BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G12240.1
Length=1311
Score E
Sequences producing significant alignments: (Bits) Value
Ahg928947 jgi|Araly1|928947|scaffold_301404.1 1919 0.0
Ahg478582 jgi|Araly1|478582|fgenesh2_kg.3__1283__AT3G12220.1 1068 0.0
Ahg478377 jgi|Araly1|478377|fgenesh2_kg.3__1078__AT3G10450.1 821 0.0
> Ahg928947 jgi|Araly1|928947|scaffold_301404.1
Length=1350
Score = 1919 bits (1039), Expect = 0.0
Identities = 1225/1315 (93%), Gaps = 11/1315 (1%)
Strand=Plus/Plus
Query 1 ATGGCTTCCTGGATATTCAAGTTGCTGCTGCTGCTGCAATGTGTGCTTGTGTTGATTCAA 60
||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||
Sbjct 21 ATGGCTTCCTGGATATTCAAG-T--TGCTGCTGCTGCAATTTGTGCTTGTGTTGATTCAA 77
Query 61 CATGCTGATTCAAGTTCTATCATCAGATATCTTCCTGGTTTTGAAGGCCCTCTTCCATTC 120
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 78 CATGCTGATTCAGGTTCTATCATCAGATATCTTCCTGGTTTTGAAGGCCCTCTTCCCTTC 137
Query 121 GAGCTCGAAACCGGGTATATTGGTGTTGGTCAAAAAGAGGAAGATCAACTGTTCTACTAC 180
||||| ||||||||||| |||||||||||| | |||| ||||||||| |||| ||||||
Sbjct 138 GAGCTTGAAACCGGGTACATTGGTGTTGGTGAGGAAGATGAAGATCAAATGTTTTACTAC 197
Query 181 TTCATCAAATCTGAGAACAATCCAGAAGAAGACCCTCTTCTTGTCTGGTTAACTGGAGGA 240
|||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 198 TTCATCAAATCTGAGAGCAATCCAGATGAAGACCCTCTTCTTGTCTGGTTAACAGGAGGA 257
Query 241 CCTGGCTGCTCTTCTTTCTCTGGTCTTGTTTATGAGAATGGGCCACTTGCTTTCAAGGTT 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 258 CCTGGCTGCTCTTCTTTCTCTGGTCTTGTTTATGAGAATGGGCCTCTTGCTTTCAAGGTT 317
Query 301 GAGACTTACAATGGAAGTGTACCGACGTTGGTTTCTACCACATATTCATGGACTAAGGTG 360
|||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||
Sbjct 318 GAGACTTACAATGGAAGTATACCAACGTTGGTTTCTACTACATATTCATGGACTAAGGTG 377
Query 361 GCGAACATAATATATTTGGATCAGCCTGTTGGGACTGGCTTCTCCTACTCAAGAAATCCA 420
|| ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||
Sbjct 378 GCCAACATAATATATTTGGACCAGCCTGTTGGGACTGGCTTCTCCTACGCAAAAAATCCA 437
Query 421 TTTGCTGATATACCAAGTGACACAGGATCAGTTAAGCGGGTCAACGAGTTTGTTCGTAAG 480
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 438 CTTGCTGATATACCAAGTGACACAGGATCAGCTAAGCGGGTCAACGAGTTTGTTCGTAAG 497
Query 481 TGGCTAGCTAAGCATCCTGAGTATTTCTCCAATCCTTTCTATGTCACTGGAAATTCTTAT 540
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 498 TGGCTTGCTAAGCATCCTGATTATTTCTCCAATCCTTTCTATGTCACCGGAAATTCTTAT 557
