BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G11910.1 Length=3841 Score E Sequences producing significant alignments: (Bits) Value Ahg317971 jgi|Araly1|317971|fgenesh1_pm.C_scaffold_3000987 5657 0.0 Ahg487470 jgi|Araly1|487470|fgenesh2_kg.6__604__AT5G06600.1 3657 0.0 > Ahg317971 jgi|Araly1|317971|fgenesh1_pm.C_scaffold_3000987 Length=3348 Score = 5657 bits (3063), Expect = 0.0 Identities = 3255/3350 (97%), Gaps = 4/3350 (0%) Strand=Plus/Plus Query 124 ATGACTATGATGACTCCGCCGCCGCTAGATCAGCAGGAAGACGAGGAGATGCTTGTTCCG 183 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1 ATGACTATGATGACTCCGCCGCCGCTTGATCAGCAGGAAGACGAGGAGATGCTTGTTCCG 60 Query 184 AATCCGGATTTGGTCGAGGGACCTCAGCCTATGGAAGTTGCCCAAACTGATCCTGCTGCT 243 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 61 AATCCGGATTTGGTCGAGGGACCTCAGCCTATGGAAGTTGCCCAAACTGAGCCTGCTGCT 120 Query 244 ACCGCTGTGGAGAATCCACCACCCGAGGATCCTCCAAGTCTGAAATTCACGTGGACCATC 303 ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 121 ACCGCCGTGGAGAATCCGCCACCCGAGGATCCTCCAACTCTGAAATTCACGTGGACCATC 180 Query 304 CCAATGTTCACTAGGCTCAATACCAGGAAGCATTACTCTGACGTATTTGTTGTAGGCGGT 363 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 181 CCAATTTTCACTAGGCTCAATACCAGGAAGCATTACTCTGATGTATTTGTTGTTGGCGGT 240 Query 364 TATAAGTGGCGTATATTGATTTTTCCCAAAGGAAACAATGTCGACCATTTGTCAATGTAC 423 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TATAAATGGCGTATATTGATTTTTCCCAAAGGAAACAATGTCGACCATTTGTCAATGTAC 300 Query 424 TTGGATGTTGCTGATGCTGCGAATTTGCCGTACGGGTGGAGCAGATATTCACAGTTCAGT 483 |||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 301 TTGGATGTTGCTGACGCCGCGAATTTGCCGTATGGGTGGAGCAGATATTCACAGTTCAGT 360 Query 484 CTGGCTGTAGTGAATCAAGTCAACAACCGATATTCCATCAGAAAGGAGACGCAACATCAA 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CTGGCTGTAGTGAATCAAGTCAACAACCGATATTCCATCAGAAAGGAGACGCAACATCAA 420 Query 544 TTCAATGCAAGAGAAAGCGACTGGGGGTTTACATCATTCATGCCTCTCAGCGAGCTCTAT 603 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 421 TTCAATGCAAGAGAAAGCGATTGGGGGTTTACATCATTCATGCCTCTCAGCGAGCTCTAT 480 Query 604 GAACCCACTCGAGGATATTTAGTGAATGACACTGTTCTGATTGAAGCTGAAGTTGCTGTG 663 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 481 GATCCCACTCGAGGATATTTAGTGAATGACATTGTTCTGATTGAAGCTGAAGTTGCTGTG 540 Query 664 CGTAAAGTTCTTGATTATTGGTCATATGACTCaaaaaaaGAGACAGGTTTTGTTGGACTA 723 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 541 CGTAAAGTTCTTGATTACTGGTCATATGACTCAAAAAAAGAGACTGGTTTTGTTGGACTA 600 Query 724 AAAAACCAAGGTGCTACCTGTTACATGAATTCTCTCCTGCAGACTTTATACCACATACCT 783 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AAAAACCAAGGTGCTACCTGTTACATGAATTCTCTCCTGCAGACTTTATACCACATACCT 660 Query 784 TACTTTAGAAAGGCTGTTTACCACATGCCAACGACTGAAAATGATGCACCTACCGCTAGT 843 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 661 TACTTCAGAAAGGCTGTGTACCACATGCCAACGACTGAAAATGATGCACCTACTGCTAGT 720 Query 844 ATCCCATTGGCGCTCCAGAGTTTATTTTACAAGCTTCAGTATAATGATACCAGTGTAGCG 903 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 721 ATCCCATTGGCGCTCCAGAGTTTGTTTTACAAGCTTCAGTATAATGATACCAGTGTAGCG 780 Query 904 