BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G13690.1
Length=3321
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478767 jgi|Araly1|478767|fgenesh2_kg.3__1468__AT3G13690.1 4377 0.0
Ahg474575 jgi|Araly1|474575|fgenesh2_kg.1__4529__AT1G55200.1 427 2e-118
> Ahg478767 jgi|Araly1|478767|fgenesh2_kg.3__1468__AT3G13690.1
Length=3216
Score = 4377 bits (2370), Expect = 0.0
Identities = 2639/2765 (95%), Gaps = 33/2765 (1%)
Strand=Plus/Plus
Query 546 AGAAGAGGTCCTGTCATGTCTATGAGTTTTGTATTCA--T-CTGAAAGGTCTTACTGGAA 602
|||||||||| |||||||||||||||||||||||||| | ||| ||||||||||||| |
Sbjct 475 AGAAGAGGTCTTGTCATGTCTATGAGTTTTGTATTCATCTGCTGCAAGGTCTTACTGGGA 534
Query 603 TGACTTATCAAAGGGGAGAGTCTTTGGTTCCTGTCTTGATTTCCAACTTGGTGGGGGCAT 662
||||| |||||||| ||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 535 TGACTAATCAAAGGAGAGAGTCTTTGGTTCTTGTCTTGATTTTCAACTTGGTGGGGGCAT 594
Query 663 AGGCCAAATAATGCAAACCTAAAATCCTTGTTTCTTCCAGAATCTTGTGAGCTTTTTAAT 722
|| |||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||
Sbjct 595 AGCCCAAATAATGCATTGCTAAAATCCTTGTATCTTCCACAATCTTGTGAGCTTTTTTAT 654
Query 723 CTCTCCAAC-AAAGTACAATTTCTCTGAGGATTGTG---TTATTACACAGAGAAAACAAA 778
||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||
Sbjct 655 CTCTCCAACAAAAGTACAATTTCTCTGAGGATTGTGCTATTTTTATACAGAGAAAACAAA 714
Query 779 AAGAGGGTCCAAGAAAATCTCTTGCATTCTCTTCTCCTCTCTCTGGTATTGGTATCTTCA 838
||||||||||||| |||||||||||| | | |||||||||||||||
Sbjct 715 AAGAGGGTCCAAG-AAATCTCTTGCA---------------T-T-GTATTGGTATCTTCA 756
Query 839 AATGAGTCGACTACAGAAGCGAGGGAAACAGGAAAAGCCTGTTGTATCTGATGGAGCTCA 898
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |
Sbjct 757 AATGAGTCGACTACAGAAGCGAGGGAAACAGGAAAAGCCTGTAGTTTCTGATGGAGCTGA 816
Query 899 AAAGGTTATTGTTGCTGTTAAAGCATCTAGGGAGATTCCAAAGACTGCCTTGATTTGGGC 958
|||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 817 AAAGGTTATTGTCGCTGTTAAAGCCTCTAGGGAGATTCCAAAGACAGCCTTGATTTGGGC 876
Query 959 TTTGACTCATGTTGTTCAGCCTGGGGATTGCATTACCCTTATTGTTGTTGTCCCTTCTCA 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 877 TTTGACTCATGTTGTTCAGCCTGGGGATTGCATTACCCTTATTGTTGTTGTCCCTTCTCA 936
Query 1019 CAACTCCGGACGAAAACTTTGGGGTTTCACTAAGAGTTTCCCTATGTTTGCTGGGGATTG 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 937 CAACTCCGGACGAAAACTTTGGGGTTTCACTAAGAGTTTCCCTATGTTTGCTGGGGATTG 996
Query 1079 TGCAAGTGGTCATCGGAAATCACATTCTGAAGCACTACCGGAGATTAAAAGTGATCTCAC 1138
||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct 997 TGCAAGTGGTCATCGGAAATCTCATTCTGAAGCACTACCAGAGATCAAAAGTGATCTCAC 1056
Query 1139 TGACACTTGTTCCCAAATGATTCTCCAGCTTCATGATGTCTATGACCCGAATAAGATAAA 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1057 TGACACTTGTTCCCAAATGATTCTCCAGCTTCATGATGTCTATGACCCGAATAAGATAAA 1116
Query 1199 TGTCAAGATTAAGATTGTTTCTGGATCACCCTGTGGAGCAGTTGCTGCTGAGTCGAAGAA 1258
