BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G12220.1 Length=1412 Score E Sequences producing significant alignments: (Bits) Value Ahg928947 jgi|Araly1|928947|scaffold_301404.1 1493 0.0 Ahg478582 jgi|Araly1|478582|fgenesh2_kg.3__1283__AT3G12220.1 1439 0.0 Ahg481165 jgi|Araly1|481165|fgenesh2_kg.4__225__AT2G22980.2 553 1e-156 Ahg932263 jgi|Araly1|932263|scaffold_400251.1 477 9e-134 > Ahg928947 jgi|Araly1|928947|scaffold_301404.1 Length=1350 Score = 1493 bits (808), Expect = 0.0 Identities = 1159/1328 (87%), Gaps = 26/1328 (2%) Strand=Plus/Plus Query 98 AAAAAGAATGGGTTCATGGATACCCAAGTTGCTGCTGCTGCAACTTGTGCTTCTGTTGAC 157 ||||||||||| ||| |||||| ||||||||||||||||||| |||||||| |||||| Sbjct 14 AAAAAGAATGGCTTCCTGGATATTCAAGTTGCTGCTGCTGCAATTTGTGCTTGTGTTGAT 73 Query 158 T-AAGCATGCTGATTCAAGTTCTATCATCAAATATCTTCCTGGTTTTGAAGGCCCTCTTC 216 | || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 74 TCAA-CATGCTGATTCAGGTTCTATCATCAGATATCTTCCTGGTTTTGAAGGCCCTCTTC 132 Query 217 CCTTCGAGCTCGAAACCGGGTACATTGGTGTTGGTGAGGAAGATGAAGATCAAATGTTCT 276 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 133 CCTTCGAGCTTGAAACCGGGTACATTGGTGTTGGTGAGGAAGATGAAGATCAAATGTTTT 192 Query 277 ACTACTTCATCAAATCTGAGAGCAATCCA-AAAACAGACCCTCTTCTTCTCTGGCTAAGT 335 ||||||||||||||||||||||||||||| | | ||||||||||||| ||||| ||| Sbjct 193 ACTACTTCATCAAATCTGAGAGCAATCCAGATGA-AGACCCTCTTCTTGTCTGGTTAACA 251 Query 336 GGAGGACCTGGTTGCTCTTCTTTCACTGGTCTTATATATGAGAACGGGCCACTTGGTTTC 395 ||||||||||| |||||||||||| |||||||| | |||||||| ||||| |||| |||| Sbjct 252 GGAGGACCTGGCTGCTCTTCTTTCTCTGGTCTTGTTTATGAGAATGGGCCTCTTGCTTTC 311 Query 396 AAGGTTGAGGCGTACAATGGAAGTATCCCCACGTTGGTCTCTACTACATATTCATGGACA 455 ||||||||| | |||||||||||||| || |||||||| |||||||||||||||||||| Sbjct 312 AAGGTTGAGACTTACAATGGAAGTATACCAACGTTGGTTTCTACTACATATTCATGGACT 371 Query 456 AAGGTTGCGAATATAATCTATTTAGATCAACCTGTTGGGACTGGCTTCTCCTACTCAAGA 515 ||||| || || ||||| ||||| || || |||||||||||||||||||||||| ||| | Sbjct 372 AAGGTGGCCAACATAATATATTTGGACCAGCCTGTTGGGACTGGCTTCTCCTACGCAAAA 431 Query 516 AATCCACTTGCTGATATACCAAGTGACACAGGATCAGCTAAGCGGGTCGATGAGTTTCTT 575 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| || Sbjct 432 AATCCACTTGCTGATATACCAAGTGACACAGGATCAGCTAAGCGGGTCAACGAGTTTGTT 491 Query 576 CGTAAATGGCTAACCAAGCATCCTGAGTATTTCTCCAACCCTTTCTATGCCGGTGGAAAT 635 ||||| ||||| | ||||||||||| ||||||||||| |||||||||| | |||||| Sbjct 492 CGTAAGTGGCTTGCTAAGCATCCTGATTATTTCTCCAATCCTTTCTATGTCACCGGAAAT 