ACAAAGGAGCTGACAAAGTCGTTTGGTTGGGATACATATGATTCTTTTATGCAACATGAT 963 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 781 ACAAAGGAGCTGACAAAGTCGTTTGGTTGGGATACATATGATTCTTTCATGCAACATGAT 840 Query 964 GTACAAGAACTCAACAGAGTTCTCTGTGAAAAGCTTGAGGACAAGATGAAGGGAACTGTT 1023 || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 GTCCAAGAACTCAACCGAGTTCTCTGTGAAAAGCTTGAGGACAAGATGAAGGGAACTGTT 900 Query 1024 GTGGAGGGAACAATACAAAAGCTATTTGAAGGTCACCACATGAATTACATTGAGTGCATT 1083 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 901 GTGGAGGGAACAATACAAAAGCTATTTGAGGGTCACCACATGAATTACATTGAGTGCATT 960 Query 1084 AATGTAGATTACAAATCTACACGGAAAGAGTCATTTTATGACCTCCAGCTTGATGTTAAA 1143 ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| ||| Sbjct 961 AATGTAGATTACAAATCTACACGAAAAGAATCATTCTATGACCTCCAGCTTGATGTCAAA 1020 Query 1144 GGCTGCAAAGATGTATATGCTTCTTTTGACAAGTATGTTGAAGTTGAACGCCTTGAAGGA 1203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 GGCTGCAAAGATGTATATGCTTCTTTTGACAAGTATGTTGAAGTTGAACGCCTTGAAGGA 1080 Query 1204 GACAACAAATACCATGCAGAAGGACATGATTTGCAGGATGCaaaaaaaGGTGTTCTATTC 1263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 GACAACAAATACCATGCAGAAGGACATGATTTGCAGGATGCAAAAAAAGGTGTTCTATTC 1140 Query 1264 ATAGACTTTCCACCAGTTCTTCAACTTCAGCTCAAGAGGTTTGAATACGATTTTATGAGG 1323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 ATAGACTTTCCACCAGTTCTTCAACTTCAGCTCAAGAGGTTTGAATACGATTTTATGAGG 1200 Query 1324 GACACAATGGTGAAGATTAATGATCGGTATGAGTTTCCTCTCCAACTGGATCTCGACAGA 1383 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 1201 GACACAATGGTGAAGATCAATGATCGGTATGAGTTTCCTCTTCAACTGGATCTCGACAGA 1260 Query 1384 GAAGA-TGGAAGATATTTATCCCCTGATGCAGACAAGAGTGTCCGCAATCTCTACACCCT 1442 || || ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1261 GA-GAATGGAAAATATTTATCCCCTGATGCAGACAAGAGTGTTCGCAATCTCTACACCCT 1319 Query 1443 CCACAGTGTCTTGGTTCACAGTGGAGGAGTGCATGGAGGGCATTATTATGCTTTTATTAG 1502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320 CCACAGTGTCTTGGTTCACAGTGGAGGAGTGCATGGAGGGCATTATTATGCTTTTATTAG 1379 Query 1503 GCCAACACTTTCAGATCAGTGGTATAAATTTGACGATGAACGGGTCACGAAAGAAGATGT 1562 ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| Sbjct 1380 GCCAACACTTTCAGATCAGTGGTATAAATTTGATGATGAACGGGTAACGAAGGAAGATGT 1439 Query 1563 CAAAAGAGCACTGGAAGAGCAATATGGTGGTGAAGAAGAGTTACCGCAGAATAATCCTGG 1622 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1440 GAAAAGGGCACTGGAAGAGCAATATGGTGGTGAAGAAGAGTTACCGCAGAATAATCCTGG 1499 Query 1623 TTTCAATAATCCACCTTTCAAATTCACAAAATACTCGAATGCATACATGCTTGTTTATAT 1682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1500 TTTCAATAATCCACCTTTCAAATTCACAAAATACTCGAATGCATACATGCTTGTTTATAT 1559 Query 1683 TCGGGAAAGTGACAAGGATAAGATAATCTGCAACGTTGATGAGAAAGACATTGCGGAACA 1742 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1560 TCGGGAAAGTGACAAGGACAAGATAATCTGCAACGTTGATGAGAAAGACATTGCGGAACA 1619 Query 1743 TTTGCGGGTGAGGCTgaaaaaagaacaagaagaaaaggaagataaaagaaaaTACAAGGC 1802 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1620 TTTGCGGGTGAGGCTGAAAAAAGAACAAGAAGAAAAGGAAGATAAAAGAAAATACAAGGC 1679 Query 1803 TCAAGCTCACCTTTTCACGACAATCAAGGTCGCAAGAGATGATGACATCACTGAGCAAAT 