BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G12520.1
Length=2230
Score E
Sequences producing significant alignments: (Bits) Value
Ahg928972 jgi|Araly1|928972|scaffold_301429.1 3350 0.0
Ahg940820 jgi|Araly1|940820|scaffold_601364.1 1857 0.0
> Ahg928972 jgi|Araly1|928972|scaffold_301429.1
Length=2078
Score = 3350 bits (1814), Expect = 0.0
Identities = 1993/2081 (96%), Gaps = 6/2081 (0%)
Strand=Plus/Plus
Query 13 TTCTTCTCTATCCCACCAATTCCGATGTCCCTCGCCGTCAAGGATCTCTCCACCGCTTCA 72
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1 TTCTTCTCTATCCCACCAATTCCGATGTCTCTCGCCGTCAAGGATCTCTCCACCGCTTCG 60
Query 73 TCCTCTTCATCTAAGGCGATTCCGGTCAAGATCATTCCTCTCCAGTATCCCGATTCCACC 132
||||||||||| | |||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 61 TCCTCTTCATCCACGGCGATTCCGGTGAAGATCATTCCTCTCCAGCATCCCGATTCCACC 120
Query 133 TCTTCTGATCCTCACTGTCACTCCATTCCCTTTAATGATTTCTTCTCCCGATGGACGGCG 192
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 121 TCTTCTGATCCTCACTGTCACTCCATTCCCTTCAATGATTTCTTCTCCCGATGGACGGTG 180
Query 193 AAGATCAAGCGCATGACGTTCTTCGACTGGATTGATGCAATATTTCCTTGCTTCCTTTGG 252
||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 181 AAGATCAAGCGTATGACGTTCTTCGACTGGATTGATACCATATTTCCTTGCTTCCTTTGG 240
Query 253 ATTCGGACTTACCGGTGGCATCAGTACTTTAAGCTCGATCTTATGGCTGGTATCACCGTC 312
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 241 ATTCGGACTTACCGGTGGCATCAATACTTTAAGCTCGATCTTATGGCTGGTATCACCGTC 300
Query 313 GGTATCATGCTTGTTCCCCAGGCAATGTCGTATGCAAGGTTAGCTGGGCTTCAACCAATA 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GGTATCATGCTTGTTCCCCAGGCAATGTCGTATGCAAGGTTAGCTGGGCTTCAACCAATA 360
Query 373 TACGGTCTATACTCCTCATTTGTGCCGGTATTCGTGTATGCCGTCTTCGGTTCATCCCGT 432
|||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||
Sbjct 361 TACGGTCTATACTCATCATTTGTGCCTGTATTTGTGTATGCCGTTTTCGGTTCATCCCGT 420
Query 433 CAGCTTGCAGTTGGACCTGTAGCATTAGTTTCCCTTCTCGTTTCTAATGCCTTGAGTGGA 492
||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||
Sbjct 421 CAGCTTGCAGTTGGACCTGTAGCATTAGTTTCCCTTCTCGTCTCGAATGCCTTGGGTGGA 480
Query 493 ATTGTTGATCCATCTGAAGAATTATACACTGAGCTTGCCATTTTGTTGGCTCTTATGGTC 552
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 481 ATTGTTGATCCATCTGAAGAGCTATACACTGAGCTTGCCATTTTGTTGGCTCTTCTGGTT 540
Query 553 GGAATATTTGAGAGCATTATGGGGTTCTTGAGGCTTGGATGGCTTATTCGTTTCATAAGT 612
|| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GGGATATTTGAGTGCATCATGGGGTTCTTGAGGCTTGGATGGCTTATTCGTTTCATAAGT 600
Query 613 CACTCAGTCATTTCTGGATTTACAACTGCTTCAGCTGTTGTAATTGGGTTATCCCAACTG 672
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 601 CACTCAGTCATTTCTGGATTTACAACTGCTTCAGCTGTTGTGATTGGGTTATCCCAATTG 660
Query 673 AAATACTTCCTAGGGTATAGCGTTTCTCGGAGCAGCAAGATTATGCCAGTAATTGATAGC 732
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 661 AAATACTTCCTAGGGTATAGCGTTTCTCGGAGCAGCAAGATTATGCCCGTAATTGAGAGC 720
Query 733 ATAATAGCTGGAGCTGATCAGTTTAAGTGGCCACCTTTCTTGTTGGGATGTACCATTCTG 792
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 721 ATAATAGCTGGAGCTGATCAGTTTAAATGGCCACCTTTCTTGTTGGGATCTACCATTCTG 780
Query 793 GTGATCCTTTTAGTAATGAAGCATGTGGGAAAAGCAAAGAAGGAACTTCGGTTCATACGA 852
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 781 GTGATCCTTTTAGTAATGAAGCATGTGGGAAAAGCAAAGAAGGAACTTCAGTTCGTACGA 840
Query 853 GCAGCAGGACCGCTCACAGGTCTTGCTCTTGGTACAATCATTGCAAAAGTGTTCCATCCA 912
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 841 GCAGCAGGACCGCTCACAGGGCTTGCTCTTGGTACAATGATTGCAAAAGTGTTCCATCCA 900
Query 913 CCTTCCATCACACTGGTGGGAGATATACCTCAGGGACTTCCAAAGTTTTCTTTCCCAAAA 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 CCTTCCATCACACTGGTGGGAGATATACCTCAGGGACTTCCAAAGTTTTCTTTCCCAAAA 960
Query 973 AGTTTTGATCATGCCAAATTACTGCTTCCAACATCGGCTCTCATTACTGGTGTTGCCATC 1032
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AGTTTTGATCATGCTAAATCACTGCTTCCAACATCGGCTCTCATTACTGGTGTTGCCATC 1020
Query 1033 TTGGAATCTGTAGGTATTGCGAAAGCACTAGCCGCGAAAAATAGATACGAATTGGATTCA 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 TTGGAATCTGTAGGTATTGCGAAAGCACTAGCCGCGAAAAATAGATACGAATTGGATTCA 1080
Query 1093 AATTCAGAGTTGTTTGGTCTTGGCGTTGCAAATATATTTGGGTCACTATTCTCTGCATAT 1152
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1081 AATTCAGAGTTGTTTGGTCTTGGTGTTGCAAATATATTTGGGTCACTATTCTCTGCATAT 1140
Query 1153 CCAACTACAGGATCCTTTTCTAGGTCAGCTGTGAATAGCGAAAGTGAAGCCAAGACTGGT 1212
||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct 1141 CCAACTACAGGATCCTTTTCTAGGTCAGCGGTGAAAAGTGAAAGTGAAGCCAAGACTGGC 1200
Query 1213 CTATCAGGCCTTGTAACAGGAATCATCATTGGATGTTCTCTACTGTTCTTGACCCCAATG 1272
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1201 CTATCAGGCCTTGTAACAGGAATTATCATTGGATGTTCTCTACTGTTCTTGACCCCAATG 1260
Query 1273 TTCAAATTTATACCACAGTGTGCTTTAGCAGCAATAGTTATCTCTGCTGTTAGTGGTTTG 1332
|| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1261 TTTAAATTTATACCACAGTGTGCTTTAGCAGCAATAGTGATCTCTGCTGTTAGTGGCTTG 1320
Query 1333 GTGGACTATGAAGGGGCAATCTTTCTGTGGCGTGTGGACAAGAGAGATTTTACTCTTTGG 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 GTGGACTATGAAGGGGCAATCTTTCTGTGGCGTGTGGACAAGAGAGATTTTACTCTTTGG 1380
Query 1393 ACCATCACTAGCACCACCACTTTGTTCTTTGGAATAGAGATTGGGGTCCTCATTGGTGTT 1452
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 ACCATCACTAGCACTACCACTTTGTTCTTTGGAATAGAGATTGGGGTCCTCATTGGTGTT 1440
Query 1453 GGTTTTTCACTTGCATTTGTTATACACGAGTCTGCAAACCCTCATATAGCTGTCTTGGGG 1512
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1441 GGTTTTTCACTTGCATTTGTAATACACGAGTCTGCAAACCCTCATATAGCTGTCTTGGGG 1500
Query 1513 CGTCTTCCAGGGACCACTGTGTACAGAAACATGAAACAGTATCCAGAGGCATACACTTAC 1572
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1501 CGTCTTCCAGGGACCACTGTGTACAGAAACATGAAGCAGTATCCAGAGGCATACACTTAC 1560
Query 1573 AACGGGATTGTGATTGTTCGAATCGATGCTCCCATTTATTTTGCCAACATAAGCTACATC 1632
| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1561 AGCGGAATTGTGATTGTTCGAATTGATGCTCCCATTTATTTTGCCAACATAAGCTACATC 1620
Query 1633 AAGGACAGGCTACGAGAATATGAAGTTGCTATCGACAAACACACAAGCAAGGGCCCAGAT 1692
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1621 AAGGACAGGCTACGAGAATATGAAGTAGCTATCGACAAACACACAAGCAAGGGACCAGAT 1680
Query 1693 ATGGAGAGGATCTACTTTGTTATCCTGGAAATGTCTCCTGTCACATACATCGACTCGAGC 1752
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1681 ATGGAGAGGATCTACTTCGTTATCCTGGAAATGTCTCCTGTCACATACATCGACTCAAGC 1740
Query 1753 GCTGTAGAAGCTTTAAAAGATTTGTACGAGGAGTATAAAACAAGGGGCATTCAGCTAGCG 1812
|| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1741 GCAGTAGAAGCCTTAAAAGATTTGTACGAGGAGTATAAAACAAGGGGGATTCAGCTAGCG 1800
Query 1813 ATTTCGAACCCAAACAAAGAGGTTCTCTTGACTCTAGCAAGAGCAGGCATTGTGGAACTT 1872
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1801 ATCTCGAACCCAAACAAAGAGGTTCTCTTAACTCTAGCAAGAGCAGGCATTGTGGAACTT 1860
Query 1873 ATTGGCAAAGAATGGTTCTTCGTGAGAGTACATGACGCAGTCCAAGTTTGTGTTCATTAC 1932
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1861 ATTGGCAAAGAATGGTTCTTCGTGAGAGTACACGATGCAGTCCAAGTTTGTGTTCATTAC 1920
Query 1933 GTCAATAGACCCACAGATGTAGAAGAAAGCAGCAAACCAAGCTTATGGAGAAGAAGCGGC 1992
||||||| ||| |||||||| |||||||| |||||| ||||||||||||||||||| |||
Sbjct 1921 GTCAATACACCTACAGATGTTGAAGAAAGTAGCAAATCAAGCTTATGGAGAAGAAGTGGC 1980
