BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G13460.1 Length=2869 Score E Sequences producing significant alignments: (Bits) Value Ahg478733 jgi|Araly1|478733|fgenesh2_kg.3__1434__AT3G13460.1 4141 0.0 Ahg337630 jgi|Araly1|337630|fgenesh1_pg.C_scaffold_1004195 1112 0.0 > Ahg478733 jgi|Araly1|478733|fgenesh2_kg.3__1434__AT3G13460.1 Length=2912 Score = 4141 bits (2242), Expect = 0.0 Identities = 2715/2930 (93%), Gaps = 86/2930 (3%) Strand=Plus/Plus Query 7 AGGTGAGGTGGTTGATTAGTGGATCTATTTGAATCAGAGGGAGAGGTAGAGAGACAAAAC 66 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 AGGTGAGGTGGTTGATTCGTGGATCTATTTGAATCAGAGGGAGAGGCAGAGAGACAAAAC 60 Query 67 CCtttttttCCTCTTCCCCGAAGCAAAA--C--CCTTCTCCTTCTTGGCGGCTGCGGCCA 122 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 61 CCTTTTTTTCCTCTTCCCCGAAGCAAAACCCTTCCTTCTCCTTCTTGGCGGCTGCGGCCA 120 Query 123 tttttttcttctttc-tc-tcttctattctatctcttAAACCCTAGATTTGATCTGGGTT 180 |||| |||||| ||| || || ||| ||||||||||||||||||||||| |||||||||| Sbjct 121 TTTTCTTCTTC-TTCTTCTTC-TCTCTTCTATCTCTTAAACCCTAGATTCGATCTGGGTT 178 Query 181 TTTCCTGATTCCATTTAGGGtttctctatcttc----tttttt--ttcttcttct-tct- 232 |||||||||||| |||||||||||||||||||| |||||| |||||||||| ||| Sbjct 179 TTTCCTGATTCCGTTTAGGGTTTCTCTATCTTCTTTTTTTTTTACTTCTTCTTCTCTCTA 238 Query 233 tctttctctttGGTCGCATCCCCTTTTATCCGAGAAGGATCTATCCAAATCTTTGTTTGT 292 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 239 TCTTTCTTTTTGGTCGCATCCCCTTTTATCCGAGAAGGATCTATCC-AATCTTTGTTTGT 297 Query 293 CGAATCTCCTCTCATGGCTACCGTTGCTCCTCCTGCTGATCAAGCTACAGATCTGTTGCA 352 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 298 CGAATCTCGTCTCATGGCTACCGTTGCTCCTCCTGCTGATCAAGCTGCAGATCTGTTGCA 357 Query 353 GAAACTATCCTTGGACTCGCCAGCAAAAGCTTCAGAGATCCCTGAGCCTAACAAGAAGAC 412 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 358 GAAACTATCCTTGGACTCGCAATCAAAAGCTTCAGAGATCCCTGAGCCTAACAAGAAGAC 417 Query 413 TGCCGTCTACCAGTATGGAGGCGTTGATGTTCATGGTCAAGTTCCTTCTTATGATCGATC 472 ||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 418 TGCCGTCTATCAATATGGAGGCGTGGATGTTCATGGTCAAGTTCCTTCTTATGATCGATC 477 Query 473 TTTGACACCAATGCTTCCCAGTGATGCTGCTGACCCTTCAGTTTGCTATGTTCCTAATCC 532 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| Sbjct 478 TTTGACACCAATGCTTCCCAGTGATGCCGCTGACCCTTCAGTTTGCTATGTTCCCACTCC 537 Query 533 TTACAATCCCTACCAGTATTACAATGTATATGGGAGTGGTCAAGAGTGGACTGACTACCC 592 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | Sbjct 538 CTACAATCCCTACCAGTATTACAATGCATATGGGAGTGGTCAAGATTGGACTGACTACGC 597 Query 593 