1862 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1680 TCAAGCTCACCTTTTCACGACAATCAAGGTCGCAAGGGATGATGACATCACTGAGCAAAT 1739 Query 1863 TGGAAAGAATATATATTTTGATCTTGTTGATCATGAAAAAGTGAGGAGTTTTCGAATCCA 1922 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1740 TGGAAAGAATATATATTTTGATCTTGTTGATCATGAAAAAGTTCGGAGTTTTCGAATCCA 1799 Query 1923 GAAACAGACCCCCTTTCAACAATTTAAGGAAGAGGTAGCCAAAGAGTTTGGTGTCCCGGT 1982 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1800 GAAACAGACCCCCTTTCAACAATTTAAGGAAGAGGTAGCCAAAGAGTTTGGTGTCCCGGT 1859 Query 1983 TCAACTACAGCGGTTCTGGATCTGGGCAAAGCGTCAAAACCATACTTACCGCCCCAATCG 2042 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1860 TCAACTACAGCGGTTCTGGATCTGGGCAAAGCGTCAAAACCATACTTATCGCCCCAATCG 1919 Query 2043 TCCCCTATCACCTAATGAAGAATTACAGACGGTTGGACAAATACGAGAGGCATCTAACAA 2102 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1920 TCCCCTATTACCTAATGAAGAATTACAGACGGTTGGACAAATAAGAGAGGCATCTAACAA 1979 Query 2103 GGCAAACAATGCTGAGCTAAAGCTGTTTTTGGAAATAGAGCGTGGACCGGATGACCTTCC 2162 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1980 GGCAAACAATGCTGAACTAAAGCTGTTTTTGGAAATAGAGCGTGGACCGGATGATCTTCC 2039 Query 2163 TATTCCTCCCCCAGAAAAAACTTCTGAGGATATCCTTCTTTTCTTTAAACTCTATGACCC 2222 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 2040 TATTCCTCCCCCAGAAAAATCTTCTGAAGATATCCTTCTTTTCTTTAAACTCTATGACCC 2099 Query 2223 TGAGAACGCAGTACTAAGATATGTTGGCAGGCTAATGGTGAAAAGTTCCAGTAAGCCCAT 2282 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2100 TGAGAATGCAGTACTAAGATATGTTGGCAGGCTAATGGTGAAAAGTTCCAGTAAGCCCAT 2159 Query 2283 GGATATAGTAGGGCAATTGAATAAAATGGCTGGTTTTGCTCCTGATGAGGAAATAGAACT 2342 |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || || Sbjct 2160 GGATATAGTAGGGCAACTGAATAAAATGGCTGGTTTTGCTCCTGATGAGGAAATTGACCT 2219 Query 2343 TTTTGAGGAAATAAAGTTTGAACCTTGCGTAATGTGTGAACAGATTG-ATAAGAAGACTT 2401 |||||||||||| |||||||||||||| |||||||||||||| | || |||||||||||| Sbjct 2220 TTTTGAGGAAATTAAGTTTGAACCTTGTGTAATGTGTGAACA-ACTGGATAAGAAGACTT 2278 Query 2402 CTTTCAGGCTGTGTCAAATTGAAGATGGAGATATCATTTGTTATCAGAAACCTCTTTCTA 2461 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2279 CTTTCAGGCTGTGTCAAATTGAAGATGGAGATATCATTTGTTATCAGAAACCTCTATCTA 2338 Query 2462 TCGAGGAGAGTGAATTTCGATACCCAGATGTGCCATCATTTTTGGAGTATGTACAGAATC 2521 || |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2339 TCCAGGAGAGTGAATGTCGCTACCCAGATGTGCCATCATTTTTGGAGTATGTACAGAATC 2398 Query 2522 GAGAGCTGGTGCGTTTTCGCACACTGGAAAAACCAAAAGAGGATGAGTTTACTATGGAGC 2581 ||||||||||||||||||| |||||||||||||||||||| || || ||||||||||||| Sbjct 2399 GAGAGCTGGTGCGTTTTCGTACACTGGAAAAACCAAAAGAAGACGAATTTACTATGGAGC 2458 Query 2582 TGTCAAAGCTGCACACTTATGATGATGTAGTGGAAAGGGTGGCTGAGAAGCTTGGCCTTG 2641 ||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 2459 TGTCAAAGCAGCACACTTATGATGATGTTGTGGAAAGAGTGGCTGAGAAGCTTGGCCTTG 2518 Query 2642 ACGATCCATCAAAACTTAGGCTTACATCTCACAATTGCTACTCTCAGCAACCCAAGCCTC 2701 | |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 2519 ATGATCCATCGAAACTTAGACTTACATCTCACAATTGCTACTCCCAGCAACCCAAGCCTC 2578 Query 2702 