||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct 1117 TGTCAAGATTAAGATTGTTTCTGGATCCCCCTGCGGAGCAGTTGCAGCTGAGTCGAAGAA 1176
Query 1259 AGCGCAAGCGAACTGGGTAGTAATGGACAAACACCTCAAGCAGGAAGAGAAACGGTGTAT 1318
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1177 AGCGCAAGCAAACTGGGTAGTAATGGACAAACACCTCAAGCAGGAAGAGAAACGATGTAT 1236
Query 1319 GGATGAATTGCAATGCAACATTGTGGTGATGAAGCGTTCGCAGGCAAAAGTTCTACGCTT 1378
||||||| ||||||| || |||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1237 GGATGAACTGCAATGTAATATTGTGGTGATGAAGCGTTCTCAGGCAAAAGTCCTACGCTT 1296
Query 1379 AAACCTTG-TTGGATCTCCTAAGAAAGATGCTGGAAAAGAGTGTCCCTTACCATCTGGAC 1437
|||| ||| ||||||| |||| ||||||||||| |||||||| |||||||| ||||||||
Sbjct 1297 AAAC-TTGGTTGGATCGCCTAGGAAAGATGCTGAAAAAGAGTCTCCCTTACTATCTGGAC 1355
Query 1438 CAGAAGCAGCATCTGAGAAACACTCAAAGAACACTAAAGGATTGTTAGATGCTGATAGAG 1497
||||||| ||||||||| ||||| | || ||||||||||||| ||||||| |||||||||
Sbjct 1356 CAGAAGCTGCATCTGAGGAACACACGAACAACACTAAAGGATCGTTAGATTCTGATAGAG 1415
Query 1498 GACTACCTGTCACTCCTACTAGCAGCCCTGAGCTGGGGACACCGTTCACAAGTACAGAAG 1557
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1416 GACTACCTGTCACTCCTACTAGTAGCCCTGAGCTGGGGACACCATTCACAAGTACAGAAG 1475
Query 1558 CCGGGACTTCATCTGTGTCGAGCTCCGACCTGGGAACTTCACCTTTCTTCACATTGGGAA 1617
||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1476 CCGGGACTTCATCAGTGTCGAGCTCTGACCTGGGAACTTCACCTTTTTTCACATTGGGAA 1535
Query 1618 TGAACGGATACATGAAGAAGGATGGAGCATTGGTGATCAAGGAGAATGATGGTCTTGATG 1677
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1536 TGAGCGGATACATGAAGAAGGATGGAGCATTGGTGATCAAGGAGAATGATGGTCTTGATG 1595
Query 1678 ATTCTGGCTCTGAAACAGAGAGTGAAAACCAATCATTAGCGTCAACGAGTATGAGATTCC 1737
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1596 ATTCTGGCTCTGAAACAGAGAGCGAAAACCAATCATTAGCGTCAACGAGTATGAGATTCC 1655
Query 1738 AGCCATGGATATCAGAATATATTGGCACCCATCGCCACTCATCCCAGGAGGCCGAAGAAA 1797
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1656 AGCCATGGATATCTGAATATATTGGCACCCATCGCCACTCATCCCAGGAGGCCGAAGAAA 1715
Query 1798 GCTTATTATGGAAAAATGATGACAGGGCACAAATATCCACTACAAAGGCTTTGCTTGAAA 1857
|| ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1716 GCCTAT---GGAAAAACGATGACAGGGCTCAAATATCCACTACAAAGGCTTTGCTTGAGA 1772
Query 1858 AGTTCTCTAAACTTGATGTTGAAGTTGGGTTGTCGTCTAGTCGAAGGATGGATTTAGAGT 1917
|||| |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||
Sbjct 1773 AGTTTTCTAAACTTGATGTTGAAACTGGGTTTTCGTCTAGTCGAAGGATTGATTTAGAGT 1832
Query 1918 TTAGTGGAAACGTAAGAGATGCAATATCACTCTCTCGAAGTGCTCCTCCTGGTCCACCTC 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1833 TTAGTGGAAACGTAAGAGATGCAATATCACTCTCTCGAAGTGCTCCTCCTGGTCCACCTC 1892
Query 1978 CTCTCTGTTCAATTTGCCAGCACAAGGCGCCAGTATTTGGGAAACCCCCAAGGCTGTTTA 2037
