAGATCTTGACTTTTCATCTGATCC 839 Query 1227 ATGGCCAAGCATCTCTGAAAGCGCGAAAGACTTGGTAAGGAAAATGCTTGTTCGAGACCC 1286 ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||| Sbjct 840 ATGGCCAAGCATCTCTGAAAGTGCAAAAGACTTGGTGAGGAAAATGCTTGTTCGGGACCC 899 Query 1287 CAAGCGAAGACTAACCGCACATCAAGTATTATGTCATCCATGGGTACAGATTGACGGTGT 1346 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 900 CACGCGAAGACTAACCGCACATCAAGTATTATGTCATCCATGGGTACAGATTGACGGTGT 959 Query 1347 GGCTCCAGATAAACCTCTGGACTCTGCTGTTCTGAGCCGTATGAAGCAATTTTCTGCAAT 1406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 960 GGCTCCAGATAAACCTCTGGACTCTGCTGTTCTGAGCCGTATGAAGCAATTTTCTGCAAT 1019 Query 1407 GAACAAGTTCAAGAAAATGGCTCTTAGAGTCAT--AGCTGAGAGCTTATCTGAAGAAGAA 1464 |||||||||||||||||||||||||||| | | | || | |||||| ||||||||| Sbjct 1020 GAACAAGTTCAAGAAAATGGCTCTTAGATTTTTTCAACTT-GT-CTTATCCGAAGAAGAA 1077 Query 1465 ATAGCCGGTTTAAAACAAATGTTCAAGATGATAGACGCAGACAATAGTGGTCAGATCACT 1524 ||||||||||||||| |||||||||||||||| ||| ||||||| ||||||||||| ||| Sbjct 1078 ATAGCCGGTTTAAAAGAAATGTTCAAGATGATTGACACAGACAACAGTGGTCAGATAACT 1137 Query 1525 TTTGAAGAACTGAAAGCAGGACTAAAACGAGTTGGTGCCAATCTCAAAGAGTCAGAGATT 1584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1138 TTTGAAGAACTGAAAGCAGGACTAAAACGAGTTGGTGCCAATCTCAAAGAGTCAGAAATT 1197 Query 1585 CTTGATCTAATGCAAGCT 1602 |||||||||||||||||| Sbjct 1198 CTTGATCTAATGCAAGCT 1215 > Ahg939889 jgi|Araly1|939889|scaffold_600433.1 Length=1874 Score = 1740 bits (942), Expect = 0.0 Identities = 1316/1498 (88%), Gaps = 20/1498 (1%) Strand=Plus/Plus Query 456 AGCTGAACCTCAGAAGCCTAAACATATGAGGAGAGTGTCCAGTGCAGGGCTTAGAACTGA 515 |||| ||||| ||||||||||||| |||| ||||||||| |||||||||||||| ||||| Sbjct 368 AGCTAAACCTAAGAAGCCTAAACACATGAAGAGAGTGTCAAGTGCAGGGCTTAGGACTGA 427 Query 516 GTCAGTGTTGCAGAGGAAAACTGAAAACTTTAAGGAGTTCTATTCATTAGGG-AGGAAAC 574 |||||| ||||||||||| ||||||||||| ||||| |||||||| || ||| ||||||| Sbjct 428 GTCAGTATTGCAGAGGAAGACTGAAAACTTCAAGGAATTCTATTCCTT-GGGAAGGAAAC 486 Query 575 TTGGACAAGGGCAATTTGGGACGACGTTTT-TATGCCTTGAGAAAG-GTACTGGGAACGA 632 | ||||||||||||||||||||||| |||| |||| | ||| ||| ||| ||||| || Sbjct 487 TCGGACAAGGGCAATTTGGGACGAC-TTTTCTATGTGTGGAG-AAGACTACAGGGAAGGA 544 Query 633 ATATGCGTGCAAGTCGATTTCCAAGAGGAAGCTTTTGACTGATGAGGATGTTGAAGATGT 692 | ||| |||||||||||| | ||||||||||| |||||||||||||| ||||| ||||| Sbjct 545 GTTTGCATGCAAGTCGATTGCTAAGAGGAAGCTGTTGACTGATGAGGACGTTGAGGATGT 604 Query 693 