AGCCAATCAAATACCGTGGAGTAGATCATCTTTCAGATATGTTAGTTCACTATAATCAGA 2761 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2579 AGCCAATCAAATACCGTGGAGTAGATCATCTTTCAGATATGTTAGTTCACTACAATCAGA 2638 Query 2762 CGTCTGACATATTGTATTATGAAGTTTTGGATATTCCTCTTCCAGAATTGCAAGGTCTTA 2821 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2639 CGTCTGACATTTTGTATTATGAAGTTCTGGATATTCCTCTTCCAGAATTGCAAGGTCTTA 2698 Query 2822 AGACTCTAAAAGTAGCTTTCCATAGTGCCACAAAGGATGAAGTGATAATCCACAATATCA 2881 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2699 AGACTCTAAAAGTGGCTTTCCATAGTGCCACAAAGGATGAAGTGATAATCCACAATATCA 2758 Query 2882 GACTACCTAAGCAGAGTACTGTTGGAGATGTTATTAACGAACTGAAAACAAAGGTGGAGC 2941 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2759 GACTACCTAAGCAGAGTACTGTTGGAGATGTTATTAACGATCTGAAAACAAAGGTGGAGC 2818 Query 2942 TTTCGCATCAAGATGCAGAACTGAGGTTACTTGAGGTCTTTTTCCACAAGATCTACAAGA 3001 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2819 TTTCGCATCAAGATGCAGAACTGAGGTTACTTGAGGTCTTTTTCCACAAGATCTACAAGA 2878 Query 3002 TCTTTCCATCTACTGAACGAATTGAAAACATCAATGACCAGTACTGGACTTTACGAGCAG 3061 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2879 TCTTTCCATCTACTGAAAGAATTGAAAACATCAATGACCAGTACTGGACTTTACGAGCAG 2938 Query 3062 AGGAGATACCTGAAGAAGAGAAGAATATTGGTCCCAATGATAGGTTAATTCACGTATATC 3121 | ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2939 AAGAGATACCTGACGAAGAGAAGAATATTGGTCCCAATGATCGGTTAATTCACGTATATC 2998 Query 3122 ATTTTACTAAAGAGGCCGGACAAAATCAGCAAGTTCAAAATTTTGGGGAACCCTTCTTTT 3181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2999 ATTTTACTAAAGAGGCCGGACAAAATCAGCAAGTACAAAATTTTGGGGAACCCTTCTTTT 3058 Query 3182 TGGTAATCCACGAAGGTGAAACTTTAGAAGAAATCAAGACCCGTATCCAAAAGAAACTCC 3241 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 3059 TGGTAATCCACGAAGGTGAAACTTTAGAAGAAATCAAGATCCGTATCCAAAAAAAACTCC 3118 Query 3242 ATGTCCCTGATGAGGACTTTGCCAAGTGGAAGTTTGCATCGTTTTCAATGGGACGTCCTG 3301 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct 3119 ATGTCCCTGATGAGGACTTTGCCAAGTGGAAGTTTGCATCTTTTTCATTGGGACGTCCTG 3178 Query 3302 ATTACTTGCTGGACACAGATGTTGTTTATAATCGCTTTCAGAGAAGAGATGTATACGGTG 3361 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 3179 ATTACTTGCAGGACACAGACGTTGTTTATAATCGCTTTCAGAGAAGAGATGTATACGGCG 3238 Query 3362 CGTGGGAGCAGTATCTTGGGTTGGAGCACATTGATAATGCTCCTAAAAGGGCTTATGCTG 3421 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 3239 CGTGGGAGCAGTATCTTGGGTTGGAGCACATTGACAATGCTCCTAAAAGGGCTTATGCTG 3298 Query 3422 CAAATCAGAACCGACACGCATACGAGAAGCCGGTGAAAATATACAATTAG 3471 | |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 3299 CGAATCAGAACCGACATGCATACGAGAAGCCGGTGAAAATATACAATTAG 3348 > Ahg487470 jgi|Araly1|487470|fgenesh2_kg.6__604__AT5G06600.1 Length=3842 Score = 3657 bits (1980), Expect = 0.0 Identities = 2983/3463 (86%), Gaps = 86/3463 (2%) Strand=Plus/Plus Query 53 ctttcattgttctctctg-ttcggc-g-ctctcttct-acttctctcGATCCGACCGT-G 107 |||| ||| || |||||| ||| | | ||||||| | ||| ||||||||| ||||| Sbjct 35 CTTTGATT-TT-TCTCTGCATCGTCGGTCTCTCTTTTGCCTT-TCTCGATCCCACCGTCA 91 Query 108 AATCAC-TAT-CGGAGCAATGACTATGATGACTCCGCC-GCCGCTAGATCAG-CAGGAAG 