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1893 CTCTCTGTTCTATTTGCCAGCACAAGGCGCCAGTATTTGGGAAACCACCAAGGCTGTTTT 1952
Query 2038 CATACGCTGAATTAGAGCTTGCAACGGGTGGGTTTTCACAGGCTAACTTCTTGGCTGAGG 2097
|||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1953 CATATGCTGAGTTAGAGCTTGCAACAGGTGGGTTTTCACAGGCTAACTTCTTGGCTGAGG 2012
Query 2098 GTGGTTATGGATCTGTTCATCGGGGTGTGCTACCAGAAGGCCAGGTAGTTGCAGTAAAGC 2157
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2013 GTGGGTATGGATCTGTTCATCGGGGTGTGCTACCGGAAGGCCAGGTAGTTGCAGTAAAGC 2072
Query 2158 AACACAAATTGGCCAGTTCTCAAGGAGATGTAGAGTTTTGCTCCGAAGTGGAAGTTCTCA 2217
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AACACAAACTGGCCAGCTCTCAAGGAGATGTAGAGTTTTGCTCCGAAGTGGAAGTTCTCA 2132
Query 2218 GCTGTGCTCAGCACAGAAACGTCGTTATGCTAATTGGTTTCTGCATTGAAGACAGCAGAC 2277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2133 GCTGTGCTCAGCACAGAAACGTCGTTATGCTAATTGGTTTCTGCATTGAAGACAGCAGAC 2192
Query 2278 GGCTCTTGGTCTATGAATACATTTGCAATGGTTCACTTGACTCTCATCTATACGGTCGTC 2337
|||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 2193 GGCTGTTGGTCTATGAATACATATGCAATGGTTCACTTGACTCACATCTATACGGTCGTC 2252
Query 2338 AAAAGGAAACTCTGGAATGGCCAGCACGGCAAAAGATTGCTGTTGGAGCTGCAAGAGGTC 2397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2253 AAAAGGAAACTCTGGAATGGCCAGCACGGCAAAAGATTGCTGTTGGAGCTGCAAGAGGTC 2312
Query 2398 TTCGGTATCTTCACGAAGAGTGCAGAGTTGGCTGTATTGTCCACAGAGACATGCGTCCTA 2457
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2313 TTCGGTATCTTCACGAAGAGTGCAGAGTTGGCTGTATTGTCCACCGAGACATGCGTCCTA 2372
Query 2458 ACAACATCCTCATCACTCATGATAATGAGCCACTGGTTGGAGATTTTGGTCTAGCAAGAT 2517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2373 ACAACATCCTCATCACTCATGATAATGAGCCACTGGTTGGAGATTTTGGTCTAGCAAGAT 2432
Query 2518 GGCAGCCTGATGGGGAAATGGGTGTAGATACACGAGTGATAGGAACCTTCGGCTATCTAG 2577
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2433 GGCAGCCTGATGGGGAACTGGGTGTAGATACACGAGTGATAGGAACCTTCGGCTATCTAG 2492
Query 2578 CTCCCGAATATGCTCAAAGCGGGCAAATCACAGAAAAAGCTGATGTCTACTCGTTCGGGG 2637
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2493 CTCCAGAATATGCTCAAAGCGGGCAAATCACAGAAAAAGCTGATGTCTACTCGTTCGGGG 2552
Query 2638 TTGTTCTAGTTGAGCTAGTCACTGGCCGCAAAGCCATTGATATCACCAGGCCGAAAGGCC 2697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2553 TTGTTCTAGTTGAGCTAGTCACTGGCCGCAAAGCCATTGATATCACCAGGCCGAAAGGCC 2612
Query 2698 AGCAATGCCTGACTGAATGGGCACGTCCTCTACTGGAAGAATATGCGATAGATGAACTTA 2757
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2613 AGCAATGCCTCACTGAATGGGCACGTCCTCTACTGGAAGAATATGCGATAGACGAACTTA 2672
Query 2758 TCGATCCGAGGCTTGGGAACCGTTTTGTAGAAAGTGAGGTCATTTGTATGCTTCATGCAG 2817
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2673 TCGATCCGAGGCTTGGGAACCATTTTGTAGAAAGTGAGGTCATTTGTATGCTTCATGCAG 2732