551 Query 636 TCTTATTCCGGTAAGATGGTTCCGGTCATCGTTCAAGAAATCTCAAATGGAAATTGTATT 695 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||| ||| Sbjct 552 TCTTATTCCGGTAAGGTGATTCCGGCCATCGTTCAAGAAATCTCAAATGGAAATTATATA 611 Query 696 TACGGCAAACCTCAAATAAGGCTTCAGGGCTATGTGCTCGGAAGTCCGGTAACAGACT-A 754 | | ||||||||||||||| ||||||||||||||| | |||| ||||||||||||| | Sbjct 612 TGCTGCAAACCTCAAATAAATCTTCAGGGCTATGTGATTGGAAACCCGGTAACAGACTCA 671 Query 755 TGATCTTGATAGAA-ATTCTCGTATTCAATTTGCTCATGGAATGGCACTT-ATCTCTAAT 812 | || ||||| || | ||||| |||| ||||||||||||||||||| || |||||| || Sbjct 672 -GCTCATGATA-AAGACTCTCGCATTCCATTTGCTCATGGAATGGCA-TTGATCTCTGAT 728 Query 813 GAACTCTATGAGTCGATGAAGAGAA-CTTGTGGAGGAAACTATATTTTTGTAGATCCTCT 871 ||||| | ||||||||||||||||| || || ||||| ||||| | ||||||||||||| Sbjct 729 GAACTATTTGAGTCGATGAAGAGAAGCT-GTAAAGGAAGCTATAGTATTGTAGATCCTCT 787 Query 872 TAACACAGAATGCTTGGAACTCATAAAAGACTATGACAACTGTGTTTCTGGAATATATGA 931 ||| |||||||||||| ||||| | |||| ||| |||| |||||||||||||||||||| Sbjct 788 TAATACAGAATGCTTGAAACTCGTTGAAGATTATCACAAGTGTGTTTCTGGAATATATGA 847 Query 932 A-AATCTTATCCTCGTACCAAAATGTGAC-CTTACATCTCCTGATTGCCATTCGTATCGG 989 | || ||||| || |||| ||||||| || |||||||||||||| || |||||||| Sbjct 848 AGAA-CTTATTCTTAAACCACAATGTGAGACT-ACATCTCCTGATTGTTATACGTATCGG 905 Query 990 TCTATGCTATCCGATTACTGGGCTAATAACGAGAGCGTACGCAGAGCACTTAAAGTTGTG 1049 | | ||||||| || || |||||||||||||||||||| ||||||||||| ||| |||| Sbjct 906 TATTTGCTATCTGAATATTGGGCTAATAACGAGAGCGTCCGCAGAGCACTCAAAATTGTC 965 Query 1050 GAGGGTACTACAGGTAGATGGGAACGATGTAAATGGACTTTGCAAAACAATAAAGACATT 1109 |||| |||| ||| | ||||||||||||| | |||| | ||| ||||||||||||| Sbjct 966 AAGGGGACTAAAGGGAAATGGGAACGATGTGATTGGAGTGTGCTTTGCAATAAAGACATT 1025 Query 1110 AAAAGCAGCATACCATACCATAAGAAGAACAGCATCCAAGGCTATCGATCTCTTA-TC-T 1167 |||||||||||||| ||||||| | | ||||||||| |||||||||||||||| | || | Sbjct 1026 AAAAGCAGCATACCGTACCATATGTATAACAGCATCAAAGGCTATCGATCTCT-AGTCAT 1084 Query 1168 TCAGTGGTGATCACGACATG-CTAA-CACCTTACGTTGGAACTCAAG-ACTGGATAAGAT 1224 | || ||||||||||| || | || | |||| |||||||||||||| | |||||||||| Sbjct 1085 T-AGCGGTGATCACGATTTGAC-AATC-CCTTTCGTTGGAACTCAAGCA-TGGATAAGAT 1140 Query 1225 CTCTCAACTATTCCATTATTGACAAATGGAGGCCATGGATGATACTTGATCAAGTCGCTG 1284 |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||| | Sbjct 1141 CTCTCAACTATTCCATTACTGAAAAATGGAGGCCATGGATGATACTCGATCAAGTCGCCG 1200 Query 1285 