163 |||| | | | ||| |||||||||||||||||||||| ||| | |||||| || |||| Sbjct 92 AATC-CTTCTCCGG-CCAATGACTATGATGACTCCGCCTCCCG-TTGATCAGCCA-GAAG 147 Query 164 ACGAGGAGATGCTTGTTCCGAATCCGGATTTGGTCGA-GGGAC--CTCAGCCTATGGAAG 220 | |||||||||||||| |||||| | ||||||||||| || | ||||||| ||||||| Sbjct 148 ATGAGGAGATGCTTGTGCCGAATTCAGATTTGGTCGACGGTCCTGCTCAGCCCATGGAAG 207 Query 221 TTGCCCAAACTGATCCTGCTGCTACCGCTGTGGAGAATCCA-CCACCCGAGGATCCTCCA 279 || ||||| | || ||||||| | |||||||||| ||| ||| | ||||||||||| Sbjct 208 TTACCCAACCCGAGACTGCTGCGAGTACTGTGGAGAA-CCAGCCAGCTGAGGATCCTCCT 266 Query 280 AGTCTGAAATTCACGTGGACCATCCC-AATGTTCACTAGGCTCAATACCAGGAAGCATTA 338 | |||||||||||||||||| ||||| ||| ||| |||||| || |||||||||||||| Sbjct 267 ACTCTGAAATTCACGTGGACTATCCCTAAT-TTCTCTAGGCAAAACACCAGGAAGCATTA 325 Query 339 CTCTGACGTATTTGTTGTAGGCGGTTATAAGTGGCGTATATTGATTTTTCCC-AAAGGAA 397 ||| || |||||||| || || ||||| || ||||| ||||| | ||||||| ||||| | Sbjct 326 CTCCGATGTATTTGTCGTTGGAGGTTACAAATGGCGCATATT-AATTTTCCCGAAAGGGA 384 Query 398 ACAATGTCGACCATTTGTCAATGTACTTGGATGTTGCTGATGCTGCGAATTTGCCGTACG 457 ||||||| || |||||||| ||||||||||||||| |||||||||||| ||||||||||| Sbjct 385 ACAATGTTGATCATTTGTCCATGTACTTGGATGTTTCTGATGCTGCGAGTTTGCCGTACG 444 Query 458 GGTGGAGCAGATATTCACAGTTCAGTCTGGCTGTAGTGAATCAAGTCAACAACC-GATAT 516 | |||||||||||| | |||||||||||||||||||| |||||| || || || ||||| Sbjct 445 GATGGAGCAGATATGCTCAGTTCAGTCTGGCTGTAGTCAATCAAATCCAC-TCCAGATAT 503 Query 517 TCCATCAGAAAGGAGACGCAACATCAATTCAATGCAAGAGAAAGCGACTGGGGGTTTACA 576 |||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct 504 ACCATTAGAAAGGAGACGCAACATCAATTCAATGCTAGAGAAAGCGATTGGGGATTTACA 563 Query 577 TCATTCATGCCTCTCAGCGAGCTCTATGAACCCACTCGAGGATATTTAGTGAATGACACT 636 |||||||||||||| || || || ||||| || | | |||||||||||| |||||| ||| Sbjct 564 TCATTCATGCCTCTAAGTGAACTTTATGATCCTAGTAGAGGATATTTAGCGAATGATACT 623 Query 637 GTTCTGATTGAAGCTGAAGTTGCTGTGCGTAAAGTTCTTGATTATTGGTCATATGACTCa 696 ||| || ||||||||||||| ||||| ||||| ||||||||||| |||||||||||||| Sbjct 624 GTTTTGGTTGAAGCTGAAGTCGCTGTACGTAAGGTTCTTGATTACTGGTCATATGACTCT 683 Query 697 aaaaaaGAGACAGGTTTTGTTGGACTAAAAAACCAAGGTGCTACCTGTTACATGAATTCT 756 ||||||||||| |||||||||||||| || ||||||||||| || ||||||||||||||| Sbjct 684 AAAAAAGAGACTGGTTTTGTTGGACTCAAGAACCAAGGTGCAACTTGTTACATGAATTCT 743 Query 757 CTCCTGCAGACTTTATACCACATACCTTACTTTAGAAAGGCTGTTTACCACATGCCAACG 816 ||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct 744 CTCCTACAGACACTATACCACATACCTTACTTCAGAAAGGCTGTATACCACATGCCGACA 803 Query 817 ACTGAAAATGATGCACCTACCGCTAGTATCCCATTGGCGCTCCAGAGTTTATTTTACAAG 876 ||||| || ||| ||| || || ||||| || ||||| ||||| ||||| ||||||||| Sbjct 804 ACTGAGAACGATTTACCCACAGCAAGTATACCTTTGGCTCTCCAAAGTTTGTTTTACAAG 863 Query 877 CTTCAGTATAATGATACCAGTGTAGCGACAAAGGAGCTGACAAAGTCGTTTGGTTGGGAT 936 || || |||||||| || ||||| || |||||||||||||||||||| |||||||||||| Sbjct 864 CTCCAATATAATGACACTAGTGTTGCAACAAAGGAGCTGACAAAGTCTTTTGGTTGGGAT 923 Query 937 ACATATGATTCTTTTATGCAACATGATGTACAAGAACTCAA-CAGAGTTCTCTGTGAAAA 995 ||||||||||| ||||||||||||||||| ||||||||||| | | |||||||| ||||| Sbjct 924 ACATATGATTCCTTTATGCAACATGATGTGCAAGAACTCAATC-GGGTTCTCTGCGAAAA 