Query 2818 CTTCGTTGTGCATACGTAGAGATCCACATTTGAGGCCACGCATGTCTCAGGTGTTGCGTA 2877
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2733 CTTCATTGTGCATACGTAGAGATCCACATTTGAGGCCACGCATGTCTCAGGTGTTGCGTA 2792
Query 2878 TACTGGAAGGAGATATGATAATGGATGGAAACTACGCATCAACTCCAGGTTCAGAGGCAG 2937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2793 TACTGGAAGGAGATATGATAATGGATGGAAACTACGCATCAACTCCAGGTTCAGAGGCAG 2852
Query 2938 GCAACCGAAGCGGGAGGTTCTGGGCGGATCATTACAGCGGTCAGCTAACGAATGATGGCT 2997
||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 2853 GCAACAGAAGCGGGAGGTTCTGGGTGGATCATTACAGCGGTCAGCTAACGAATGATGGGT 2912
Query 2998 CGGATAGGTTCAGTGAAAGGCTGTCTGTTGAAACGCCAAGACTAGCTTTGAGGGAGAGGG 3057
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2913 CGGATAGGTTCAGTGAAAGGCTGTCCGTTGAAACGCCAAGACTAGCTTTGAGGGAGAGGG 2972
Query 3058 AAAGAAGCCAGAGGTTTGAACTAAACCATAACAAGCAATACTAATCACACTACTTTG-CT 3116
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 2973 AAAGAAGCCAGAGGTTTGAACTAAACCATAACAAGCAATACTAATCACACAACTTTGGCT 3032
Query 3117 TTATGATAAGTTTAGTTGATAGGGTATTTAGTAAAGTCCTCTGTTTTAAGTGATGTGGTC 3176
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3033 T-ATGATAAGTTTAGTTGATAGGGTATTTAGTAAAGTCCTCTGTTTTAAGTAATGTGGTC 3091
Query 3177 CAAAGCTGGCAACACAGCtttttttGTTTGTATAGTGGGGTAAGATGCAAAAACAGTTGC 3236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3092 CAAAGCTGGCAACACAGCTTTTTTTGTTTGTATAGTGGGGTAAGATGCAAAAACAGTTGC 3151
Query 3237 TAAATATGTTATCAAGGAATTTAAAATTGTTTTTGGTAAAGG-AGTATTAAAAGAACAAA 3295
||||||||||||||||| |||| ||||||||||||||||||| | |||||||||||||||
Sbjct 3152 TAAATATGTTATCAAGGTATTTTAAATTGTTTTTGGTAAAGGGATTATTAAAAGAACAAA 3211
Query 3296 ACAAC 3300
|||||
Sbjct 3212 ACAAC 3216
Score = 582 bits (315), Expect = 5e-165
Identities = 439/493 (89%), Gaps = 32/493 (6%)
Strand=Plus/Plus
Query 1 AGAAGATGGTAATTTTGTTGTTACTACAAAGCAACACAGAAGCAAAGAGAGACTAGTAGA 60
||||||| |||||||||||| ||||||||||||||||||||||||||||||| | ||||
Sbjct 1 AGAAGATAGTAATTTTGTTGCTACTACAAAGCAACACAGAAGCAAAGAGAGA-GACTAGA 59
Query 61 CTAGAGAAGaaaaaccaaaaaccctaaaaaaagaaaaaG-AGAGAGATTGTTTTCACATT 119
||| || |||||||||||||||||| |||||| |||||| ||| || ||||||||||||
Sbjct 60 CTAAAGCAGAAAAACCAAAAACCCT-AAAAAA-AAAAAGAAGA-AGCCTGTTTTCACATT 116
Query 120 TTCGCGGTTTTCTTCTTCTCCTTGTATTTATCTCTGAAGTCGTGCTTTTGATGTGAAAGG 179
||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 117 TTCGCGG--CT-TTCTTCTCCTTGTATTTATCTCTGAAGTCGTGC-ATTGATGTGAAAGG 172
Query 180 AGAAGAAGCTTGAAGACAGACAACTTTAAAGTTGACGAAACCAATGCTTCTGGTGAAGTT 239
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 173 AGAAGAAGCTTGAAGACAGACAAAATTAAAGTTGACGAAACCAATGCTTCTGGTGAAATT 232
Query 240 TTGAGCTTTTGAGCGATCTTTTGGGTCTTGCTCTTGCTCTTGAGGCAGAGAACCCATAGA 299
||||||||| |||||||| || | ||| |||||||||||||||||||||| | |||
Sbjct 233 TTGAGCTTTAGAGCGATC--TT---T-TTGGTCTTGCTCTTGAGGCAGAGAACTC--AGA 284