GATACACTACGACTTACGCTAATAAGATGACATTTGCTACTGTGAAAGGTGGCGGGCACA 1344 ||||||| | |||||| || ||||||||||||||||| ||||||||||| || ||||||| Sbjct 1201 GATACACCAAGACTTATGCCAATAAGATGACATTTGCCACTGTGAAAGGAGGTGGGCACA 1260 Query 1345 CGTTAGACTATAAACCAGATGAGAATTCAATCTTGTTCAAGAGGTGGATAAGTGGCCAAC 1404 | || || ||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 1261 CATTGGAATATAAACCAGAGGAGAATTCAATCTTGTTCAAGAGGTGGATAAGTGGTCAAC 1320 Query 1405 TTCTTTAA 1412 ||||||| Sbjct 1321 CTCTTTAA 1328 > Ahg478582 jgi|Araly1|478582|fgenesh2_kg.3__1283__AT3G12220.1 Length=1399 Score = 1439 bits (779), Expect = 0.0 Identities = 1139/1304 (87%), Gaps = 60/1304 (5%) Strand=Plus/Plus Query 98 AAAAAGAATGGGTTCATGGATACCCAAGTTGCTGCTGCTGCAACTTGTGCTTCTGTTGAC 157 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 64 AAAAAGAATGGGTTCATGGATACCCAAGTTTCTGCTGCTGCAACTTGTGCTTCTGTTGAC 123 Query 158 TAAGCATGCTGATTCAAGTTCTATCATCAAATATCTTCCTGGTTTTGAAGGCCCTCTTCC 217 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 124 TAAGCATGCTGATTCAAGTTCTATCATCAGATATCTTCCTGGTTTTGAAGGCCCTCTTCC 183 Query 218 CTTCGAGCTCGAAACCGGGTACATTGGTGTTGGTGAGGAAGATGAAGATCAAATGTTCTA 277 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 184 CTTCGAGCTCGAAACCGGGTACATTGGTGTTGGTGATGAAGAGGAAGATCAAATGTTCTA 243 Query 278 CTACTTCATCAAATCTGAGAGCAATCCAAAA-ACAGACCCTCTTCTTCTCTGGCTAAGTG 336 |||||||||||||||||||||||||||| || | ||||||||||||| ||||| ||| || Sbjct 244 CTACTTCATCAAATCTGAGAGCAATCCAGAAGA-AGACCCTCTTCTTGTCTGGTTAACTG 302 Query 337 GAGGACCTGGTTGCTCTTCTTTCACTGGTCTTATATATGAGAACGGGCCACTTGGTTTCA 396 ||||||||| |||||||||||| |||||||| | |||||||| ||||| |||| ||||| Sbjct 303 CAGGACCTGGCTGCTCTTCTTTCTCTGGTCTTGTTTATGAGAATGGGCCTCTTGCTTTCA 362 Query 397 AGGTTGAGGCGT-ACAATGGAAGTATCCCCACGTTGGTCTCTACTACATATTCATGGACA 455 ||||| ||| || ||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 363 AGGTTAAGG-GTTACAATGGAAGTATTCCCACGTTGGTTTCTACTACATATTCATGGACT 421 Query 456 AAGGTTGCGAATATAATCTATTTAGATCAACCTGTTGGGACTGGCTTCTCCTACTCAAGA 515 ||||| || | | || ||| ||||| | | | || ||| | | | | || Sbjct 422 AAGGT----AACACCAGCT-TTTGGATCA---T-T-G---CTT-CTT-T--T--T-A-GA 460 Query 516 AATCCACTTGCTGATATACCAAGTGACACAGGATCAGCTAAGCGGGTCGATGAGTTTCTT 575 |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct 461 AATCCACTTGCTGATATATCAAGTGACACAGGATCAACTAAGCGGGTCGACGAGTTTCTT 520 Query 576 CGTAAATGGCTAACCAAGCATCCTGAGTATTTCTCCAACCCTTTCTATGCCGGTGGAAAT 635 | ||| | |||| ||||| |||||||||||||| |||||||| | | || ||| Sbjct 