982 Query 996 GCTTGAGGACAAGATGAAGGGAACTGTTGTGGAGGGAACAATACAA-AAGCTATTTGAAG 1054 |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| | Sbjct 983 GCTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGGAACAATACAACAA-CTATTTGAGG 1041 Query 1055 GTCACCACATGAATTACATTGAGTGCATTAATGTAGATTACAAATCTACACGGAAAGAGT 1114 | ||||| |||||||| ||||||||||| |||||||||| |||||| ||||||||||| | Sbjct 1042 GCCACCATATGAATTATATTGAGTGCATAAATGTAGATTTCAAATCGACACGGAAAGAAT 1101 Query 1115 CATTTTATGACCTCCAGCTTGATGTTAAAGGCTGCAAAGATGTATATGCTTCTTTTGACA 1174 ||||||| ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||||| Sbjct 1102 CATTTTACGACCTTCAGCTGGATGTGAAAGGCTGCAAGGATGTTTATGCTTCTTTTGACA 1161 Query 1175 AGTATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATACCATGCAGAAGGACATGATT 1234 ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| || Sbjct 1162 AGTATGTTGAAGTTGAACGTCTTGAAGGAGATAACAAATATCATGCAGAAGGACATGGTT 1221 Query 1235 TGCAGGATGCaaaaaaaGGTGTTCTATTCATAGACTTTCCACCAGTTCTTCAACTTCAGC 1294 | ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||| Sbjct 1222 TACAGGATGCAAAAAAAGGTGTTCTTTTCATTGACTTTCCACCGGTTCTTCAACTCCAGC 1281 Query 1295 TCAAGAGGTTTGAATACGATTTTATGAGGGACACAATGGTGAAGATTAATGATCGGTATG 1354 |||||||||||||||| || |||||||||||||| ||||| ||||| || |||||||||| Sbjct 1282 TCAAGAGGTTTGAATATGACTTTATGAGGGACACCATGGTAAAGATAAACGATCGGTATG 1341 Query 1355 AGTTTCCTCTCCAACTGGATCTCGACAGAGAAGATGG-AAGATATTTATCCCCTGATGCA 1413 |||||||||| |||||||||| || |||||| |||| ||| ||| | || |||||||| Sbjct 1342 AGTTTCCTCTTGAACTGGATCTTGATAGAGAAAATGGAAAG-TATCTGTCTCCTGATGCT 1400 Query 1414 GACAAGAGTGTCCGCAATCTCTACACCCTCCACAGTGTCTTGGTTCACAGTGGAGGAGTG 1473 |||| |||||||||||| || || || || ||||||||||| ||||| ||||||||||| Sbjct 1401 GACAGGAGTGTCCGCAACCTTTATACTCTTCACAGTGTCTTAGTTCATAGTGGAGGAGTA 1460 Query 1474 CATGGAGGGCATTATTATGCTTTTATTAGGCCAACACTTTCAGATCAGTGGTATAAATTT 1533 ||||| ||||| ||||| |||||||| || || || || ||||||||||||||||||||| Sbjct 1461 CATGGTGGGCACTATTACGCTTTTATAAGACCTACGCTCTCAGATCAGTGGTATAAATTT 1520 Query 1534 GACGATGAACGGGTCACGAAA-GAAGATGTCAAAAGAGCACTGGAAGAGCAATATGGTGG 1592 || |||||||| || || ||| |||||| | ||||| ||| |||| |||||||||||||| Sbjct 1521 GATGATGAACGCGTAAC-AAAGGAAGATTTGAAAAGGGCATTGGAGGAGCAATATGGTGG 1579 Query 1593 TGAAGAAGAGTTACCGCAGAATAATCCTGGTTTCAATAATCCACCTTTCAAATTCACAAA 1652 |||||||||| |||| |||| |||||||||||||||||| || ||||||||||||||||| Sbjct 1580 TGAAGAAGAGCTACCACAGACTAATCCTGGTTTCAATAACCCTCCTTTCAAATTCACAAA 1639 Query 1653 ATACTCGAATGCATACATGCTTGTTTATATTCGGGAAAGTGACAAGGATAAGATAATCTG 1712 ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1640 GTACTCGAATGCTTACATGCTTGTTTATATCCGGGAAAGTGACAAGGATAAAATAATCTG 1699 Query 1713 CAACGTTGATGAGAAAGACATTGCGGAACATTTGCGGGTGAGGCTgaaa-aaagaacaag 1771 ||||||||||||||||||||| || |||||||| |||||||||| ||| ||||| |||| Sbjct 1700 CAACGTTGATGAGAAAGACATAGCAGAACATTTAAGGGTGAGGCT-AAAGAAAGAGCAAG 1758 Query 1772 aagaaaaggaagataaaagaaaaTACAAGGCTCAAGCTCACCT-TTTCACGACAATCAAG 1830 ||||||||||||||||||||| ||||||||| ||||||||||| | | || | ||| ||| Sbjct 1759 AAGAAAAGGAAGATAAAAGAAGATACAAGGCACAAGCTCACCTATAT-ACAATAATTAAG 