AGCTTACACAAATCCTGAGGGTGTTGACATGAATTCTGGAATTTATGGAGAGAATGGGAC 652 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 598 AGCTTACACCAATCCTGAGGGTGTTGACATGAATTCTGGAATTTATGGAGAGAATGGAAC 657 Query 653 TGTTGTGTATCCTCAGGGTTATGGGTATGCAGCGTATCCTTACTCGCCAGCAACTAGCCC 712 |||| |||||||||||||||||||||||||| | ||||||||||||||||| || ||||| Sbjct 658 TGTTCTGTATCCTCAGGGTTATGGGTATGCAACATATCCTTACTCGCCAGCGACAAGCCC 717 Query 713 TGCTCCACAGCTTGGCGGGGAAGGGCAGTTGTACGGTGCTCAGCAGTATCAGTATCCTAA 772 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 718 TGCTCCACAGCTTGGCGGGGAAGGGCAGTTGTATGGTGCTCAGCAGTATCAGTATCCTAG 777 Query 773 CTATTTTCCAAACAGTGGACCGTATGCTTCATCTGTGGCTACACCTACCCAGCCGGATCT 832 |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| Sbjct 778 CTATTTTCCAAACAGTGGACCGTATGCTTCATCTGTGGCTACTCCTAACCAGGCGGATCT 837 Query 833 CTCTGCAAACAAACCTGCTGGTGTGAAGACACTACCTGCGGATAGCAATAATGTTGCTTC 892 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 838 CTCTGCAAACAAAGCTGCTGGTGTGAAGACACTAACTGCGGATAGCAATAATGTTGCTTC 897 Query 893 TGCTGCTGGTATCACAAAAGGAAGTAATGGATCAGCTCCAGTGAAACCAACTAACCAGGC 952 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 898 TGCTACTGGTATCACAAAAGGAAGTAATGGATCAGCTCCAGTGAAACCAACTAACCAGAC 957 Query 953 TACCCTTAACACCTCAAGTAATTTGTATGGTATGGGTGCTCCAGGAGGAGGTTTGGCTGC 1012 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 958 TACACTTAACACCTCAAGTAATTTGTATGGTATGGGTGCTCCAGGAGGAGGTTTCGCTGC 1017 Query 1013 TGGTTATCAGGACCCCAGGTATGCCTATGAAGGGTATTATGCTCCTGTGCCGTGGCACGA 1072 |||||||||||| || ||||||| |||||| |||||||||||||||||||||||||| || Sbjct 1018 TGGTTATCAGGAGCCTAGGTATGGCTATGATGGGTATTATGCTCCTGTGCCGTGGCATGA 1077 Query 1073 TGGCTCTAAGTACTCTGATGTGCAGAGACCTGTTTCTGGTAGTGGAGTTGCATCCTCCTA 1132 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 TGGCTCTAAGTACTCAGATGTGCAGAGACCTGTTTCTGGTAGTGGAGTTGCATCCTCCTA 1137 Query 1133 TTCTAAGTCTAGCACAGTACCTTCATCGAGGAATCAAAACTACCGCTCAAATTCTCACTA 1192 ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| || Sbjct 1138 TTCTAAGTCTAGCACTGTACCTTCATCAAGGAATCAAAACTACCGCTCTAATTCTCATTA 1197 Query 1193 CACGAGCGTGCACCAGCCTTCATCAGTGACTGGCTATGGTACAGCTCAGGGGTACTACAA 1252 |||||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||| Sbjct 1198 CACGAGTATGCACCAGCCTGCATCAGTGACGGGCTATGGTACAGCTCAGGGATACTACAA 1257 Query 1253 CAGGATGTATCAGAACAAGTTATATGGTCAGTATGGTAGCACAGGGAGATCTGCTTTGGG 1312 |||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 1258 CAGGATGTATCAAAACAAGTTGTATGGTCAGTATGGTAGTACAGGGAGATCTGCTTTGGG 1317 Query 1313 TTATGGTTCATCTGGGTATGATTCAAGAACAAATGGAAGAGGATGGGCGGCCACAGACAA 