GAGAAGAGAGATTCAGATAATGCATCACTTGGCTGGTCATCCGAATGTTATATCTATTAA 752 |||||| || ||||||||||||||||||||||||||||| || ||||| ||||| ||||| Sbjct 605 GAGAAGGGAAATTCAGATAATGCATCACTTGGCTGGTCACCCCAATGTCATATCCATTAA 664 Query 753 AGGTGCTTATGAGGATGTTGTTGCGGTACATCTTGTGATGGAGTTG-TGTTCGGGTGGCG 811 ||| ||||||||||||||||| ||||| || ||||| |||||| || ||| | ||||||| Sbjct 665 AGGAGCTTATGAGGATGTTGTGGCGGTGCACCTTGTAATGGAG-TGTTGTGCAGGTGGCG 723 Query 812 AGCTTTTTGATAGAATTATTCAACGTGGACATTACACTGAGAGGAAAGCTGCTGAGCTTG 871 |||||||||| || || |||||||| || || ||||| ||||||||||| |||||||| Sbjct 724 AGCTTTTTGACAGGATCATTCAACGCGGTCACTACACAGAGAGGAAAGCGGCTGAGCTCA 783 Query 872 CGAGAACCATTGTTGGGGTTTTAGAGGCTTGTCACTCTCTTGGTGTTATGCATCGGGACC 931 | ||||| || |||||||| |||||||||| || |||||||||||||||||||| |||| Sbjct 784 CTAGAACAATAGTTGGGGTAGTAGAGGCTTGCCATTCTCTTGGTGTTATGCATCGAGACC 843 Query 932 TCAAGCCAGAGAATTTTCTATTTGTTAGTAGAGAGGAAGATTCCCTGTTGAAAACGATCG 991 ||||||| ||||||||||| |||||||||| | | ||||||||||| ||||| ||||| | Sbjct 844 TCAAGCCCGAGAATTTTCTGTTTGTTAGTAAACACGAAGATTCCCTCTTGAAGACGATTG 903 Query 992 ACTTTGGACTCTCAATGTTCTTTAAGCCAGATGAGGTTTTTACAGATGTTGTTGGTAGTC 1051 | ||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| | Sbjct 904 ATTTTGGACTCTCCATGTTCTTTAAGCCAGACGATGTTTTTACAGATGTTGTTGGTAGCC 963 Query 1052 CGTATTATGTAGCTCCAGAAGTTCTTAGAAAGCGTTATGGTCCTGAATCAGATGTGTGGA 1111 | |||||||| ||||||||||||||| ||||||||||||| |||||| | ||||| |||| Sbjct 964 CATATTATGTTGCTCCAGAAGTTCTTCGAAAGCGTTATGGCCCTGAAGCTGATGTCTGGA 1023 Query 1112 GTGCTGGTGTGATTGTTTACATTTTGTTAAGCGGAGTTCCTCCTTTCTGGGCCGAAACCG 1171 ||||||| |||||||| |||||||| ||||||||||||||||| |||||||| ||||||| Sbjct 1024 GTGCTGGAGTGATTGTGTACATTTTATTAAGCGGAGTTCCTCCATTCTGGGCTGAAACCG 1083 Query 1172 AACAAGGTATTTTCGAGCAGGTCCTTCATGGAGATCTTGACTTTTCATCTGATCCATGGC 1231 |||||||||||||||| |||||||| || || |||||||||||||| || |||||||||| Sbjct 1084 AACAAGGTATTTTCGAACAGGTCCTCCACGGTGATCTTGACTTTTCGTCCGATCCATGGC 1143 Query 1232 CAAGCATCTCTGAAAGCGCGAAA-GACTTGGTAAGGAAAATGCTTGTTC-GAGACCCCAA 1289 ||||||| |||||||| || ||| || || || ||||||||||||| || | || ||||| Sbjct 1144 CAAGCATATCTGAAAGTGC-AAAGGATTTAGTGAGGAAAATGCTTG-TCAGGGATCCCAA 1201 Query 1290 GCGAAGACTAACCGCACATCAAGTATTATGTCATCCATGGGTAC-AGATTGACGGTGTGG 1348 | ||| |||| || || ||||||||||||||||| ||||| | || | ||||| |||| Sbjct 1202 GAAAAGGTTAACTGCCCACCAAGTATTATGTCATCCGTGGGTTCAAG-TCGACGGCGTGG 1260 Query 1349 CTCCAGATAAACCTCTGGACTCTGCTGTTCTGAGCCGTATGAAGCAATTTTCTGCAATGA 