521 CCTAA--G-CTAA----GCATC--GAGTATTTCTCCAATCCTTTCTACGTCACCGGCAAT 571 Query 636 TCTTATTCCGGTAAGATGGTTCCGGTCATCGTTCAAGAAATCTCAAATGGAAATTGTATT 695 ||||| ||||||||| || ||||||| |||||||||||||||||||||||||| ||||| Sbjct 572 TCTTACTCCGGTAAGTTGATTCCGGTTATCGTTCAAGAAATCTCAAATGGAAACTGTATA 631 Query 696 TACGGCAAACCTCAAATAAGGCTTCAGGGCTATGTGCTCGGAAGTCCGGTAACAGACTAT 755 | | ||||||||||||||| ||||||||||||||||||||||| ||||| ||||| | | Sbjct 632 TGCTGCAAACCTCAAATAAATCTTCAGGGCTATGTGCTCGGAAGCCCGGTTACAGATTCT 691 Query 756 GATCTTGATAGAAATTCTCGTATTCAATTTGCTCATGGAATGGCACTTATCTCTAATGAA 815 || ||| ||| ||| ||||| ||||||| ||||||| ||||| |||| || ||| ||||| Sbjct 692 GAACTTAATAAAAACTCTCGCATTCAATATGCTCATAGAATGTCACTCATATCTGATGAA 751 Query 816 CTCTATGAGTCGATGAAGAGAA-CTTGTGGAGGAAACTATATTTTTGTAGATCCTCTTAA 874 ||||| |||||||||||||||| || ||||||||||||||||| ||||||||||||| || Sbjct 752 CTCTACGAGTCGATGAAGAGAAGCT-GTGGAGGAAACTATATTATTGTAGATCCTCTAAA 810 Query 875 CACAGAATGCTTGGAACTCATAAAAGACTATGACAACTGTGTTTCTGGAATATATGAAAA 934 |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 811 CACACAATGCTTGGAACTCATTAAAGACTATGACAAGTGTGTTTCTGGAATATATGAAAA 870 Query 935 TCTTATCCTCGTACCAAAATGTGACCTTACATCTCCTGATTGCCA-TTCGT-ATCGGT-C 991 |||||||||| ||||||||||||||||||||||||||||||||| || | || | | | Sbjct 871 CCTTATCCTCGCACCAAAATGTGACCTTACATCTCCTGATTGCCAATTTGCCAT-GTTGC 929 Query 992 TATG-CTA-TCCGATTACTGGG-CTAATAACGAGAGCGTACGCAGAGC-ACTTAAAGTTG 1047 |||| | | || | | | | || ||| | | | || | | | || | | || | | Sbjct 930 TATGGC-AGTC-G-T-A-TCGGTCTA-TG-CTATC-CGAATACTGGGCCAAT-AACGA-G 979 Query 1048 TGGAGGGTACTACAGGTAGATGGG-AACGATGTAAATGGACTTTGCAAAACAATAAAGAC 1106 | || ||||||||||| ||||| ||||||||||||||| |||||||| |||||||||| Sbjct 980 AGC-GG-TACTACAGGTA-ATGGGGAACGATGTAAATGGAGTTTGCAAAGCAATAAAGAC 1036 Query 1107 ATTAAAAGCAGCATACCATACCATAAGAAGAACAGCATCCAAGGCTATCGATCTCTTATC 1166 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| Sbjct 1037 ATTAAAAGCAGCATACCATACCATAAAAAGAACAGCATCGAAGGCTATCGATCTCTCATC 1096 Query 1167 TTCAGTGGTGATCACGACATGCTAACACCTTACGTTGGAACTCAAGACTGGATAAGATCT 1226 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 1097 TTCAGTGGTGATCACGACATGCTAACACCTTACATTGGAACTCAAGACTGGATCAGATCT 1156 Query 1227 CTCAACTATTCCATTATTGACAAATGGAGGCCATGGATGATACTTGATCAAGTCGCTGGA 1286 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1157 CTTAACTATTCCATTATTGACAAATGGAGGCCATGGATGATACTTGATCAAGTCGCTGGA 1216 Query 1287 