1372 ||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 1318 TTATGGTTCTTCTGGGTATGATTCAAGAACCAATGGAAGAGGATGGGTGGCCACAGACAA 1377 Query 1373 CAAATACAGAAGCTGGGGCAGGGGTAACAGTTACTATTACGGAAATGAGAACAATGTAGA 1432 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1378 CAAATACAGAAGCTGGGGAAGGGGTAACAGTTACTATTACGGAAATGAGAACAATGTAGA 1437 Query 1433 TGGTTTGAATGAACTTAACAGGGGACCTAGAGCTAAGGGCACAAAGAACCAGAAGGGAAA 1492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 TGGTTTGAATGAACTTAACAGGGGACCTAGAGCTAAGGGCACAAAGAACCAGAAGGGAAA 1497 Query 1493 TCTAGATGATAGCTTAGAGGTTAAGGAGCAGACTGGAGAATCAAATGTAACTGAGGTTGG 1552 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1498 TCTAGATGATAGCTTAGAGGTTAAGGAGCAGACTGGAGAATCAAATGTAACCGAGGTTGG 1557 Query 1553 GGAGGCGGATAACACATGTGTTGTTCCTGACAGAGAACAGTACAATAAAGAAGATTTCCC 1612 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1558 GGAGGCAGATAACACATGTGTTGTTCCTGACAGAGAACAGTACAATAAAGAAGATTTCCC 1617 Query 1613 AGTGGATTATGCAAATGCCATGTTCTTTATCATCAAGTCATACAGTGAAGATGATGTGCA 1672 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1618 AGTGGATTATGCAAATGCCATGTTCTTTATCATCAAGTCGTACAGTGAAGATGATGTGCA 1677 Query 1673 CAAGAGCATTAAATATAATGTTTGGGCTAGCACACCAAATGGAAACAAGAAGCTTGCTGC 1732 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1678 TAAGAGCATTAAATATAATGTTTGGGCTAGCACACCAAATGGAAACAAGAAGCTTGCTGC 1737 Query 1733 AGCATACCAGGAAGCTCAACAGAAAGCTGGCGGCTGTCCCATCTTTCTGTTTTTCTCGGT 1792 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 1738 AGCATACCAGGAAGCTCAACAGAAAGCTGGGGGCTGTCCCATCTTTCTCTTTTTCTCGGT 1797 Query 1793 CAATGCAAGTGGACAATTTGTTGGTCTTGCTGAAATGACAGGACCAGTTGATTTCAACAC 1852 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1798 CAATGCAAGTGGACAATTTGTTGGTCTTGCTGAAATGACAGGACCAGTTGATTTCAACAC 1857 Query 1853 AAATGTGGAGTACTGGCAGCAAGATAAGTGGACCGGCTCTTTCCCCCTCAAGTGGCATAT 1912 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1858 AAATGTGGAGTACTGGCAGCAAGATAAGTGGACTGGCTCTTTCCCCCTCAAGTGGCATAT 1917 Query 1913 TGTGAAGGATGTGCCAAACAGTTTACTGAAGCATATTA-CTTTAGAGAACAATGAGAACA 1971 |||||||||||| ||||||||||| ||||| ||||||| | || |||||||||||||||| Sbjct 1918 TGTGAAGGATGTTCCAAACAGTTTGCTGAAACATATTACCCTT-GAGAACAATGAGAACA 1976 Query 1972 AACCTGTTACCAACAGCAGAGACACACAAGAGGTTAAGTTGGAGCAAGGTTTGAAGATTG 2031 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct 1977 AACCTGTTACCAACAGCAGAGACACACAAGAGGTTAAGCTGGAGCAAGGACTGAAGATTG 2036 Query 2032 TGAAAATTTTCAAGGAGCATAGCAGCAAGACTTGCATTTTGGATGATTTCTCATTCTACG 2091 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2037 