1408 ||||||| || ||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1261 CTCCAGACAAGCCTTTGGATTCTGCTGTTCTGAGCCGTATGAAGCAATTTTCTGCAATGA 1320 Query 1409 ACAAGTTCAAGAAAATGGCTCTTAGAGTCATAGCTGAGAGCTTATCTGAAGAAGAAATAG 1468 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1321 ACAAGTTCAAGAAAATGGCTCTTAGAGTCATTGCTGAGAGCTTATCTGAAGAAGAAATAG 1380 Query 1469 CCGGTTTAAAACAAATGTTCAAGATGATAGACGCAGACAATAGTGGTCAGATCACTTTTG 1528 |||| | ||| ||||||| || |||||||| || ||||| ||||||||||| ||||| | Sbjct 1381 CCGGCCTGAAAGAAATGTTTAATATGATAGATGCGGACAAGAGTGGTCAGATAACTTTCG 1440 Query 1529 AAGAACTGAAAGCAGGACTAAAACGAGTTGGTGCCAATCTCAAAGAGTCAGAGATTCTTG 1588 ||||||||||||||||||| |||||||| || || |||||||||||||| || ||||| | Sbjct 1441 AAGAACTGAAAGCAGGACTGAAACGAGTAGGGGCGAATCTCAAAGAGTCCGAAATTCTCG 1500 Query 1589 ATCTA-ATGCAAGCTGCTGATGTGGACAATAGCGGAACGATAGACTACAAAGAGTTCATA 1647 | || ||||||||||||||||||||||| |||||||| |||||||| |||||||||||| Sbjct 1501 A-CTTGATGCAAGCTGCTGATGTGGACAACAGCGGAACAATAGACTATAAAGAGTTCATA 1559 Query 1648 GCCGCCACATTGCATCTAAACAAAATAGAGAGAGAGGACCATTTGTTCGCCGCCTTCT-C 1706 || || ||||||||||||||||||||||||||||||||||||||||| || ||||| | | Sbjct 1560 GCTGCAACATTGCATCTAAACAAAATAGAGAGAGAGGACCATTTGTTTGCAGCCTT-TAC 1618 Query 1707 TTACTTTGACAAGGACGAGAGTGGCTTTATCACCCCGGACGAGCTTCAACAAGCTTGCGA 1766 ||||||||||| || | ||| |||| |||||||||||||||||||||||||||||| || Sbjct 1619 ATACTTTGACAAAGATGGGAGCGGCTATATCACCCCGGACGAGCTTCAACAAGCTTGTGA 1678 Query 1767 AGAGTTTGGTGTTGAAGATGCCCGCATAGAAGAAATGATGCGCGATGTTGATCAAGACAA 1826 |||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| Sbjct 1679 GGAGTTTGGTGTTGAGGATGTCCGCATAGAAGAACTGATGCGCGATGTTGATCAAGACAA 1738 Query 1827 GGATGGACGAATAGACTACAACGAGTTTGTGGCAATGATGCAGAAAGGGAGCATAATGGG 1886 || || ||||||||||||||||| ||||||||||||||||||||||| ||||| | || Sbjct 1739 CGACGGGCGAATAGACTACAACGAATTTGTGGCAATGATGCAGAAAGGAAGCATCACAGG 1798 Query 1887 AGGACCTGTGAAGATGGGTTTAGAGAACAGCATTAGCATTTCTCTGAAACAT-TAGTT 1943 |||||||||||| |||||| ||||||| ||| |||||||| |||| |||| | ||||| Sbjct 1799 AGGACCTGTGAAAATGGGTCTAGAGAAAAGCTTTAGCATTGCTCTTAAAC-TCTAGTT 1855 > Ahg345668 jgi|Araly1|345668|fgenesh1_pg.C_scaffold_4002010 Length=1761 Score = 636 bits (344), Expect = 0.0 Identities = 1022/1342 (76%), Gaps = 76/1342 (6%) Strand=Plus/Plus Query 565 GGGAGGAAACTT-GGACAAGGGCAATTTGGGACGACGTTT-TTATGCCTTGAGAA-AGGT 621 |||| |||| || || ||||| |||||||| || |||||| || ||| | || || | | Sbjct 