TACACTACGACTTACGCTAATAAGATGACATTTGCTACTGTGAAAGGTGGCGGGCACACG 1346 |||||||||||||| ||||| | |||||||||||| || |||||||| || ||||||||| Sbjct 1217 TACACTACGACTTATGCTAACAGGATGACATTTGCAACAGTGAAAGGAGGAGGGCACACG 1276 Query 1347 TTAGACTATAAACC-AGATGAGAATTCAATCTTGTTCAAGAGGT 1389 |||||||||||||| | | |||||||||||||||||| |||||| Sbjct 1277 TTAGACTATAAACCCA-AGGAGAATTCAATCTTGTTCCAGAGGT 1319 Score = 100 bits (54), Expect = 2e-20 Identities = 60/63 (95%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 6 TAAACAAAGACTAAAAGATGTTTGTTTGGGTCAACGTCTCTGTTTTCCAAGATAAAGATG 65 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 1 TAAACAAAGACTAAAAGATGTTTGTTTGGGTCAACGTCTCTGTTTTTGAAGATAAAAATG 60 Query 66 TTT 68 ||| Sbjct 61 TTT 63 > Ahg481165 jgi|Araly1|481165|fgenesh2_kg.4__225__AT2G22980.2 Length=1378 Score = 553 bits (299), Expect = 1e-156 Identities = 938/1237 (76%), Gaps = 82/1237 (7%) Strand=Plus/Plus Query 124 AGTTGCTGCTGCTGC-AACTTGTGCTTCTGTTGACTAAGCATGCTGATTCAAGTTCTATC 182 |||| ||||| || | || |||| ||| | |||| | | |||||| |||| | ||||| Sbjct 149 AGTTTCTGCTACTTCTAA-TTGTACTTGTCTTGAGTTACCATGCTCATTCTGGCTCTATT 207 Query 183 ATCAAATATCTTCCTGGTTTTGAAGGCCCTCTTCCCTTCGAGCTCGAAACCGGGTACATT 242 |||||| ||||||||||||||||||||||||||| || || || ||||||||||| ||| Sbjct 208 GTCAAATTTCTTCCTGGTTTTGAAGGCCCTCTTCCTTTTGAACTTGAAACCGGGTATATT 267 Query 243 GGTGTTGGTGAGGAAGATGAAGAT-CAAATGTTCTACTACTTCATCAAATCTGAG-AGCA 300 ||| ||||||||||||| |||| | ||| |||| ||||| ||||| ||||||||| || | Sbjct 268 GGTATTGGTGAGGAAGAGGAAG-TGCAATTGTTTTACTATTTCATAAAATCTGAGAAG-A 325 Query 301 ATCCAAAA-ACAGACCCTCTTCTTCTCTGGCTAAGTGGAGGACCTGGTTGCTCTTCTTTC 359 |||||||| | ||||||||||||||| ||| ||| |||||| ||||| || || ||| || Sbjct 326 ATCCAAAAGA-AGACCCTCTTCTTCTATGGTTAACTGGAGGGCCTGGATGTTCCTCTCTC 384 Query 360 ACTGGTCTTATATATGAGAACGGGCCACTTGG-TTTCAAGGTTGAGGCGTACAATGGAAG 418 ||||| ||| | | |||||| || || ||| ||| ||| |||||| ||||||||||| Sbjct 385 ACTGGCCTTCTTTTTGAGAATGGACC-GGTGGCTTTGAAGTTTGAGGTTTACAATGGAAG 443 Query 419 TATCCCCA-CGTTGGTCTCTACTACATATTCATGGACAAAGGTTGCGAATATAATCTAT- 476 | | ||| | |||||||||||||||||||||||||||||| | || || ||||| | | Sbjct 444 TGT-TCCATCTTTGGTCTCTACTACATATTCATGGACAAAGATGGCCAACATAATAT-TC 501 Query 477 TTAGATCAACCTGTTGG-GACTGGCTTCTCCTACTCAAGAAATCCACTTGCTGATATACC 535 || ||||| |||||||| | ||||||||||||| ||||||| |||||||| ||||| | Sbjct 502 TTGGATCAGCCTGTTGGAG-CTGGCTTCTCCTATTCAAGAACTCCACTTGTTGATAAAAT 560 Query 536 AAGTGACACAGGATCA-GCTAAGCGGG-TCGATGAGTTTCTTCGTAAA-TGGCTAACCAA 