Query 1993 -CTGAAAAACTCATCGACC-TACACTGAAGTTGAATC-GAACATAGTTTTAGAGGAACCA 2049
| |||||||||| | | | ||| ||||||||||| | || |||||||||| | ||||||
Sbjct 1981 GC-GAAAAACTCACC-ATCATACGCTGAAGTTGAACCCGA-CATAGTTTTAAAAGAACCA 2037
Query 2050 TTGTTGTCAAGAGAGAAATAGAGACATTGAACACTTCGATT 2090
|||||||| || |||||||| ||| ||| |||||| |||||
Sbjct 2038 TTGTTGTCCAGGGAGAAATAAAGAAATTAAACACTCCGATT 2078
> Ahg940820 jgi|Araly1|940820|scaffold_601364.1
Length=2103
Score = 1857 bits (1005), Expect = 0.0
Identities = 1530/1787 (86%), Gaps = 21/1787 (1%)
Strand=Plus/Plus
Query 159 TCCCTTT-AATGATTTCTTCTCCCGATGGACGGCGAAGATCAAGCGCATGACGTTCTTCG 217
||||||| | ||| |||||||| ||||||||||||||||||||||||||| | || |||
Sbjct 185 TCCCTTTCGACGATATCTTCTCCGGATGGACGGCGAAGATCAAGCGCATGAGGCTCGTCG 244
Query 218 ACTGGATTGATGCAATATTTCCTTGCTTCCTTTGGATTCGGACTTACCGGTGGCATC-AG 276
| ||| ||||| | | |||||||| |||| |||||||| |||||||| ||| | | ||
Sbjct 245 ATTGGGTTGATACTCTTTTTCCTTGTTTCCGATGGATTCGAACTTACCGATGG-AGCGAG 303
Query 277 TACTTTAAGCTCGATCTTATGGCTGGTATCACCGTCGGTATCATGCTTGTTCCCCAGGCA 336
|| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 304 TATTTTAAGCTCGATCTCATGGCTGGTATCACCGTCGGTATAATGCTTGTTCCCCAGGCA 363
Query 337 ATGTCGTATGCAAGGTTAGCTGGGCTTCAACCAATATACGGTCTATACTCCTCATTTGTG 396
||||||||||||| ||||||| |||| |||||| |||||||||||||| |||||||||
Sbjct 364 ATGTCGTATGCAAAACTAGCTGGCCTTCCACCAATTTACGGTCTATACTCTTCATTTGTG 423
Query 397 CCGGTATTCGTGTATGCCGTCTTCGGTTCATCCCGTCAGCTTGCAGTTGGACCTGTAGCA 456
|| | || ||||||||| | ||||| |||||||| || |||||| ||||||| ||||||
Sbjct 424 CCCATCTTTGTGTATGCCATATTCGGCTCATCCCGGCAACTTGCAATTGGACCCGTAGCA 483
Query 457 TTAGTTTCCCTTCTCGTTTCTAATGCCTTGAGTGGAATTGTTGAT-CCATCTGAAGAATT 515
|| || || |||||||| |||||||| ||| | ||||| | |||| | | | | |||||
Sbjct 484 TTGGTGTCTCTTCTCGTCTCTAATGCTTTGGGCGGAATCGCTGATACGAAC-CAGGAATT 542
Query 516 ATACACTGAGCTTGCCATTTTGTTGGCTCTTATGGTCGGAATATTTGAGAGCATTATGGG 575
| | | ||| || |||||||||||||| ||| |||| ||||| || ||| |||| |||||
Sbjct 543 ACATATTGAACTGGCCATTTTGTTGGCGCTTTTGGTTGGAATCTTGGAGTGCATCATGGG 602
Query 576 GTTCTTGAGGCTTGGATGGCTTATTCGTTTCATAAGTCACTCAGTCATTTCTGGATTTAC 635
| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 603 GCTCTTGAGGCTTGGATGGCTTATTCGTTTCATAAGTCACTCGGTCATATCTGGATTTAC 662
Query 636 AACTGCTTCAGCTGTTGTAATTGGGTTATCCCAACTGAAATACTTCCTAGGGTATAGCGT 695
|| |||||| || |||||||||||||||| ||| | ||||| ||||| ||||||||| |