418 GGGA-GAAAATTAGGTCAAGGACAATTTGGAACAACGTTTCTT-TGCGTGGATAAGAAG- 474 Query 622 ACTGGGAACGAATAT-GCGTGCAAGTCGATTTCCAAGAGGAAGCTTTTGACTGATGAGGA 680 || || || |||| | || ||||| |||| | |||||||| || || |||||| Sbjct 475 ACAGGTAAAGAAT-TCGCTTGCAAAACGATAGCTAAGAGGAAACTAACAACACCTGAGGA 533 Query 681 TGTTGAAGATGTGAGAAGAGAGATTCAGATAATGCATCACTTGGCTGGTCATCCGAATGT 740 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || || Sbjct 534 TGTTGAAGATGTGAGAAGAGAGATTCAGATAATGCATCATTTGTCTGGTCATCCAAACGT 593 Query 741 TATATCT-ATTAAA-GGTGCTTATGAGGATGTTGTTGCGGTACATCTTGTGATGGAG-TT 797 || || || | ||||| ||||| |||| || || || ||| ||||||||||| || Sbjct 594 GAT-TCAGAT-AGTTGGTGCGTATGAAGATGCAGTAGCTGTTCATGTTGTGATGGAGATT 651 Query 798 GTGTTCGGGTGGCGAGCTT-TTTGATAGAATTATTCA-ACGTGGACATTACACTGAGAGG 855 ||| | ||||| ||| || |||||||| ||||| || | | |||||||| ||||||| Sbjct 652 -TGTGCAGGTGGAGAG-TTATTTGATAGGATTATACAGA-GAGGACATTATACTGAGAAA 708 Query 856 AAAGCTGCTGAGCTTGCGAGAACCATTGTTGGGGTTTTAGAGGCTTGTCACTCTCTT-GG 914 ||||||||||||||||| || | ||||||||| ||| |||| |||||||| ||| || || Sbjct 709 AAAGCTGCTGAGCTTGCTAGGATCATTGTTGGTGTTATAGAAGCTTGTCATTCT-TTAGG 767 Query 915 TGTTATGCATCGGGACCTCAAGCCAGAGAATTTTCTA-TTTGTTAGTAGAGAGGAAGATT 973 ||| ||||| || || || ||||| |||||||| || ||||||||| |||| ||||| Sbjct 768 TGTGATGCACCGTGATCTTAAGCCTGAGAATTT-CTTGTTTGTTAGTGGAGATGAAGAAG 826 Query 974 CC-CTGTTGAAAACGATCGACTTTGGACTCTCAATGTTCTTTAAGCCAG-ATGAGGTTTT 1031 | || | || || || || ||||| ||||| | |||||||| |||| | || || Sbjct 827 CTGCTCTC-AAGACTATTGATTTTGGTCTCTCTGTCTTCTTTAAACCAGGA-GAAACATT 884 Query 1032 TACAGATGTTGTTGGTAGTCCGTATTATGTAGCTCCAGAAGTTCTTA-G-AAAGCGTTAT 1089 || ||||| ||||| ||||| |||||||| || ||||||||| ||| | ||| | |||| Sbjct 885 CACTGATGTAGTTGGGAGTCCTTATTATGTGGCACCAGAAGTT-TTAAGGAAA-CATTAT 942 Query 1090 GGTCCTGAATCAGATGTGTGGAGTGCTGGTGTGATTGTTTACATTTTGTTAAGCGGAGTT 1149 ||| ||||| ||||| ||||||||||| || ||| | |||||||| |||| || ||| Sbjct 943 AGTCATGAATGTGATGTTTGGAGTGCTGGAGTTATTATATACATTTTACTAAGTGGTGTT 1002 Query 1150 CCTCC-TTTCTGGGCCGAAACCGAACAAGGTAT-TTTCGAGCAGGTCCTTCAT-GGAGAT 1206 ||||| ||| |||| ||||| ||||| || || ||| |||||||| || | || || Sbjct 1003 CCTCCGTTT-TGGGATGAAACGGAACAGGGGATCTTT-GAGCAGGTT-TTGAAAGGTGAC 1059 Query 1207 CTTGACTTT-TCATCTGATCCATGGCCAAGCATCTCTGAAAGCGCGAAAGACTTGGTAAG 1265 ||||| ||| | ||| || |||||||| || | || ||||| || ||||| ||||| | Sbjct 1060 CTTGATTTTAT-ATCAGAACCATGGCCTAGTGTATCAGAAAGTGCTAAAGATTTGGTCCG 