592 |||||||| || | | | ||| ||| || |||||||||||| ||| ||| ||| ||| Sbjct 561 TAGTGACACGGG-TGAAGTTAAA-GGGATCTATGAGTTTCTTCA-AAAGTGGTTAAGCAA 617 Query 593 GCATCCTGAGTATTTCTCCAACCCTTT-CTATGCCGGTGGAAATTCTTATTCCGGTAAGA 651 |||| | | ||| ||||||||||| | ||| || ||| ||||||||||||||| | Sbjct 618 ACATCAACAATTTTTTTCCAACCCTTTTC-ATGTTGGCGGAGATTCTTATTCCGGTATGG 676 Query 652 TGGTTCCGGTCATCGTTCAAGAAATCT-CAAATGGAAATTGTATTTACGGCAAACCTCAA 710 | ||||| | | | ||||||||||| | |||| ||||||| || | ||| | || Sbjct 677 TTGTTCCCGCCCTAGTTCAAGAAAT-TGCAAAAGGAAATT--AT---C---AAA--T-AA 724 Query 711 ATAAGGCTTCAGGGCTATGTGCTCGGAAGTCCGGTAACAGACTA-TGA-TCTTGAT-AGA 767 || || ||||| ||| | ||||||| ||| ||||||| || ||| ||| || ||| Sbjct 725 AT----CTACAGGGTTATATCCTCGGAAACCCGATAACAGA-TACTGAATCT-GAACAGA 778 Query 768 AAT-TCTCGTATTCAATTTGCTCATGGAATGGCACTTA-TCTCTAATGAACTCTATGAGT 825 | | || | |||| || |||||||||||||||| ||| ||||| ||||||| || |||| Sbjct 779 ACTATCA-G-ATTCCATATGCTCATGGAATGGCA-TTAATCTCTGATGAACTATACGAGT 835 Query 826 CGATGAAGAGAA-CTTGTGGAGGAAACTATATTTTTGTAGATCCTCTTAACACAGAATGC 884 | |||||||||| || | || ||| ||| | ||| ||| | ||||||||| ||||| Sbjct 836 CAATGAAGAGAATCT-GCAAAGAAAATTATGTGAATGTGGATGCACTTAACACAAAATGC 894 Query 885 T-TGGAACTCATAAAAGACTATGACAACTGTGTTTC-TGGAA-T-ATATGAAA-ATCTTA 939 | | ||||||||||||| ||| | || ||| || | | || | | || || ||| || Sbjct 895 TATA-AACTCATAAAAGATTATCAAAAGTGTATT-CATA-AACTGA-AT-AAGTATCATA 949 Query 940 TCCTCGTACCAAAATGTGACCTTACATCTCCTGATTGCCATTCGTATCGGTCTATGCTAT 999 | | |||| | || || | ||||||||||||||| || ||| ||| | | || | Sbjct 950 TATTATTACCTGACTGCGATATAACATCTCCTGATTGCTTTTTATATAGGTAT-T-CTCT 1007 Query 1000 CC-GA--TTACTGGGCTAATAACGAGAGCGTACGCAGAGCACTTAAAGTTG-TGGAGGGT 1055 | || || ||||| || || ||||||| ||| |||| || |||| | |||| Sbjct 1008 CATGACCTTT-TGGGCCAACGACAAGAGCGTTCGCGGAGCTCTGCAAGTCAATA-AGGGA 1065 Query 1056 ACTACAGGTAGA-TGGGAACGATGTAA--ATGGAC-T-TTGCAAAACAATAAAGACATTA 1110 | || ||| ||| |||| | |||||| || | | || | | ||| | ||||| | Sbjct 1066 AGTATAGG-AGAATGGGTGCAATGTAACTATAAAAATATTTCGTAT-AATTACGACATCA 1123 Query 1111 AAAGCAGCATAC-CATACCATAAGAAGAACAGCATCCAAGGCTATCGATCTCTTATCTTC 1169 | |||||| | | ||||||||| |||||| || || | ||||| ||||||||||||| | Sbjct 1124 AGAGCAGCGT-CGCATACCATATGAAGAATAGTATTGATGGCTACCGATCTCTTATCTAC 1182 Query 1170 AGTGGTGATCACGACATGCTAACACCTTACGTTGGAACTCAAGACTGGATAAGATCTCTC 1229 | |||||| || || ||| | |||| | ||| |||||||| |||||||||||||||| Sbjct 1183 