Query 541 TCCGGTAAGGTGATTCCGGCCATCGTTCAAGAAATCTCAAATGGAAACTATATATGCTGC 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 558 TCCGGTAAGGTGATTCCGGCCATCGTTCAAGAAATCTCAAATGGAAATTATATATGCTGC 617
Query 601 AAACCTCAAATAAATCTTCAGGGCTATGTGATCGGAAACCCGGTAGCATACT-ATGATCA 659
|||||||||||||||||||||||||||||||| |||||||||||| || ||| | | |||
Sbjct 618 AAACCTCAAATAAATCTTCAGGGCTATGTGATTGGAAACCCGGTAACAGACTCA-GCTCA 676
Query 660 TGATAAAGACTTTCGCATTCCATTTGCTCATGGAGTAGCACTCATCTCTGATGAACTCTT 719
||||||||||| |||||||||||||||||||||| | ||| | |||||||||||||| ||
Sbjct 677 TGATAAAGACTCTCGCATTCCATTTGCTCATGGAATGGCATTGATCTCTGATGAACTATT 736
Query 720 TGAGTCGTTGAAG-GCAAGTTGTGGAGGAAGCTACAGTGTTGTAGATCCTCTTAACACAG 778
||||||| ||||| | ||| ||| ||||||||| ||| |||||||||||||||| ||||
Sbjct 737 TGAGTCGATGAAGAG-AAGCTGTAAAGGAAGCTATAGTATTGTAGATCCTCTTAATACAG 795
Query 779 AATGCTTGAAACTCATCGAAGATTATGACAAGTGTGTTTCTGGAATATATGAAGAACTTA 838
|||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 796 AATGCTTGAAACTCGTTGAAGATTATCACAAGTGTGTTTCTGGAATATATGAAGAACTTA 855
Query 839 TTCTAAAATCAAAATGCGAGCAC-ACATCTCCTGATTGTTATACGTATCGGTATTTGCTA 897
|||| ||| || |||| ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 856 TTCTTAAACCACAATGTGAG-ACTACATCTCCTGATTGTTATACGTATCGGTATTTGCTA 914
Query 898 TCTGAATATTGGGCTGATAACGAGA-CTGTCCGCAGAGCACTCAAAGTTGTGAAGGGGAG 956
||||||||||||||| ||||||||| | |||||||||||||||||| |||| |||||||
Sbjct 915 TCTGAATATTGGGCTAATAACGAGAGC-GTCCGCAGAGCACTCAAAATTGTCAAGGGGAC 973
Query 957 TAAAGGGACATGGGAACGATGCGATTATAGAGTGCTTAGCAACCAAGACATCAAAAGCAG 1016
|||||||| |||||||||||| |||| || |||||| |||| ||||||| ||||||||
Sbjct 974 TAAAGGGAAATGGGAACGATGTGATTGGAGTGTGCTTTGCAATAAAGACATTAAAAGCAG 1033
Query 1017 CATACCATTCCATATCAATAACAGCATCAGAGGATATCGATCTCTAGTCATTAGCGGTGA 1076
|||||| | |||||| |||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 1034 CATACCGTACCATATGTATAACAGCATCAAAGGCTATCGATCTCTAGTCATTAGCGGTGA 1093
Query 1077 TCACGATATGACAATCCCTTTCCTTGGAACTCAAGCATGGATAAGATCTCTCAACTATTC 1136
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1094 TCACGATTTGACAATCCCTTTCGTTGGAACTCAAGCATGGATAAGATCTCTCAACTATTC 1153
Query 1137 CATTACTGAAAAATGGAGACCTTGGATGATACTCGACCAAGTCGCCGGATACACCAAGAC 1196
|||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||
Sbjct 1154 CATTACTGAAAAATGGAGGCCATGGATGATACTCGATCAAGTCGCCGGATACACCAAGAC 1213
Query 1197 TTATGCCAATAAGATGACACTTGCCACTGTGAAAGGAGGTGGGCACACATTGGAATATAA 1256
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1214 TTATGCCAATAAGATGACATTTGCCACTGTGAAAGGAGGTGGGCACACATTGGAATATAA 1273