1118 Query 1266 GAAAATGCTTGTTC-GAGACCCCAAGCGAAG--ACTAACCGCACATCAAGTAT-TATGTC 1321 ||||| | | ||||||| ||| ||| | | || || ||| |||| | | |||| Sbjct 1119 TCGGATGCTAAT-CAGAGACCCTAAG--AAGCGAATGACTGCTCATGAAGT-TCTCTGTC 1174 Query 1322 ATCCATGGGTACAGATT-GACGGTGTGGCTCCAGATAAACCTCTGGACTCTGCTGTTCTG 1380 |||| |||| |||| | || ||||| |||| ||||||||||| || |||||||| || Sbjct 1175 ATCCTTGGGC-CAGAGTAGATGGTGTTGCTCTTGATAAACCTCTTGATTCTGCTGTCCTT 1233 Query 1381 AGCCGTATG-AAGCAATTTTCTGCAATGAACAAGTTCAAGAAAATGGCTCTTAGAG-TCA 1438 || ||| || || || ||||| || ||||||||| |||||||||| ||| | | || | | Sbjct 1234 AGTCGTTTGCAA-CAGTTTTCAGCCATGAACAAGCTCAAGAAAATTGCTATCA-AGGTAA 1291 Query 1439 TAGCTGAGAGCTTATCTGAAGAAGAAATAGCCGGTTTAAAACAAATGTTCAAGATGATAG 1498 |||| |||||||| || || ||||| ||||| || || || |||||||||||||||||| Sbjct 1292 TAGCAGAGAGCTTGTCAGAGGAAGAGATAGCAGGATTGAAGGAAATGTTCAAGATGATAG 1351 Query 1499 ACGCAGACAATAGTGGTCAGATCACTTTTGAAGAACTGAAAGCA-GGACTAAA-ACGAGT 1556 | ||||||||||||| || |||||| | |||||||| || | | || || | | |||| Sbjct 1352 ATACAGACAATAGTGGACACATCACTCTAGAAGAACTCAA-GAAAGGTTTAGACA-GAGT 1409 Query 1557 TGGTGCCAATCTCAAAGAGTCAGAGATTCTT-G-ATCTAATGCAAGCTGCTGATGTGGAC 1614 |||||| | || ||||| ||||| || || | || ||||||| || || ||| | || Sbjct 1410 TGGTGCTGACCTTAAAGATTCAGAAATA-TTAGGAT-TAATGCAGGCAGCGGATATAGAT 1467 Query 1615 AATAGCGGAACGATAGACTACAAAGAGTTCATAGCCGCCACATTGCATCTAAACAAAATA 1674 || || || || |||||||| |||||| ||||| || | ||||| | ||||||||| Sbjct 1468 AACAGTGGGACTATAGACTATGGAGAGTTTATAGCAGCGATGGTGCATTTGAACAAAATA 1527 Query 1675 GAGAGAGAGGACCATTTGTTCGCCGCCTTCTCTTACTTTGAC-AAGGACGAGA-GTGGCT 1732 |||| ||| |||||||||||| | || |||||||| |||||| ||| | | || |||| | Sbjct 1528 GAGAAAGAAGACCATTTGTTCACAGCATTCTCTTATTTTGACCAAG-ATG-GAAGTGG-T 1584 Query 1733 T-TATCACCCCG-GACGAGCTTCAACAAGCTTGCGAAG-AGTTTGGTGTT-GAAGATGCC 1788 | ||| ||| | |||||||| |||||||||||| ||| | ||||| || | |||| Sbjct 1585 TATATAACCA-GAGACGAGCTCCAACAAGCTTGC-AAGCAATTTGGC-TTAGCGGATGTT 1641 Query 1789 CGCATAGAAGAAATGATGCGCGATGTTGATCAAG-ACAAGGATGGACGAATAGACTACAA 1847 | | || || || | ||||| || ||| ||| |||| |||||| ||||||| |||| Sbjct 1642 CATTTGGACGACATTTTACGCGAAGTCGAT-AAGGACAACGATGGAAGAATAGATTACAG 1700 Query 1848 CGAGTTTGTGGCA-ATGATGCA 1868 |||||| |||| | |||||||| Sbjct 1701 CGAGTTCGTGG-ATATGATGCA 1721 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80598958420 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5