AATGGTGACCATGATATGATGGTGCCTTTCCTTGCAACTCAAGCCTGGATAAGATCTCTC 1242 Query 1230 AACTATTCCATTATTGACAAATGGAGGCCATGGATGATACTTGATCAAGTCGCTGGATAC 1289 || |||||||| | ||| | |||||||| ||||||||| |||||| |||||||||| Sbjct 1243 AATTATTCCATCACTGATGATTGGAGGCCTTGGATGATAAACGATCAAATCGCTGGATAT 1302 Query 1290 ACTACGA-CTTACGCTAATAAGATGACATTTGCTACT 1325 || | || |||| | ||||| ||||||||||||||| Sbjct 1303 ACAA-GAACTTATTCCAATAAAATGACATTTGCTACT 1338 > Ahg932263 jgi|Araly1|932263|scaffold_400251.1 Length=1260 Score = 477 bits (258), Expect = 9e-134 Identities = 879/1168 (75%), Gaps = 85/1168 (7%) Strand=Plus/Plus Query 162 CATGCTGATTCAAGTTCTATCATCAAATAT-CTTCCTGGTTTTGAAGGCCCTCTTCCCTT 220 |||| |||||| | |||||| |||| | | ||||| |||||||||||||||||||| || Sbjct 72 CATGTTGATTCTGGCTCTATCGTCAAGT-TCCTTCCCGGTTTTGAAGGCCCTCTTCCTTT 130 Query 221 CGAGCTCGAAACCGGGTACATTGGTGTTGGTGAGGAAGATGAAGAT-CAAAT-GTTCTAC 278 || ||||||||||||||||||||| |||||||| |||| |||| | | ||| ||||||| Sbjct 131 TGAACTCGAAACCGGGTACATTGGTATTGGTGAGAAAGAGGAAG-TGC-AATCGTTCTAC 188 Query 279 TACTTCATCAAATCTGAGAGCAATCCAAAA-ACAGACCCTCTTCTTCTCTGGCTAAGTGG 337 ||||| ||||| || |||| |||||||||| | ||||||||||||||||||| ||||||| Sbjct 189 TACTTTATCAAGTCCGAGAACAATCCAAAAGA-AGACCCTCTTCTTCTCTGGTTAAGTGG 247 Query 338 AGGACCTGGTTGCTCTTCTTTCACTGGTCTTATATAT-GAGAACGGGCCACTTGG-TTTC 395 ||||||||| || |||||| ||||||| ||| | | | ||||| || || |||| ||| Sbjct 248 AGGACCTGGATGTTCTTCTATCACTGGCCTTCT-TTTCGAGAATGGACC-TTTGGCTTT- 304 Query 396 AAGGT-TGAGGCGTACAATGGAAGTATCCCCACGTTGGTCTCTACTACATATTCATGGAC 454 || || |||| |||||||||||| |||| | |||||||||||||||||||||||||| Sbjct 305 AAAGTCCGAGGTTTACAATGGAAGTGTCCCTTCTTTGGTCTCTACTACATATTCATGGAC 364 Query 455 AAAGGTTGCGAATATAATCTAT-TTAGATCAACCTGTTGG-GACTGGCTTCTCCTACTCA 512 |||| ||||| ||||| | | || || || |||||||| | ||||||||||||| ||| Sbjct 365 AAAGACGGCGAACATAATAT-TCTTGGACCAGCCTGTTGGAG-CTGGCTTCTCCTATTCA 422 Query 513 AGAAATCCACTTGCTGATATACCAAGTGACACAGGATCAGCTAAGCGGGTCGATGAGTTT 572 |||| |||||| ||||| || | ||||||||| || |||| || |||||||| Sbjct 423 AGAACCCCACTTATTGATACGCCTACTGACACAGGCGAAGTTAAGAATATCCATGAGTTT 482 Query 573 CTTCGTAAA-TGGCTAACCAAGCATCCTGAGTATTTCT-CCAACCCTTTCTATGCCGGTG 630 || | ||| ||||||| ||||||||| ||| ||||| |||||||||| ||||| | | Sbjct 483 CTCCA-AAAGTGGCTAAGCAAGCATCCACAGT-TTTCTTCCAACCCTTTTTATGCTTGCG 540 Query 631 GAAATTCTTATTCCGGTAAGATGGTTCCGGTCATCGTTCAAGAAATCTC-AAATGGAAAT 689 || ||||||||||||||| ||| ||||| | | |||||||||||||||| ||| |||||| Sbjct 