Query 1257 ACCAGAGGAGAACTCAGTCTTGTTCAAGAGGTGGATAAGTGGTCAACCTCTTTAA 1311
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1274 ACCAGAGGAGAATTCAATCTTGTTCAAGAGGTGGATAAGTGGTCAACCTCTTTAA 1328
> Ahg478582 jgi|Araly1|478582|fgenesh2_kg.3__1283__AT3G12220.1
Length=1399
Score = 1068 bits (578), Expect = 0.0
Identities = 1082/1312 (82%), Gaps = 87/1312 (7%)
Strand=Plus/Plus
Query 1 ATGGCTTCCTGGATATTCAAGTTGCTGCTGCTGCTGCAA-TGTGTGCTTGTGTTGATTCA 59
|||| ||| |||||| |||||| | |||||||||||| | ||||||| |||||| | |
Sbjct 71 ATGGGTTCATGGATACCCAAGTT--T-CTGCTGCTGCAACT-TGTGCTTCTGTTGACT-A 125
Query 60 A-CATGCTGATTCAAGTTCTATCATCAGATATCTTCCTGGTTTTGAAGGCCCTCTTCCAT 118
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 126 AGCATGCTGATTCAAGTTCTATCATCAGATATCTTCCTGGTTTTGAAGGCCCTCTTCCCT 185
Query 119 TCGAGCTCGAAACCGGGTATATTGGTGTTGGTCAAAAAGAGGAAGATCAACTGTTCTACT 178
||||||||||||||||||| |||||||||||| | |||||||||||||| |||||||||
Sbjct 186 TCGAGCTCGAAACCGGGTACATTGGTGTTGGTGATGAAGAGGAAGATCAAATGTTCTACT 245
Query 179 ACTTCATCAAATCTGAGAACAATCCAGAAGAAGACCCTCTTCTTGTCTGGTTAACTGGAG 238
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 246 ACTTCATCAAATCTGAGAGCAATCCAGAAGAAGACCCTCTTCTTGTCTGGTTAACTGCAG 305
Query 239 GACCTGGCTGCTCTTCTTTCTCTGGTCTTGTTTATGAGAATGGGCCACTTGCTTTCAAGG 298
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 306 GACCTGGCTGCTCTTCTTTCTCTGGTCTTGTTTATGAGAATGGGCCTCTTGCTTTCAAGG 365
Query 299 TTGAGACTTACAATGGAAGTGTACCGACGTTGGTTTCTACCACATATTCATGGACTAAGG 358
|| || ||||||||||||| | || |||||||||||||| |||||||||||||||||||
Sbjct 366 TTAAGGGTTACAATGGAAGTATTCCCACGTTGGTTTCTACTACATATTCATGGACTAAGG 425
Query 359 TGGCGAACATAATATATTTGGATCAGCCTGTTGGGACTGGCTTCTCCTACTCAAGAAATC 418
| |||| | | ||||||||| | | | || ||| | | | | ||||||
Sbjct 426 T----AACACCAGCT-TTTGGATCA---T-T-G---CTT-CTT-T--T--T-A-GAAATC 464
Query 419 CATTTGCTGATATACCAAGTGACACAGGATCAGTTAAGCGGGTCAACGAGTTTGTTCGTA 478
|| ||||||||||| ||||||||||||||||| |||||||||| |||||||| ||| ||
Sbjct 465 CACTTGCTGATATATCAAGTGACACAGGATCAACTAAGCGGGTCGACGAGTTTCTTCCTA 524
Query 479 AGTGGCTAGCTAAGCATCCTGAGTATTTCTCCAATCCTTTCTATGTCACTGGAAATTCTT 538
|| ||| | ||||| ||||||||||||||||||||||| ||||| || |||||||
Sbjct 525 AG---CTA---A-GCATC--GAGTATTTCTCCAATCCTTTCTACGTCACCGGCAATTCTT 575
Query 539 ATTCCGGTAAGGTGATTCCGGCCATCGTTCAAGAAATCTCAAATGGAAACTATATATGCT 598
| ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 576 ACTCCGGTAAGTTGATTCCGGTTATCGTTCAAGAAATCTCAAATGGAAACTGTATATGCT 635