1817 Query 1831 GTCGCAAGAGATGATGA-CATCACTGAGCAAATTGGAAAGAATATATATTTTGATCTTGT 1889 || ||||||||||| || | | | || ||||| || ||| ||||||||||||||||||| Sbjct 1818 GTTGCAAGAGATGAAGATC-TTAAGGAACAAATCGGGAAGGATATATATTTTGATCTTGT 1876 Query 1890 TGATCATGAAAAAGTGAGGAGTTTTCGAATCCAGAAACAGACCCCCTTTCAACAATTTAA 1949 || ||||| ||||| | ||||| || |||||||||||||| || |||||||| ||||| Sbjct 1877 GGACCATGACAAAGTTCGCAGTTTCCGTATCCAGAAACAGACACCATTTCAACAGTTTAA 1936 Query 1950 GGAAGAGGTAGCCAAAGAGTTTGGTGTCCCGGTTCAACTACAGCGGTTCTGGATCTGGGC 2009 ||| |||||||||||||| |||||||| || ||||| ||||| |||||||||| ||||| Sbjct 1937 GGAGGAGGTAGCCAAAGAATTTGGTGTACCTGTTCAGTTACAGAGGTTCTGGATTTGGGC 1996 Query 2010 AAAGCGTCAAAACCATACTTACCGCCCCAATCGTCCCC-TATCACCT-AATGAAGAATTA 2067 ||||| ||||||||||| || || |||||||| |||| || | ||| || || |||||| Sbjct 1997 TAAGCGACAAAACCATACCTATCGTCCCAATCGCCCCCTTA-CGCCTCAA-GAGGAATTA 2054 Query 2068 CAGAC-GGTTGGACAAATACGAGAGGCATCTAACAAGGCAAACAATGCTGAGCTAAAGCT 2126 || || ||||||||||||| |||| ||||||||||||||||||| ||| || |||||||| Sbjct 2055 CA-ACAGGTTGGACAAATAAGAGAAGCATCTAACAAGGCAAACACTGCAGAACTAAAGCT 2113 Query 2127 GTTT-TTGGAAATAGAGCGTGGACC-GGA-TGACCTTCCTATTCCTCCCCCAGAAAAAAC 2183 ||| ||||| |||||| ||| ||| | | | |||||||||||| || |||||| | Sbjct 2114 -TTTCCTGGAAGTAGAGC----ACCTGGATTTA-CGTCCTATTCCTCCTCCTGAAAAATC 2167 Query 2184 TTCTGAGGATATCCTTCTTTTCTTTAAACTCTATGACCCTGAGAACGCAGTACTAAGATA 2243 || ||||| || ||||||||||| || |||||||| ||||| |||||| |||| || Sbjct 2168 AAAAGAAGATATTCTGCTTTTCTTTAAGCTTTATGACCCCGAGAAGGCAGTATTAAGCTA 2227 Query 2244 TGTTGGCAGGCTAATGGTGAAAAGTTCCAGTAAGCCCATGGATAT-AGTAGGGCAA-TTG 2301 || |||||||| ||||||||||||||||||||||| |||||||| | | || || || Sbjct 2228 TGCAGGCAGGCTGATGGTGAAAAGTTCCAGTAAGCCTATGGATATAACT-GGAAAACTT- 2285 Query 2302 AATAAAATGGCTGGTTTTGCTCCTGATGAGGAAATAGAACTTTTTGAGGAAATAAAGTTT 2361 ||| |||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 2286 AATGAAATGGTTGGCTTTGCTCCTGATGAAGAAATAGAACTTTTTGAGGAAATCAAGTTT 2345 Query 2362 GAACCTTGCGTAATGTGTGAACAGATT-GATAAGAAGACTTCTTTCAGGCTGTGTCAAAT 2420 |||||||| || ||||| ||||| || |||||||| ||||| ||||| |||||||||| Sbjct 2346 GAACCTTGTGTTATGTGCGAACA-CTTGGATAAGAAAACTTCATTCAGATTGTGTCAAAT 2404 Query 2421 TGAAGATGGAGATATCATTTG-TTATCAGAAACCTCT-TTCTATCGAGGAGAGTGAATTT 2478 |||||||||||| |||||||| || |||||||||||| | || | |||||| ||| | Sbjct 2405 TGAAGATGGAGACATCATTTGCTT-TCAGAAACCTCTAGT-TAACAAGGAGATTGAGTGC 2462 Query 2479 CGATACCCAGATGTGCCATCATTT-TTGGAGTATGTACAGAATC-GAGAGCTGGTGCGTT 2536 || ||||||| |||||| || ||| || || ||||| ||||| | || ||||||| || | Sbjct 2463 CGCTACCCAGCTGTGCCTTCGTTTCTT-GAATATGTCCAGAA-CAGACAGCTGGTCCGGT 2520 Query 2537 TTCGCACACTGGAAAAACCAAAAGAGGATGAGTTTACTATGGAGCTGTCAAAGCTGCACA 2596 |||| | ||||||||||| ||||| ||||||||| | ||||| |||| |||||||||| Sbjct 2521 TTCGTGCTCTGGAAAAACCTAAAGAAGATGAGTTTGTTCTGGAGTTGTCGAAGCTGCACA 2580 Query 2597 CTTATGATGATGTAGTGGAAAGGGTGGCTGAGAAGCTTGGCCTTGACGATCCATCAAAAC 2656 ||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||| |||| Sbjct 2581 CTTATGACGATGTTGTGGAAAAAGTGGCTGAGAAGCTTGGTCTTGACGATCCATCCAAAC 2640 Query 2657 