TTAAAATTTTCAAGGAGCATAGCAGTAAGACTTGCATTTTGGATGATTTCTCATTCTACG 2096 Query 2092 AGGTTCGACAGAAGACTATCTT-G-G-AG-AAG-AAAGC---CA-AG---C----AA-AC 2134 |||||||||||||||||||||| | | || ||| |||| || || | || | Sbjct 2097 AGGTTCGACAGAAGACTATCTTGGAGAAGAAAGCCAAGCAAACACAGAAACAGGTAAGAA 2156 Query 2135 CCAG------AAA--CAG-----GTAAGCGAGGAGAAGGTAACCGATGAAAAGAAGGAAT 2181 | || ||| ||| || ||||| |||||| ||||||||||||| ||||||| Sbjct 2157 CTAGAAAAAAAAATTCAGAAATCGTCAGCGAAGAGAAGATAACCGATGAAAAAAAGGAAT 2216 Query 2182 CTGCAACTGCAGAGTCAGCGAGCAAGGAATCTCCTGCAGCTGTTCAAACGTCCAGTGATG 2241 |||||||||| || ||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 2217 CTGCAACTGCGGATTCAGCGAGCAAGGAATCTCCTTCAGCTGTTCAAACTTCCAGTGATG 2276 Query 2242 TTAAGGTTGCTGAGAATGGGTCTGTTGCTAAACCAGTCACAGGCGATGTGGTGGCAAATG 2301 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2277 TCAAGGTTGCTGAGAATGGGTCGGTTGCTAAACCAGTCACAGGCGATGTGGTGGCAAATG 2336 Query 2302 GTTGCTAACTAAGAGGATGGTGTCGCTCACGGCATGGGCATAAAACTGACTAGAGATGAA 2361 ||||||| || ||||||||| ||||||||||||||| ||||||||| ||| ||||| ||| Sbjct 2337 GTTGCTAGCTTAGAGGATGG-GTCGCTCACGGCATGAGCATAAAACGGACAAGAGACGAA 2395 Query 2362 GATATGAACAATCCCGTTTAAC-GTTTCTCTTGAGAAGAAGATTGCCGTGAGCCTTGAAG 2420 ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||| Sbjct 2396 GATATGAACAATCCCGTTT-ACAGTTTCTCTTGAGAAGAAGACTGCCGTGAGCCTTGAAG 2454 Query 2421 CATGGAAGGAGCTTTAGTACCTGAGACGGATCCGTTTCTTTGCCCTTAGAAGTTT-AAAT 2479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2455 CATGGAAGGAGCTTTAGTACCTGAGACGGATCCGTTTCTTTGCCCTTAGAAGTTTTAAAT 2514 Query 2480 CCCAGTTAtttttttttcaatcttttcttgttttcatttttccttttcttcAAAATCGCA 2539 ||||| |||||||||||||||| |||||||||||||||||||||| |||| ||||||||| Sbjct 2515 CCCAGCTATTTTTTTTTCAATCATTTCTTGTTTTCATTTTTCCTTATCTTTAAAATCGCA 2574 Query 2540 GTCTCGTTACAAGTTTATGTTGGGTT-TCTTTTTCATTTTCT-GTTGTTCCTACCCTGTA 2597 || |||||||||||||||||||| || | |||||| ||||| ||| | | | |||| Sbjct 2575 GTGTCGTTACAAGTTTATGTTGGTTTATTTTTTTC-TTTTCAAGTT-T-CATTTTCTGTT 2631 Query 2598 AAAATGCGCATAGGACCT--ACTAAATC-GTGGGAAGAATTAGAGAAAAGGAGATAAAAG 2654 | | | | || ||| | |||| ||||||||||||||||||||||||||||||| Sbjct 2632 GA--T-C-C-TAC--CCTGTAAAAAATTAGTGGGAAGAATTAGAGAAAAGGAGATAAAAG 2684 Query 2655 CAGGGTGGGAttttgttttttca-tgtctgttggatttttaggcagagtttt--c--ttt 2709 |||||||||||||||||||| || | |||||||||||| ||||| | ||||| | ||| Sbjct 2685 CAGGGTGGGATTTTGTTTTT-CAATTTCTGTTGGATTTATAGGCCGCGTTTTTTCAGTTT 2743 Query 2710 tc-ttt--tg-gtttcttgctttggtttcAGACTTGACTCTCTTGAGTCGTTTAGAATTT 2765 || ||| | |||||||| ||||||||||||||||||||| | |||| ||||||||| | Sbjct 2744 TCCTTTCATTTGTTTCTTGTTTTGGTTTCAGACTTGACTCTGTGGAGTTGTTTAGAATCT 2803 Query 2766 GAGATGGTCTTTTGCCTCTCTC-GTC-T-T----GTTTCTGTCATTCTCCAAAGTTATCT 2818 |||||||||||||||||||||| ||| | | |||| ||||||||||||||||||||| Sbjct 2804 GAGATGGTCTTTTGCCTCTCTCTGTCCTGTTTTTGTTTGTGTCATTCTCCAAAGTTATCT 2863 Query 2819 GAATCAATCCATGTTTTAAGATTTTCAAAGCAAGGAGATAAGTATTGTTG 2868 ||||| |||||||||| |||||||||||| ||||||||||||||||||| Sbjct 2864 GAATCGATCCATGTTT-AAGATTTTCAAAATAAGGAGATAAGTATTGTTG 2912 > Ahg337630 jgi|Araly1|337630|fgenesh1_pg.C_scaffold_1004195 Length=1761 Score = 1112 bits (602), Expect = 0.0 Identities = 988/1167 (85%), Gaps = 55/1167 (5%) Strand=Plus/Plus Query 988 GTGCTCCAGGAGGAGGT-TTGGCTGCTGGTTATCAGGACCCCAGGTATGCCTATGAAGGG 1046 |||||| ||||| ||| || ||||||||||||||||| ||||||||| ||||||| ||| Sbjct 530 GTGCTCTTGGAGGTGGTCTT-GCTGCTGGTTATCAGGATCCCAGGTATACCTATGATGGG 588 Query 1047 TATTATGCTCCTGTGCCGTGGCACGATGGCTCTAAGTACTCTGATGTGCAGAGACCTGTT 1106 | ||| ||| ||| | ||||||||||||||||| | ||| ||||||||||| ||||| Sbjct 589 TTTTACAATCCCGTGTCATGGCACGATGGCTCTAACTTCTCAGATGTGCAGAGGTCTGTT 648 Query 1107 TCTGGTAGTGGAGTTGCATCCTCCTATTCTAAGTCTAGC-AC-A-GTACCTTCATCGAGG 1163 |||| ||||||||||||||||| ||||||||| ||| | || | |||||| | || ||| Sbjct 649 TCTGCCAGTGGAGTTGCATCCTCATATTCTAAGGCTAACAACAATGTACCTGCGTCTAGG 708 Query 1164 AATCAAAACTACCGCTCAAATTCTCACTACACGAGCGTGCACCAGCCTTCAT-CAGTGAC 1222 ||||||||| | ||||| ||||| || ||||| || || |||||||| ||| || |||| Sbjct 709 AATCAAAACCATCGCTCCAATTCGCATTACACAAGTATGTACCAGCCTGCATCCA-TGAC 767 Query 1223 TGGCTATGGTACAGCTCAGGGGTACTACAACAGGA-TGTA-TCAGAACAAGTTATATGGT 1280 || ||| | |||||||||| |||||| ||| || |||| || ||||||| ||||||| Sbjct 768 AGGTTAT-G--CAGCTCAGGGTTACTACGACA-GAGTGTACCCA-AACAAGTCATATGGT 822 Query 1281 CAGTATGGTAGCACAGG-GAGATCTGCTTTGGGTTATGGTTCATCTGGGTATGATTCAAG 1339 |||||||||||||| || |||||||| | |||| |||||||| ||||| ||||||||||| Sbjct 823 CAGTATGGTAGCAC-GGTGAGATCTGGTATGGGCTATGGTTCTTCTGGATATGATTCAAG 881 Query 1340 AACAAATGGAAGAGGATGGGC-GGCCACAGACAACAAATACAGAAGCTGGGGCAGGGGTA 1398 |||||| | |||||||| ||| | | || || |||||||| |||||| |||| ||||||| Sbjct 882 AACAAACGAAAGAGGAT-GGCTGACTACGGAAAACAAATATAGAAGCCGGGGAAGGGGTA 940 Query 1399 ACAGTTACTAT-TACGGAAATGAGAACAATGTAGATGGTTTGAATGAACTTAACAGGGGA 1457 ||||||||| | || |||||||||||| || | ||||| |||||||||| |||||||| Sbjct 941 ACAGTTACT-TCTATGGAAATGAGAAC-AT-T-GATGGCCTGAATGAACTAAACAGGGGC 996 Query 1458 CCTAGAGCTAAGGGCACAAAGAACCAGAAGGGAAATC-TAGATGATAGCTT--A-GAGGT 1513 |||||||| |||||||| |||||||| || ||| | | |||| | |||||| | ||||| Sbjct 997 CCTAGAGCCAAGGGCACGAAGAACCA-AAAGGACACCATAGAGGTTAGCTTAGAGGAGGT 1055 Query 1514 TAAGGAGCAGAC--TGGA-GAATCAAATGTAACTGAGGTTGGGGAGGCGGATAACACATG 1570 || |||||||| | || |||||||| | ||||| |||| | | | | ||||| Sbjct 1056 GAAAGAGCAGACGTTTGATGAATCAAA--T-ACTGA------GGAGACTG-T-A-ACATG 1103 Query 1571 TGTTGTTCCTGACAGAGAACAGTACAATAAAGAAGATTTCCCAGTGGATTATGCAA-ATG 1629 ||| |||| || |||||| ||||||| | ||| ||||| ||||| || ||| || ||| Sbjct 1104 CGTTCTTCCAGATAGAGAAGAGTACAACAGAGACGATTTTCCAGTTGAGTAT-AAAGATG 1162 Query 1630 CCATGTTCTTTATCATCAAGTCATACAGTGAAGATGATGTGCACAAGAGCATTAAATATA 1689 | |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct 1163 CTATGTTCTTTATCATCAAGTCGTACAGTGAAGATGATGTGCATAAGAGCATCAAATATA 1222 Query 1690 ATGTTTGGGCTAGCACACCAAATGGAAACAAGAAGCTTGCTGCAGCATACCAGGAAGCTC 1749 |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||| Sbjct 1223 ATGTTTGGGCTAGCACCCCAAATGGAAACAAGAAGCTTGCTGCTGCATATCAGGAGGCTC 1282 Query 1750 AACAGAAAGCTGGCGGCTGTCCCATCT-TT-CTGTTTTTCTCGGTCAATGCAAGTGGACA 1807 | |||||| |||| ||||| ||| | | || || || |||||| |||| ||||||||||| Sbjct 1283 AGCAGAAATCTGGTGGCTG-CCC-TGTGTTCCTCTTCTTCTCGATCAACGCAAGTGGACA 1340 Query 1808 ATTTGTTGGTCTTGCTGAAATGACAGGACCAGTTGATTTCAACACA-AATGTGGAGTACT 1866 ||||||||| ||||| ||||||| |||||||||||||||||||| | ||| | ||||||| Sbjct 1341 ATTTGTTGGGCTTGCGGAAATGAAAGGACCAGTTGATTTCAACA-ATAATATTGAGTACT 1399 Query 1867 GGCAGCAAGATAAGTGGACCGGCTC-TTTCCCCCTCAAGTGGCATATTGTGAAGGATGTG 1925 |||| || ||||||||||| ||||| ||| |||||||||||||||||||||||||||||| Sbjct 1400 GGCAACAGGATAAGTGGACTGGCTCATTT-CCCCTCAAGTGGCATATTGTGAAGGATGTG 1458 Query 1926 CCAAACAGTTTACTGAAGCATATTACTTTAGAGAACAATGAGAACAAACCTGTTACCAAC 1985 || |||||||| || |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct 1459 CCCAACAGTTTGCTTAAGCATATTACTCTAGAGAACAATGAGAATAAACCTGTTACCAAC 1518 Query 1986 AGCAGAGACACACAAGAGGTTAAGTTGGAGCAAGGTTTGAAGATTGTGAAA-ATTTTCAA 2044 || ||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||| Sbjct 1519 AGTAGAGACACACAAGAGGTTAAGTTGGAGCAGGGTTTGAAGGTTGT-AAAGATTTTCAA 1577 Query 2045 GGAGCATAGCAGCAAGACTTGCATTTTGGATGATTTCTCATTCTACGAGGTTCGACAGAA 2104 |||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||| || Sbjct 1578 GGAGCATACCAGCAAGACATGCATTTTGGATGATTTCTCGTTCTACGAGGCTCGACAAAA 1637 Query 2105 GACTATCTTGGAGAAGAAAGCCAAGCA 2131 |||||| |||||||||||||| ||||| Sbjct 1638 GACTATTTTGGAGAAGAAAGCTAAGCA 1664 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 108290566535 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5