Query 599 GCAAACCTCAAATAAATCTTCAGGGCTATGTGATCGGAAACCCGGT-AGCATACTATGAT 657
|||||||||||||||||||||||||||||||| |||||| |||||| | || | | |||
Sbjct 636 GCAAACCTCAAATAAATCTTCAGGGCTATGTGCTCGGAAGCCCGGTTA-CAGATTCTGAA 694
Query 658 CATGATAAAGACTTTCGCATTCCATTTGCTCATGGAGTAG-CACTCATCTCTGATGAACT 716
| | ||||| ||| |||||||| || ||||||| || | | ||||||| |||||||||||
Sbjct 695 CTTAATAAAAACTCTCGCATTCAATATGCTCATAGAAT-GTCACTCATATCTGATGAACT 753
Query 717 CTTTGAGTCGTTGAAG-GCAAGTTGTGGAGGAAGCTACAGTGTTGTAGATCCTCTTAACA 775
|| |||||| ||||| | ||| |||||||||| ||| | | ||||||||||||| ||||
Sbjct 754 CTACGAGTCGATGAAGAG-AAGCTGTGGAGGAAACTATATTATTGTAGATCCTCTAAACA 812
Query 776 CAGAATGCTTGAAACTCATCGAAGATTATGACAAGTGTGTTTCTGGAATATATGAAGAAC 835
|| |||||||| ||||||| |||| |||||||||||||||||||||||||||||| |||
Sbjct 813 CACAATGCTTGGAACTCATTAAAGACTATGACAAGTGTGTTTCTGGAATATATGAA-AAC 871
Query 836 -TTATTCTAAAATCAAAATGCGAGCACACATCTCCTGATTGTTATACGTATCGGTAT-TT 893
|||| || | ||||||| || | |||||||||||||| | | | | | || ||
Sbjct 872 CTTATCCTCGCACCAAAATGTGACCTTACATCTCCTGATTGCCA-AT-T-T-GCCATGTT 927
Query 894 GCTAT--CTGAA-TATTGGGCTGATAACGAGACTGTCCGCAGA--GCACTCAA-AGTTGT 947
||||| | | ||| || || || | || |||| | | | | ||| | |
Sbjct 928 GCTATGGCAGTCGTATCGGTCT-AT---G---CTATCCGAATACTGGGC-CAATAAC-GA 978
Query 948 GAAGGGG-AGTAAAGGGACATGGG-AACGATGCGATTATAGAGT--GCTTAGCAACCAAG 1003
|| | || | || ||| | ||||| ||||||| | || |||| || ||||| |||
Sbjct 979 GA-GCGGTACTACAGGTA-ATGGGGAACGATGTAA--ATGGAGTTTGCAAAGCAATAAAG 1034
Query 1004 ACATCAAAAGCAGCATACCATTCCATATCAATAACAGCATCAGA-GGATATCGATCTCT- 1061
|||| |||||||||||||||| ||||| || ||||||||| || || |||||||||||
Sbjct 1035 ACATTAAAAGCAGCATACCATACCATAAAAAGAACAGCATC-GAAGGCTATCGATCTCTC 1093
Query 1062 AGTCATT-AGCGGTGATCACGATATGAC-AATC-CCTTTCCTTGGAACTCAAG-CATGGA 1117
| || || || ||||||||||| ||| | || | |||| | |||||||||||| | ||||
Sbjct 1094 A-TC-TTCAGTGGTGATCACGACATG-CTAA-CACCTTACATTGGAACTCAAGAC-TGGA 1148
Query 1118 TAAGATCTCTCAACTATTCCATTACTGAAAAATGGAGACCTTGGATGATACTCGACCAAG 1177
| |||||||| ||||||||||||| ||| |||||||| || ||||||||||| || ||||
Sbjct 1149 TCAGATCTCTTAACTATTCCATTATTGACAAATGGAGGCCATGGATGATACTTGATCAAG 1208
Query 1178 TCGCCGGATACACCAAGACTTATGCCAATAAGATGACACTTGCCACTGTGAAAGGAGGTG 1237
|||| |||||||| | ||||||||| || | ||||||| |||| || ||||||||||| |
Sbjct 1209 TCGCTGGATACACTACGACTTATGCTAACAGGATGACATTTGCAACAGTGAAAGGAGGAG 1268
Query 1238 GGCACACATTGGAATATAAACC-AGAGGAGAACTCAGTCTTGTTCAAGAGGT 1288