TTAGGCTTACATCTCACAATTGCTACTCTCAGCAACCCAAGCCTCAGCCAATCAAATACC 2716 ||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||| Sbjct 2641 TTAGGCTTACATCTCACAATTGCTATTCCCAGCAACCTAAGCCTCAGCCTATCAAATACC 2700 Query 2717 GTGGAGTAGATCATCTT-TCAGATATGTTAGTTCACTATAATCAGACGTCTGACATATTG 2775 |||||||||| ||| || |||||||||||||||||||| ||||||||||||||||| ||| Sbjct 2701 GTGGAGTAGACCAT-TTGTCAGATATGTTAGTTCACTACAATCAGACGTCTGACATTTTG 2759 Query 2776 TATTATGAAGTTTTGGATATTCCTCTTCCAGAATTGCAAGGTCTTAAGA-CTCTAAAAGT 2834 |||||||||||| |||| ||||||||||||||||||||||||||||| | || ||||||| Sbjct 2760 TATTATGAAGTTCTGGACATTCCTCTTCCAGAATTGCAAGGTCTTAAAACCT-TAAAAGT 2818 Query 2835 AGCTTTCCAT-AGTGCCACAAAGGATGAAGTGATAATCCACAATATCAGACTACCTAAGC 2893 ||||||||| | |||||| ||||| |||||| ||||||||||||||||||||||||| | Sbjct 2819 TGCTTTCCATCA-TGCCACGAAGGAAGAAGTGGTAATCCACAATATCAGACTACCTAAAC 2877 Query 2894 AGAGTACTGTTGGAGATGTTATTAACGAACTGAAAACAAAGGTGGAGCTTTCGCATCAAG 2953 | || || || |||||||||||||| ||||| ||||||||||||||||||||||||| || Sbjct 2878 AAAGCACGGTCGGAGATGTTATTAATGAACTTAAAACAAAGGTGGAGCTTTCGCATCCAG 2937 Query 2954 ATGCAGAACTGAGGTTACTTGAGGTCTTTTTCCACAAGATCTACAAGATCTTT-CCATCT 3012 ||||||||||||| || || ||||| |||| |||||||||||||||||| ||| ||||| Sbjct 2938 ATGCAGAACTGAGATTGCTCGAGGTGTTTTACCACAAGATCTACAAGAT-TTTCCCATCA 2996 Query 3013 ACTGAACGAATTGAAAACATCAATGACCAGTACTGGACTTTACGAGCAGAGGAGATACCT 3072 |||||| ||||||| || || |||||||||||||||||||||||||| |||||||| || Sbjct 2997 ACTGAAAGAATTGAGAATATAAATGACCAGTACTGGACTTTACGAGCTGAGGAGATTCCG 3056 Query 3073 GAAGAAGAGAAGAATATTGGTCCCAATGATAGGTTAATTCACGTATATCATTTTACTAAA 3132 ||||||||||||||||| ||||| |||||| | ||||||| || || |||||| |||| Sbjct 3057 GAAGAAGAGAAGAATATCGGTCCAAATGATCGCTTAATTCTTGTGTACCATTTTGCTAAG 3116 Query 3133 GAGGCCGGACAAAATCAGCAAGTTCAAAATTTTGGGGAACCCTTCTTTTTGGTAATCCAC 3192 ||| | ||||||||||||||||| ||||| ||||| || |||||||| ||||||||||| Sbjct 3117 GAGACTGGACAAAATCAGCAAGTGCAAAACTTTGGCGAGCCCTTCTTCTTGGTAATCCAT 3176 Query 3193 GAAGGTGAAACT-TTAGAAGAAATCAAGACCCGTATCCAAAAGAAACTCCATGT-CCCTG 3250 |||||||||||| || |||||||| |||| ||||||||||||||| || ||||| || | Sbjct 3177 GAAGGTGAAACTCTT-GAAGAAATAAAGAACCGTATCCAAAAGAAGCTTCATGTATCC-G 3234 Query 3251 ATGAGGACTTTGCCAAGTGGAAGTTTGCATCGTT-T-TCAATGGGACGTCCTGATTACTT 3308 |||||||||||||||||||||||||||| | || | |||||||| ||||| || ||||| Sbjct 3235 ATGAGGACTTTGCCAAGTGGAAGTTTGCGT--TTATGTCAATGGGGCGTCCAGAGTACTT 3292 Query 3309 GCTGGACACAGATGTTGTTTATAATCGCTTTCAGAGAAGAGATGTATACGGTGCGTGGGA 3368 | |||||||||||||||||||||||||||||||||||||||||| || ||||| | || Sbjct 3293 ACAGGACACAGATGTTGTTTATAATCGCTTTCAGAGAAGAGATGTCTATGGTGCTTTTGA 3352 Query 3369 GCAGTATCTTGGGTTGGAGCACATTGATAATGCTCCTAAAAGGGCTTATGCTGCAAATCA 3428 |||||| || ||||||||||| ||| | | ||||||| ||||||||||||||||| || Sbjct 3353 GCAGTACCTCGGGTTGGAGCATGCTGACACTACTCCTAAGAGGGCTTATGCTGCAAACCA 3412 Query 3429 GAACCGACACGCATACGAGAAGCCGGTGAAAATATACAATTAG 3471 |||||| ||||| |||||||||||||||||||||||||||||| Sbjct 3413 GAACCGCCACGCTTACGAGAAGCCGGTGAAAATATACAATTAG 3455 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 145151583422 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5