Sbjct 663 AAGTGCTTCGGCCATTGTAATTGGGTTATCTCAAGTAAAATATTTCCTGGGGTATAGCAT 722
Query 696 TTCTCGGAGCAGCAAGATTATGCCAGTAATTGATAGCATAATAGCTGGAGCTGATCAGTT 755
| | |||||||||||||| ||||| || | || ||||||||||| ||||||||| ||||
Sbjct 723 TGCCCGGAGCAGCAAGATCGTGCCACTAGTAGAGAGCATAATAGCAGGAGCTGATAAGTT 782
Query 756 TAAGTGGCCACCTTTCTTGTTGGGATGTAC-CATTCTGGTGATCCTTTTAGTAATGAAGC 814
| ||||||||||||||||| |||||| | | |||||||||||||||| ||| |||||||
Sbjct 783 TCAGTGGCCACCTTTCTTGATGGGATCT-CTCATTCTGGTGATCCTTCAAGTGATGAAGC 841
Query 815 ATGTGGGAAAAGCAAAGAAGGAACTTCGGTTCATACGAGCAGCAGGACCGCTCACAGGTC 874
|||||||||||||||| |||||||||| |||| |||||||||||| ||| ||||||||
Sbjct 842 ATGTGGGAAAAGCAAAAAAGGAACTTCAGTTCTTACGAGCAGCAGCACCACTCACAGGGA 901
Query 875 TTGCT-CTTGGTACAATCATTGCAAAAGTGTTCCATCCACCTTCCATCACACTGGTGGGA 933
||| | || ||||||| |||||||||||| || ||||||||||||||| | |||||||||
Sbjct 902 TTG-TGCTCGGTACAACCATTGCAAAAGTCTTTCATCCACCTTCCATCTCTCTGGTGGGA 960
Query 934 GATATACCTCAGGG-ACTTCCAA-AGTTTTCTTTCCCAAAAAGTTTTGATCATGCCAAAT 991
|| ||||||||||| | |||||| | ||||||||||||| ||||||||||||||| |||
Sbjct 961 GAAATACCTCAGGGCA-TTCCAACA-TTTTCTTTCCCAAGAAGTTTTGATCATGCAAAAA 1018
Query 992 TACTGCTTCCAACATCGGCTCTCATTACTGGTGTTGCCATCTTGGAATCTGTAGGTATTG 1051
| ||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||
Sbjct 1019 CATTGCTTCCAACATCAGCTCTCATTACTGGTGTTGCCATTTTGGAATCTGTGGGAATTG 1078
Query 1052 CGAAAGCACTAGCCGCGAAAAATAGATACGAATTGGATTCAAATTCAGAGTTGTTTGGTC 1111
| |||||||| || |||||||| ||||| || || |||||||||||||||||||||||||
Sbjct 1079 CCAAAGCACTCGCAGCGAAAAACAGATATGAGTTAGATTCAAATTCAGAGTTGTTTGGTC 1138
Query 1112 TTGGCGTTGCAAATATATTTGGGTCACTATTCTCTGCATATCCAACTACAGGATCCTTTT 1171
|||| |||||||||||||| |||||| |||| || ||||| ||| |||||||||||||||
Sbjct 1139 TTGGTGTTGCAAATATATTGGGGTCATTATTTTCCGCATACCCAGCTACAGGATCCTTTT 1198
Query 1172 CTAGGTCAGCTGTGAATAGCGAAAGTGAAGCCAAGACTGGTCTATCAGGCCTTGTAACAG 1231
|||||||||||||||||| ||||||||||| |||||||| |||||||| ||| ||||||
Sbjct 1199 CTAGGTCAGCTGTGAATAATGAAAGTGAAGCTAAGACTGGCCTATCAGGACTTATAACAG 1258
Query 1232 GAATCATCATTGGATGTTCTCTACTGTTCTTGACCCCAATGTTCAAATTTATACCACAGT 1291
||||||||||||| ||||||||||| |||||||| |||||||| |||| ||||||||||
Sbjct 1259 GAATCATCATTGGGTGTTCTCTACTATTCTTGACACCAATGTTTAAATACATACCACAGT 1318
Query 1292 GTGCTTTAGCAGCAATAGTTATCTCTGCTGTTAGTGGTTTGGTGGACTATGAAGGGGCAA 1351
||||||| ||||||||||| || ||||| || ||||| |||||||||||||| | || |