||||||| || || |||||||| | ||||||| ||| |||||||| ||||||
Sbjct 1269 GGCACACGTTAGACTATAAACCCA-AGGAGAATTCAATCTTGTTCCAGAGGT 1319
> Ahg478377 jgi|Araly1|478377|fgenesh2_kg.3__1078__AT3G10450.1
Length=1332
Score = 821 bits (444), Expect = 0.0
Identities = 995/1257 (79%), Gaps = 54/1257 (4%)
Strand=Plus/Plus
Query 76 TCTATCATC-AGATATCTTCCTGGTTTTGAAGGCCCTCTTCCATTCGAGCTCGAAACCGG 134
|||||| || || | ||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct 85 TCTATCGTCAAG-TCTCTTCCTGGTTTTGATGGCCCTCTTCCCTTTGAGCTCGAAACCGG 143
Query 135 GTATATTGGTGTTGGTCAAA-AAGAGGAAGAT-CAACTGTTCTACTACTTCATCAAATCT 192
|||||||||||||||| || ||||||||| | || |||| |||||||| ||||| |||
Sbjct 144 GTATATTGGTGTTGGT-AAGGAAGAGGAAG-TGCAGTTGTTTTACTACTTTATCAAGTCT 201
Query 193 GAGAACAATCCAGAAGAAGACCCTCTTCTTGTCTGGTTAACTGGAGGACCTGGCTGCTCT 252
|||| | |||| ||||||| ||||||||| ||||||||| |||||||||||| ||||||
Sbjct 202 GAGAGGAGTCCACAAGAAGATCCTCTTCTTCTCTGGTTAAGTGGAGGACCTGGTTGCTCT 261
Query 253 TCTTTCTCTGGTCTTGTTTATGAGAATGGGCCACTTG-CTTTCAAGGTTGAGACTTACAA 311
||| ||||||||||| |||| ||||||||||| | | || | ||| ||||| ||||||
Sbjct 262 TCTATCTCTGGTCTTCTTTACGAGAATGGGCCTGT-GACTGTGAAGCTTGAGGTTTACAA 320
Query 312 TGGAAGTGTACCGACGTTGGTTTCTACCACATATTCATGGACTAAGGTGGCGAACATAAT 371
||||| | | || | ||||| ||||| |||||||| ||||||||||| ||| |||||
Sbjct 321 TGGAACTCTTCCTTCCTTGGTCTCTACTACATATTCGTGGACTAAGGTTTCGAGTATAAT 380
Query 372 ATATTTGGATCAGCCTGTTGGGACTGGCTTCTCCTACTCAAGAAATCCATTTGCTGATAT 431
||||||||||||||||||||| ||||||||||| |||||||||| || | ||||| |||
Sbjct 381 ATATTTGGATCAGCCTGTTGGAACTGGCTTCTCTTACTCAAGAACTCAACTTGCTAATAA 440
Query 432 ACCAAGTGACACAGGATCAGTTAAGCGGGTCAACGAGTTTGTTCGTAAGTGGCTAG-CTA 490
||||||||| ||||| || ||| || || | |||||| ||| |||||||||| | |
Sbjct 441 ACCAAGTGATTCAGGAGAAGCCAAGAGGATCCATGAGTTTCTTCACAAGTGGCTAGGC-A 499
Query 491 AGCATCCTGAGTATTTC-TCCAATCCTTTCTATGTCACTGGAAATTCTTATTCCGGTAAG 549
|||||| |||| |||| ||||| |||||||||||| ||| ||||||||| ||||| |
Sbjct 500 AGCATCAAGAGT-TTTCCTCCAACCCTTTCTATGTCGGTGGGGATTCTTATTGCGGTATG 558
Query 550 GTGATTCCGGC-CATCGTTCAAGAAATCTCAAATGGAAACTATATATGCTGCAAACCTCA 608
|| |||||||| | ||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 559 GTCATTCCGGCAC-TCGTTCAAGAAATCTCAAAAGGAAACTATGTATGCTGCAAACCTCC 617
Query 609 AATAAATCTTCAGGGCTATGTGATCGGAAACCCGGT-AGCATACTATGATCATGATAA-A 666
||||||||||||||||||| | |||||||||| | | || | |||| ||||| |
Sbjct 618 AATAAATCTTCAGGGCTATATCCTCGGAAACCCA-TCAACAGAAAATGAAGTTGATATTA 676