541 GAGATTCTTATTCCGGTATGATTGTTCCAGCCCTCGTTCAAGAAATCTCTAAA-GGAAAT 599 Query 690 TGTATTTACGGCAAACCTCAAATAAGGCTTCAGGGCTATGTGCTCGG-AAGTCCGGTAAC 748 | ||| | ||| ||||| |||| || ||||||||| | ||||| || ||| |||| Sbjct 600 TATATATGTTGCACACCTCCTATAAATCTACAGGGCTATATACTCGGGAAC-CCGATAAC 658 Query 749 AGACTAT-GATCTTGAT-AGAAATTCTCGTA-TTCAATTTGCTCATGGAATGGCACTTAT 805 | |||| || || | ||| | || | ||| |||| |||||||||||||||| || Sbjct 659 AT-CTATTGAA---GACCA-AAACTATCA-AGTTCCATTTTCTCATGGAATGGCACTAAT 712 Query 806 CTCTA-ATGAACTCTATGAGTCGATGAAGAGAACTTGTGGA-GGAAACTATATTTT--TG 861 || | ||||||| || ||||| || | |||| | || | ||||| | ||||| || Sbjct 713 TTC-AGATGAACTATACGAGTCAATTAGGAGAGCCTGCA-ACGGAAA-T-TATTTCAATG 768 Query 862 TAGATCCTCTTAACACAGAATGCTTGGAACTCATAAAAGACTATGACAACTGTGTTTCTG 921 | ||| | | ||||||| |||| ||| |||| | |||| || | || | || | | Sbjct 769 TGGATTCACGTAACACAAAATGTTTGAAACTTGTTGAAGAATACCATAA--GAGTACC-G 825 Query 922 G-AA--TATATGAA---AATCTTATCCTCGTACCAAAATGTGAC-CTTACATCTCCTGAT 974 || || ||||| ||| | || || |||| | || ||| | ||||||||| || Sbjct 826 ACAAACTAAATGAATTCAATAT-ATTATC--ACCAGATTGCGACACG-ACATCTCCTAAT 881 Query 975 TGCCATTCGTATCGGTCT-ATGCTA-TCCGATTACTGGG-CTAATAACGAGAGCGTACGC 1031 ||| || |||| | | || || | | | ||||| | || |||||||||| ||| Sbjct 882 TGCTTTTTATATCCATATTAT-CTCCTTAGCT-ACTGGATC-AACGACGAGAGCGTTCGC 938 Query 1032 AGA-GCACTTAAAGTTG-TGGAG-GGTACTACAGGTAGA-TGGGAACGATGTAA--AT-G 1084 | | || ||| | ||| | || || | || || ||| ||||| ||||||| || | Sbjct 939 A-ACGCTCTTCATGTTAATA-AGTGG-AGTATTGG-AGAATGGGAGCGATGTACTTATCG 994 Query 1085 --GACTT-TGCAAAACAATAAAGACATTAA-AAGCAGCATACCATACCATAAGAAGAACA 1140 ||| | | | | |||| |||||||| || || ||||||||||||||||| ||| |||| Sbjct 995 AAGACCTATCCCATACAACAAAGACATCAATAA-CAGCATACCATACCATATGAATAACA 1053 Query 1141 GCATCCAA-GGCTATCGATCTCTTATCTTCAGTGGTGATCACGACATG-CTAACACCTTA 1198 | || | ||||| |||||||| |||| |||||||||||| || || | || || Sbjct 1054 GTATT-AGTGGCTACCGATCTCTCATCTACAGTGGTGATCATGATTTGACGGTT-CCATA 1111 Query 1199 CGTTGGAACTCAAGACTGGATAAGATCTCTCAACTATTCCATTATTGACAAATGGAGGCC 1258 | | | |||||||| |||||||| |||||| || || ||||| ||| | ||||||| || Sbjct 1112 CCTCGCAACTCAAGCCTGGATAAAATCTCTAAATTACTCCATCATTCATGAATGGAGACC 1171 Query 1259 ATGGATGAT-ACTTGATCAAGTCGCTGG 1285 ||| |||| | |||||| ||||||| Sbjct 1172 TTGGGTGATTAAA-GATCAAATCGCTGG 1198 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52793079570 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5