Sbjct 1319 GTGCTTTGGCAGCAATAGTGATATCTGCCGTGAGTGGCTTGGTGGACTATGACGAAGCTA 1378
Query 1352 TCTTTC-TGTGGCGTGTGGACAAGAGAGATTTTACTCTTTGGACCATCACTAGCACCACC 1410
| |||| | ||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1379 T-TTTCCTATGGCGTGTGGACAAGAGGGATTTTACGCTTTGGACCATCACTAGCACCACG 1437
Query 1411 ACTTTGTTCTTTGGAATAGAGATTGGGGTCCTCATTGGTGTTGGTTTTTCACTTGCATTT 1470
|| |||||||| ||||||||||| || ||||| |||||||||| |||||||| ||||||
Sbjct 1438 ACATTGTTCTTCGGAATAGAGATCGGTGTCCTTGTTGGTGTTGGGTTTTCACTAGCATTT 1497
Query 1471 GTTATACACGAGTCTGCAAACCCTCATATAGCTGTCTTGGGGCGTCTTCCAGGGACCACT 1530
||||| |||||||||||||| ||||| || ||||||||||| ||||||||||| ||||||
Sbjct 1498 GTTATCCACGAGTCTGCAAATCCTCACATTGCTGTCTTGGGACGTCTTCCAGGCACCACT 1557
Query 1531 GTGTACAGAAACATGAAA-CAGTATCCAGAGGCATACACTTACAACGGGATTGTGATTGT 1589
|| ||||||||||| ||| |||||||||||||| || || ||||||||||||||||| ||
Sbjct 1558 GTATACAGAAACAT-AAAGCAGTATCCAGAGGCTTATACATACAACGGGATTGTGATAGT 1616
Query 1590 TCGAATCGATGCTCCCATTTATTTTGCCAACATAAGCTACATCAAGGACAGGCTACGAGA 1649
|||||||||| |||| ||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct 1617 TCGAATCGATTCTCCTATTTACTTTGCCAACATAAGTTACATCAAGGACAGACTACGAGA 1676
Query 1650 ATATGAAGTTGCTATCGACAAACACACAAGCAAGGGCCCAGATATGGAGAGGATCTACTT 1709
||||||||| ||| | ||||| |||||| | ||| | || |||| || || | ||
Sbjct 1677 ATATGAAGTAGCTGTTGACAAGTACACAAACCGGGGACTGGAGGTGGATAGAATAAATTT 1736
Query 1710 TGTTATCCTGGAAATGTCTCCTGTCACATACATCGACTCGAGCGCTGTAGAAGCTTTAAA 1769
||| ||| ||||||||||||| || ||| |||| || |||||||| || ||||| || ||
Sbjct 1737 TGTAATCTTGGAAATGTCTCCGGTTACACACATAGATTCGAGCGCGGTGGAAGCCTTGAA 1796
Query 1770 AGATTTGTA-CGAGGAGTATAAAACAAGGGGCATTCAGCTAGCGATTTCGAACCCAAACA 1828
||| |||| | || |||| |||||||||| ||||||||||||||| || ||||| ||||
Sbjct 1797 AGAACTGTATCAAG-AGTACAAAACAAGGGACATTCAGCTAGCGATATCAAACCCGAACA 1855
Query 1829 AAGAGGTTCTCTTGACTCTAGCAAGAGCAGGCATTGTGGAACTTA-TTGGCAAAGAATGG 1887
|||| |||| |||||| |||||||| |||| || ||||| || | ||||||||||||||
Sbjct 1856 AAGATGTTCACTTGACGATAGCAAGATCAGGAATGGTGGAGCT-AGTTGGCAAAGAATGG 1914
Query 1888 TTCTTCGTGAGAGTACATGACGCAGTCCAAGTTTGTGTTCATTACGT 1934
||||| |||||||| || ||||| || || || ||| | || |||||
Sbjct 1915 TTCTTTGTGAGAGTGCACGACGCCGTACAGGTGTGTCTACAATACGT 1961
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83950899980
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5