Query 667 GACTT-TCGCATTCCATTTGCTCATGGAGTAGCACTCATCTCTGATGAACTCTTTGAGTC 725
| || ||||||||||| |||||||||| | ||||| |||||||||||||||| |||||
Sbjct 677 G--TTATCGCATTCCATATGCTCATGGAATGGCACTGATCTCTGATGAACTCTACGAGTC 734
Query 726 GTTGAAG-GCAAGT-TGTGGAGGAAGCTAC-AGTGTTGTAGATCCTCTTAACACAGAATG 782
||||| | || | || ||||| || | | || ||||| | ||||||| ||||
Sbjct 735 ACTGAAGAG-AA-TCTGCAAAGGAAAATATGAAAAT-GTTGATCCACGTAACACAAAATG 791
Query 783 CTTGAAACTCATCGAAGATTATGACAAGTGTGTTTCTGGAATATATGAAGAACTTATTCT 842
|||||||||| | | ||| ||| | ||||| || | ||||| | ||| |||||| |
Sbjct 792 CTTGAAACTCGTTGGAGAATATCAGAAGTGCATTAATAGAATAAACAAAGCACTTATAAT 851
Query 843 AAAATCAAAATGCG-AGCACACATCTCCTGATTGTTATACGTATCGGTATTTGCTATCTG 901
|| || | || | || | |||||||||||||| |||| ||||||||||||| || ||
Sbjct 852 AACGCCAGAGTGTGTAGAA-ACATCTCCTGATTGCTATATGTATCGGTATTTGTTAACT- 909
Query 902 AA-TATTGGGCTGATAACGAGACTGTCCGCAGAGCACT-CAAAGTTG-TGAAGGGGAGTA 958
| || ||||| || | |||| ||| | ||||| || || || | ||||||||||
Sbjct 910 ACCTACTGGGCCAATGATGAGAGTGTGCAAAGAGCTCTTCAT-GTCAAT-AAGGGGAGTA 967
Query 959 AAGGG-ACATGGGAACGATGCGATTAT-AGAGTGC-TTAGCAACCAAGACATCAAAAGCA 1015
|||| | ||||| ||| || || ||| | | ||| ||| || ||||| |||||||
Sbjct 968 TAGGGGA-ATGGGTACGTTGTTATCGGGAGA-TACCTTA-CAATCATGACATTAAAAGCA 1024
Query 1016 GCATACCATTCCATATCAATAACAGCATCAGA-GGATATCGATCTCT-AGTCATT-AGCG 1072
| |||| | |||||| |||||||||||| || || |||| ||||| | || || || |
Sbjct 1025 GTGTACCGTACCATATGAATAACAGCATC-GATGGCTATCCTTCTCTCA-TC-TTCAGTG 1081
Query 1073 GTGATCACGATATGACAA-TCCCTTTCCTTGGAACTCAAGCATGGATAAGATCTCTCAAC 1131
| |||||||| ||| || | |||| ||||||||||||||| ||||| || ||||| ||
Sbjct 1082 GGGATCACGACATGG-AAGTACCTTACCTTGGAACTCAAGCTTGGATTAGGTCTCTTAAT 1140
Query 1132 TATTC-CATTACTGAAAAATGGAGACCTTGGATGATACTCGACCAAGTCGCCGGATACAC 1190
||||| | | | ||| | |||||||||||||||||| ||| ||| |||| ||||||||
Sbjct 1141 TATTCTC-TCATTGATGACTGGAGACCTTGGATGATAGGCGATCAAATCGCTGGATACAC 1199
Query 1191 CAAGACTTATGCCAATAAGATGACACTTGCCACTGTGAAAGGAGGTGGGCACACATTGGA 1250
| |||||||||||||||||||||| |||| || | ||||||||||| |||||| ||
Sbjct 1200 GAGGACTTATGCCAATAAGATGACATTTGCTACCATCAAAGGAGGTGGACACACACCAGA 1259
Query 1251 ATATAAACCAGAGGAGAACTCAG-TCTTGTTC-AAGAGGTGGATAAGTGGTCAACCT 1305
|||||||||||||||| || | || ||||| || |||||||| |||||||| |||
Sbjct 1260 GTATAAACCAGAGGAGA-CTTATATCATGTTCCAA-AGGTGGATCAGTGGTCAGCCT 1314
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49026071262
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5