Query 300 CAGTTGTTTTGTCTGTTTGTTGGTGTCAGATCCAAAATCAAGAGGCTGTTATAGCTTTGA 359
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 285 CAGTT-TTTTGTCTGTTTGTTGGTGTCAGATCCAAAATCAAGAGGCTGTAATAGCTTTGA 343
Query 360 CTTGGAAGTGATTTGACACAATGAAGGAAGAAGATTCaaaaaaa--aTAAG------AG- 410
||| ||||||||||||||||| ||||||||||||||||||||| || | ||
Sbjct 344 CTTAGAAGTGATTTGACACAAGGAAGGAAGAAGATTCAAAAAAGTGATTGGGTTTTGAGA 403
Query 411 GG-TAGGAATCTATTTGGTCGCTTTTGCTTCCTCCTATTCTGGGGAGAATTT-GGGATCT 468
|| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 404 GGATAGGAATCTATTTGGTCGCTTTTGCTTCCTCCTATTCTGGGGA-AATTTTGGGATCT 462
Query 469 TGGAGTT-GAATC 480
||| ||| |||||
Sbjct 463 TGG-GTTTGAATC 474
> Ahg474575 jgi|Araly1|474575|fgenesh2_kg.1__4529__AT1G55200.1
Length=2206
Score = 427 bits (231), Expect = 2e-118
Identities = 407/490 (83%), Gaps = 19/490 (4%)
Strand=Plus/Plus
Query 900 AAGGTTATTGTTGCTGTTAAAGCATCTAGGGAGATTCCAAAGACTGCCTTGATTTGGGCT 959
|||||| ||||||||||||||||||||||||||||| ||||||| || ||| ||||||||
Sbjct 55 AAGGTTCTTGTTGCTGTTAAAGCATCTAGGGAGATTTCAAAGACAGCATTGGTTTGGGCT 114
Query 960 TTGACTCATGTTGTTCAGCCTGGGGATTGCATTACCCTTATTGTTGTTGTCCCTTCTCAC 1019
||||||||| ||||||| ||||| ||||||||||| || |||||||||||| |||||||
Sbjct 115 TTGACTCATATTGTTCATCCTGGAGATTGCATTACTCTGATTGTTGTTGTCACTTCTCAT 174
Query 1020 AACT-CCGGACGAAAACTTTGGGGTTTCACTAAGAGTTTCCCTATGTTTGCTGGGGATTG 1078
|| | | || ||||| || | || || |||||| | ||| ||||| |||||
Sbjct 175 AA-TGCTGGCCGAAAGCTAT--GG----AC------TTTCCCGAGGTTCGCTGGAGATTG 221
Query 1079 TGCAAGTGGTCATCGGAAATC-ACATTCTGAAGCACTACCGGAGATTAAA-AGTGATCTC 1136
||| | ||||||||||||| | |||||||| ||| | || |||| |||| |||||||||
Sbjct 222 TGCTACTGGTCATCGGAAA-CTGCATTCTGATGCAATTCCTGAGA-TAAAGAGTGATCTC 279
Query 1137 ACTGACACTTGTTCCCAAATGATTCTCCAGCTTCATGATGTCTATGACCCGAATAAGATA 1196
||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| |
Sbjct 280 ACTGATACTTGTTCCCAAATGATTCTCCAGCTTCATGATGTCTATGATCCAAACAAGGTT 339
Query 1197 AATGTCAAGATTAAGATTGTTTCTGGATCACCCTGTGGAGCAGTTGCTGCTGAGTCGAAG 1256
||||||| ||| |||||||||||||||||||| |||||||| ||||| |||||| | |||
Sbjct 340 AATGTCAGGATCAAGATTGTTTCTGGATCACCATGTGGAGCTGTTGCGGCTGAGGCCAAG 399
Query 1257 AAAGCGCAAGCGAACTGGGTAGTAATGGACAAACACCTCAAGCAGGAAGAGAAACGGTGT 1316
||| | ||||| || |||||||| |||| || ||||| |||| ||| ||||||||||
Sbjct 400 AAATCACAAGCAAATTGGGTAGTTCTGGATAAGCACCTTGAGCATGAAAAGAAACGGTGC 459
Query 1317 ATGGATGAATTGCAATGCAACATTGTGGTGATGAAGCGTTCGCAGGCAAAAGTTCTACGC 1376
|| ||||| | ||||| |||||||||| ||||||||||| ||||||||| |||| |||
Sbjct 460 ATAGATGAGCTACAATGTAACATTGTGGCAATGAAGCGTTCTCAGGCAAAATTTCTGCGC 519
Query 1377 TTAAACCTTG 1386
|| ||| |||
Sbjct 520 TTGAAC-TTG 528
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 125361645462
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5